CmoCh13G002820 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G002820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Vacuolar protein sorting-associated protein 41 homolog
Location	Cmo_Chr13: 2327645 .. 2330780 (+)
RNA-Seq Expression	CmoCh13G002820
Synteny	CmoCh13G002820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAGCTTGACCTGGAGTATGATAGTGAACAGAGATGTACGACTCATTTTGTTCATAGCCAAAATTCGTGGTTTCTATGTAGTTAGAGCTTTCTTGTTCCTATTTTAATAATTTGGTTCCTATTTACCCTCCAATAATTTTGTAGGTGGAGCTTTATGCTGACTATGATATAAAGATGCTACTTCCATTTCTTCGTAGTAGTCAACATTATACACTTGAGAAGGTCAGAATTACATGTTGGTGTTTATAATGGTTATTCTTTATGTGTTTATAACTTTGTGAACATAATCTCAGGCATACGATATTTGCGTTAAAAAAAATCTTTTGAGGGAGCAAGTCTTCATTCTTGGAAGAATGGGAAACGCAAAACAAGCCCTTGCTGTCATCATTGATAAATTAGGAGATATAGAAGAGGTACTTTCATTATTTTCTGACTACAGGCCGTCTTTGCTTTCTGATAGACACTTCACATAGAAACTTTGTTTTAACCATGAACAGGCAGTAGAGTTCGTTAGCATGCAGCATGATGATGAACTTTGGGAAGAATTAATAAAGCTATGTCTTCACAAGGCGGAAATGGTATTGACGAATGCTCTTTGCTTGATGACTAATTTTCCGTGCACATTTATTTTAAATGATTTGTCCTCCATTATTGACAGGTTGGCATGTTGTTGGAGCACACAGTTGGCAATCTAGATCCTCTTTATATTGTGAACATGGTTCCCAATGGAATAGAGATACCTCGGTTAGTGTCAATTTCTGTTATCATTCGTTTTCAACATTTATCGTTCACTTGTATAATTTTGTTTACTTAATTTTTAATGTTGTCCTACCTAGAATTACATTAGTGGTATAGAATTTGTCAAGGTACTTATAGAATTTGACGGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTATGGGCTTCCCCTCAAGGTTTTAAAACACGTATGTTAGGGAGAAGTTTCCACACCGTTATTAAGGATGTTTTATTTCCCTCTTAAATGAGATCTCACAATCCACCAATCCATTCCCTTTGGGGGCCTAGCGTTCTCACTGGCATACCCTCCGATGCCTGGTTCTATACCATTTGTAACGGCCAAAACCCACCATTTTGTCCTTTTTGGGATTTTCCTTTCGGGCTTTCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCATTCTCCTCCCCAACCGATGTGAGATCTCCCGTCGGGAGACTTATTTATTTATTTTTAGGTTCTGGTCTATCACAGTGCTTCTTAGACCTATTTGATAGTATTCTGTAGTTGCTCCACCTTTCTTTATATTCTTAATTTTGGGAACTCTTTGTATTTCCTGATTTGGTCTTCGTCACATCTTTTTATACCCGAAATCCTCAACTATCTTAAACCACTCCAAATATTTCAGTCCTTGGAATCATTGCTCATTGAGCTACCCTCCCTTCCCCCCAAAATGTATATACACATACATATATATTTATTGCTTTTCTTTAATATTACTTCTTTTTTCCTAATAATAAAGAATTTCTTATGGATTCTTATTTGAGATGAAAGGTTGTGCTTAAAGGATCACACTCATAGATATTGGGTTTTTATCTGTTATTACTCAAAAAGTAATAAAAACTACCACTTAGGATTCAGTTCTCAACACTTGTATTAAATCAGCTAAAGATCTCATATCTTGTTTATCGATAGTGTCTATTGGTTTTGTATATCTTTATTGATAAAGTCCAGTGTATCCAGCTAATATTTTGAATTGTGTCTATGCTCTCCTTGTATATGATCTCTGTTTTAAGTTGGCAGAGCTGTTTATTAGTTGATTGTTGAGGCACTATAACTGGTTTATTACCCTTCTTGGCCGATGTATTTTCGGAGATTTTCTCACAAAACTTTCAAGTGTTGGACGTGTAGCAACGAGTAACGAAAATAAGCATACAACTATAAGTCTTGTTATCAGATTGTAGGTTGTGCCTGAATTAAACAAATTAAACATATGTAAAATTAATTATAATTGTTCATTTGGATGTACATAGTGTCTGAAATCTTTCCTTTATTCTATTGCAGGCTTCGGGATCGGCTAGTTAAAATTATTACCGATTACCGAACGGAAACCAGCCTCAGACATGGATGCAATGATATTTTGAAGGTATTTTCATGCTAGACAAATTTAGTTGCTTCACTAGAACTGAACCTTGTGCTGGCAAATAGTAATGTGTGATTTTCGACAGGCCGACACTGTGAATCTATTGGTTAAGTACTACAAAGAGGCTAGACATGGAGTTTACTTGAGCAATGAAGACGATGAAGTACGTGGGAAAAGGAATGAAAATAAGGTTTCTCAGTCGATTCAGAAATCTTTGAGTGTTAGAATGATGGAGGTTAAGTCGAAAACTCGGGGAGGCGCTCGTTGCTGCATATGTTTTAATCCCTTTTCAATACAAAACATATCTGTTATTGTGTTCTTTTGCTGTCATGCGTACCATGAGACTTGTCTCATAGAATCTACTTCCAATCTTGATGCTAAAAAAGGGACGGGAGAGACTCGGCATGATTCAGTATCTAACTTCGAATACGATAACGGAGAAATAGAGGACGATGATGAGGACGAGGCTGATATGGGCGGTCCTAGAATGCGTTGTATCTTATGTACTACTGCTTCTTCCAAGAGTTGATACCCTTTGTTTACTTTTCTTCCTCTTTGTTGGGCTTCTTTGAATGCGTTTATTCGCATACAGGCATGTACAGGCTATCATCTCTTGCTTGCTTGCATTGCTCTTCATATTTTTCTTTATCAAAGTTTGTATAATTAAGGTTGGAAGATTTTGTTTGATGGCTGGAGCGATTTTTATTCGATACAAAGCTCGAAGTTATGTTCGGGTTTGTATGAATATACTTAGTTGAGTTGGGTTATGTGATTTATGGGCTGAGGGTGATTGACATTTGTATATTTTCTTTTTCAAATTCGATTCTCGTGAGATATGTAACTTCTTGTAACGGCAATAACATTTGAATCATATTTGTTATGACCTCAAAATTTTTTATTTTTTTTAATTTTTTGAACAACTTCGATTGAGATGGAAGGATATT

mRNA sequence

ATGGTTAAGCTTGACCTGGAGTATGATAGTGAACAGAGATGTACGACTCATTTTGTGGAGCTTTATGCTGACTATGATATAAAGATGCTACTTCCATTTCTTCGTAGTAGTCAACATTATACACTTGAGAAGGCATACGATATTTGCGTTAAAAAAAATCTTTTGAGGGAGCAAGTCTTCATTCTTGGAAGAATGGGAAACGCAAAACAAGCCCTTGCTGTCATCATTGATAAATTAGGAGATATAGAAGAGGCAGTAGAGTTCGTTAGCATGCAGCATGATGATGAACTTTGGGAAGAATTAATAAAGCTATGTCTTCACAAGGCGGAAATGGTTGGCATGTTGTTGGAGCACACAGTTGGCAATCTAGATCCTCTTTATATTGTGAACATGGTTCCCAATGGAATAGAGATACCTCGGCTTCGGGATCGGCTAGTTAAAATTATTACCGATTACCGAACGGAAACCAGCCTCAGACATGGATGCAATGATATTTTGAAGGCCGACACTGTGAATCTATTGGTTAAGTACTACAAAGAGGCTAGACATGGAGTTTACTTGAGCAATGAAGACGATGAAGTACGTGGGAAAAGGAATGAAAATAAGGTTTCTCAGTCGATTCAGAAATCTTTGAGTGTTAGAATGATGGAGGTTAAGTCGAAAACTCGGGGAGGCGCTCGTTGCTGCATATGTTTTAATCCCTTTTCAATACAAAACATATCTGTTATTGTGTTCTTTTGCTGTCATGCGTACCATGAGACTTGTCTCATAGAATCTACTTCCAATCTTGATGCTAAAAAAGGGACGGGAGAGACTCGGCATGATTCAGTATCTAACTTCGAATACGATAACGGAGAAATAGAGGACGATGATGAGGACGAGGCTGATATGGGCGGTCCTAGAATGCGTTGTATCTTATGTACTACTGCTTCTTCCAAGAGTTGATACCCTTTGTTTACTTTTCTTCCTCTTTGTTGGGCTTCTTTGAATGCGTTTATTCGCATACAGGCATGTACAGGCTATCATCTCTTGCTTGCTTGCATTGCTCTTCATATTTTTCTTTATCAAAGTTTGTATAATTAAGGTTGGAAGATTTTGTTTGATGGCTGGAGCGATTTTTATTCGATACAAAGCTCGAAGTTATGTTCGGGTTTGTATGAATATACTTAGTTGAGTTGGGTTATGTGATTTATGGGCTGAGGGTGATTGACATTTGTATATTTTCTTTTTCAAATTCGATTCTCGTGAGATATGTAACTTCTTGTAACGGCAATAACATTTGAATCATATTTGTTATGACCTCAAAATTTTTTATTTTTTTTAATTTTTTGAACAACTTCGATTGAGATGGAAGGATATT

Coding sequence (CDS)

ATGGTTAAGCTTGACCTGGAGTATGATAGTGAACAGAGATGTACGACTCATTTTGTGGAGCTTTATGCTGACTATGATATAAAGATGCTACTTCCATTTCTTCGTAGTAGTCAACATTATACACTTGAGAAGGCATACGATATTTGCGTTAAAAAAAATCTTTTGAGGGAGCAAGTCTTCATTCTTGGAAGAATGGGAAACGCAAAACAAGCCCTTGCTGTCATCATTGATAAATTAGGAGATATAGAAGAGGCAGTAGAGTTCGTTAGCATGCAGCATGATGATGAACTTTGGGAAGAATTAATAAAGCTATGTCTTCACAAGGCGGAAATGGTTGGCATGTTGTTGGAGCACACAGTTGGCAATCTAGATCCTCTTTATATTGTGAACATGGTTCCCAATGGAATAGAGATACCTCGGCTTCGGGATCGGCTAGTTAAAATTATTACCGATTACCGAACGGAAACCAGCCTCAGACATGGATGCAATGATATTTTGAAGGCCGACACTGTGAATCTATTGGTTAAGTACTACAAAGAGGCTAGACATGGAGTTTACTTGAGCAATGAAGACGATGAAGTACGTGGGAAAAGGAATGAAAATAAGGTTTCTCAGTCGATTCAGAAATCTTTGAGTGTTAGAATGATGGAGGTTAAGTCGAAAACTCGGGGAGGCGCTCGTTGCTGCATATGTTTTAATCCCTTTTCAATACAAAACATATCTGTTATTGTGTTCTTTTGCTGTCATGCGTACCATGAGACTTGTCTCATAGAATCTACTTCCAATCTTGATGCTAAAAAAGGGACGGGAGAGACTCGGCATGATTCAGTATCTAACTTCGAATACGATAACGGAGAAATAGAGGACGATGATGAGGACGAGGCTGATATGGGCGGTCCTAGAATGCGTTGTATCTTATGTACTACTGCTTCTTCCAAGAGTTGA

Protein sequence

MVKLDLEYDSEQRCTTHFVELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDKLGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEIPRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKRNENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIESTSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS

Homology

[Close]

BLAST of CmoCh13G002820 vs. ExPASy Swiss-Prot
Match: P93231 (Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum OX=4081 GN=VPS41 PE=2 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 9.0e-117
Identity = 214/301 (71.10%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYADYD KMLL FLRSSQHYTLEKAY+ICVKK+LL+EQVFILGRMGNAKQALAVII++
Sbjct: 659 VELYADYDPKMLLTFLRSSQHYTLEKAYEICVKKDLLKEQVFILGRMGNAKQALAVIINR 718

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEA+EFVSMQ DDELWEELI+   HK EMVG+LLEHTVGNLDPLYIVNM+PN +EI
Sbjct: 719 LGDIEEAIEFVSMQQDDELWEELIQQSFHKPEMVGVLLEHTVGNLDPLYIVNMLPNDLEI 778

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKI+TDYRTETSLRHGCNDILKAD VNLLVKYYKEA+ GV LS+E D+V  +R
Sbjct: 779 PRLRDRLVKIVTDYRTETSLRHGCNDILKADCVNLLVKYYKEAKRGVCLSDEVDDVSSRR 838

Query: 199 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 258
            E  VS   ++++S++ +EVKSKTRGG RCCICF+PFSI N+S+I FFCCHAYH TCL+E
Sbjct: 839 GEKSVSHLGERTMSLKSVEVKSKTRGGGRCCICFDPFSILNVSIIAFFCCHAYHTTCLME 898

Query: 259 STSNLDAKKGTGETRHDSVSNFEYDNG---EIEDDDEDE-----ADMGGPRMRCILCTTA 312
           S+ ++  KK  G     + S  EY NG   + ED+DE+E     A  G   MRCILCTTA
Sbjct: 899 SSISVGGKKEAGVAAQRTTSYDEYPNGVNDDYEDEDEEEEEEEDATSGALPMRCILCTTA 958

[Close]

BLAST of CmoCh13G002820 vs. ExPASy Swiss-Prot
Match: P93043 (Vacuolar protein sorting-associated protein 41 homolog OS=Arabidopsis thaliana OX=3702 GN=VPS41 PE=1 SV=3)

HSP 1 Score: 415.6 bits (1067), Expect = 4.9e-115
Identity = 212/309 (68.61%), Postives = 251/309 (81.23%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYA+YD KMLLPFLRSSQHY LEKAY++CVKK+ LREQVF+LGRMGNAKQALAVII+K
Sbjct: 674 VELYAEYDTKMLLPFLRSSQHYKLEKAYELCVKKDFLREQVFVLGRMGNAKQALAVIINK 733

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEAVEFVSMQHDD+LWEELIK CL+K EMVG+LLEHTVGNLDPLYIVNMVPNG+EI
Sbjct: 734 LGDIEEAVEFVSMQHDDDLWEELIKQCLNKPEMVGLLLEHTVGNLDPLYIVNMVPNGLEI 793

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKI+TDYRTETSLRHGCNDILK D VNLLVK + EAR GV LS+EDD+ R KR
Sbjct: 794 PRLRDRLVKIVTDYRTETSLRHGCNDILKTDIVNLLVKCFNEARRGVCLSHEDDDSRAKR 853

Query: 199 NENKVS-----QSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHE 258
            +N  S       + KSLS++M EVKSKTRG  RCC+CF+P SI+  +V+VFFCCHAYHE
Sbjct: 854 EDNNRSSFSQRMVVDKSLSIKMTEVKSKTRGDTRCCMCFDPVSIRGDTVVVFFCCHAYHE 913

Query: 259 TCLIEST-SNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGG-------PRMRCI 315
           TCL+++  SN + K   G + ++    + YDNG  E+++++E D  G        R+RCI
Sbjct: 914 TCLMDAAFSNNNHKTTKGSSGYE----YSYDNGVDEEEEDEEEDEDGDGDRPGRSRLRCI 973

[Close]

BLAST of CmoCh13G002820 vs. ExPASy Swiss-Prot
Match: Q5KU39 (Vacuolar protein sorting-associated protein 41 homolog OS=Mus musculus OX=10090 GN=Vps41 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.8e-39
Identity = 91/264 (34.47%), Postives = 140/264 (53.03%), Query Frame = 0


Query: 7   EYDSEQRCTTHFVELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMG 66
           ++   QR     + LYA+YD   LLPFLR S H  LEKA +IC ++N + E V++L RMG
Sbjct: 604 DHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMG 663

Query: 67  NAKQALAVIIDKLGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPL 126
           N++ AL +I+++L D+++A+EF   Q D ELWE+LI   + K   +  LL +   ++DP+
Sbjct: 664 NSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPI 723

Query: 127 YIVNMVPNGIEIPRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVY 186
            +++ +  G+EIP LRD LVKI+ DY  +  LR GC  IL AD+++LL K ++    GV 
Sbjct: 724 LLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVL 783

Query: 187 LSNEDDEVRGKRNENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPF----SIQNISV 246
           +  E+                                    C  C +P     + +  SV
Sbjct: 784 VDEEN-----------------------------------ICESCLSPILPTDAAKPFSV 832

Query: 247 IVFFCCHAYHETCLIESTSNLDAK 267
           +VF C H +H+ CL   + N  A+
Sbjct: 844 VVFHCRHMFHKECLPMPSMNAPAQ 832

[Close]

BLAST of CmoCh13G002820 vs. ExPASy Swiss-Prot
Match: P49754 (Vacuolar protein sorting-associated protein 41 homolog OS=Homo sapiens OX=9606 GN=VPS41 PE=1 SV=3)

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-38
Identity = 91/264 (34.47%), Postives = 140/264 (53.03%), Query Frame = 0


Query: 7   EYDSEQRCTTHFVELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMG 66
           ++   QR     + LYA+YD   LLPFLR S H  LEKA +IC ++N + E V++L RMG
Sbjct: 605 DHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMG 664

Query: 67  NAKQALAVIIDKLGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPL 126
           N++ AL +I+++L D+++A+EF   Q D ELWE+LI   + K   +  LL +   ++DP+
Sbjct: 665 NSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPI 724

Query: 127 YIVNMVPNGIEIPRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVY 186
            +++ +  G+EIP LRD LVKI+ DY  +  LR GC  IL AD+++LL K ++    GV 
Sbjct: 725 LLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVL 784

Query: 187 LSNEDDEVRGKRNENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPF----SIQNISV 246
           +  E+                                    C  C +P     + +  SV
Sbjct: 785 VDEEN-----------------------------------ICESCLSPILPSDAAKPFSV 833

Query: 247 IVFFCCHAYHETCLIESTSNLDAK 267
           +VF C H +H+ CL   + N  A+
Sbjct: 845 VVFHCRHMFHKECLPMPSMNSAAQ 833

[Close]

BLAST of CmoCh13G002820 vs. ExPASy Swiss-Prot
Match: Q9P7N3 (Vacuolar protein sorting-associated protein 41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vps41 PE=3 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 9.5e-26
Identity = 57/174 (32.76%), Postives = 109/174 (62.64%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           ++++A++D K    FL ++Q Y+L+ A  IC + N L E V+ILGRMGN K+AL +II++
Sbjct: 621 LDVFAEFDRKRFFDFLVNTQCYSLDHAAQICKQYNYLDELVYILGRMGNNKEALMLIINE 680

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           L DI  A+ +V  Q D ELW++LI   L K E +  LLE+   + +   +++ +P G ++
Sbjct: 681 LLDIGRAIRYVKEQADRELWDDLISYSLDKPEFICTLLENIGTDENARNLLSKIPPGTKL 740

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDD 193
           P ++  + K++ D++++  L   C  + K +++++ +KY ++ + G+    +D+
Sbjct: 741 PHMKKSISKLLADHQSQVQLYQSCYKLFKNESISMAIKYREQEQSGLEFLVKDN 794

[Close]

BLAST of CmoCh13G002820 vs. ExPASy TrEMBL
Match: A0A6J1HJR5 (Vacuolar protein sorting-associated protein 41 homolog OS=Cucurbita moschata OX=3662 GN=LOC111464717 PE=3 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 4.9e-166
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK
Sbjct: 677 VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 736

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI
Sbjct: 737 LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 796

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR
Sbjct: 797 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 856

Query: 199 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 258
           NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE
Sbjct: 857 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 916

Query: 259 STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 315
           STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS
Sbjct: 917 STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 972

[Close]

BLAST of CmoCh13G002820 vs. ExPASy TrEMBL
Match: A0A6J1I2G3 (Vacuolar protein sorting-associated protein 41 homolog OS=Cucurbita maxima OX=3661 GN=LOC111469300 PE=3 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 2.7e-164
Identity = 292/296 (98.65%), Postives = 295/296 (99.66%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYADYDIKMLLPFLRSSQHYTLEKAY+IC+KKNLLREQVFILGRMGNAKQALAVIIDK
Sbjct: 667 VELYADYDIKMLLPFLRSSQHYTLEKAYEICIKKNLLREQVFILGRMGNAKQALAVIIDK 726

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI
Sbjct: 727 LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 786

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR
Sbjct: 787 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 846

Query: 199 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 258
           NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE
Sbjct: 847 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 906

Query: 259 STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 315
           STSNLDAKKGTGETRHDSVS+F YDNGEIEDDDEDEADMGGPRMRCILCTTASSKS
Sbjct: 907 STSNLDAKKGTGETRHDSVSDFNYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 962

[Close]

BLAST of CmoCh13G002820 vs. ExPASy TrEMBL
Match: A0A5D3BNM7 (Vacuolar protein sorting-associated protein 41 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00280 PE=3 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.5e-156
Identity = 276/298 (92.62%), Postives = 289/298 (96.98%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYADYD KMLLPFLRSSQHYTLEKAYDIC+KKNLLREQVFILGRMGNAKQALAVIIDK
Sbjct: 494 VELYADYDTKMLLPFLRSSQHYTLEKAYDICIKKNLLREQVFILGRMGNAKQALAVIIDK 553

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEAVEFVSMQHDD+LWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNG+EI
Sbjct: 554 LGDIEEAVEFVSMQHDDDLWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGLEI 613

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHG+YLSNE+DE RGKR
Sbjct: 614 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGIYLSNEEDEARGKR 673

Query: 199 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 258
           NENKVSQSIQKSL+VRMMEVKSKTRGG RCCICFNPFSIQNISVIVFFCCHAYHETCLIE
Sbjct: 674 NENKVSQSIQKSLNVRMMEVKSKTRGGTRCCICFNPFSIQNISVIVFFCCHAYHETCLIE 733

Query: 259 STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDD--EDEADMGGPRMRCILCTTASSKS 315
           STSNLDAKKGTGET HD  S+F+YDNGE+EDD+  ED+ DMGGPRMRCILCTTA+SK+
Sbjct: 734 STSNLDAKKGTGETGHDLASDFDYDNGEMEDDEDGEDDTDMGGPRMRCILCTTAASKT 791

[Close]

BLAST of CmoCh13G002820 vs. ExPASy TrEMBL
Match: A0A5A7U9Q0 (Vacuolar protein sorting-associated protein 41-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00440 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.5e-156
Identity = 276/298 (92.62%), Postives = 289/298 (96.98%), Query Frame = 0


Query: 19   VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
            VELYADYD KMLLPFLRSSQHYTLEKAYDIC+KKNLLREQVFILGRMGNAKQALAVIIDK
Sbjct: 833  VELYADYDTKMLLPFLRSSQHYTLEKAYDICIKKNLLREQVFILGRMGNAKQALAVIIDK 892

Query: 79   LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
            LGDIEEAVEFVSMQHDD+LWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNG+EI
Sbjct: 893  LGDIEEAVEFVSMQHDDDLWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGLEI 952

Query: 139  PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
            PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHG+YLSNE+DE RGKR
Sbjct: 953  PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGIYLSNEEDEARGKR 1012

Query: 199  NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 258
            NENKVSQSIQKSL+VRMMEVKSKTRGG RCCICFNPFSIQNISVIVFFCCHAYHETCLIE
Sbjct: 1013 NENKVSQSIQKSLNVRMMEVKSKTRGGTRCCICFNPFSIQNISVIVFFCCHAYHETCLIE 1072

Query: 259  STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDD--EDEADMGGPRMRCILCTTASSKS 315
            STSNLDAKKGTGET HD  S+F+YDNGE+EDD+  ED+ DMGGPRMRCILCTTA+SK+
Sbjct: 1073 STSNLDAKKGTGETGHDLASDFDYDNGEMEDDEDGEDDTDMGGPRMRCILCTTAASKT 1130

[Close]

BLAST of CmoCh13G002820 vs. ExPASy TrEMBL
Match: A0A1S3CGC3 (Vacuolar protein sorting-associated protein 41 homolog OS=Cucumis melo OX=3656 GN=LOC103500583 PE=3 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.5e-156
Identity = 276/298 (92.62%), Postives = 289/298 (96.98%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYADYD KMLLPFLRSSQHYTLEKAYDIC+KKNLLREQVFILGRMGNAKQALAVIIDK
Sbjct: 663 VELYADYDTKMLLPFLRSSQHYTLEKAYDICIKKNLLREQVFILGRMGNAKQALAVIIDK 722

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEAVEFVSMQHDD+LWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNG+EI
Sbjct: 723 LGDIEEAVEFVSMQHDDDLWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGLEI 782

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHG+YLSNE+DE RGKR
Sbjct: 783 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGIYLSNEEDEARGKR 842

Query: 199 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 258
           NENKVSQSIQKSL+VRMMEVKSKTRGG RCCICFNPFSIQNISVIVFFCCHAYHETCLIE
Sbjct: 843 NENKVSQSIQKSLNVRMMEVKSKTRGGTRCCICFNPFSIQNISVIVFFCCHAYHETCLIE 902

Query: 259 STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDD--EDEADMGGPRMRCILCTTASSKS 315
           STSNLDAKKGTGET HD  S+F+YDNGE+EDD+  ED+ DMGGPRMRCILCTTA+SK+
Sbjct: 903 STSNLDAKKGTGETGHDLASDFDYDNGEMEDDEDGEDDTDMGGPRMRCILCTTAASKT 960

[Close]

BLAST of CmoCh13G002820 vs. NCBI nr
Match: XP_022964726.1 (vacuolar protein sorting-associated protein 41 homolog [Cucurbita moschata])

HSP 1 Score: 593.6 bits (1529), Expect = 1.0e-165
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK
Sbjct: 677 VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 736

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI
Sbjct: 737 LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 796

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR
Sbjct: 797 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 856

Query: 199 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 258
           NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE
Sbjct: 857 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 916

Query: 259 STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 315
           STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS
Sbjct: 917 STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 972

[Close]

BLAST of CmoCh13G002820 vs. NCBI nr
Match: KAG7019302.1 (Vacuolar protein sorting-associated protein 41-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 592.0 bits (1525), Expect = 2.9e-165
Identity = 295/296 (99.66%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK
Sbjct: 663 VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 722

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI
Sbjct: 723 LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 782

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR
Sbjct: 783 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 842

Query: 199 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 258
           NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE
Sbjct: 843 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 902

Query: 259 STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 315
           STSNLDAKKGTGETRHDSVSNFEYDNGEIE+DDEDEADMGGPRMRCILCTTASSKS
Sbjct: 903 STSNLDAKKGTGETRHDSVSNFEYDNGEIEEDDEDEADMGGPRMRCILCTTASSKS 958

[Close]

BLAST of CmoCh13G002820 vs. NCBI nr
Match: KAG6583600.1 (Vacuolar protein sorting-associated protein 41-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 592.0 bits (1525), Expect = 2.9e-165
Identity = 295/296 (99.66%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK
Sbjct: 663 VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 722

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI
Sbjct: 723 LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 782

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR
Sbjct: 783 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 842

Query: 199 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 258
           NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE
Sbjct: 843 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 902

Query: 259 STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 315
           STSNLDAKKGTGETRHDSVSNFEYDNGEIE+DDEDEADMGGPRMRCILCTTASSKS
Sbjct: 903 STSNLDAKKGTGETRHDSVSNFEYDNGEIEEDDEDEADMGGPRMRCILCTTASSKS 958

[Close]

BLAST of CmoCh13G002820 vs. NCBI nr
Match: XP_022970290.1 (vacuolar protein sorting-associated protein 41 homolog [Cucurbita maxima])

HSP 1 Score: 587.8 bits (1514), Expect = 5.5e-164
Identity = 292/296 (98.65%), Postives = 295/296 (99.66%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYADYDIKMLLPFLRSSQHYTLEKAY+IC+KKNLLREQVFILGRMGNAKQALAVIIDK
Sbjct: 667 VELYADYDIKMLLPFLRSSQHYTLEKAYEICIKKNLLREQVFILGRMGNAKQALAVIIDK 726

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI
Sbjct: 727 LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 786

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR
Sbjct: 787 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 846

Query: 199 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 258
           NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE
Sbjct: 847 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 906

Query: 259 STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 315
           STSNLDAKKGTGETRHDSVS+F YDNGEIEDDDEDEADMGGPRMRCILCTTASSKS
Sbjct: 907 STSNLDAKKGTGETRHDSVSDFNYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 962

[Close]

BLAST of CmoCh13G002820 vs. NCBI nr
Match: XP_023519696.1 (vacuolar protein sorting-associated protein 41 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 587.4 bits (1513), Expect = 7.2e-164
Identity = 292/296 (98.65%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK
Sbjct: 660 VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 719

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI
Sbjct: 720 LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 779

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNE+DEVRGKR
Sbjct: 780 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEEDEVRGKR 839

Query: 199 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 258
           NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE
Sbjct: 840 NENKVSQSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHETCLIE 899

Query: 259 STSNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 315
           STSNLDAKKGTGET+HDSVS+F+YDNGEIEDDDEDEADMGGPRMRCILCTTASSKS
Sbjct: 900 STSNLDAKKGTGETQHDSVSDFDYDNGEIEDDDEDEADMGGPRMRCILCTTASSKS 955

[Close]

BLAST of CmoCh13G002820 vs. TAIR 10
Match: AT1G08190.1 (vacuolar protein sorting 41 )

HSP 1 Score: 415.6 bits (1067), Expect = 3.5e-116
Identity = 212/309 (68.61%), Postives = 251/309 (81.23%), Query Frame = 0


Query: 19  VELYADYDIKMLLPFLRSSQHYTLEKAYDICVKKNLLREQVFILGRMGNAKQALAVIIDK 78
           VELYA+YD KMLLPFLRSSQHY LEKAY++CVKK+ LREQVF+LGRMGNAKQALAVII+K
Sbjct: 674 VELYAEYDTKMLLPFLRSSQHYKLEKAYELCVKKDFLREQVFVLGRMGNAKQALAVIINK 733

Query: 79  LGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGIEI 138
           LGDIEEAVEFVSMQHDD+LWEELIK CL+K EMVG+LLEHTVGNLDPLYIVNMVPNG+EI
Sbjct: 734 LGDIEEAVEFVSMQHDDDLWEELIKQCLNKPEMVGLLLEHTVGNLDPLYIVNMVPNGLEI 793

Query: 139 PRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGVYLSNEDDEVRGKR 198
           PRLRDRLVKI+TDYRTETSLRHGCNDILK D VNLLVK + EAR GV LS+EDD+ R KR
Sbjct: 794 PRLRDRLVKIVTDYRTETSLRHGCNDILKTDIVNLLVKCFNEARRGVCLSHEDDDSRAKR 853

Query: 199 NENKVS-----QSIQKSLSVRMMEVKSKTRGGARCCICFNPFSIQNISVIVFFCCHAYHE 258
            +N  S       + KSLS++M EVKSKTRG  RCC+CF+P SI+  +V+VFFCCHAYHE
Sbjct: 854 EDNNRSSFSQRMVVDKSLSIKMTEVKSKTRGDTRCCMCFDPVSIRGDTVVVFFCCHAYHE 913

Query: 259 TCLIEST-SNLDAKKGTGETRHDSVSNFEYDNGEIEDDDEDEADMGG-------PRMRCI 315
           TCL+++  SN + K   G + ++    + YDNG  E+++++E D  G        R+RCI
Sbjct: 914 TCLMDAAFSNNNHKTTKGSSGYE----YSYDNGVDEEEEDEEEDEDGDGDRPGRSRLRCI 973

The following BLAST results are available for this feature:

BLAST of CmoCh13G002820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93231	9.0e-117	71.10	Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum O...	[more]
P93043	4.9e-115	68.61	Vacuolar protein sorting-associated protein 41 homolog OS=Arabidopsis thaliana O...	[more]
Q5KU39	9.8e-39	34.47	Vacuolar protein sorting-associated protein 41 homolog OS=Mus musculus OX=10090 ...	[more]
P49754	1.7e-38	34.47	Vacuolar protein sorting-associated protein 41 homolog OS=Homo sapiens OX=9606 G...	[more]
Q9P7N3	9.5e-26	32.76	Vacuolar protein sorting-associated protein 41 OS=Schizosaccharomyces pombe (str...	[more]

BLAST of CmoCh13G002820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJR5	4.9e-166	100.00	Vacuolar protein sorting-associated protein 41 homolog OS=Cucurbita moschata OX=...	[more]
A0A6J1I2G3	2.7e-164	98.65	Vacuolar protein sorting-associated protein 41 homolog OS=Cucurbita maxima OX=36...	[more]
A0A5D3BNM7	3.5e-156	92.62	Vacuolar protein sorting-associated protein 41 homolog OS=Cucumis melo var. maku...	[more]
A0A5A7U9Q0	3.5e-156	92.62	Vacuolar protein sorting-associated protein 41-like protein OS=Cucumis melo var....	[more]
A0A1S3CGC3	3.5e-156	92.62	Vacuolar protein sorting-associated protein 41 homolog OS=Cucumis melo OX=3656 G...	[more]

BLAST of CmoCh13G002820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964726.1	1.0e-165	100.00	vacuolar protein sorting-associated protein 41 homolog [Cucurbita moschata]	[more]
KAG7019302.1	2.9e-165	99.66	Vacuolar protein sorting-associated protein 41-like protein, partial [Cucurbita ...	[more]
KAG6583600.1	2.9e-165	99.66	Vacuolar protein sorting-associated protein 41-like protein, partial [Cucurbita ...	[more]
XP_022970290.1	5.5e-164	98.65	vacuolar protein sorting-associated protein 41 homolog [Cucurbita maxima]	[more]
XP_023519696.1	7.2e-164	98.65	vacuolar protein sorting-associated protein 41 homolog [Cucurbita pepo subsp. pe...	[more]

BLAST of CmoCh13G002820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08190.1	3.5e-116	68.61	vacuolar protein sorting 41	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	SMART	SM00299	CLH_2	coord: 2..114 e-value: 4.0E-6 score: 36.3
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	PFAM	PF00637	Clathrin	coord: 16..108 e-value: 3.1E-17 score: 62.8
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	PROSITE	PS50236	CHCR	coord: 1..114 score: 28.232273
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 4..179 e-value: 2.0E-13 score: 51.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 188..264 e-value: 2.7E-5 score: 25.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..299
None	No IPR available	PANTHER	PTHR12616:SF11	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOG	coord: 18..311
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 222..259
IPR045111	Vacuolar protein sorting-associated protein Vps41/Vps8	PANTHER	PTHR12616	VACUOLAR PROTEIN SORTING VPS41	coord: 18..311

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G002820.1	CmoCh13G002820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009267	cellular response to starvation
biological_process	GO:0034058	endosomal vesicle fusion
biological_process	GO:0016236	macroautophagy
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030897	HOPS complex
cellular_component	GO:0005770	late endosome
molecular_function	GO:0005515	protein binding