CmoCh13G003260 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G003260
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	exopolygalacturonase-like
Location	Cmo_Chr13: 4042928 .. 4043952 (+)
RNA-Seq Expression	CmoCh13G003260
Synteny	CmoCh13G003260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTTAGCAAATGCATGGAAGGATGCATGCACGTCCAATCGTTCTAGTGCGATTGTTATTCCGGGAGGGATATTTAAAGTAAAGGAAGGGATATTTAAAGGACCTTGTAATAGCCCAATTGACTTTCAACTTGGAGGAACATTGCAGGCACCAAAAAGTCTTCAGGGAAATAATTGGATTACTTTTGAACGTATTGATAGATTGACATTATCAGGTGAAGGAGTTTTTGATGGCCAAGGAAAGGCAGCTTGGAAAAAGAATGATTGCCATAAACGCATAAATTGTGCCCAACTCCCCATTGTAAGCAATATTCCTTCAGCTTTCCTTCTCAATCTCGGGAATCTTGTTGTTTTTAGGCATCTTCTCTAATCTTCTAACATTTTTAATTTGGTAAAGGTTCTTCATTTTCTAGAGGATTATCTTTAACCATTCTAACAAAAAAGAAAAAAAAGAAAAAAGCATGTAAAGGAGTGAAATTCTTTATGAGTTTTCGATTTTATTGGGTTCTGTTAAATTTTTTTGGCTTCCTTACTGATGCTCACAAAATATTATTTGATTATACAAAATGTTTAGAGTTTGAGGTTCAACTTCATCACCAATTCAATCGTGAAGAGAATAACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAACTGCACCAGAAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAGGATCGCAATCACAATGTCCAAAATTGCAACAGGAGATGATTGCATTTCTCTTGGAGATGGAAGCAAACAAATTAACATCACCAACGTGACATGTGGGCCAGGACATGGCGTAAGCATCGGAAGTCTTGGAAGATACACTAACGAAGAACCCGTTGAAGGTGTCATCGTAAATAACTGTAAGCATCGGAAGTCTTGGAAGATACACTAACGAAGAACCCGTTGAAGGTGTCATCGTAAATAACTGCACGATAATTAACACCACTAATGGTGTTAGGA

mRNA sequence

GCTTTAGCAAATGCATGGAAGGATGCATGCACGTCCAATCGTTCTAGTGCGATTGTTATTCCGGGAGGGATATTTAAAGTAAAGGAAGGGATATTTAAAGGACCTTGTAATAGCCCAATTGACTTTCAACTTGGAGGAACATTGCAGGCACCAAAAAGTCTTCAGGGAAATAATTGGATTACTTTTGAACGTATTGATAGATTGACATTATCAGGTGAAGGAGTTTTTGATGGCCAAGGAAAGGCAGCTTGGAAAAAGAATGATTGCCATAAACGCATAAATTGTGCCCAACTCCCCATTAGTTTGAGGTTCAACTTCATCACCAATTCAATCGTGAAGAGAATAACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAACTGCACCAGAAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAGGATCGCAATCACAATGTCCAAAATTGCAACAGGAGATGATTGCATTTCTCTTGGAGATGGAAGCAAACAAATTAACATCACCAACGTGACATGTGGGCCAGGACATGGCGTAAGCATCGGAAGTCTTGGAAGATACACTAACGAAGAACCCGTTGAAGGTGTCATCGTAAATAACTGA

Coding sequence (CDS)

GCTTTAGCAAATGCATGGAAGGATGCATGCACGTCCAATCGTTCTAGTGCGATTGTTATTCCGGGAGGGATATTTAAAGTAAAGGAAGGGATATTTAAAGGACCTTGTAATAGCCCAATTGACTTTCAACTTGGAGGAACATTGCAGGCACCAAAAAGTCTTCAGGGAAATAATTGGATTACTTTTGAACGTATTGATAGATTGACATTATCAGGTGAAGGAGTTTTTGATGGCCAAGGAAAGGCAGCTTGGAAAAAGAATGATTGCCATAAACGCATAAATTGTGCCCAACTCCCCATTAGTTTGAGGTTCAACTTCATCACCAATTCAATCGTGAAGAGAATAACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAACTGCACCAGAAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAGGATCGCAATCACAATGTCCAAAATTGCAACAGGAGATGATTGCATTTCTCTTGGAGATGGAAGCAAACAAATTAACATCACCAACGTGACATGTGGGCCAGGACATGGCGTAAGCATCGGAAGTCTTGGAAGATACACTAACGAAGAACCCGTTGAAGGTGTCATCGTAAATAACTGA

Protein sequence

ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN

Homology

[Close]

BLAST of CmoCh13G003260 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.7e-69
Identity = 128/221 (57.92%), Postives = 157/221 (71.04%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQA---PKSLQGN 60
           AL  AWK+AC S   S I++P G F V     +GPC S I  QL GTL+A   P  ++G 
Sbjct: 5   ALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGL 64

Query: 61  NWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKR-INCAQLPISLRFNFITNSIVKRIT 120
            WI   +ID LT+ G GVFDGQGK+AW +NDCHK    C  L ++LR   +TNSI++ +T
Sbjct: 65  GWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVT 124

Query: 121 SLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISL 180
           +LDSKNFH+NV+GC NLTF    I+A E S NTDGIHIGRS+ + I  ++I TGDDCISL
Sbjct: 125 TLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISL 184

Query: 181 GDGSKQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           GDGSK INITN+TCGPGHG+S+GSLGRY NEE V G+ V N
Sbjct: 185 GDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKN 225

[Close]

BLAST of CmoCh13G003260 vs. ExPASy Swiss-Prot
Match: P35337 (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.0e-63
Identity = 114/219 (52.05%), Postives = 150/219 (68.49%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NN 60
           A+  A+  AC +   S ++IP G FK+ E +  GPC SPI+F L G ++    S QG + 
Sbjct: 38  AVLKAFTSACQAPAPSQVLIPKGDFKLGETVMTGPCKSPIEFTLQGNVKTDGGSTQGKDR 97

Query: 61  WITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSL 120
           W+ FE+I+   L+G G FDG+G AAWK N+CHK   C +LPIS+RF+F+ N+ +K +TSL
Sbjct: 98  WVVFEKINGFKLNGGGTFDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSL 157

Query: 121 DSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGD 180
           D+KNFH NV+   N+TF NI I AP  SPNTDGIH+GR   + I  +KIATGDDCIS+GD
Sbjct: 158 DAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGD 217

Query: 181 GSKQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           G K + I  V CGPGHG+S+GSLGRY  E+ V  + V N
Sbjct: 218 GMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKN 256

[Close]

BLAST of CmoCh13G003260 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.0e-63
Identity = 113/219 (51.60%), Postives = 152/219 (69.41%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPC-NSPIDFQLGGTLQA---PKSLQG 60
           A+  AWK AC S   S ++IP G + + E   +GPC  S I FQ+ G ++A   P   + 
Sbjct: 26  AVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKIGFQIDGVVKAPADPSKFKS 85

Query: 61  NNWITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRIT 120
           + W++F RID LT+SG G  DGQG+ AW KN+C K  NC    ++LRF+F+ +++V+ IT
Sbjct: 86  DGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFLKHAMVRDIT 145

Query: 121 SLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISL 180
           SL+SK FHINVL C ++TF ++ +TAP  S NTDGIH+G S  + IT +KIATGDDCIS+
Sbjct: 146 SLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISI 205

Query: 181 GDGSKQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIV 216
           G GS+ + IT V CGPGHG+SIGSLGRY NE+ V G+ V
Sbjct: 206 GPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITV 244

[Close]

BLAST of CmoCh13G003260 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.0e-63
Identity = 106/217 (48.85%), Postives = 153/217 (70.51%), Query Frame = 0


Query: 4   NAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQA---PKSLQGNNWI 63
           +AWK+AC S   S +VIP G + + +   +GPC +PI+  + GT+QA   P + +  NW+
Sbjct: 51  DAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWV 110

Query: 64  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 123
            F  ++   + G G+FDGQG  A++KN C  R   ++LP+++RF+F+TN++++ ITS DS
Sbjct: 111 RFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDS 170

Query: 124 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 183
           K FHINV  C N+T   + I AP+ SPNTDGIH+G+S  + I  S I TGDDCIS+GDG+
Sbjct: 171 KLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGT 230

Query: 184 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           K + I  +TCGPGHG+SIGSLG++ NEEPVEG+ ++N
Sbjct: 231 KNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISN 267

[Close]

BLAST of CmoCh13G003260 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 5.2e-63
Identity = 106/217 (48.85%), Postives = 153/217 (70.51%), Query Frame = 0


Query: 4   NAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQA---PKSLQGNNWI 63
           +AWK+AC S   S +VIP G + + +   +GPC +PI+  + GT+QA   P + +  NW+
Sbjct: 51  DAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWV 110

Query: 64  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 123
            F  ++   + G G+FDGQG  A++KN C  R   ++LP+++RF+F+TN++++ ITS DS
Sbjct: 111 RFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDS 170

Query: 124 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 183
           K FHINV  C N+T   + I AP+ SPNTDGIH+G+S  + I  S I TGDDCIS+GDG+
Sbjct: 171 KLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGT 230

Query: 184 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           K + I  +TCGPGHG+SIGSLG++ NEEPVEG+ ++N
Sbjct: 231 KNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISN 267

[Close]

BLAST of CmoCh13G003260 vs. ExPASy TrEMBL
Match: A0A6J1EHN0 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434259 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.2e-123
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60
           ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI
Sbjct: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60

Query: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120
           TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS
Sbjct: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120

Query: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180
           KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS
Sbjct: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180

Query: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN
Sbjct: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 217

[Close]

BLAST of CmoCh13G003260 vs. ExPASy TrEMBL
Match: A0A6J1EHA1 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434295 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.6e-123
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60
           ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI
Sbjct: 50  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 109

Query: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120
           TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS
Sbjct: 110 TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 169

Query: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180
           KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS
Sbjct: 170 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 229

Query: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           KQINITNVTCGPGHG+SIGSLGRYTNEEPVEGVIVNN
Sbjct: 230 KQINITNVTCGPGHGISIGSLGRYTNEEPVEGVIVNN 266

[Close]

BLAST of CmoCh13G003260 vs. ExPASy TrEMBL
Match: A0A6J1F4C6 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111440472 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.6e-123
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60
           ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI
Sbjct: 50  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 109

Query: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120
           TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS
Sbjct: 110 TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 169

Query: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180
           KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS
Sbjct: 170 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 229

Query: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           KQINITNVTCGPGHG+SIGSLGRYTNEEPVEGVIVNN
Sbjct: 230 KQINITNVTCGPGHGISIGSLGRYTNEEPVEGVIVNN 266

[Close]

BLAST of CmoCh13G003260 vs. ExPASy TrEMBL
Match: A0A6J1F1K6 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438524 PE=3 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 4.6e-123
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60
           ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI
Sbjct: 50  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 109

Query: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120
           TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLP SLRFNFITNSIVKRITSLDS
Sbjct: 110 TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPFSLRFNFITNSIVKRITSLDS 169

Query: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180
           KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS
Sbjct: 170 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 229

Query: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           KQINITNVTCGPGHG+SIGSLGRYTNEEPVEGVIVNN
Sbjct: 230 KQINITNVTCGPGHGISIGSLGRYTNEEPVEGVIVNN 266

[Close]

BLAST of CmoCh13G003260 vs. ExPASy TrEMBL
Match: A0A6J1EWD3 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438523 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 7.9e-123
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60
           ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI
Sbjct: 50  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 109

Query: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120
           TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS
Sbjct: 110 TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 169

Query: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180
           KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS
Sbjct: 170 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 229

Query: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           KQINITNVTCGPGHG+SIGSLGRYTNEEPVEGVIV N
Sbjct: 230 KQINITNVTCGPGHGISIGSLGRYTNEEPVEGVIVKN 266

[Close]

BLAST of CmoCh13G003260 vs. NCBI nr
Match: XP_022927431.1 (exopolygalacturonase-like, partial [Cucurbita moschata])

HSP 1 Score: 452.2 bits (1162), Expect = 2.5e-123
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60
           ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI
Sbjct: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60

Query: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120
           TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS
Sbjct: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120

Query: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180
           KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS
Sbjct: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180

Query: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN
Sbjct: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 217

[Close]

BLAST of CmoCh13G003260 vs. NCBI nr
Match: XP_022927477.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 451.8 bits (1161), Expect = 3.3e-123
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60
           ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI
Sbjct: 50  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 109

Query: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120
           TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS
Sbjct: 110 TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 169

Query: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180
           KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS
Sbjct: 170 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 229

Query: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           KQINITNVTCGPGHG+SIGSLGRYTNEEPVEGVIVNN
Sbjct: 230 KQINITNVTCGPGHGISIGSLGRYTNEEPVEGVIVNN 266

[Close]

BLAST of CmoCh13G003260 vs. NCBI nr
Match: XP_022933298.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 451.8 bits (1161), Expect = 3.3e-123
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60
           ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI
Sbjct: 50  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 109

Query: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120
           TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS
Sbjct: 110 TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 169

Query: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180
           KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS
Sbjct: 170 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 229

Query: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           KQINITNVTCGPGHG+SIGSLGRYTNEEPVEGVIVNN
Sbjct: 230 KQINITNVTCGPGHGISIGSLGRYTNEEPVEGVIVNN 266

[Close]

BLAST of CmoCh13G003260 vs. NCBI nr
Match: XP_022932205.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 450.3 bits (1157), Expect = 9.5e-123
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60
           ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI
Sbjct: 50  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 109

Query: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120
           TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLP SLRFNFITNSIVKRITSLDS
Sbjct: 110 TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPFSLRFNFITNSIVKRITSLDS 169

Query: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180
           KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS
Sbjct: 170 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 229

Query: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           KQINITNVTCGPGHG+SIGSLGRYTNEEPVEGVIVNN
Sbjct: 230 KQINITNVTCGPGHGISIGSLGRYTNEEPVEGVIVNN 266

[Close]

BLAST of CmoCh13G003260 vs. NCBI nr
Match: XP_022932204.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 449.5 bits (1155), Expect = 1.6e-122
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 60
           ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI
Sbjct: 50  ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGNNWI 109

Query: 61  TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 120
           TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS
Sbjct: 110 TFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDS 169

Query: 121 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 180
           KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS
Sbjct: 170 KNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGS 229

Query: 181 KQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           KQINITNVTCGPGHG+SIGSLGRYTNEEPVEGVIV N
Sbjct: 230 KQINITNVTCGPGHGISIGSLGRYTNEEPVEGVIVKN 266

[Close]

BLAST of CmoCh13G003260 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 9.3e-68
Identity = 119/219 (54.34%), Postives = 159/219 (72.60%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NN 60
           AL  A+  AC S+  S +VIP G FK+ E   +GPC +PI+  L GT++A   ++QG   
Sbjct: 38  ALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAIQGKEK 97

Query: 61  WITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSL 120
           W+ F  ID   L+G G FDG+G AAW+ N+CHK   C +LPIS+RF+FI NS ++ I+S+
Sbjct: 98  WVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSI 157

Query: 121 DSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGD 180
           D+KNFHINVLG  N+T +NI I APE+SPNTDGIH+GRS+ + I  S I+TGDDCIS+GD
Sbjct: 158 DAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGD 217

Query: 181 GSKQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           G K +++  VTCGPGHG+S+GSLGRY +E+ V G+ V N
Sbjct: 218 GMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVIN 256

[Close]

BLAST of CmoCh13G003260 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 253.8 bits (647), Expect = 1.2e-67
Identity = 116/219 (52.97%), Postives = 158/219 (72.15%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NN 60
           AL  A+  AC +  +S +VI  G FK+ E    GPC +P++  L GTL+A  K++QG   
Sbjct: 39  ALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQGKER 98

Query: 61  WITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSL 120
           W+ F RI+   L+G G+FDG+G AAW+ N+CHK   C +LPIS+RF+F+ N+ ++ I+S+
Sbjct: 99  WVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSI 158

Query: 121 DSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGD 180
           D+KNFHINVLG  N+TF N+ + AP  SPNTDGIH+GRS  + I  SKIATGDDCIS+GD
Sbjct: 159 DAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGD 218

Query: 181 GSKQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           G K +++ NV CGPGHG+S+GSLGRY +E+ V G+ V N
Sbjct: 219 GMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVN 257

[Close]

BLAST of CmoCh13G003260 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 248.4 bits (633), Expect = 5.1e-66
Identity = 113/218 (51.83%), Postives = 156/218 (71.56%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQG-NNW 60
           AL  A+ +AC     S ++IP G +K+ E +  GPC +PI   L GT++A  +  G   W
Sbjct: 39  ALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGNANGKEKW 98

Query: 61  ITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLD 120
           + F  I+   L+G GVFDG+G AAW+ N+CHK  NC +LPIS+RF+F+T++ ++ ITSLD
Sbjct: 99  VAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLD 158

Query: 121 SKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDG 180
           +K+FHINV+G  N+TF ++ I AP  SPNTDGIH+GRS+ I I  S I+TGDDC+S+GDG
Sbjct: 159 AKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDG 218

Query: 181 SKQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
            K + +  VTCGPGHG+SIGSLGRY++EE V G+ + N
Sbjct: 219 MKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIIN 256

[Close]

BLAST of CmoCh13G003260 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-65
Identity = 113/219 (51.60%), Postives = 155/219 (70.78%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAP-KSLQG-NN 60
           AL  A+  AC S     +VIP G FK+ E +  GPC SP++  L GT+ A   S+ G   
Sbjct: 39  ALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGNSIHGKEK 98

Query: 61  WITFERIDRLTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSL 120
           W+ F+R+D   L+G G FDG+G AAW+ N+CHK   C +LPIS+RF+F+TN+ ++ I+S+
Sbjct: 99  WVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSI 158

Query: 121 DSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGD 180
           D+KNFHINV+G  N+TF N+ I AP  SPNTDGIH+GRS  ++I  S+I+TGDDC+S+GD
Sbjct: 159 DAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGD 218

Query: 181 GSKQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIVNN 218
           G   + + NV CGPGHG+S+GSLGRY +E+ V G+ V N
Sbjct: 219 GMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVIN 257

[Close]

BLAST of CmoCh13G003260 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 236.1 bits (601), Expect = 2.6e-62
Identity = 113/220 (51.36%), Postives = 148/220 (67.27%), Query Frame = 0


Query: 1   ALANAWKDACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGN--- 60
           A A AWK+AC +   S I +P G + V+   FKGPC  P+  +L G  +AP +++     
Sbjct: 88  AFAAAWKEACAA--GSTITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPH 147

Query: 61  -NWITFERIDRLTLSG-EGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRI 120
             WI FE I   TL+G + +FDGQG  AWK NDC K   C  LPI++RF  +TNS +  I
Sbjct: 148 AGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSI 207

Query: 121 TSLDSKNFHINVLGCNNLTFHNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCIS 180
           TS +SK FH+N+L C N+T  +I I AP  S NTDGIHIGRSN + +  +KI TGDDC+S
Sbjct: 208 TSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVS 267

Query: 181 LGDGSKQINITNVTCGPGHGVSIGSLGRYTNEEPVEGVIV 216
           +GDG++ + + NV CGPGHG+SIGSLGRY NE+PV+GV V
Sbjct: 268 IGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTV 305

The following BLAST results are available for this feature:

BLAST of CmoCh13G003260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24548	1.7e-69	57.92	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
P35337	3.0e-63	52.05	Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1	[more]
Q6H9K0	4.0e-63	51.60	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
Q39766	4.0e-63	48.85	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	5.2e-63	48.85	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]

BLAST of CmoCh13G003260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHN0	1.2e-123	100.00	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434259 PE=3 SV=...	[more]
A0A6J1EHA1	1.6e-123	99.54	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434295 PE=3 SV=...	[more]
A0A6J1F4C6	1.6e-123	99.54	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111440472 PE=3 SV=...	[more]
A0A6J1F1K6	4.6e-123	99.08	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438524 PE=3 SV=...	[more]
A0A6J1EWD3	7.9e-123	99.08	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438523 PE=3 SV=...	[more]

BLAST of CmoCh13G003260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927431.1	2.5e-123	100.00	exopolygalacturonase-like, partial [Cucurbita moschata]	[more]
XP_022927477.1	3.3e-123	99.54	exopolygalacturonase-like [Cucurbita moschata]	[more]
XP_022933298.1	3.3e-123	99.54	exopolygalacturonase-like [Cucurbita moschata]	[more]
XP_022932205.1	9.5e-123	99.08	exopolygalacturonase-like [Cucurbita moschata]	[more]
XP_022932204.1	1.6e-122	99.08	exopolygalacturonase-like [Cucurbita moschata]	[more]

BLAST of CmoCh13G003260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	9.3e-68	54.34	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	1.2e-67	52.97	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	5.1e-66	51.83	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	1.1e-65	51.60	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	2.6e-62	51.36	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..217 e-value: 1.5E-60 score: 206.8
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 10..217 e-value: 6.6E-61 score: 206.1
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 187..200
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 2..217
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 2..217
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 1..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G003260.1	CmoCh13G003260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity