CmoCh12G013300 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G013300
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	tetraspanin-2-like
Location	Cmo_Chr12: 11582641 .. 11585757 (-)
RNA-Seq Expression	CmoCh12G013300
Synteny	CmoCh12G013300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCACACGGAATGAAACTTGATGAAGCCACAACATCTCTGTACGACGTGTCGTTTCTCCCTCAGTCCTTTTCCTTTACAACTCTTGACGGCACGACCATTAGCTCATTCTTCCTTCCCCATTGGCCATTCAAATTGAGAGAAAAACCCGATGGGTGTAAGCAACAAGATCACAGCAATTGTGAATTTCTTGGCTCTCCTCTGCTCCATTCCTATAATCGGCGCTGGAATTTGGCTGGCTTCCAAGCCCGACAACGGATGCATCCATTTTTTCCGGTGGCCGGTGGTTCTCCTTGGCGTTTTAATCCTCCTCGTCTCCTTAGCCGGATTCATTGGTGCCTACTGGAACAGACAAGGGTTATTAGCCTTTTACCTCTTCTGTATGGCTCTTCTAATCGGCCTCTTGCTCGTCCTTCTCGTCTTCACCTTCGTCGTCACTCGCCCCAACGGCAGCTACTCCGTCATGGGCCGCGGATTCAAAGAGTACCGGCTCGACGGATTCTCGTCCTGGCTCAGGAATCATCTCACTAATTCTCGAAATTGGCCAAAGATAAGAACGTGCTTGGCTGAATCTAATACTTGTCCTAAGCTTAACCAGCTGTACGTCGCCGCCGATCAGTTCTTCGCGGCGGACATCTCGCCGCTTCAGGTCAGTTCCTTAATTCCAGGCTTGAATTTAGATTTTTTTTTAATATTTAATTTCTTGGAATATGCTCCATACGCCTCTGCTTTGATTTTGATTGGCTTTTCAGACCGCAATCCTGCTCGGTGAGTCGGTTGTTTAAAAATCAAATAATAATAATAATAATAATAAAAATAAAATAAAATAGCTTTAAAATTGTTTCTGGTTAAAAAAAAAATTAAAATAATATTTTGGTTTTTTTTTTAGGTTTATGGTTACTTTGTGCTTTTAAAAAATTCAGTTTTATAAGTTCTTTTGTCCTCAGACTTTTCACCATTAGTTTATTTTTAAAATTAATTAAAAAAAAAAAAAAGACTTTCTTGCTTTTCACTTTATAAAATTTAGAAATATATTTCATCTTTATGACGTATAATTTACTATTTAACAAATTTGGATAAAAAAATATTATTTGAAAAGACTAATTTTAAAGTTTAAGTCGTTTTTTTAAATTTATTTTTAAATATGGTGGTTCTCATTTCACATCAGATCCTAGAAACCTTGGTGGTCCGTATTGCAATGTTTTTTGGAATTTTTATTTTTTTTCGTGGTTTTGGATATATAAATATTTATTTTTTTTCTTAAAAGAAAATAAAAGGTAACCCATCTCTATCTCTTCCATCAGCAGGAGCATGTGACTTGTTGATGTTGGGTGTCCCAAGTCCCAACGACTTTTGGAGTCTAAAAGTCTCATGTATTTAATGATGATTTTTTTATTAAATATTTTTCTTTAAACTATAGTTTCATTTGGAAATTTTACCATACCATTCACTATTTTTTAACATTTGATTTGAAAGTTACCTTAATATAAATATATATATTATATATTGATTTTGTAATGTAAAGGGTAAATAAAGGGTGTCAATTTCTTTTTTTTTAATCAACGTTGAGGAATATTGATATAAAGCGCTTTTTGGCAAATAAAAATATATTCCATAGCCTTTAGAAAATTTCAGGGATGTTTTTTATCCTATTGGGATAGAAGTATTCTTCACTTTTACGGTTCAAGTCGGTATTTACTGAGCAAGAATTTGGAATCATTTTCTTTTTCATTTCCTTGTGTTCACTCCATTCGATCTTACTTGTAAACTCCCGAGTGATCCCCTATACCAATAAGGTGCATTTTTTTTCTTTCGGTGAATCAATCATTTTCTCGAAGCAATTCTATATTGAGTGATCCCTTAAAAAGTGTATAGATTTGTAGGGAGAATAATCTTCACTTTTGAAAGCAAGAAGTAAGTAATGTGATCATGTCGGAGGTACGAGGTGTCCGAGTTCTTACCTCCTTCTAAGGCCATTGTCAAAATGGGGCCTAGACATAATACACATTGGGTAGGCACTTTTGGTGGTTGAGGTTGTGACCAACCGTAGACTCACTAGGACAAAGCAGGGGCCCAAGTTTATGTAAATTTTGGGGAAAGGTAATTTTAGGGTGGCTAATAAAATCTCAAACAATCACCTAAATGACAGCTCAGATTTCATAACCCAACAATAAAGTAGACAGCTCAGATCTTATTGGGGGTCCATTTTGATTCCAAACCTGTTCATATAGCTCTAAATTGGTTGATATGGCTGCCAGCTAATCAGTCCATTATGAGCATTCGAGTCTTGGAAGGAACTTAAAAGCTTACGTCTTGGTTTTTACTGCCGTGAACAGTCAGGATGCTGTAAACCTCCAACGGCTTGTGGTTATAACTTCGTGAACCCAACACTGTGGCTGAACCCTGGTAATCCTATGGCTGACCCTGACTGCTATGTTTGGAGCAATGACCAGACCCAGCTGTGCTACAATTGCAACTCTTGCAAGGCTGGTCTCTTGGGGAATCTCAGGATGGAATGGAGGAAAGCCAATGTGGTTCTTATTGTCACTGTGGTTGTCCTGATTTGGGTCTATGTAATCGGCTGCAGCGCCTTCAAGAACGCTCAGACCGAGGACCTCTTTCGTCGATACAAACAGGGTTGGATCTAATCTTGTTTGTTTGTATGAATCAGACGTCTTCGCCTTTGTATATTCCTTTGTTCTTTTCATATCTAGAAATCCTGAGTTTGTAGAGTTGGAAGACAGTAGAACAAAGTTCTCGAATCAGTTCTTTAAATGTTTATTAGTTTACTTTGCTTTGGATATTTGAGTTTCAACATCTTCTTATGCAGAAGGTTCATAAACATGTCAAGGGAGACAAGCTATTAGAACATGAACGATCATCAGCCAATTACCAAACAGAAACGCACTTACATTAAGAACTAATCACGAGCTGTCCGTTAAAGAAAATAAGCATTTTTCTTTGTGCTAAGAATCACGGATCTCCACGATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGGTTTGCTTTGGGTTTCCCCAAAAGGTCACGTACCAATGGAGGTGTATTCCTTATTTATAAACCTCTGATCATTCCCTAAAGTAGCCAATAT

mRNA sequence

TTCACACGGAATGAAACTTGATGAAGCCACAACATCTCTGTACGACGTGTCGTTTCTCCCTCAGTCCTTTTCCTTTACAACTCTTGACGGCACGACCATTAGCTCATTCTTCCTTCCCCATTGGCCATTCAAATTGAGAGAAAAACCCGATGGGTGTAAGCAACAAGATCACAGCAATTGTGAATTTCTTGGCTCTCCTCTGCTCCATTCCTATAATCGGCGCTGGAATTTGGCTGGCTTCCAAGCCCGACAACGGATGCATCCATTTTTTCCGGTGGCCGGTGGTTCTCCTTGGCGTTTTAATCCTCCTCGTCTCCTTAGCCGGATTCATTGGTGCCTACTGGAACAGACAAGGGTTATTAGCCTTTTACCTCTTCTGTATGGCTCTTCTAATCGGCCTCTTGCTCGTCCTTCTCGTCTTCACCTTCGTCGTCACTCGCCCCAACGGCAGCTACTCCGTCATGGGCCGCGGATTCAAAGAGTACCGGCTCGACGGATTCTCGTCCTGGCTCAGGAATCATCTCACTAATTCTCGAAATTGGCCAAAGATAAGAACGTGCTTGGCTGAATCTAATACTTGTCCTAAGCTTAACCAGCTGTACGTCGCCGCCGATCAGTTCTTCGCGGCGGACATCTCGCCGCTTCAGTCAGGATGCTGTAAACCTCCAACGGCTTGTGGTTATAACTTCGTGAACCCAACACTGTGGCTGAACCCTGGTAATCCTATGGCTGACCCTGACTGCTATGTTTGGAGCAATGACCAGACCCAGCTGTGCTACAATTGCAACTCTTGCAAGGCTGGTCTCTTGGGGAATCTCAGGATGGAATGGAGGAAAGCCAATGTGGTTCTTATTGTCACTGTGGTTGTCCTGATTTGGGTCTATGTAATCGGCTGCAGCGCCTTCAAGAACGCTCAGACCGAGGACCTCTTTCGTCGATACAAACAGGGTTGGATCTAATCTTGTTTGTTTGTATGAATCAGACGTCTTCGCCTTTGTATATTCCTTTGTTCTTTTCATATCTAGAAATCCTGAGTTTGTAGAGTTGGAAGACAGTAGAACAAAGTTCTCGAATCAGTTCTTTAAATGTTTATTAGTTTACTTTGCTTTGGATATTTGAGTTTCAACATCTTCTTATGCAGAAGGTTCATAAACATGTCAAGGGAGACAAGCTATTAGAACATGAACGATCATCAGCCAATTACCAAACAGAAACGCACTTACATTAAGAACTAATCACGAGCTGTCCGTTAAAGAAAATAAGCATTTTTCTTTGTGCTAAGAATCACGGATCTCCACGATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGGTTTGCTTTGGGTTTCCCCAAAAGGTCACGTACCAATGGAGGTGTATTCCTTATTTATAAACCTCTGATCATTCCCTAAAGTAGCCAATAT

Coding sequence (CDS)

ATGGGTGTAAGCAACAAGATCACAGCAATTGTGAATTTCTTGGCTCTCCTCTGCTCCATTCCTATAATCGGCGCTGGAATTTGGCTGGCTTCCAAGCCCGACAACGGATGCATCCATTTTTTCCGGTGGCCGGTGGTTCTCCTTGGCGTTTTAATCCTCCTCGTCTCCTTAGCCGGATTCATTGGTGCCTACTGGAACAGACAAGGGTTATTAGCCTTTTACCTCTTCTGTATGGCTCTTCTAATCGGCCTCTTGCTCGTCCTTCTCGTCTTCACCTTCGTCGTCACTCGCCCCAACGGCAGCTACTCCGTCATGGGCCGCGGATTCAAAGAGTACCGGCTCGACGGATTCTCGTCCTGGCTCAGGAATCATCTCACTAATTCTCGAAATTGGCCAAAGATAAGAACGTGCTTGGCTGAATCTAATACTTGTCCTAAGCTTAACCAGCTGTACGTCGCCGCCGATCAGTTCTTCGCGGCGGACATCTCGCCGCTTCAGTCAGGATGCTGTAAACCTCCAACGGCTTGTGGTTATAACTTCGTGAACCCAACACTGTGGCTGAACCCTGGTAATCCTATGGCTGACCCTGACTGCTATGTTTGGAGCAATGACCAGACCCAGCTGTGCTACAATTGCAACTCTTGCAAGGCTGGTCTCTTGGGGAATCTCAGGATGGAATGGAGGAAAGCCAATGTGGTTCTTATTGTCACTGTGGTTGTCCTGATTTGGGTCTATGTAATCGGCTGCAGCGCCTTCAAGAACGCTCAGACCGAGGACCTCTTTCGTCGATACAAACAGGGTTGGATCTAA

Protein sequence

MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGFIGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSWLRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNFVNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVVLIWVYVIGCSAFKNAQTEDLFRRYKQGWI

Homology

[Close]

BLAST of CmoCh12G013300 vs. ExPASy Swiss-Prot
Match: Q9ZUN5 (Tetraspanin-2 OS=Arabidopsis thaliana OX=3702 GN=TET2 PE=2 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 3.3e-120
Identity = 197/270 (72.96%), Postives = 237/270 (87.78%), Query Frame = 0


Query: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           M ++N +TAI+N LALLCSIPI  +GIWLASKPDN C++  RWPVV+LGVLIL+VS  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW 120
           IGAY  ++ LLA YL CMA+LIGLLLV+L+F FVVTRP+GSY V GRG+KEYRL+GFS+W
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAAD-ISPLQSGCCKPPTACGYN 180
           L+ ++ +S+NW ++R CLA++N CPKLNQ ++ ADQFF++  I+PLQSGCCKPPTACGYN
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 181 FVNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVV 240
           FVNPTLWLNP N  AD DCY+WSNDQ+QLCYNCNSCKAGLLGNLR EWRKAN++LI+TVV
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query: 241 VLIWVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           VLIWVYVI CSAF+NAQTEDLFR+YKQGW+
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQGWV 270

[Close]

BLAST of CmoCh12G013300 vs. ExPASy Swiss-Prot
Match: Q9FIQ5 (Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.8e-82
Identity = 140/268 (52.24%), Postives = 185/268 (69.03%), Query Frame = 0


Query: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           M +SN +   +NF+ +L SIP+IGAGIWLA    N C+   +WPV++LGVLILLV LAGF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW 120
           IG +W    LL  YL  M +LI LL  L+ F ++VT     +    R + EY L  FS W
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF 180
           LR  +  S  W +IRTCL+ +  CP+LNQ Y  A  FF A + P+QSGCCKPPT CG+ F
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTF 180

Query: 181 VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 240
           VNPT W++P +  AD DC  WSNDQ  LCY C+SCKAGLL N++++W KA++ L++ ++ 
Sbjct: 181 VNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIG 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGW 269
           LI VY+IGC AF+NA+TED+FR+YKQG+
Sbjct: 241 LIIVYIIGCCAFRNAETEDIFRKYKQGY 268

[Close]

BLAST of CmoCh12G013300 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.9e-63
Identity = 113/265 (42.64%), Postives = 175/265 (66.04%), Query Frame = 0


Query: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDN-GCIHFFRWPVVLLGVLILLVSLAG 60
           M  SN +  +VNFL  L SIPI+G GIWL+S+ ++  C+ F +WP++++G+ I++VSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FIGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSS 120
           F GA +  + L+  YL  M L+I  L+  ++F + VT      +V+ RG+ +Y L+ +S 
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLRNHLTNSRNWPKIRTCLAESNTCPKL----NQLYVAADQFFAADISPLQSGCCKPPTA 180
           WL++ +++   W KI +CL +S  C K+    N +   AD FF   +SP++SGCCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGYNFVNPTLWLNPGNPMA-DPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVL 240
           CG+++VN T W   G  +  + DC VWSNDQ+ LCY C+SCKAG+LG+L+  WRK +V+ 
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVTVVVLIWVYVIGCSAFKNAQTED 260
           IV +++L+  YVI  +A++N +  D
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRID 265

[Close]

BLAST of CmoCh12G013300 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.9e-62
Identity = 117/263 (44.49%), Postives = 163/263 (61.98%), Query Frame = 0


Query: 4   SNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGFIGA 63
           SN +  I+NFL  L SIPI+  GIWL+ K    C  F   PV+ LGV +++V++AG IG+
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query: 64  YWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSWLRN 123
                 LL  YLF M LLI L+  + VF FVVT      ++ G+G+KEY+L  +S+WL+ 
Sbjct: 65  CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124

Query: 124 HLTNSRNWPKIRTCLAESNTCPKLNQLY--VAADQFFAADISPLQSGCCKPPTACGYNFV 183
            + N +NW KIR+CL ES  C KL   +  V  + F+   ++ LQSGCCKP   CG+ +V
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYV 184

Query: 184 NPTLWL-NPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 243
           NPT W  N      +PDC  W N + +LC++C SCKAGLL N++  W+K  +V IV +V 
Sbjct: 185 NPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVF 244

Query: 244 LIWVYVIGCSAFKNAQTEDLFRR 264
           LI VY +GC AF+N + +D + R
Sbjct: 245 LIIVYSVGCCAFRNNKRDDSYSR 267

[Close]

BLAST of CmoCh12G013300 vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 6.0e-61
Identity = 108/259 (41.70%), Postives = 171/259 (66.02%), Query Frame = 0


Query: 5   NKITAIVNFLALLCSIPIIGAGIWLASKPDN-GCIHFFRWPVVLLGVLILLVSLAGFIGA 64
           + +  ++NF   L SIPI+G GIWL+S+ ++  C+ F +WP++++G+ I+++SLAG  GA
Sbjct: 5   SNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGA 64

Query: 65  YWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSWLRN 124
            +  + L+  YLF M  +I  L+   +F +VVT       VM R + +Y L+ +S WL++
Sbjct: 65  CYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKD 124

Query: 125 HLTNSRNWPKIRTCLAESNTCPK----LNQLYVAADQFFAADISPLQSGCCKPPTACGYN 184
            +T++  W  I +C+ +S  C K    LN +   A  F+  ++SP++SGCCKPPT CGY 
Sbjct: 125 RVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYT 184

Query: 185 FVNPTLWLNPGNPMA--DPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVT 244
           +VN T+W+ PG  M   +PDC +W+NDQ  LCY C+SCKAG+LG+L+  WRK +V+ IV 
Sbjct: 185 YVNETVWI-PGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVV 244

Query: 245 VVVLIWVYVIGCSAFKNAQ 257
           V++L+  YVI C+A++N +
Sbjct: 245 VIILVIFYVIACAAYQNVK 262

[Close]

BLAST of CmoCh12G013300 vs. ExPASy TrEMBL
Match: A0A6J1FGY8 (tetraspanin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111444073 PE=3 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 3.5e-157
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW 120

Query: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF 180
           LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF
Sbjct: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 240
           VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of CmoCh12G013300 vs. ExPASy TrEMBL
Match: A0A6J1HQ04 (tetraspanin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111465635 PE=3 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 7.9e-157
Identity = 268/269 (99.63%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNG+YSVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGTYSVMGRGFKEYRLDGFSSW 120

Query: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF 180
           LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF
Sbjct: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 240
           VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of CmoCh12G013300 vs. ExPASy TrEMBL
Match: A0A0A0LFR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000510 PE=3 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-147
Identity = 251/269 (93.31%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MG+SN ITAI+NFLALLCSIPIIGAGIWLASKPDN CIHFFRWPVVL+GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRP+GSY+VMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF 180
           L++HLTNSRNWPKIRTCLAES+ CPKLNQ Y AADQFFAADISPLQSGCCKPPTACG+NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 240
           VNPTLWLNP +PMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLR EWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of CmoCh12G013300 vs. ExPASy TrEMBL
Match: A0A5A7V1S6 (Tetraspanin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00880 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 5.7e-147
Identity = 249/269 (92.57%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MG+SN ITAI+NFLALLCSIPIIGAGIWLASKPDN CIHFFRWPVV++GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVIIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMA+LIGLLLVLLVFTFVVTRP+GSY+VMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMAVLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF 180
           L++HLTNSRNWPKIRTCLAES+ CPKLNQ Y AADQFFAADISPLQSGCCKPPTACG+NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 240
           VNPTLWLNP +PMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLR EWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of CmoCh12G013300 vs. ExPASy TrEMBL
Match: A0A1S3CB14 (tetraspanin-2 OS=Cucumis melo OX=3656 GN=LOC103498461 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 5.7e-147
Identity = 249/269 (92.57%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MG+SN ITAI+NFLALLCSIPIIGAGIWLASKPDN CIHFFRWPVV++GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVIIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMA+LIGLLLVLLVFTFVVTRP+GSY+VMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMAVLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF 180
           L++HLTNSRNWPKIRTCLAES+ CPKLNQ Y AADQFFAADISPLQSGCCKPPTACG+NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 240
           VNPTLWLNP +PMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLR EWRKANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LIWVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of CmoCh12G013300 vs. TAIR 10
Match: AT2G19580.1 (tetraspanin2 )

HSP 1 Score: 432.6 bits (1111), Expect = 2.4e-121
Identity = 197/270 (72.96%), Postives = 237/270 (87.78%), Query Frame = 0


Query: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           M ++N +TAI+N LALLCSIPI  +GIWLASKPDN C++  RWPVV+LGVLIL+VS  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW 120
           IGAY  ++ LLA YL CMA+LIGLLLV+L+F FVVTRP+GSY V GRG+KEYRL+GFS+W
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAAD-ISPLQSGCCKPPTACGYN 180
           L+ ++ +S+NW ++R CLA++N CPKLNQ ++ ADQFF++  I+PLQSGCCKPPTACGYN
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 181 FVNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVV 240
           FVNPTLWLNP N  AD DCY+WSNDQ+QLCYNCNSCKAGLLGNLR EWRKAN++LI+TVV
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query: 241 VLIWVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           VLIWVYVI CSAF+NAQTEDLFR+YKQGW+
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQGWV 270

[Close]

BLAST of CmoCh12G013300 vs. TAIR 10
Match: AT5G46700.1 (Tetraspanin family protein )

HSP 1 Score: 306.6 bits (784), Expect = 2.0e-83
Identity = 140/268 (52.24%), Postives = 185/268 (69.03%), Query Frame = 0


Query: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           M +SN +   +NF+ +L SIP+IGAGIWLA    N C+   +WPV++LGVLILLV LAGF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSW 120
           IG +W    LL  YL  M +LI LL  L+ F ++VT     +    R + EY L  FS W
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 LRNHLTNSRNWPKIRTCLAESNTCPKLNQLYVAADQFFAADISPLQSGCCKPPTACGYNF 180
           LR  +  S  W +IRTCL+ +  CP+LNQ Y  A  FF A + P+QSGCCKPPT CG+ F
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTF 180

Query: 181 VNPTLWLNPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 240
           VNPT W++P +  AD DC  WSNDQ  LCY C+SCKAGLL N++++W KA++ L++ ++ 
Sbjct: 181 VNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIG 240

Query: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGW 269
           LI VY+IGC AF+NA+TED+FR+YKQG+
Sbjct: 241 LIIVYIIGCCAFRNAETEDIFRKYKQGY 268

[Close]

BLAST of CmoCh12G013300 vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 242.7 bits (618), Expect = 3.5e-64
Identity = 113/265 (42.64%), Postives = 175/265 (66.04%), Query Frame = 0


Query: 1   MGVSNKITAIVNFLALLCSIPIIGAGIWLASKPDN-GCIHFFRWPVVLLGVLILLVSLAG 60
           M  SN +  +VNFL  L SIPI+G GIWL+S+ ++  C+ F +WP++++G+ I++VSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FIGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSS 120
           F GA +  + L+  YL  M L+I  L+  ++F + VT      +V+ RG+ +Y L+ +S 
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLRNHLTNSRNWPKIRTCLAESNTCPKL----NQLYVAADQFFAADISPLQSGCCKPPTA 180
           WL++ +++   W KI +CL +S  C K+    N +   AD FF   +SP++SGCCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGYNFVNPTLWLNPGNPMA-DPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVL 240
           CG+++VN T W   G  +  + DC VWSNDQ+ LCY C+SCKAG+LG+L+  WRK +V+ 
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVTVVVLIWVYVIGCSAFKNAQTED 260
           IV +++L+  YVI  +A++N +  D
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRID 265

[Close]

BLAST of CmoCh12G013300 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-63
Identity = 117/263 (44.49%), Postives = 163/263 (61.98%), Query Frame = 0


Query: 4   SNKITAIVNFLALLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGFIGA 63
           SN +  I+NFL  L SIPI+  GIWL+ K    C  F   PV+ LGV +++V++AG IG+
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query: 64  YWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSWLRN 123
                 LL  YLF M LLI L+  + VF FVVT      ++ G+G+KEY+L  +S+WL+ 
Sbjct: 65  CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124

Query: 124 HLTNSRNWPKIRTCLAESNTCPKLNQLY--VAADQFFAADISPLQSGCCKPPTACGYNFV 183
            + N +NW KIR+CL ES  C KL   +  V  + F+   ++ LQSGCCKP   CG+ +V
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYV 184

Query: 184 NPTLWL-NPGNPMADPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVTVVV 243
           NPT W  N      +PDC  W N + +LC++C SCKAGLL N++  W+K  +V IV +V 
Sbjct: 185 NPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVF 244

Query: 244 LIWVYVIGCSAFKNAQTEDLFRR 264
           LI VY +GC AF+N + +D + R
Sbjct: 245 LIIVYSVGCCAFRNNKRDDSYSR 267

[Close]

BLAST of CmoCh12G013300 vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 )

HSP 1 Score: 235.7 bits (600), Expect = 4.3e-62
Identity = 108/259 (41.70%), Postives = 171/259 (66.02%), Query Frame = 0


Query: 5   NKITAIVNFLALLCSIPIIGAGIWLASKPDN-GCIHFFRWPVVLLGVLILLVSLAGFIGA 64
           + +  ++NF   L SIPI+G GIWL+S+ ++  C+ F +WP++++G+ I+++SLAG  GA
Sbjct: 5   SNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGA 64

Query: 65  YWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPNGSYSVMGRGFKEYRLDGFSSWLRN 124
            +  + L+  YLF M  +I  L+   +F +VVT       VM R + +Y L+ +S WL++
Sbjct: 65  CYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKD 124

Query: 125 HLTNSRNWPKIRTCLAESNTCPK----LNQLYVAADQFFAADISPLQSGCCKPPTACGYN 184
            +T++  W  I +C+ +S  C K    LN +   A  F+  ++SP++SGCCKPPT CGY 
Sbjct: 125 RVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYT 184

Query: 185 FVNPTLWLNPGNPMA--DPDCYVWSNDQTQLCYNCNSCKAGLLGNLRMEWRKANVVLIVT 244
           +VN T+W+ PG  M   +PDC +W+NDQ  LCY C+SCKAG+LG+L+  WRK +V+ IV 
Sbjct: 185 YVNETVWI-PGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVV 244

Query: 245 VVVLIWVYVIGCSAFKNAQ 257
           V++L+  YVI C+A++N +
Sbjct: 245 VIILVIFYVIACAAYQNVK 262

The following BLAST results are available for this feature:

BLAST of CmoCh12G013300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUN5	3.3e-120	72.96	Tetraspanin-2 OS=Arabidopsis thaliana OX=3702 GN=TET2 PE=2 SV=1	[more]
Q9FIQ5	2.8e-82	52.24	Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1	[more]
Q9M1E7	4.9e-63	42.64	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
Q8S8Q6	1.9e-62	44.49	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]
Q9LSS4	6.0e-61	41.70	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]

BLAST of CmoCh12G013300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGY8	3.5e-157	100.00	tetraspanin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111444073 PE=3 SV=1	[more]
A0A6J1HQ04	7.9e-157	99.63	tetraspanin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111465635 PE=3 SV=1	[more]
A0A0A0LFR6	1.5e-147	93.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000510 PE=3 SV=1	[more]
A0A5A7V1S6	5.7e-147	92.57	Tetraspanin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00880 ...	[more]
A0A1S3CB14	5.7e-147	92.57	tetraspanin-2 OS=Cucumis melo OX=3656 GN=LOC103498461 PE=3 SV=1	[more]

BLAST of CmoCh12G013300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19580.1	2.4e-121	72.96	tetraspanin2	[more]
AT5G46700.1	2.0e-83	52.24	Tetraspanin family protein	[more]
AT3G45600.1	3.5e-64	42.64	tetraspanin3	[more]
AT2G23810.1	1.3e-63	44.49	tetraspanin8	[more]
AT5G60220.1	4.3e-62	41.70	tetraspanin4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00259	TMFOUR	coord: 6..29 score: 25.27 coord: 38..64 score: 21.75 coord: 65..93 score: 16.29
None	No IPR available	PANTHER	PTHR32191:SF0	TETRASPANIN-2	coord: 1..266
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 6..250 e-value: 5.8E-29 score: 101.4
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 1..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G013300.1	CmoCh12G013300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0010305	leaf vascular tissue pattern formation
biological_process	GO:0009554	megasporogenesis
biological_process	GO:0009956	radial pattern formation
biological_process	GO:0009934	regulation of meristem structural organization
biological_process	GO:0010015	root morphogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma