CmoCh13G000410 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G000410
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-H2 finger protein ATL63-like
Location	Cmo_Chr13: 262347 .. 263153 (-)
RNA-Seq Expression	CmoCh13G000410
Synteny	CmoCh13G000410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCAATTCCACTTCGCTGATCGGTTTCGCTCAGAGCATATTCTCCTACAACAGCAACATCATGCTCGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCAGCCTCGCCACCGCCGGACTTCTGTCACTGTCTCCTACGTCCTCGGTCCGCCTCGCCTCTCGCGTTTTGATTCGGTTCCATTCGATTCAGGCGCCGCTCCGTCGAAAGGCCTCGATCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCGCGGCGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAGCTTGGACGAAGATTGCCGAAATGTAGCCATGGATTTCACCTTGAGTGTATCGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGCGCCGGTGCTTGGCGACGCCGCGGATTGTTCCGATGCGGTAGAATCCGGCCGGTTGAGTGGCGAGAGGGAAATCGGAGGAGAGATTGTAACGGAGGAGCGGCGCAATTGTGAGATTCAGAGAAACGAGGGGCAAAACGGTCAGTTTCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCTTTATCTTCGTCGAGTTCTTCGACTGATCAGCCATTGATGTCGCTTGGAGCGTCTTTGAAACGAATGTTGAGCAGAAACAGATCGGACGGGAGGATTTTCCCCTCCTCCGATGGCGACGAATTGGATGTTTGA

mRNA sequence

ATGGCGTTCAATTCCACTTCGCTGATCGGTTTCGCTCAGAGCATATTCTCCTACAACAGCAACATCATGCTCGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCAGCCTCGCCACCGCCGGACTTCTGTCACTGTCTCCTACGTCCTCGGTCCGCCTCGCCTCTCGCGTTTTGATTCGGTTCCATTCGATTCAGGCGCCGCTCCGTCGAAAGGCCTCGATCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCGCGGCGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAGCTTGGACGAAGATTGCCGAAATGTAGCCATGGATTTCACCTTGAGTGTATCGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGCGCCGGTGCTTGGCGACGCCGCGGATTGTTCCGATGCGGTAGAATCCGGCCGGTTGAGTGGCGAGAGGGAAATCGGAGGAGAGATTGTAACGGAGGAGCGGCGCAATTGTGAGATTCAGAGAAACGAGGGGCAAAACGGTCAGTTTCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCTTTATCTTCGTCGAGTTCTTCGACTGATCAGCCATTGATGTCGCTTGGAGCGTCTTTGAAACGAATGTTGAGCAGAAACAGATCGGACGGGAGGATTTTCCCCTCCTCCGATGGCGACGAATTGGATGTTTGA

Coding sequence (CDS)

ATGGCGTTCAATTCCACTTCGCTGATCGGTTTCGCTCAGAGCATATTCTCCTACAACAGCAACATCATGCTCGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCAGCCTCGCCACCGCCGGACTTCTGTCACTGTCTCCTACGTCCTCGGTCCGCCTCGCCTCTCGCGTTTTGATTCGGTTCCATTCGATTCAGGCGCCGCTCCGTCGAAAGGCCTCGATCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCGCGGCGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAGCTTGGACGAAGATTGCCGAAATGTAGCCATGGATTTCACCTTGAGTGTATCGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGCGCCGGTGCTTGGCGACGCCGCGGATTGTTCCGATGCGGTAGAATCCGGCCGGTTGAGTGGCGAGAGGGAAATCGGAGGAGAGATTGTAACGGAGGAGCGGCGCAATTGTGAGATTCAGAGAAACGAGGGGCAAAACGGTCAGTTTCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCTTTATCTTCGTCGAGTTCTTCGACTGATCAGCCATTGATGTCGCTTGGAGCGTCTTTGAAACGAATGTTGAGCAGAAACAGATCGGACGGGAGGATTTTCCCCTCCTCCGATGGCGACGAATTGGATGTTTGA

Protein sequence

MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIGGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV

Homology

[Close]

BLAST of CmoCh13G000410 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.5e-29
Identity = 111/283 (39.22%), Postives = 150/283 (53.00%), Query Frame = 0


Query: 6   TSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP---------------Q 65
           +SL  F + + SYNSN++LAAL+ LLLVVLFVLLLH YA  F+                +
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  PRHRRTSVTVSYVLGPPRLSRFD---SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKC 125
            R+RR +VT + ++    L  FD   S P  +     KGLD SVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 AAVMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAAD--- 185
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH++CP+CR+PVL   +D   
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

Query: 186 ---CSDAVE---------------SGRLSGEREIG------------GEIVTEERRNCEI 236
                +AVE                  +SG+R +             G+   EE    E+
Sbjct: 193 LKLAVNAVEEEAEVRLQMSPAGENESNVSGDRRVSLSLSVMEDDLKTGDDDGEEEVRIEV 252

[Close]

BLAST of CmoCh13G000410 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.6e-21
Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 0


Query: 9   IGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPR 68
           +    S ++ N  IML+++I L + V+ +L  H+YA   F +   R      S+      
Sbjct: 15  VSHTSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSH------ 74

Query: 69  LSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYES------EEKKCAAVMECVICLSEFEE 128
           L    + P D      + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 75  LRTLSASPRD------QALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 134

Query: 129 RELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPV 159
            + GR LPKC H FH++CID W  S ++CP+CRAPV
Sbjct: 135 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of CmoCh13G000410 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.1e-17
Identity = 78/211 (36.97%), Postives = 109/211 (51.66%), Query Frame = 0


Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFD 73
           S +S N  IMLA++I L + V+ +L  H+YA   F + ++RR    +S  L     +R D
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLF-RRQNRRIRRRISAHLRSLAAAR-D 79

Query: 74  SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGRRLPKCS 133
                S  +P   LDP+V+  IP+FVY  +  + + + EC +CLSEFEE + GR LPKC 
Sbjct: 80  PTQSSSSLSP---LDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLPKCG 139

Query: 134 HGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIGGEIVTEERRNCE 193
           H FH++CID W  S +SCP+CRAPV                        + VTE      
Sbjct: 140 HVFHVDCIDTWFRSRSSCPLCRAPVQ---------------------PAQPVTEPEPVAA 199

Query: 194 IQRNEGQNGQFHSSSSSSSSSSSSSSSSSSS 225
           +  +        + SSSSS  S SS+ SSSS
Sbjct: 200 VFPSVKPIEDTEAGSSSSSDESESSTPSSSS 203

[Close]

BLAST of CmoCh13G000410 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 5.3e-17
Identity = 80/260 (30.77%), Postives = 126/260 (48.46%), Query Frame = 0


Query: 16  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR--------RTSVTVSYVLGPP 75
           ++ +  IML+A++ L  VV+ ++ LH YA  +  + R R        R +  V +   P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  RLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGR 135
             +        +    S+GLDP+VI ++P+F +  E  K    +EC +CLSEFEE E GR
Sbjct: 84  TAA--------TSVVASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGR 143

Query: 136 RLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIGGEIVTE 195
            LP C H FH++CIDMW +SH++CP+CR+ V     +    +ES   + ERE+   + ++
Sbjct: 144 VLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV-----ESLAGIESTAAAREREVVIAVDSD 203

Query: 196 ERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSL---------------SSSSSS 253
                E   + G   + H S SS      S    ++  +                S +S 
Sbjct: 204 PVLVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQ 263

[Close]

BLAST of CmoCh13G000410 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.5e-15
Identity = 77/244 (31.56%), Postives = 119/244 (48.77%), Query Frame = 0


Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFD 73
           S +  NS IMLAA+ SL  V+L V  LH YA       R RR +       G P + R  
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL---RRRREAFR-----GLPVIFRH- 82

Query: 74  SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGRRLPKCS 133
             PF+    P +GL+P+VI+++P F   + +   A+  EC +CLS  +E++  R LP C 
Sbjct: 83  --PFE---MPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCK 142

Query: 134 HGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIGGEIVTEERRNCE 193
           H FH++C+D WL + ++CPVCR  V     +    +E     G      +++ E R N  
Sbjct: 143 HIFHVDCVDTWLTTCSTCPVCRTEV-----EPRPRLEPEPREGPVGTAPQLLVETRLNLT 202

Query: 194 IQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSLGASLKRMLSRNRS 253
           ++            ++SSSSS + +  S +S L+               S +++L+R RS
Sbjct: 203 VE------------AASSSSSDNKTVVSPASRLN---------------SFRKILTRERS 220

Query: 254 DGRI 258
             RI
Sbjct: 263 SNRI 220

[Close]

BLAST of CmoCh13G000410 vs. ExPASy TrEMBL
Match: A0A6J1HPE0 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.3e-135
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSL 240
           GGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSL
Sbjct: 181 GGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSL 240

Query: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 269
           GASLKRMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 268

[Close]

BLAST of CmoCh13G000410 vs. ExPASy TrEMBL
Match: A0A6J1HZJ3 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.1e-129
Identity = 255/268 (95.15%), Postives = 256/268 (95.52%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKC AVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSL 240
           GGEIVTEER NCEIQRNEGQNGQF+         S SSSSSSSSSLSSSSSSTDQPLMSL
Sbjct: 181 GGEIVTEERSNCEIQRNEGQNGQFY---------SDSSSSSSSSSLSSSSSSTDQPLMSL 240

Query: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 269
           GASLKRMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 259

[Close]

BLAST of CmoCh13G000410 vs. ExPASy TrEMBL
Match: A0A6J1GBH1 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 1.1e-105
Identity = 216/271 (79.70%), Postives = 231/271 (85.24%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60
           MAFNSTSL  F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICL 120
           VTVSYVLGPPRLSRF+S+PFD G A SKGLD SVISAIPLFVYESEEKKCA VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGE 180
           SEFEERE+GRRLP C+HGFHLECIDMWLNSHA+CPVCRAPV+      ++AVESGRLSGE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVV------AEAVESGRLSGE 180

Query: 181 REIGGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPL 240
           REIG EIVTEER NCEIQRNE QNGQFHSSS                  SSSSSSTD PL
Sbjct: 181 REIGEEIVTEERTNCEIQRNEEQNGQFHSSS------------------SSSSSSTDPPL 240

Query: 241 MSLGASLKRMLSRNRSDGRIFPSSDGDELDV 269
           MSLGASLKRMLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 MSLGASLKRMLSRNRSNGRIFPSSNGDELNV 247

[Close]

BLAST of CmoCh13G000410 vs. ExPASy TrEMBL
Match: A0A6J1KH83 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111493195 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.7e-104
Identity = 213/271 (78.60%), Postives = 229/271 (84.50%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60
           MAFNSTSL  F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICL 120
           VTVSYVLGPPRLSRFDS+PFD G A SKGLD SVIS IPLFVYESEEKKCA VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSIPFDLGFAQSKGLDSSVISTIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGE 180
           SEFEERE+GRRLP C+HGFHL+CIDMWLNSHA+CPVCRAPV+      ++AVES RLSGE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLDCIDMWLNSHANCPVCRAPVV------AEAVESSRLSGE 180

Query: 181 REIGGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPL 240
           REIG EIVTEER NCEIQRNE QNGQFHSSS                  SSS+SSTD PL
Sbjct: 181 REIGEEIVTEERTNCEIQRNEEQNGQFHSSS------------------SSSNSSTDPPL 240

Query: 241 MSLGASLKRMLSRNRSDGRIFPSSDGDELDV 269
           MSLGASLKRMLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 MSLGASLKRMLSRNRSNGRIFPSSNGDELNV 247

[Close]

BLAST of CmoCh13G000410 vs. ExPASy TrEMBL
Match: A0A5D3BFR6 (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00790 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.7e-95
Identity = 213/268 (79.48%), Postives = 223/268 (83.21%), Query Frame = 0


Query: 4   NSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRH-RRTSVTVSY 63
           NSTSL  FAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRH RRTSVTVSY
Sbjct: 5   NSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSY 64

Query: 64  VLGPPRLSRFDS-VPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFE 123
           VL PPRLSRFDS VPFD G+APSKGLDPSVISAIPLFVYESEEKKCAA MECVICLSEFE
Sbjct: 65  VLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSEFE 124

Query: 124 ERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIG 183
           ERELGRRLPKC HGFHLECIDMWLNSHA+CPVCR PV+G+A DCSDA E    SGE EIG
Sbjct: 125 ERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAE----SGEGEIG 184

Query: 184 GEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLM-SL 243
            E V           NEGQ+GQF+S SSSSSSSSSSSSSSSS            PLM S+
Sbjct: 185 RETV-----------NEGQSGQFNSDSSSSSSSSSSSSSSSSID--------PPPLMSSI 244

Query: 244 GASLKRMLSRNRSDGRIFPSSDGDELDV 269
           GASL R+LSRNRSDGRIFPSS+G+ELDV
Sbjct: 245 GASLIRILSRNRSDGRIFPSSNGEELDV 249

[Close]

BLAST of CmoCh13G000410 vs. NCBI nr
Match: XP_022964854.1 (RING-H2 finger protein ATL63-like [Cucurbita moschata])

HSP 1 Score: 492.3 bits (1266), Expect = 2.7e-135
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSL 240
           GGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSL
Sbjct: 181 GGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSL 240

Query: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 269
           GASLKRMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 268

[Close]

BLAST of CmoCh13G000410 vs. NCBI nr
Match: KAG6583350.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 483.8 bits (1244), Expect = 9.6e-133
Identity = 267/272 (98.16%), Postives = 267/272 (98.16%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVES RLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESDRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFH----SSSSSSSSSSSSSSSSSSSSLSSSSSSTDQP 240
           GGEIVTEERRNCEIQRNEGQNGQFH    SSSSSSSSSSSSSSSSSSSSLSSSSSSTDQP
Sbjct: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQP 240

Query: 241 LMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 269
           LMSLGASLKRMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 LMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 272

[Close]

BLAST of CmoCh13G000410 vs. NCBI nr
Match: KAG7019120.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 483.4 bits (1243), Expect = 1.3e-132
Identity = 267/273 (97.80%), Postives = 267/273 (97.80%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVES RLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESDRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFH-----SSSSSSSSSSSSSSSSSSSSLSSSSSSTDQ 240
           GGEIVTEERRNCEIQRNEGQNGQFH     SSSSSSSSSSSSSSSSSSSSLSSSSSSTDQ
Sbjct: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQ 240

Query: 241 PLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 269
           PLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 PLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 273

[Close]

BLAST of CmoCh13G000410 vs. NCBI nr
Match: XP_023519269.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.2 bits (1232), Expect = 2.4e-131
Identity = 260/268 (97.01%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQS+FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDA DCSDAVESGRLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSL 240
           GGEIVTEERRNCEIQRNEGQNGQFH     S SSSSSSSSSSSSSLSSSSSSTDQPLMSL
Sbjct: 181 GGEIVTEERRNCEIQRNEGQNGQFH-----SDSSSSSSSSSSSSSLSSSSSSTDQPLMSL 240

Query: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 269
           GASLKRMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 263

[Close]

BLAST of CmoCh13G000410 vs. NCBI nr
Match: XP_022970592.1 (RING-H2 finger protein ATL63-like [Cucurbita maxima])

HSP 1 Score: 471.1 bits (1211), Expect = 6.4e-129
Identity = 255/268 (95.15%), Postives = 256/268 (95.52%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKC AVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSL 240
           GGEIVTEER NCEIQRNEGQNGQF+         S SSSSSSSSSLSSSSSSTDQPLMSL
Sbjct: 181 GGEIVTEERSNCEIQRNEGQNGQFY---------SDSSSSSSSSSLSSSSSSTDQPLMSL 240

Query: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 269
           GASLKRMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 259

[Close]

BLAST of CmoCh13G000410 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 130.2 bits (326), Expect = 2.5e-30
Identity = 111/283 (39.22%), Postives = 150/283 (53.00%), Query Frame = 0


Query: 6   TSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP---------------Q 65
           +SL  F + + SYNSN++LAAL+ LLLVVLFVLLLH YA  F+                +
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  PRHRRTSVTVSYVLGPPRLSRFD---SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKC 125
            R+RR +VT + ++    L  FD   S P  +     KGLD SVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 AAVMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAAD--- 185
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH++CP+CR+PVL   +D   
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

Query: 186 ---CSDAVE---------------SGRLSGEREIG------------GEIVTEERRNCEI 236
                +AVE                  +SG+R +             G+   EE    E+
Sbjct: 193 LKLAVNAVEEEAEVRLQMSPAGENESNVSGDRRVSLSLSVMEDDLKTGDDDGEEEVRIEV 252

[Close]

BLAST of CmoCh13G000410 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 3.3e-22
Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 0


Query: 9   IGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPR 68
           +    S ++ N  IML+++I L + V+ +L  H+YA   F +   R      S+      
Sbjct: 15  VSHTSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSH------ 74

Query: 69  LSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYES------EEKKCAAVMECVICLSEFEE 128
           L    + P D      + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 75  LRTLSASPRD------QALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 134

Query: 129 RELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPV 159
            + GR LPKC H FH++CID W  S ++CP+CRAPV
Sbjct: 135 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of CmoCh13G000410 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-18
Identity = 78/211 (36.97%), Postives = 109/211 (51.66%), Query Frame = 0


Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFD 73
           S +S N  IMLA++I L + V+ +L  H+YA   F + ++RR    +S  L     +R D
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLF-RRQNRRIRRRISAHLRSLAAAR-D 79

Query: 74  SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGRRLPKCS 133
                S  +P   LDP+V+  IP+FVY  +  + + + EC +CLSEFEE + GR LPKC 
Sbjct: 80  PTQSSSSLSP---LDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLPKCG 139

Query: 134 HGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIGGEIVTEERRNCE 193
           H FH++CID W  S +SCP+CRAPV                        + VTE      
Sbjct: 140 HVFHVDCIDTWFRSRSSCPLCRAPVQ---------------------PAQPVTEPEPVAA 199

Query: 194 IQRNEGQNGQFHSSSSSSSSSSSSSSSSSSS 225
           +  +        + SSSSS  S SS+ SSSS
Sbjct: 200 VFPSVKPIEDTEAGSSSSSDESESSTPSSSS 203

[Close]

BLAST of CmoCh13G000410 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 89.7 bits (221), Expect = 3.8e-18
Identity = 80/260 (30.77%), Postives = 126/260 (48.46%), Query Frame = 0


Query: 16  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR--------RTSVTVSYVLGPP 75
           ++ +  IML+A++ L  VV+ ++ LH YA  +  + R R        R +  V +   P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  RLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGR 135
             +        +    S+GLDP+VI ++P+F +  E  K    +EC +CLSEFEE E GR
Sbjct: 84  TAA--------TSVVASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGR 143

Query: 136 RLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIGGEIVTE 195
            LP C H FH++CIDMW +SH++CP+CR+ V     +    +ES   + ERE+   + ++
Sbjct: 144 VLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV-----ESLAGIESTAAAREREVVIAVDSD 203

Query: 196 ERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSL---------------SSSSSS 253
                E   + G   + H S SS      S    ++  +                S +S 
Sbjct: 204 PVLVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQ 263

[Close]

BLAST of CmoCh13G000410 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 6.0e-16
Identity = 77/244 (31.56%), Postives = 119/244 (48.77%), Query Frame = 0


Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFD 73
           S +  NS IMLAA+ SL  V+L V  LH YA       R RR +       G P + R  
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL---RRRREAFR-----GLPVIFRH- 82

Query: 74  SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGRRLPKCS 133
             PF+    P +GL+P+VI+++P F   + +   A+  EC +CLS  +E++  R LP C 
Sbjct: 83  --PFE---MPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCK 142

Query: 134 HGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIGGEIVTEERRNCE 193
           H FH++C+D WL + ++CPVCR  V     +    +E     G      +++ E R N  
Sbjct: 143 HIFHVDCVDTWLTTCSTCPVCRTEV-----EPRPRLEPEPREGPVGTAPQLLVETRLNLT 202

Query: 194 IQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSLGASLKRMLSRNRS 253
           ++            ++SSSSS + +  S +S L+               S +++L+R RS
Sbjct: 203 VE------------AASSSSSDNKTVVSPASRLN---------------SFRKILTRERS 220

Query: 254 DGRI 258
             RI
Sbjct: 263 SNRI 220

The following BLAST results are available for this feature:

BLAST of CmoCh13G000410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUZ9	3.5e-29	39.22	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]
O22255	4.6e-21	38.46	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9LZJ6	4.1e-17	36.97	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q8L9T5	5.3e-17	30.77	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9SLC3	8.5e-15	31.56	E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ...	[more]

BLAST of CmoCh13G000410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HPE0	1.3e-135	100.00	RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 ...	[more]
A0A6J1HZJ3	3.1e-129	95.15	RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE...	[more]
A0A6J1GBH1	1.1e-105	79.70	RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 ...	[more]
A0A6J1KH83	2.7e-104	78.60	RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111493195 PE...	[more]
A0A5D3BFR6	1.7e-95	79.48	RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of CmoCh13G000410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964854.1	2.7e-135	100.00	RING-H2 finger protein ATL63-like [Cucurbita moschata]	[more]
KAG6583350.1	9.6e-133	98.16	RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7019120.1	1.3e-132	97.80	RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_023519269.1	2.4e-131	97.01	RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo]	[more]
XP_022970592.1	6.4e-129	95.15	RING-H2 finger protein ATL63-like [Cucurbita maxima]	[more]

BLAST of CmoCh13G000410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58580.1	2.5e-30	39.22	TOXICOS EN LEVADURA 63	[more]
AT2G47560.1	3.3e-22	38.46	RING/U-box superfamily protein	[more]
AT3G62690.1	2.9e-18	36.97	AtL5	[more]
AT3G16720.1	3.8e-18	30.77	TOXICOS EN LEVADURA 2	[more]
AT2G42360.1	6.0e-16	31.56	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 113..154 e-value: 1.1E-6 score: 38.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 112..155 e-value: 5.3E-12 score: 45.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 113..155 score: 12.54829
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 78..159 e-value: 8.7E-22 score: 78.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..268
None	No IPR available	PANTHER	PTHR14155:SF514	CHROMATIN REGULATOR PHD FAMILY-RELATED	coord: 9..263
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 9..263
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 112..155 e-value: 1.14273E-18 score: 75.4243
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 112..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G000410.1	CmoCh13G000410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane