CmoCh13G002360 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G002360
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR72-like
Location	Cmo_Chr13: 1886484 .. 1886915 (+)
RNA-Seq Expression	CmoCh13G002360
Synteny	CmoCh13G002360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGTCTAGAAGCATGAAGAGAAAGAACGGTATCAAGGTCGTCGTTGAGAAGTTGCAAAAGAGCCTATCTCGAGGTCGAAAACCGAGTAGTAAGAATAGTTATGAGGATTTCGATGAAGTTGTGGACTCGACGTCGGTACCAGAGGACGTGAAAGAAGGGCATTTTGCAGTGGTGGCGGTGGACGGGGAGGAGCCGAAACGATTCGTTGTTCCGTTGAGTTGTTTGACACATCCTATGTTCTTGAGGCTGTTGGAGCAAGCAGCTGAGGAGTATGGGTTTGATCATGAAGGTGCATTGACAATCCCATGTCAGCCATGTGAGGTTGAGAATATTTTGGCTGAGCAATGGAAGTTAGAGTCTAAAAGAGATTCTAGAGATGCATTTACTTGGGGAACTTTGTGTAAAGCCATTATTCAAAGTTATTGA

mRNA sequence

ATGGCCAAGTCTAGAAGCATGAAGAGAAAGAACGGTATCAAGGTCGTCGTTGAGAAGTTGCAAAAGAGCCTATCTCGAGGTCGAAAACCGAGTAGTAAGAATAGTTATGAGGATTTCGATGAAGTTGTGGACTCGACGTCGGTACCAGAGGACGTGAAAGAAGGGCATTTTGCAGTGGTGGCGGTGGACGGGGAGGAGCCGAAACGATTCGTTGTTCCGTTGAGTTGTTTGACACATCCTATGTTCTTGAGGCTGTTGGAGCAAGCAGCTGAGGAGTATGGGTTTGATCATGAAGGTGCATTGACAATCCCATGTCAGCCATGTGAGGTTGAGAATATTTTGGCTGAGCAATGGAAGTTAGAGTCTAAAAGAGATTCTAGAGATGCATTTACTTGGGGAACTTTGTGTAAAGCCATTATTCAAAGTTATTGA

Coding sequence (CDS)

ATGGCCAAGTCTAGAAGCATGAAGAGAAAGAACGGTATCAAGGTCGTCGTTGAGAAGTTGCAAAAGAGCCTATCTCGAGGTCGAAAACCGAGTAGTAAGAATAGTTATGAGGATTTCGATGAAGTTGTGGACTCGACGTCGGTACCAGAGGACGTGAAAGAAGGGCATTTTGCAGTGGTGGCGGTGGACGGGGAGGAGCCGAAACGATTCGTTGTTCCGTTGAGTTGTTTGACACATCCTATGTTCTTGAGGCTGTTGGAGCAAGCAGCTGAGGAGTATGGGTTTGATCATGAAGGTGCATTGACAATCCCATGTCAGCCATGTGAGGTTGAGAATATTTTGGCTGAGCAATGGAAGTTAGAGTCTAAAAGAGATTCTAGAGATGCATTTACTTGGGGAACTTTGTGTAAAGCCATTATTCAAAGTTATTGA

Protein sequence

MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKLESKRDSRDAFTWGTLCKAIIQSY

Homology

[Close]

BLAST of CmoCh13G002360 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-11
Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 44  DSTSVPEDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTI 103
           D + +P DV +GHF V    GE   R++VP+SCL HP F  LL+++ EE+GF+H+  + I
Sbjct: 31  DDSGLPNDVPKGHFVVYV--GERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIII 90

Query: 104 PCQ 107
           PCQ
Sbjct: 91  PCQ 91

[Close]

BLAST of CmoCh13G002360 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 44  DSTSVPEDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTI 103
           D   +P DV +GHF V    GE   R++VP+S LTHP F  LL++A EE+GFDH+  LTI
Sbjct: 35  DEDCLPLDVPKGHFPVYV--GENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTI 94

Query: 104 PC 106
           PC
Sbjct: 95  PC 94

[Close]

BLAST of CmoCh13G002360 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-10
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 50  EDVKEGHFAV-VAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPC 109
           +DV +G  A+ V   GEE +RF+VP+    HP+F++LL++A +EYGFD +G +TIPC   
Sbjct: 22  KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 110 EVENILA 116
           E   + A
Sbjct: 82  EFRYVQA 88

[Close]

BLAST of CmoCh13G002360 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.8e-09
Identity = 41/107 (38.32%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNS--YEDFDEVVDSTSVPEDVKEGHFA 60
           MA  RS K  +     ++++ K  S  RK  + N   Y   D+      +P+DV +GHF 
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDD------LPQDVPKGHFP 60

Query: 61  VVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPC 106
           V    G    R++VP+S L H  F  LL  A EE+GFDH+  LTIPC
Sbjct: 61  VYV--GPNRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPC 99

[Close]

BLAST of CmoCh13G002360 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.8e-09
Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 52  VKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVE 111
           V EGH  V    G E +RFVV    L HP+F+ LL+Q+A+EYG++ +G L IPC     E
Sbjct: 38  VPEGHVPVYV--GHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFE 97

Query: 112 NIL 115
            IL
Sbjct: 98  RIL 98

[Close]

BLAST of CmoCh13G002360 vs. ExPASy TrEMBL
Match: A0A6J1HKE4 (auxin-responsive protein SAUR72-like OS=Cucurbita moschata OX=3662 GN=LOC111464912 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.3e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60
           MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV
Sbjct: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60

Query: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120
           AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL
Sbjct: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120

Query: 121 ESKRDSRDAFTWGTLCKAIIQSY 144
           ESKRDSRDAFTWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAFTWGTLCKAIIQSY 143

[Close]

BLAST of CmoCh13G002360 vs. ExPASy TrEMBL
Match: A0A6J1I062 (auxin-responsive protein SAUR72-like OS=Cucurbita maxima OX=3661 GN=LOC111469290 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.4e-74
Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60
           MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPS++NSYEDFDEVVDSTSVPEDVKEGHFAVV
Sbjct: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSNENSYEDFDEVVDSTSVPEDVKEGHFAVV 60

Query: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120
           AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL
Sbjct: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120

Query: 121 ESKRDSRDAFTWGTLCKAIIQSY 144
           ESKRDSRDAFTWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAFTWGTLCKAIIQSY 143

[Close]

BLAST of CmoCh13G002360 vs. ExPASy TrEMBL
Match: A0A0A0LSM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G103250 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 127/143 (88.81%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60
           MAKS++MK+KN IKVVVEKLQKSLSRGRKP + +  EDFDE+VDST+VPEDVKEGHFAVV
Sbjct: 1   MAKSKTMKKKNSIKVVVEKLQKSLSRGRKPINGHYNEDFDELVDSTAVPEDVKEGHFAVV 60

Query: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120
           AVDG+EPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQP EVE ILAEQWKL
Sbjct: 61  AVDGKEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120

Query: 121 ESKRDSRDAFTWGTLCKAIIQSY 144
           ESKRDSRDA TWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAITWGTLCKAIIQSY 143

[Close]

BLAST of CmoCh13G002360 vs. ExPASy TrEMBL
Match: A0A5D3DDN6 (Auxin-responsive protein SAUR72-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00580 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.2e-64
Identity = 125/143 (87.41%), Postives = 134/143 (93.71%), Query Frame = 0


Query: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60
           MAKS++MK+KN IKVVVEKLQKSLSRGRKP + +  EDFDE+VDST+VPEDVKEGHFAVV
Sbjct: 1   MAKSKTMKKKNSIKVVVEKLQKSLSRGRKPINGHYNEDFDELVDSTAVPEDVKEGHFAVV 60

Query: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120
           AVDGE+P+RFVVPLSCLTHP FLRLLEQAAEEYGFDHEGALTIPCQP EVE ILAEQWKL
Sbjct: 61  AVDGEKPRRFVVPLSCLTHPTFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120

Query: 121 ESKRDSRDAFTWGTLCKAIIQSY 144
           ESKRDSRDA TWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAVTWGTLCKAIIQSY 143

[Close]

BLAST of CmoCh13G002360 vs. ExPASy TrEMBL
Match: A0A1S3CK34 (auxin-responsive protein SAUR72-like OS=Cucumis melo OX=3656 GN=LOC103501357 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.2e-64
Identity = 125/143 (87.41%), Postives = 134/143 (93.71%), Query Frame = 0


Query: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60
           MAKS++MK+KN IKVVVEKLQKSLSRGRKP + +  EDFDE+VDST+VPEDVKEGHFAVV
Sbjct: 1   MAKSKTMKKKNSIKVVVEKLQKSLSRGRKPINGHYNEDFDELVDSTAVPEDVKEGHFAVV 60

Query: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120
           AVDGE+P+RFVVPLSCLTHP FLRLLEQAAEEYGFDHEGALTIPCQP EVE ILAEQWKL
Sbjct: 61  AVDGEKPRRFVVPLSCLTHPTFLRLLEQAAEEYGFDHEGALTIPCQPSEVEKILAEQWKL 120

Query: 121 ESKRDSRDAFTWGTLCKAIIQSY 144
           ESKRDSRDA TWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAVTWGTLCKAIIQSY 143

[Close]

BLAST of CmoCh13G002360 vs. NCBI nr
Match: XP_022964961.1 (auxin-responsive protein SAUR72-like [Cucurbita moschata])

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60
           MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV
Sbjct: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60

Query: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120
           AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL
Sbjct: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120

Query: 121 ESKRDSRDAFTWGTLCKAIIQSY 144
           ESKRDSRDAFTWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAFTWGTLCKAIIQSY 143

[Close]

BLAST of CmoCh13G002360 vs. NCBI nr
Match: XP_023520338.1 (auxin-responsive protein SAUR72-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.5 bits (737), Expect = 3.2e-74
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60
           MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSS+NSYEDFDEVVDSTSVPEDVKEGHFAVV
Sbjct: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVV 60

Query: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120
           AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL
Sbjct: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120

Query: 121 ESKRDSRDAFTWGTLCKAIIQSY 144
           ESKRDSRDAFTWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAFTWGTLCKAIIQSY 143

[Close]

BLAST of CmoCh13G002360 vs. NCBI nr
Match: XP_022970276.1 (auxin-responsive protein SAUR72-like [Cucurbita maxima])

HSP 1 Score: 287.3 bits (734), Expect = 7.0e-74
Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60
           MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPS++NSYEDFDEVVDSTSVPEDVKEGHFAVV
Sbjct: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSNENSYEDFDEVVDSTSVPEDVKEGHFAVV 60

Query: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120
           AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL
Sbjct: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120

Query: 121 ESKRDSRDAFTWGTLCKAIIQSY 144
           ESKRDSRDAFTWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAFTWGTLCKAIIQSY 143

[Close]

BLAST of CmoCh13G002360 vs. NCBI nr
Match: KAG7019267.1 (hypothetical protein SDJN02_18227, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.8 bits (730), Expect = 2.0e-73
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60
           MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSS+NSYEDFDEVVDSTSVPEDVKEGHFAVV
Sbjct: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPEDVKEGHFAVV 60

Query: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120
           AVDGE PKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL
Sbjct: 61  AVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120

Query: 121 ESKRDSRDAFTWGTLCKAIIQSY 144
           ESKRDSRDAFTWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAFTWGTLCKAIIQSY 143

[Close]

BLAST of CmoCh13G002360 vs. NCBI nr
Match: KAG6583559.1 (hypothetical protein SDJN03_19491, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.3 bits (726), Expect = 6.0e-73
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVV 60
           MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSS+NSYEDFDEVVDSTSVP+DVKEGHFAVV
Sbjct: 1   MAKSRSMKRKNGIKVVVEKLQKSLSRGRKPSSENSYEDFDEVVDSTSVPKDVKEGHFAVV 60

Query: 61  AVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120
           AVDGE PKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL
Sbjct: 61  AVDGEGPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENILAEQWKL 120

Query: 121 ESKRDSRDAFTWGTLCKAIIQSY 144
           ESKRDSRDAFTWGTLCKAIIQSY
Sbjct: 121 ESKRDSRDAFTWGTLCKAIIQSY 143

[Close]

BLAST of CmoCh13G002360 vs. TAIR 10
Match: AT2G28085.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 4.6e-23
Identity = 64/126 (50.79%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 1   MAKSRSMKRKNG----IKVVVEKLQ--KSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKE 60
           M    S K+K G    +K VVE+L   K  S  +KP  +    D         VP+DVKE
Sbjct: 6   MITIESPKKKMGGIVKLKNVVERLVQIKGFSSAKKPCPEEYGRD--------CVPKDVKE 65

Query: 61  GHFAVVAVDG--EEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVEN 119
           GHFAV+AVDG  E  +RFVVPL  L HPMF +LLEQA EEYGF H+GAL +PC+P  +  
Sbjct: 66  GHFAVIAVDGYHEPTQRFVVPLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPCRPSHLRM 123

[Close]

BLAST of CmoCh13G002360 vs. TAIR 10
Match: AT3G09870.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19
Identity = 53/102 (51.96%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 14  KVVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTS-VPEDVKEGHFAVVAVDGEEPKRFVV 73
           K+ + KLQ      R      +Y +F+E  ++ S +P DVKEGH AV+AV GE  KRFV+
Sbjct: 6   KIFMRKLQICCLFTRFSKRVGNYCEFEEEGNAASMIPSDVKEGHVAVIAVKGERIKRFVL 65

Query: 74  PLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENIL 115
            L  L  P FLRLLEQA EE+GF   G LTIPCQP EV+ IL
Sbjct: 66  ELEELNKPEFLRLLEQAREEFGFQPRGPLTIPCQPEEVQKIL 107

[Close]

BLAST of CmoCh13G002360 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-13
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 40  DEVVDSTSVPEDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEG 99
           ++  D   +P DV +GHF V    GE+  R++VP+S LTHP F  LL+QA EE+GF+H+ 
Sbjct: 28  NQCYDEDGLPVDVPKGHFPVYV--GEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDM 87

Query: 100 ALTIPCQ 107
            LTIPC+
Sbjct: 88  GLTIPCE 92

[Close]

BLAST of CmoCh13G002360 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 72.4 bits (176), Expect = 3.3e-13
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 0


Query: 15  VVVEKLQKSLSRGRKPSSKNSYEDFDEVVDSTSVPEDVKEGHFAVVAVDGEEPKRFVVPL 74
           ++ + L++  S G+K SS+  Y D  E  D  S+P DV +GHF V    G    R+V+P+
Sbjct: 14  MIKQILKRCSSLGKKQSSE--YNDTHE-HDGDSLPLDVPKGHFVVYV--GGNRVRYVLPI 73

Query: 75  SCLTHPMFLRLLEQAAEEYGFDHEGALTIPCQPCEVENIL 115
           S LT P F  LL+QA EE+GFDH   LTIPC+    ++++
Sbjct: 74  SFLTRPEFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLI 108

[Close]

BLAST of CmoCh13G002360 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.9 bits (172), Expect = 9.6e-13
Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 44  DSTSVPEDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHE-GALT 103
           D   +P DV +GHF V    GE+  R++VP+S LTHP FL LL+QA EE+GF H+ G LT
Sbjct: 32  DEEGLPLDVPKGHFPVYV--GEKRTRYIVPISFLTHPEFLILLQQAEEEFGFRHDMGGLT 91

Query: 104 IPCQ 107
           IPC+
Sbjct: 92  IPCE 93

The following BLAST results are available for this feature:

BLAST of CmoCh13G002360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DKL1	1.0e-11	47.62	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
O65695	1.4e-11	53.23	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9ZUZ3	2.6e-10	44.78	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
Q9SL45	4.8e-09	38.32	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
Q9SGU2	4.8e-09	47.62	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]

BLAST of CmoCh13G002360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKE4	5.3e-75	100.00	auxin-responsive protein SAUR72-like OS=Cucurbita moschata OX=3662 GN=LOC1114649...	[more]
A0A6J1I062	3.4e-74	98.60	auxin-responsive protein SAUR72-like OS=Cucurbita maxima OX=3661 GN=LOC111469290...	[more]
A0A0A0LSM9	2.2e-65	88.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G103250 PE=3 SV=1	[more]
A0A5D3DDN6	3.2e-64	87.41	Auxin-responsive protein SAUR72-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CK34	3.2e-64	87.41	auxin-responsive protein SAUR72-like OS=Cucumis melo OX=3656 GN=LOC103501357 PE=...	[more]

BLAST of CmoCh13G002360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964961.1	1.1e-74	100.00	auxin-responsive protein SAUR72-like [Cucurbita moschata]	[more]
XP_023520338.1	3.2e-74	99.30	auxin-responsive protein SAUR72-like [Cucurbita pepo subsp. pepo]	[more]
XP_022970276.1	7.0e-74	98.60	auxin-responsive protein SAUR72-like [Cucurbita maxima]	[more]
KAG7019267.1	2.0e-73	98.60	hypothetical protein SDJN02_18227, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6583559.1	6.0e-73	97.90	hypothetical protein SDJN03_19491, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh13G002360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28085.1	4.6e-23	50.79	SAUR-like auxin-responsive protein family	[more]
AT3G09870.1	1.4e-19	51.96	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	2.5e-13	49.25	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	3.3e-13	42.00	SAUR-like auxin-responsive protein family	[more]
AT4G38860.1	9.6e-13	54.69	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 26..114 e-value: 1.6E-21 score: 76.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..42
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 16..124
None	No IPR available	PANTHER	PTHR31374:SF334	AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE	coord: 16..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G002360.1	CmoCh13G002360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin