CmoCh12G013600 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G013600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ATP-dependent DNA helicase
Location	Cmo_Chr12: 11690946 .. 11694224 (-)
RNA-Seq Expression	CmoCh12G013600
Synteny	CmoCh12G013600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATGATTAAAATGATTAAAATTGATTAAAATTGAATAAAAGAGTTTCGGAAGGTTTACCTCCGCGCTCCCTCTTAATGCCTCATCTTCGTAAACCGACGCCGGGAATAAGGTGAATATTCAGGCGGGAACGAAATGAAGAAGTCATCGCTTCCATTGCGCGGTAGTATCGGCCCCGGAAATCATGAGTATAGCAACGAATCCTTGGTGAAGCTCTTAAGGTGGCATTTCGGACATTCTGAGTTTAGAGGAAAGCAATTGGAAACGATTAAAGCTGTTTTATCAGGTTGATACTTCCATAGCTCACAGATGTAACATGTTGCGCGTTCTTAATTGTTGGTGAATTTTCTGAACACTGTTAGCTGATTTCGTTTATCGTCTTCTTTGACTTAGGAAAAGATTGTTTCTGTCTCATGCCCACTGGGGGAGGAAAGTCAGTGTGTTATCAGATCCCTGCTCTCGCTACAAAGGGAATCGTGCTTGTTGTTTGTCCCTTAATAGGTGAATGCTATTCAGTTTCTTTATTTACACTAAAAGCTTATAGGAGAATTTGAACTACAAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTGTATAAGATAATTGCGTCCCTGTCTGCCTAAATCATCAAGTATTCACTTGCAGCGTTGATGGTGAGCATTCAAGTGTTTGTTTCCTTGTTGTATTCCTAACAATTTCATTTTTCGATTTGTAATTGTTTGGCCCTTTCCCCACCCATTACATTAGGAAAACCAAGTGATGGCGTTGAAGGAAAAAGGGATTTCGGCTGAATATCTATCCTCAACTCAGTCAATACAAGACAAAAAAAAAGTGAATTTCCCCTACAGTTCTCTCCCTTCCTACTTATAATGTCTGTTTTGGTGGATTCCTCATTATTCATCAAAAGTATATATGTATATCCTGTATGTGTAGTTGGTATCATCACTCTTTCTAAATAATAACGGAATTAATTGAACTCACATGCACGAGGAAATGTAAACTTACTTTTAGATGACAACATCAGCTTGCCATTTTTCCACCTTTGGGGGGGAGGAAGCAAGGTAACATCATGTTTTTGTAAACATTCGGTGATGGGATATTTTGAATTTAACAAATCCTTCAACTGTATGCATCTCAGTAGTTTGTGAGAAGAGAAGAACTATTGCGTACTCAGGAGTGGTGGGAGTGAGTTTGGGAATCCCCCTTTTCTTTCATGTAATAGACAAAACCATAAAATGTCTTTGTTTCCCTTCTTTTTTGGGAATCTCCTGTCCTTGTTTATAAGCTCGTCCTCTCATCTTTCTCTGTTTATACAAACTTTACTTACCTAGAAATAATGTATGTAACAATCTTCTTCATCTAGATCCATGAAGATCTTGATTCTGGTAAACCTGCCTTAAGGCTTCTCTACGTTACACCTGAATTAATTGCAACACCAGGATTTATGGCAAAACTGATGAAAATTTATTCTCGAGGATTGCTAAGTCTGATTGCTATAGACGAGGTGAGTTTATATTGTATTATGTGCAGAATGTTGTATTCTTCAATCATTCCTTCATCTTTCTATTTAATGCAATTTTCAGGCACATTGTATTTCAACGTGGGGCCATGACTTCAGGTTTGTAATATAGATGATAGATAATCAGTTATTGTCTTTTAGGAATAGACTGTAGACATTAATCTCTTCTTATATTAGTATATACCATTATTTATGTTGACAAAAGCTATTGATAATGATCCTCTTTGCCTCTACCTCATATGTCAATACGATGCTCATCCTAGTTGTACCATAAGTCAATCTTGTTGCTTATGGATGACCTTTGTTTTTTCTTTTCTGTCTCCTCTCTGGCCTTTTATGTTTTGAAACAGGCCTGGCTACCGCAAGCTTTCTTCTTTGAGGAGTCGTCTTCCTAATGTTCCTATACTTGCCTTGACAGCTACTGCTGCTCCTAAGTGAGTTATTCTTATAACCATTTAGTTTAGAAATTCTTTGTTCCCATTTTAGTGTGTCTTTTTATGTGGGAACCATACACTTGGTTTATGCAAACCAACCTTTTTGTTAACTTATTATGGTTGTTAGTTTAGTATTAAACTATAGGCCTATCTTTTGCTTCTTGGGGTGATTCTATTGCCCTTTGCGTGTTCATACGATAGACTCCAGGTCTCTTTTCCTTTAGAAAAAAATTGACGTATGTTTCTCTGCTGATATTCTATGATTTTGTTGGATGGTAGCAGTCAGTGCATGTAGGTACTGAATTTAAAGTTCAGCAAGATTAAATCCTGGTTTTTTCTTTATATCTGCAGGGTCCAGAAGGATGTGATAGCATCCTTGGGCTTGCAAAACCCTCTAGTTCTTATGTCTTCATTTAATCGTCCGAATATATATTACGAAGGTTTGTCCTGGTGGCTTAACTTTAAGTGTGTGTGTTTTCAATTTTTTCCGTGCAGCATGGGAAAATTGGGATGAACTGATTGATTGCCCCCTGTTCCATATGTTTTTCTGCATGTAGTATGTTTCATGAGTTACATGTAAGTTCATGTTGCCTAGAATTTGTAAATTTACTGCTGCATTTGAACCTAGTTGAAAATTGATTGTGCAGTTCGATATAAAGATCTTTTGGATGATCCACTTGCCGATTTGTCTAAGCAGCTGAAAGCTAGTGGAGATGTCTGTGGAATCATCTATTGCCTAGAACGTGCATTGTGTGACCAATTGTCAGTTTATCTAGGAAAATATGGTATTTCATGCGCTGGTACGTAAATTTTTTATACTCTTTGGAATTGGAATTTTAGCTCTTCGAGTTTTATTTGTTTAGATATATACTTATATTGTGTTGGTCTTGTCGGTTTTCAGCTTATCATGCAGGTTTAAAGAATGAGTTGAGGAAGTCTGTTTTGGAGGATTGGTTAAGCTCTAAGATACAAGTTGTTGTAGCCACAGTAGCTTTTGGGTATAGTTGTCTATAA

mRNA sequence

GAAATGATTAAAATGATTAAAATTGATTAAAATTGAATAAAAGAGTTTCGGAAGGTTTACCTCCGCGCTCCCTCTTAATGCCTCATCTTCGTAAACCGACGCCGGGAATAAGGTGAATATTCAGGCGGGAACGAAATGAAGAAGTCATCGCTTCCATTGCGCGGTAGTATCGGCCCCGGAAATCATGAGTATAGCAACGAATCCTTGGTGAAGCTCTTAAGGTGGCATTTCGGACATTCTGAGTTTAGAGGAAAGCAATTGGAAACGATTAAAGCTGTTTTATCAGGAAAAGATTGTTTCTGTCTCATGCCCACTGGGGGAGGAAAGTCAGTGTGTTATCAGATCCCTGCTCTCGCTACAAAGGGAATCGTGCTTGTTGTTTGTCCCTTAATAGATAATTGCGTCCCTGTCTGCCTAAATCATCAAGTATTCACTTGCAGCGTTGATGGTGAGCATTCAAGTGAAAACCAAGTGATGGCGTTGAAGGAAAAAGGGATTTCGGCTGAATATCTATCCTCAACTCAGTCAATACAAGACAAAAAAAAAATCCATGAAGATCTTGATTCTGGTAAACCTGCCTTAAGGCTTCTCTACGTTACACCTGAATTAATTGCAACACCAGGATTTATGGCAAAACTGATGAAAATTTATTCTCGAGGATTGCTAAGTCTGATTGCTATAGACGAGGCACATTGTATTTCAACGTGGGGCCATGACTTCAGGCCTGGCTACCGCAAGCTTTCTTCTTTGAGGAGTCGTCTTCCTAATGTTCCTATACTTGCCTTGACAGCTACTGCTGCTCCTAAGGTCCAGAAGGATGTGATAGCATCCTTGGGCTTGCAAAACCCTCTAGTTCTTATGTCTTCATTTAATCGTCCGAATATATATTACGAAGTTCGATATAAAGATCTTTTGGATGATCCACTTGCCGATTTGTCTAAGCAGCTGAAAGCTAGTGGAGATGTCTGTGGAATCATCTATTGCCTAGAACGTGCATTGTGTGACCAATTGTCAGTTTATCTAGGAAAATATGGTATTTCATGCGCTGCTTATCATGCAGGTTTAAAGAATGAGTTGAGGAAGTCTGTTTTGGAGGATTGGTTAAGCTCTAAGATACAAGTTGTTGTAGCCACAGTAGCTTTTGGGTATAGTTGTCTATAA

Coding sequence (CDS)

ATGAAGAAGTCATCGCTTCCATTGCGCGGTAGTATCGGCCCCGGAAATCATGAGTATAGCAACGAATCCTTGGTGAAGCTCTTAAGGTGGCATTTCGGACATTCTGAGTTTAGAGGAAAGCAATTGGAAACGATTAAAGCTGTTTTATCAGGAAAAGATTGTTTCTGTCTCATGCCCACTGGGGGAGGAAAGTCAGTGTGTTATCAGATCCCTGCTCTCGCTACAAAGGGAATCGTGCTTGTTGTTTGTCCCTTAATAGATAATTGCGTCCCTGTCTGCCTAAATCATCAAGTATTCACTTGCAGCGTTGATGGTGAGCATTCAAGTGAAAACCAAGTGATGGCGTTGAAGGAAAAAGGGATTTCGGCTGAATATCTATCCTCAACTCAGTCAATACAAGACAAAAAAAAAATCCATGAAGATCTTGATTCTGGTAAACCTGCCTTAAGGCTTCTCTACGTTACACCTGAATTAATTGCAACACCAGGATTTATGGCAAAACTGATGAAAATTTATTCTCGAGGATTGCTAAGTCTGATTGCTATAGACGAGGCACATTGTATTTCAACGTGGGGCCATGACTTCAGGCCTGGCTACCGCAAGCTTTCTTCTTTGAGGAGTCGTCTTCCTAATGTTCCTATACTTGCCTTGACAGCTACTGCTGCTCCTAAGGTCCAGAAGGATGTGATAGCATCCTTGGGCTTGCAAAACCCTCTAGTTCTTATGTCTTCATTTAATCGTCCGAATATATATTACGAAGTTCGATATAAAGATCTTTTGGATGATCCACTTGCCGATTTGTCTAAGCAGCTGAAAGCTAGTGGAGATGTCTGTGGAATCATCTATTGCCTAGAACGTGCATTGTGTGACCAATTGTCAGTTTATCTAGGAAAATATGGTATTTCATGCGCTGCTTATCATGCAGGTTTAAAGAATGAGTTGAGGAAGTCTGTTTTGGAGGATTGGTTAAGCTCTAAGATACAAGTTGTTGTAGCCACAGTAGCTTTTGGGTATAGTTGTCTATAA

Protein sequence

MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPTGGGKSVCYQIPALATKGIVLVVCPLIDNCVPVCLNHQVFTCSVDGEHSSENQVMALKEKGISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLIAIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLVLMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYGISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFGYSCL

Homology

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BLAST of CmoCh12G013600 vs. ExPASy Swiss-Prot
Match: Q9FT72 (ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE=1 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 9.4e-128
Identity = 230/337 (68.25%), Postives = 266/337 (78.93%), Query Frame = 0


Query: 1   MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT 60
           MKKS LP++       +    E+LVKLLRWHFGH++FRGKQLE I+AV+SG+DCFCLMPT
Sbjct: 1   MKKSPLPVQNVQSSDKNVAGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPT 60

Query: 61  GGGKSVCYQIPALATKGIVLVVCPLIDNCVPVCLNHQVFTCSVDGEHSSENQVMALKEKG 120
           GGGKS+CYQIPALA  GIVLVV PLI                       ENQVMALKEKG
Sbjct: 61  GGGKSICYQIPALAKPGIVLVVSPLI--------------------ALMENQVMALKEKG 120

Query: 121 ISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLI 180
           I+AEYLSSTQ+   K KIHEDLDSGKP++RLLYVTPELIAT GFM KL K++SRGLL+LI
Sbjct: 121 IAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLI 180

Query: 181 AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV 240
           AIDEAHCIS+WGHDFRP YR+LS+LR  L +VP+LALTATAAPKVQKDVI SL L+NPLV
Sbjct: 181 AIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNPLV 240

Query: 241 LMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYG 300
           L SSFNRPNI+YEVRYKDLLD+   DL   LK+ G++C IIYCLER  CD LSV+L   G
Sbjct: 241 LKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIG 300

Query: 301 ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 338
           IS AAYHAGL +++R +VL+DWLSSK Q++VATVAFG
Sbjct: 301 ISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFG 317

[Close]

BLAST of CmoCh12G013600 vs. ExPASy Swiss-Prot
Match: Q9VGI8 (Bloom syndrome protein homolog OS=Drosophila melanogaster OX=7227 GN=Blm PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.3e-65
Identity = 137/312 (43.91%), Postives = 187/312 (59.94%), Query Frame = 0


Query: 28   LRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPTGGGKSVCYQIPALATKGIVLVVCPLID 87
            L + FG   FR  QL+ I A L G DCF LMPTGGGKS+CYQ+PA+ T+G+ +V+ P   
Sbjct: 729  LSYSFGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISP--- 788

Query: 88   NCVPVCLNHQVFTCSVDGEHSSENQVMALKEKGISAEYLSSTQSIQDKKKIHEDLDSGKP 147
                  L   +F           +Q+  L    I A+ LS  Q + D   I+ DL+S  P
Sbjct: 789  ------LKSLIF-----------DQINKLASLDICAKSLSGEQKMADVMAIYRDLESQPP 848

Query: 148  ALRLLYVTPELIATPG-FMAKLMKIYSRGLLSLIAIDEAHCISTWGHDFRPGYRKLSSLR 207
             ++LLYVTPE I++   F   L  + S   +S   IDEAHC+S WGHDFRP Y+KL  L+
Sbjct: 849  MVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLK 908

Query: 208  SRLPNVPILALTATAAPKVQKDVIASLGLQNPLVLMSSFNRPNIYYEVRYKDLLDDPLAD 267
             R PNVP +ALTATA P+V+ D++A L L+N    +SSFNR N+ Y V  K  +   L D
Sbjct: 909  KRFPNVPTIALTATATPRVRLDILAQLNLKNCKWFLSSFNRSNLRYRVLPKKGV-STLDD 968

Query: 268  LSKQLKASGD-VCGIIYCLERALCDQLSVYLGKYGISCAAYHAGLKNELRKSVLEDWLSS 327
            +S+ +++      GIIYCL R  CD+ S  + K G+   +YHAGL +  R+S  +DWL+ 
Sbjct: 969  ISRYIRSKPQHFSGIIYCLSRKECDETSKKMCKDGVRAVSYHAGLTDTDRESRQKDWLTG 1019

Query: 328  KIQVVVATVAFG 338
            K++V+ ATVAFG
Sbjct: 1029 KMRVICATVAFG 1019

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BLAST of CmoCh12G013600 vs. ExPASy Swiss-Prot
Match: D4ACP5 (ATP-dependent DNA helicase Q5 OS=Rattus norvegicus OX=10116 GN=Recql5 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.5e-64
Identity = 140/343 (40.82%), Postives = 200/343 (58.31%), Query Frame = 0


Query: 11  SIGPGNHEYSNESLVK-LLRWHFGHSEFRGK-QLETIKAVLSG-KDCFCLMPTGGGKSVC 70
           S  P +  +  E  V+  L+  FG   F+   Q   I AV+ G KD F  MPTG GKS+C
Sbjct: 2   SARPFSTPFDRERRVRSTLKKVFGFDSFKTPLQESAIMAVVKGDKDVFVCMPTGAGKSLC 61

Query: 71  YQIPALATKGIVLVVCPLIDNCVPVCLNHQVFTCSVDGEHSSENQVMALKEKGISAEYLS 130
           YQ+PA+  KGI +VV PLI       +  QV            + ++ALK   +    L+
Sbjct: 62  YQLPAVLAKGITIVVSPLI-----ALIQDQV------------DHLLALK---VQVSSLN 121

Query: 131 STQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLIAIDEAHC 190
           S  S+Q++K++  DL+  KP  +LLY+TPE+ A+  F   L  + SR LLS + +DEAHC
Sbjct: 122 SKLSVQERKELLSDLERDKPRTKLLYITPEMAASASFQPTLNSLLSRNLLSYLVVDEAHC 181

Query: 191 ISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLVLMSSFNR 250
           +S WGHDFRP Y +L +LRSRL + P +ALTATA P+VQ+DV A+L L+ P   ++SF  
Sbjct: 182 VSQWGHDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDVFAALHLKQP---VASFKT 241

Query: 251 P----NIYYEVRYKDLLDDPLADL---------SKQLKASGDVCGIIYCLERALCDQLSV 310
           P    N++Y+V++K+L+ D   +L          K    S   CGI+YC  R  C+QL++
Sbjct: 242 PCFRANLFYDVQFKELIPDVYGNLRDFCLKALGQKADNGSSSGCGIVYCRTREACEQLAI 301

Query: 311 YLGKYGISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 338
            L   G++  AYHAGLK   R  V  +W+  K+ V+VAT++FG
Sbjct: 302 ELSSRGVNAKAYHAGLKASERTQVQNEWMEEKVPVIVATISFG 321

[Close]

BLAST of CmoCh12G013600 vs. ExPASy Swiss-Prot
Match: O94762 (ATP-dependent DNA helicase Q5 OS=Homo sapiens OX=9606 GN=RECQL5 PE=1 SV=2)

HSP 1 Score: 245.0 bits (624), Expect = 1.3e-63
Identity = 133/317 (41.96%), Postives = 190/317 (59.94%), Query Frame = 0


Query: 32  FGHSEFRG--KQLETIKAVLSGKDCFCLMPTGGGKSVCYQIPALATKGIVLVVCPLIDNC 91
           FG   F+   ++  T+  V   KD F  MPTG GKS+CYQ+PAL  KGI +VV PLI   
Sbjct: 24  FGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLI--- 83

Query: 92  VPVCLNHQVFTCSVDGEHSSENQVMALKEKGISAEYLSSTQSIQDKKKIHEDLDSGKPAL 151
               +  QV            + ++ LK   +    L+S  S Q++K++  DL+  KP  
Sbjct: 84  --ALIQDQV------------DHLLTLK---VRVSSLNSKLSAQERKELLADLEREKPQT 143

Query: 152 RLLYVTPELIATPGFMAKLMKIYSRGLLSLIAIDEAHCISTWGHDFRPGYRKLSSLRSRL 211
           ++LY+TPE+ A+  F   L  + SR LLS + +DEAHC+S WGHDFRP Y +L +LRSRL
Sbjct: 144 KILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRL 203

Query: 212 PNVPILALTATAAPKVQKDVIASLGLQNPLVLMSS-FNRPNIYYEVRYKDLLDDPLADLS 271
            + P +ALTATA P+VQ+DV A+L L+ P+ +  +   R N++Y+V++K+L+ DP  +L 
Sbjct: 204 GHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDVQFKELISDPYGNLK 263

Query: 272 K-QLKASGDV-------CGIIYCLERALCDQLSVYLGKYGISCAAYHAGLKNELRKSVLE 331
              LKA G         CGI+YC  R  C+QL++ L   G++  AYHAGLK   R  V  
Sbjct: 264 DFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKASERTLVQN 320

Query: 332 DWLSSKIQVVVATVAFG 338
           DW+  K+ V+VAT++FG
Sbjct: 324 DWMEEKVPVIVATISFG 320

[Close]

BLAST of CmoCh12G013600 vs. ExPASy Swiss-Prot
Match: Q8VID5 (ATP-dependent DNA helicase Q5 OS=Mus musculus OX=10090 GN=Recql5 PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.6e-63
Identity = 136/343 (39.65%), Postives = 198/343 (57.73%), Query Frame = 0


Query: 11  SIGPGNHEYSNESLVK-LLRWHFGHSEFRG--KQLETIKAVLSGKDCFCLMPTGGGKSVC 70
           S  P +  +  E  V+  L+  FG   F+   ++  T+  V   +D F  MPTG GKS+C
Sbjct: 2   SARPFSTPFDRERRVRSTLKKVFGFDSFKTPLQESATMAVVKGAEDVFVCMPTGAGKSLC 61

Query: 71  YQIPALATKGIVLVVCPLIDNCVPVCLNHQVFTCSVDGEHSSENQVMALKEKGISAEYLS 130
           YQ+PAL   GI +VV PLI       +  QV            + ++ALK   +    L+
Sbjct: 62  YQLPALLASGITIVVSPLI-----ALIQDQV------------DHLLALK---VQVSSLN 121

Query: 131 STQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLIAIDEAHC 190
           S  S+Q++K++  DL+  KP  +LLY+TPE+ A+  F   L  + SR LLS + +DEAHC
Sbjct: 122 SKLSVQERKELLSDLERDKPRTKLLYITPEMAASASFQPTLNSLVSRNLLSYLVVDEAHC 181

Query: 191 ISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLVLMSSFNR 250
           +S WGHDFRP Y +L +LRSRL + P +ALTATA P+VQ+DV A+L L+ P   ++SF  
Sbjct: 182 VSQWGHDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDVFAALHLKQP---VASFKT 241

Query: 251 P----NIYYEVRYKDLLDDPLADL---------SKQLKASGDVCGIIYCLERALCDQLSV 310
           P    N++Y+V++K+L+ D   +L          K    S   CGI+YC  R  C+QL++
Sbjct: 242 PCFRANLFYDVQFKELIPDVYGNLRDFCLKALGQKAENGSSSGCGIVYCRTREACEQLAI 301

Query: 311 YLGKYGISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 338
            L   G++  AYHAGLK   R  V  +W+  K+ V+VAT++FG
Sbjct: 302 ELSSRGVNAKAYHAGLKASDRTQVQNEWMEEKVPVIVATISFG 321

[Close]

BLAST of CmoCh12G013600 vs. ExPASy TrEMBL
Match: A0A6J1FC10 (ATP-dependent DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111444040 PE=3 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 5.8e-173
Identity = 314/337 (93.18%), Postives = 314/337 (93.18%), Query Frame = 0


Query: 1   MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT 60
           MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT
Sbjct: 1   MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT 60

Query: 61  GGGKSVCYQIPALATKGIVLVVCPLIDNCVPVCLNHQVFTCSVDGEHSSENQVMALKEKG 120
           GGGKSVCYQIPALATKGIVLVVCPLI                       ENQVMALKEKG
Sbjct: 61  GGGKSVCYQIPALATKGIVLVVCPLI--------------------ALMENQVMALKEKG 120

Query: 121 ISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLI 180
           ISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLI
Sbjct: 121 ISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLI 180

Query: 181 AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV 240
           AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV
Sbjct: 181 AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV 240

Query: 241 LMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYG 300
           LMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYG
Sbjct: 241 LMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYG 300

Query: 301 ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 338
           ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG
Sbjct: 301 ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 317

[Close]

BLAST of CmoCh12G013600 vs. ExPASy TrEMBL
Match: A0A6J1FGR4 (ATP-dependent DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111444040 PE=3 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 5.8e-173
Identity = 314/337 (93.18%), Postives = 314/337 (93.18%), Query Frame = 0


Query: 1   MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT 60
           MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT
Sbjct: 1   MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT 60

Query: 61  GGGKSVCYQIPALATKGIVLVVCPLIDNCVPVCLNHQVFTCSVDGEHSSENQVMALKEKG 120
           GGGKSVCYQIPALATKGIVLVVCPLI                       ENQVMALKEKG
Sbjct: 61  GGGKSVCYQIPALATKGIVLVVCPLI--------------------ALMENQVMALKEKG 120

Query: 121 ISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLI 180
           ISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLI
Sbjct: 121 ISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLI 180

Query: 181 AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV 240
           AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV
Sbjct: 181 AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV 240

Query: 241 LMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYG 300
           LMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYG
Sbjct: 241 LMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYG 300

Query: 301 ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 338
           ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG
Sbjct: 301 ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 317

[Close]

BLAST of CmoCh12G013600 vs. ExPASy TrEMBL
Match: A0A6J1HSL2 (ATP-dependent DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111465781 PE=3 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 1.9e-171
Identity = 311/337 (92.28%), Postives = 312/337 (92.58%), Query Frame = 0


Query: 1   MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT 60
           MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT
Sbjct: 1   MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT 60

Query: 61  GGGKSVCYQIPALATKGIVLVVCPLIDNCVPVCLNHQVFTCSVDGEHSSENQVMALKEKG 120
           GGGKSVCYQIPALATKGIVLVVCPLI                       ENQVMALKEKG
Sbjct: 61  GGGKSVCYQIPALATKGIVLVVCPLI--------------------ALMENQVMALKEKG 120

Query: 121 ISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLI 180
           ISAEYLSSTQSIQDKKKIHEDLDSGKP LRLLYVTPELIATPGFMAKLMKIYSRGLLSLI
Sbjct: 121 ISAEYLSSTQSIQDKKKIHEDLDSGKPTLRLLYVTPELIATPGFMAKLMKIYSRGLLSLI 180

Query: 181 AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV 240
           AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV
Sbjct: 181 AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV 240

Query: 241 LMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYG 300
           LMSSFNRPNIYYEVRYKDLLDDPLADL+KQLKASGDVCGIIYCLERALCDQLSVYL KYG
Sbjct: 241 LMSSFNRPNIYYEVRYKDLLDDPLADLAKQLKASGDVCGIIYCLERALCDQLSVYLAKYG 300

Query: 301 ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 338
           ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG
Sbjct: 301 ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 317

[Close]

BLAST of CmoCh12G013600 vs. ExPASy TrEMBL
Match: A0A5A7V2G7 (ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00190 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 8.5e-156
Identity = 282/339 (83.19%), Postives = 295/339 (87.02%), Query Frame = 0


Query: 1   MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT 60
           MKKSSLPL+ +I P  H+YS ESL KLLRWHFGHSEFRGKQLETI+AVLSGKDCFCLMPT
Sbjct: 1   MKKSSLPLQSNIRPEKHKYSKESLTKLLRWHFGHSEFRGKQLETIEAVLSGKDCFCLMPT 60

Query: 61  GGGKSVCYQIPALATKGIVLVVCPLIDNCVPVCLNHQVFTCSVDGEHSSENQVMALKEKG 120
           GGGKSVCYQIPALA+ G VLVVCPLI                  GE  SENQVMALKEKG
Sbjct: 61  GGGKSVCYQIPALASNGTVLVVCPLI------------------GEWYSENQVMALKEKG 120

Query: 121 ISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLI 180
           ISAEYLSSTQS Q K KIHEDLDS KP LRLLYVTPELIAT GFMAKLMKIYSRGLL+LI
Sbjct: 121 ISAEYLSSTQSTQAKNKIHEDLDSSKPTLRLLYVTPELIATSGFMAKLMKIYSRGLLNLI 180

Query: 181 AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV 240
           AIDEAHCISTWGHDFRP YRKLSSLRSRLPN+PILALTATA PKVQKDVI SL L+NPLV
Sbjct: 181 AIDEAHCISTWGHDFRPSYRKLSSLRSRLPNIPILALTATAVPKVQKDVIISLALENPLV 240

Query: 241 LMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYG 300
           L SSFNRPNIYYEVRYKDLLDDP ADL  QLK+SGDVC IIYCLERA+CDQLSVYL K+G
Sbjct: 241 LKSSFNRPNIYYEVRYKDLLDDPFADLCNQLKSSGDVCAIIYCLERAMCDQLSVYLAKHG 300

Query: 301 ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFGYS 340
           ISCAAYHAGLKNELRKSVLEDW+SSKIQVVVATVAFGY+
Sbjct: 301 ISCAAYHAGLKNELRKSVLEDWISSKIQVVVATVAFGYN 321

[Close]

BLAST of CmoCh12G013600 vs. ExPASy TrEMBL
Match: A0A1S3CBQ2 (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 6.7e-153
Identity = 278/337 (82.49%), Postives = 291/337 (86.35%), Query Frame = 0


Query: 1   MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT 60
           MKKSSLPL+ +I P  H+YS ESL KLLRWHFGHSEFRGKQLETI+AVLSGKDCFCLMPT
Sbjct: 1   MKKSSLPLQSNIRPEKHKYSKESLTKLLRWHFGHSEFRGKQLETIEAVLSGKDCFCLMPT 60

Query: 61  GGGKSVCYQIPALATKGIVLVVCPLIDNCVPVCLNHQVFTCSVDGEHSSENQVMALKEKG 120
           GGGKSVCYQIPALA+ G+VLVVCPLI                       ENQVMALKEKG
Sbjct: 61  GGGKSVCYQIPALASNGMVLVVCPLI--------------------ALMENQVMALKEKG 120

Query: 121 ISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLI 180
           ISAEYLSSTQS Q K KIHEDLDS KP LRLLYVTPELIAT GFMAKLMKIYSRGLL+LI
Sbjct: 121 ISAEYLSSTQSTQAKNKIHEDLDSSKPTLRLLYVTPELIATSGFMAKLMKIYSRGLLNLI 180

Query: 181 AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV 240
           AIDEAHCISTWGHDFRP YRKLSSLRSRLPN+PILALTATA PKVQKDVI SL L+NPLV
Sbjct: 181 AIDEAHCISTWGHDFRPSYRKLSSLRSRLPNIPILALTATAVPKVQKDVIISLALENPLV 240

Query: 241 LMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYG 300
           L SSFNRPNIYYEVRYKDLLDDP ADL  QLK+SGDVC IIYCLERA+CDQLSVYL K+G
Sbjct: 241 LKSSFNRPNIYYEVRYKDLLDDPFADLCNQLKSSGDVCAIIYCLERAMCDQLSVYLAKHG 300

Query: 301 ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 338
           ISCAAYHAGLKNELRKSVLEDW+SSKIQVVVATVAFG
Sbjct: 301 ISCAAYHAGLKNELRKSVLEDWISSKIQVVVATVAFG 317

[Close]

BLAST of CmoCh12G013600 vs. TAIR 10
Match: AT4G35740.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 458.0 bits (1177), Expect = 6.7e-129
Identity = 230/337 (68.25%), Postives = 266/337 (78.93%), Query Frame = 0


Query: 1   MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT 60
           MKKS LP++       +    E+LVKLLRWHFGH++FRGKQLE I+AV+SG+DCFCLMPT
Sbjct: 1   MKKSPLPVQNVQSSDKNVAGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPT 60

Query: 61  GGGKSVCYQIPALATKGIVLVVCPLIDNCVPVCLNHQVFTCSVDGEHSSENQVMALKEKG 120
           GGGKS+CYQIPALA  GIVLVV PLI                       ENQVMALKEKG
Sbjct: 61  GGGKSICYQIPALAKPGIVLVVSPLI--------------------ALMENQVMALKEKG 120

Query: 121 ISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLI 180
           I+AEYLSSTQ+   K KIHEDLDSGKP++RLLYVTPELIAT GFM KL K++SRGLL+LI
Sbjct: 121 IAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLI 180

Query: 181 AIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLV 240
           AIDEAHCIS+WGHDFRP YR+LS+LR  L +VP+LALTATAAPKVQKDVI SL L+NPLV
Sbjct: 181 AIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNPLV 240

Query: 241 LMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYG 300
           L SSFNRPNI+YEVRYKDLLD+   DL   LK+ G++C IIYCLER  CD LSV+L   G
Sbjct: 241 LKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIG 300

Query: 301 ISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 338
           IS AAYHAGL +++R +VL+DWLSSK Q++VATVAFG
Sbjct: 301 ISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFG 317

[Close]

BLAST of CmoCh12G013600 vs. TAIR 10
Match: AT4G35740.2 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 340.5 bits (872), Expect = 1.6e-93
Identity = 166/224 (74.11%), Postives = 192/224 (85.71%), Query Frame = 0


Query: 114 MALKEKGISAEYLSSTQSIQDKKKIHEDLDSGKPALRLLYVTPELIATPGFMAKLMKIYS 173
           MALKEKGI+AEYLSSTQ+   K KIHEDLDSGKP++RLLYVTPELIAT GFM KL K++S
Sbjct: 1   MALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHS 60

Query: 174 RGLLSLIAIDEAHCISTWGHDFRPGYRKLSSLRSRLPNVPILALTATAAPKVQKDVIASL 233
           RGLL+LIAIDEAHCIS+WGHDFRP YR+LS+LR  L +VP+LALTATAAPKVQKDVI SL
Sbjct: 61  RGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSL 120

Query: 234 GLQNPLVLMSSFNRPNIYYEVRYKDLLDDPLADLSKQLKASGDVCGIIYCLERALCDQLS 293
            L+NPLVL SSFNRPNI+YEVRYKDLLD+   DL   LK+ G++C IIYCLER  CD LS
Sbjct: 121 NLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLERTTCDDLS 180

Query: 294 VYLGKYGISCAAYHAGLKNELRKSVLEDWLSSKIQVVVATVAFG 338
           V+L   GIS AAYHAGL +++R +VL+DWLSSK Q++VATVAFG
Sbjct: 181 VHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFG 224

[Close]

BLAST of CmoCh12G013600 vs. TAIR 10
Match: AT1G31360.1 (RECQ helicase L2 )

HSP 1 Score: 241.9 bits (616), Expect = 7.5e-64
Identity = 131/311 (42.12%), Postives = 191/311 (61.41%), Query Frame = 0


Query: 32  FGHSEFRGKQLETIKAVLSGKDCFCLMPTGGGKSVCYQIPALATKGIVLVVCPLIDNCVP 91
           FG S++R  Q E I A+++G+D   +M  GGGKS+CYQ+PA+   G  LVV PL+     
Sbjct: 85  FGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAMLRGGTTLVVSPLLS---- 144

Query: 92  VCLNHQVFTCSVDGEHSSENQVMALKEKGISAEYLSSTQSIQDKKKIHEDLDSGKPALRL 151
                             ++QVM L   GISA  L+ST   +++K +++ L+ G+  L++
Sbjct: 145 ----------------LIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKI 204

Query: 152 LYVTPELIA-TPGFMAKLMKIYSRGLLSLIAIDEAHCISTWGHDFRPGYRKLSSLRSRLP 211
           LYVTPE ++ +  FM+KL K ++ G LSLI+IDEAHC S WGHDFRP Y+ LS L+++ P
Sbjct: 205 LYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFP 264

Query: 212 NVPILALTATAAPKVQKDVIASLGLQNPLVLMSSFNRPNIYYEVRYKD----LLDDPLAD 271
            VP++ALTATA  KVQ D+I  L +   +  +SS NRPN++Y VR K     L+ D +A+
Sbjct: 265 KVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAE 324

Query: 272 LSKQLKASGDVCGIIYCLERALCDQLSVYLGKYGISCAAYHAGLKNELRKSVLEDWLSSK 331
             ++   S +  GI+YC  R  C+Q++  L + GIS   YHA +   +R+ V   W  +K
Sbjct: 325 FIRE-SYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNK 374

Query: 332 IQVVVATVAFG 338
           +QV+V TVAFG
Sbjct: 385 LQVIVGTVAFG 374

[Close]

BLAST of CmoCh12G013600 vs. TAIR 10
Match: AT1G10930.1 (DNA helicase (RECQl4A) )

HSP 1 Score: 239.2 bits (609), Expect = 4.9e-63
Identity = 131/308 (42.53%), Postives = 180/308 (58.44%), Query Frame = 0


Query: 32  FGHSEFRGKQLETIKAVLSGKDCFCLMPTGGGKSVCYQIPALATKGIVLVVCPLIDNCVP 91
           FG+  FR  Q E I A +SG D F LMPTGGGKS+ YQ+PAL   GI LV+ PL+     
Sbjct: 449 FGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICGGITLVISPLVS---- 508

Query: 92  VCLNHQVFTCSVDGEHSSENQVMALKEKGISAEYLSSTQSIQDKKKIHEDLDSGKPALRL 151
                             ++Q+M L +  I A  LS+     ++ KI ++L+S     +L
Sbjct: 509 ----------------LIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKL 568

Query: 152 LYVTPELIA-TPGFMAKLMKIYSRGLLSLIAIDEAHCISTWGHDFRPGYRKLSSLRSRLP 211
           LYVTPE +A +   +  L  + SRGLL+   IDEAHC+S WGHDFRP Y+ L  L+ + P
Sbjct: 569 LYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFP 628

Query: 212 NVPILALTATAAPKVQKDVIASLGLQNPLVLMSSFNRPNIYYEVRYKDLLDDPLADLSKQ 271
           N+P+LALTATA   V++DV+ +LGL N +V   SFNRPN++Y V  K      L D+ K 
Sbjct: 629 NIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPK--TKKCLEDIDKF 688

Query: 272 LKASG-DVCGIIYCLERALCDQLSVYLGKYGISCAAYHAGLKNELRKSVLEDWLSSKIQV 331
           +K +  D CGIIYCL R  C+++S  L ++G   A YH  ++ E R  +   W   +I +
Sbjct: 689 IKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINI 734

Query: 332 VVATVAFG 338
           + ATVAFG
Sbjct: 749 ICATVAFG 734

[Close]

BLAST of CmoCh12G013600 vs. TAIR 10
Match: AT1G60930.1 (RECQ helicase L4B )

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-60
Identity = 129/308 (41.88%), Postives = 180/308 (58.44%), Query Frame = 0


Query: 32  FGHSEFRGKQLETIKAVLSGKDCFCLMPTGGGKSVCYQIPALATKGIVLVVCPLIDNCVP 91
           FG+  FR  Q E I A +SG D F LMPTGGGKS+ YQ+PAL   GI LV+ PL+     
Sbjct: 465 FGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALLCAGITLVISPLVS---- 524

Query: 92  VCLNHQVFTCSVDGEHSSENQVMALKEKGISAEYLSSTQSIQDKKKIHEDLDSGKPALRL 151
                             ++Q+M L +  ISA  LS+     ++ +I ++L S K   +L
Sbjct: 525 ----------------LIQDQIMNLLQTNISAASLSAGMEWAEQLEILQELSSEKSKYKL 584

Query: 152 LYVTPELIATPGFMAKLMKIY-SRGLLSLIAIDEAHCISTWGHDFRPGYRKLSSLRSRLP 211
           LYVTPE +A    + + ++I  SR LL+   IDEAHC+S WGHDFRP Y+ L  L+ + P
Sbjct: 585 LYVTPEKVAKSESLLRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFP 644

Query: 212 NVPILALTATAAPKVQKDVIASLGLQNPLVLMSSFNRPNIYYEVRYKDLLDDPLADLSKQ 271
           N+P+LALTATA   V++DV+ +LGL N +V   SFNRPN++Y V  K   +  L D+ K 
Sbjct: 645 NIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPK--TNKCLEDIDKF 704

Query: 272 LKASG-DVCGIIYCLERALCDQLSVYLGKYGISCAAYHAGLKNELRKSVLEDWLSSKIQV 331
           ++ +  D CGIIYCL R  C++++  L  +G   A YH  +    R  V + W   +I +
Sbjct: 705 IRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINI 750

Query: 332 VVATVAFG 338
           + ATVAFG
Sbjct: 765 ICATVAFG 750

The following BLAST results are available for this feature:

BLAST of CmoCh12G013600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FT72	9.4e-128	68.25	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE...	[more]
Q9VGI8	2.3e-65	43.91	Bloom syndrome protein homolog OS=Drosophila melanogaster OX=7227 GN=Blm PE=1 SV...	[more]
D4ACP5	2.5e-64	40.82	ATP-dependent DNA helicase Q5 OS=Rattus norvegicus OX=10116 GN=Recql5 PE=1 SV=1	[more]
O94762	1.3e-63	41.96	ATP-dependent DNA helicase Q5 OS=Homo sapiens OX=9606 GN=RECQL5 PE=1 SV=2	[more]
Q8VID5	1.6e-63	39.65	ATP-dependent DNA helicase Q5 OS=Mus musculus OX=10090 GN=Recql5 PE=1 SV=1	[more]

BLAST of CmoCh12G013600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FC10	5.8e-173	93.18	ATP-dependent DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111444040 PE=3 SV...	[more]
A0A6J1FGR4	5.8e-173	93.18	ATP-dependent DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111444040 PE=3 SV...	[more]
A0A6J1HSL2	1.9e-171	92.28	ATP-dependent DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111465781 PE=3 SV=1	[more]
A0A5A7V2G7	8.5e-156	83.19	ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3CBQ2	6.7e-153	82.49	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1	[more]

BLAST of CmoCh12G013600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35740.1	6.7e-129	68.25	DEAD/DEAH box RNA helicase family protein	[more]
AT4G35740.2	1.6e-93	74.11	DEAD/DEAH box RNA helicase family protein	[more]
AT1G31360.1	7.5e-64	42.12	RECQ helicase L2	[more]
AT1G10930.1	4.9e-63	42.53	DNA helicase (RECQl4A)	[more]
AT1G60930.1	2.3e-60	41.88	RECQ helicase L4B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 33..255 e-value: 4.5E-24 score: 96.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 45..239 score: 19.51264
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 247..338 e-value: 2.2E-21 score: 78.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 13..246 e-value: 6.1E-81 score: 272.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 21..237
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 245..338
IPR004589	DNA helicase, ATP-dependent, RecQ type	TIGRFAM	TIGR00614	TIGR00614	coord: 27..338 e-value: 8.1E-101 score: 336.1
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 41..227 e-value: 2.7E-13 score: 50.0
None	No IPR available	PANTHER	PTHR13710:SF134	ATP-DEPENDENT DNA HELICASE Q-LIKE 3	coord: 3..338
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 3..338
None	No IPR available	CDD	cd17920	DEXHc_RecQ	coord: 26..246 e-value: 2.61725E-99 score: 289.82
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 259..341 score: 9.069882

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G013600.1	CmoCh12G013600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006268	DNA unwinding involved in DNA replication
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006310	DNA recombination
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043138	3'-5' DNA helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0009378	four-way junction helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004386	helicase activity