CmoCh13G000940 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G000940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr13: 550445 .. 552303 (+)
RNA-Seq Expression	CmoCh13G000940
Synteny	CmoCh13G000940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCTCTCGCGGGTTGGTGAAGCTATTTTAGTACGTCCATTCTTGAGGAAGATCCACGTCGATTTGGCTGGTCGCCGCCGTTGTCGCCGCCTCCGCCGCCGCTGTCGCTGTCGCTTCCAGATGACTTTTCTTATCGGTATGTGACTTTGTTCTGGCACTAGCCGCAGCTTCTGTTAAACAAGAAACATAAATGAATAACAAATAGGAAGAATCTGTCGTCATTAGCCGTAGCTTCTGTTAAACAAGAACATAAATGAATAATTAAATAGGAATCTCTAGTCAGATGATAAGAGAATCAACCAGATCGAATAGAGACATAGAAGTGGGTAAGCGAGCAATTATGTGTGGAACGACCGCAAACTGTTTGTGAAAATGCCACAGAGAATTTTGTGATAGGAAATTGAAAATTTACCTCTTAAAGCTGTGAAGCCAGTGATCTTTTCTCTTGTCTCGTTGTCCATTCTGTCGTAGTGAAGTTGTAAGGCTTGTAGGACTCTCACGGGTATTAGAACAGTGGAGCAGCCTGAGATAGGGAAGGGGAGGGAAAATGATCAATTTGCTTAGTGTTTTGCCTTGTATGGGAAGACAACGCATCTCCATTACAGAATTTAACTATAGCGGGCAGTGCAAGTGGTTTAATGATTCAATTGGGTGTCGTTGTCAGCCACCTCCTTTTAAAGGGATGGTTGAAGATTCCATCAAAGAAGTGGACAAGTTTTGTCGGCCCAACCGTGAATGGTTGGAGGTCTTGTAGATTCAAAGCATTTGGGAGGACACGGAATCTCTATGAATCCAAGGAAAGATAAGAAAAATAAAAGGAGCGGTATGAGGAGAAGTCCCAAAATGCATCACAGTAATGGTTTCAATGGCAATTCATAGATGGAAAATCCCAACAAATGGGTTGTGAGATGCCACGTCCGTTGGAGAGAGGAACGAAACATTACTTATAAGGGTGTGGAAACCTCTCCCTAACAGACGCGTTTTAAAACCGCAAGGCTGACAGCAATAGGTAATGAGCCGAAGCGGACAATATCTGCTACCGGTGAGCTTGGACTACTACAAATGGTATCAGAGCCAGACACCGAACGGTATGCTAGCGAGGACGTTGGGTCCCCAAAGGAGGTGAATTGTGAGATCTCACATCGGTTGGAGAGAAGAACAAAACATTCCTTAAGGTGTGGAAACCTCTATAGACGAGTTTTAAAACCGTGAAACAGACAGCAATAGATAACGGGTTAAAAGCAAACGACATCTAATAGTGATGGACTTGGACTGTTACACGAGGTTAACTCCAACTAAGAAATGACTTAAAAAACCAGCTACTTATTGAATGAAAGGAGATATTACCCTTTTTCTTGGGCGGCTGTGGTGGCTGAGGACATGGTGCTGGACGGTTGTAGTTGACATGGCGGGGCAAGAACACTCCTGTCCCCGATGACCCTCCTCCTGGTTTTGCCCCTGAATTGGCTTGTGAGGTGCTTCCTTGAGCCTGCTTGGCTTGTGTCGCGGCGGAGCTTTTTTGCTTCATAAACTGCTGCTGCTGCTGGTTCTGCCTCCGCTTCTGATTCTACAAGGAGGGTTGAGTTTTGAATCAGCAAAAAAAGAGTGTAAGAAACAGAGAGATTTGGGAGCTGAGGGGGCTGAGATGGATTTGAATTTCATCTCACTTTGGAAGAGGAAGATCTGGTTCCTCCATGTTGGGGGCTTGTTTGGATTGATTTATCATTTGTGCTAAATTTTTTCATCTTCTCCAGTTTGCTGAAAACGTTGTGTGAAATATCCAGCCCTCCACGCTCTACAACCACCGGCGTCGATGGCGGCGATGGCTCCTTGGAAGGCCCTTCTGGACTTCCGTAG

mRNA sequence

ATGCCCTCTCGCGGTACGTCCATTCTTGAGGAAGATCCACGTCGATTTGGCTGGTCGCCGCCGTTGTCGCCGCCTCCGCCGCCGCTGTCGCTGTCGCTTCCAGATGACTTTTCTTATCGTTTGCTGAAAACGTTGTGTGAAATATCCAGCCCTCCACGCTCTACAACCACCGGCGTCGATGGCGGCGATGGCTCCTTGGAAGGCCCTTCTGGACTTCCGTAG

Coding sequence (CDS)

ATGCCCTCTCGCGGTACGTCCATTCTTGAGGAAGATCCACGTCGATTTGGCTGGTCGCCGCCGTTGTCGCCGCCTCCGCCGCCGCTGTCGCTGTCGCTTCCAGATGACTTTTCTTATCGTTTGCTGAAAACGTTGTGTGAAATATCCAGCCCTCCACGCTCTACAACCACCGGCGTCGATGGCGGCGATGGCTCCTTGGAAGGCCCTTCTGGACTTCCGTAG

Protein sequence

MPSRGTSILEEDPRRFGWSPPLSPPPPPLSLSLPDDFSYRLLKTLCEISSPPRSTTTGVDGGDGSLEGPSGLP

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh13G000940 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh13G000940 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh13G000940 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh13G000940 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G000940.1	CmoCh13G000940.1	mRNA