CmoCh13G000150 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTAGCAGTGGGCGCGCTCTTCAGAGTCCGGCGAAACCCGAAACCTCGCGTTCATCTTCATTCTCATTTCCGAGCGCCGGAAAACTTTGAGGTCAATTTTTTAGAGCATCAGCGCTGCCTCTAAGCACCACCTCTGCAATCGAAATCCTTCTCCTACCCTATCTCTTGTTTCAAATTACTCAGCTAAGACCACCAAATCCACCGTTAAGAAGGGCAAGTCCAAGGCCGACGCTAAAGCCGCCGATGATCCCTCCGCCTCCGCTGCTGCTTCAGACGAATTAGATGCGGCGCTTTCTGATGATGATCCCTCATTCGATGTTGGCACATATGGTCGCCCTCTCTTTACCTCCGCATCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGCAATTATTTCTAATTCAAGTACGTATCTGAAGTCGTTTGGATCGCTAACTCATGTTTTTATTATTTTATTTTTGGTCTTTTTAACTCTCGAACCTTGTATGTGCATCAGATTTAGACATGTAGTTTATTGGTATATTTCCTAATTCTATTGACAAAAGTTAAATCTCTCTAACCATGTTTGGAATCTTAACAAGGGAAACGGTCTCTCATGATCATGATTGCTTAGGGTTGCTGGCTGGTTAATGTTTTATGCCAAGTGTTTACTGTCTTGTGATAAGCTTTCAGGAGATCATGTGAGGACTGTGGATAATATGAAACAGTGACCCATTCACTTTACATTGTCCTCTTTGAGCTCTCCCTTTTCAATCGCGTTTATTAGGGAGAGATTTCCACACCCTTATAAAGAATAGTTCGTTCCCCTCTCCAACTGATGTCAATTGCTATGGCTAAGTCAAATTTCTGAACCTATACCGTTGACAGAGGGCATTGGCGTTGGGATGGTGAAAGGGGCTGATTGCATGAGGATGCCTGTGGGTTCAACTGTATATATGACTTAATTGATACTGGAATCAAGCACACTCATGCGGCTGTTGGGGTGGTTGTTCGTTTAAGAAAAGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAAGTGAGGCACAAATCTAAATCTACCCTTTTTTTGATTTCTAATAGTAAGTTTCTTGGATGAATTAAATCTTCCAAAATTAATTTTAATCGCAATAATAATTGTTACTTCTTGTACAGAATGACAACTGGTTTACGTTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCTACTCCGCCAATACGTTGCTAG TTAGCAGTGGGCGCGCTCTTCAGAGTCCGGCGAAACCCGAAACCTCGCGTTCATCTTCATTCTCATTTCCGAGCGCCGGAAAACTTTGAGGTCAATTTTTTAGAGCATCAGCGCTGCCTCTAAGCACCACCTCTGCAATCGAAATCCTTCTCCTACCCTATCTCTTGTTTCAAATTACTCAGCTAAGACCACCAAATCCACCGTTAAGAAGGGCAAGTCCAAGGCCGACGCTAAAGCCGCCGATGATCCCTCCGCCTCCGCTGCTGCTTCAGACGAATTAGATGCGGCGCTTTCTGATGATGATCCCTCATTCGATGTTGGCACATATGGTCGCCCTCTCTTTACCTCCGCATCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGCAATTATTTCTAATTCAAAGGGCATTGGCGTTGGGATGGTGAAAGGGGCTGATTGCATGAGGATGCCTGTGGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAAAATGACAACTGGTTTACGTTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCTACTCCGCCAATACGTTGCTAG ATGCGGCGCTTTCTGATGATGATCCCTCATTCGATGTTGGCACATATGGTCGCCCTCTCTTTACCTCCGCATCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGCAATTATTTCTAATTCAAAGGGCATTGGCGTTGGGATGGTGAAAGGGGCTGATTGCATGAGGATGCCTGTGGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAAAATGACAACTGGTTTACGTTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCTACTCCGCCAATACGTTGCTAG MRRFLMMIPHSMLAHMVALSLPPHLHSHSSLARMQAIISNSKGIGVGMVKGADCMRMPVELSLVKDIPVLIAIDQNDNWFTFSEYEEPVTVRSTPPIRC Homology
BLAST of CmoCh13G000150 vs. ExPASy TrEMBL
Match: A0A5A7UZA8 (28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00370 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 8.0e-14 Identity = 48/83 (57.83%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of CmoCh13G000150 vs. ExPASy TrEMBL
Match: A0A1S3C6G8 (28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 8.0e-14 Identity = 48/83 (57.83%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of CmoCh13G000150 vs. ExPASy TrEMBL
Match: A0A0A0LVC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533720 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.3e-13 Identity = 48/83 (57.83%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of CmoCh13G000150 vs. ExPASy TrEMBL
Match: A0A0A0KG66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310480 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.3e-13 Identity = 48/83 (57.83%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of CmoCh13G000150 vs. ExPASy TrEMBL
Match: A0A2I0VVM1 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca020378 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12 Identity = 46/87 (52.87%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of CmoCh13G000150 vs. NCBI nr
Match: KAG6583329.1 (hypothetical protein SDJN03_19261, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162.9 bits (411), Expect = 1.4e-36 Identity = 80/84 (95.24%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of CmoCh13G000150 vs. NCBI nr
Match: XP_008457304.1 (PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo] >KAA0059987.1 28S ribosomal protein S29 [Cucumis melo var. makuwa] >TYJ97246.1 28S ribosomal protein S29 [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13 Identity = 48/83 (57.83%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of CmoCh13G000150 vs. NCBI nr
Match: XP_011657272.1 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KGN47392.1 hypothetical protein Csa_023053 [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 4.8e-13 Identity = 48/83 (57.83%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of CmoCh13G000150 vs. NCBI nr
Match: XP_004145300.3 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KAE8653293.1 hypothetical protein Csa_023268 [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 4.8e-13 Identity = 48/83 (57.83%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of CmoCh13G000150 vs. NCBI nr
Match: XP_038895729.1 (28S ribosomal protein S29, mitochondrial [Benincasa hispida]) HSP 1 Score: 84.3 bits (207), Expect = 6.3e-13 Identity = 47/83 (56.63%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of CmoCh13G000150 vs. TAIR 10
Match: AT1G16870.1 (mitochondrial 28S ribosomal protein S29-related ) HSP 1 Score: 67.8 bits (164), Expect = 5.7e-12 Identity = 38/83 (45.78%), Postives = 46/83 (55.42%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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