CmoCh12G012910 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G012910
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein SPEAR1-like
Location	Cmo_Chr12: 11383485 .. 11385118 (+)
RNA-Seq Expression	CmoCh12G012910
Synteny	CmoCh12G012910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTAAAAAGAGGGCTTTAGAGATCTCAACCCTCCCACTTTCTCTCTCTAGTTTTTGATTTCTTTCTCTCTCTTCGTTTTATTGGAAGATAAATATGGGGAGTGGTTATTTTGGGGAGATGAATATGGGGAACATTGATAAGAGGAGGAGTTGGTCGCCGGCGGCTGCGGCGGCGGGGAGGAGAGGGAGGAAAGGAGGCGGCGGAGAGAAACCGAAGCAACCGCAAAGAGGGTTGGGAGTAGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGTTGCGCTGGTTATGGCCACTTCTATCCAACTCTCTCCGCCGTAAATCTCTCTCTCTCTCTCTCTGACTTTTTTTTCCTGTCTTTTACCTATCTCTCCGCCGTAAATTTCAATTCCTATAATTTTGGAGAGGAAATTTGAAGAGATCTTAAAAAAAATAAATTTAATTCAATTGAAGGGGTTTTCTTATTTCTCTATCTCTTTCTCTCTAAATTTAGACTAGAGATTTGAATTTCTGACTTTAAAAAACTTTAAAACTATGTTTATATCGACCGATTCAATGTGAATGAAATGAACGACATGCTTTAATTTCATATGATTATTGATTTTGAAATAAAAATCAAATTAATTATAAAAGTTTTAATTTTCTGTTTTTTCTTTTTTTAAATTATTTTTTAAAAAATTTTCCTTTAATAATGGATCCCAGGGAATGGGAGAATATGAAAGAGGAAGCTTTAGGTATGGGGATTCACAGCCAACAACAACTTCTATAAGGTAATTTATTTATTATTATTATTATTTTCTTTTTACGTTCGTAAATTTATGGAGTAAAATTTAGACATTTTATTTTATTTTCTATGAATTTTTAATTATAATAATAATTCTTATTATTTAATTTGTGGTTTGTGATGTTTTAGATGGAACATGAGTAATACAACCCTGGAGACCCAACATTTTGGGGAACCAAATATGACTGGACACCTTTCCAATCCTCGAGTACTGGTTAGTTACTGAGATTCATACCTATAACTTTTTTTATTGATGATAGATAATTAATTTGTAGAAATTGTTAAACCAGTTCAATGGTAATCGAAATGTATAAATGGATGAAAATATCAGAAATTTGAATACTAAATGTCTCGAAAGTTAGATTGACCTAATTACTGATTGCTCAATGATCGTCTGGTTGACACAAATTACCATATCGAGAGTCATTTATTGCAATTATTCTCAATTATGTTCGTATTTTTACATAAGAAGTGTGAAAAATGCAGGATTCAATGCACAAGAACATGAATACAAAATACGGGAGTGATTCAATTGGTTCAAGCAGTCAGAATTCTAAATCAAGTGAGACTCATGAGCTTGATTTGGAGCTAAGATTGTCGATCTAAATGGGTTTCTATCCCTGTAATTTTACCTATTTTATGAACCATGCCCTTCATCTTTCAATAATTGCTTCAAACACCCTCTTTTAGTTGTACATTTGCAAATCATAAAAGGGTATGGTTTGTTTGAGATTTATGAGACTATATGTTGTGAAAAGAATTCAAGGGCATGATTTGTAAATTGGGCAAACCATAGGGTGCAATTTGTAATTATCGTTCCTATATATATAAATATTGCATGCATGCAC

mRNA sequence

GCTTAAAAAGAGGGCTTTAGAGATCTCAACCCTCCCACTTTCTCTCTCTAGTTTTTGATTTCTTTCTCTCTCTTCGTTTTATTGGAAGATAAATATGGGGAGTGGTTATTTTGGGGAGATGAATATGGGGAACATTGATAAGAGGAGGAGTTGGTCGCCGGCGGCTGCGGCGGCGGGGAGGAGAGGGAGGAAAGGAGGCGGCGGAGAGAAACCGAAGCAACCGCAAAGAGGGTTGGGAGTAGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGTTGCGCTGGTTATGGCCACTTCTATCCAACTCTCTCCGCCGGAATGGGAGAATATGAAAGAGGAAGCTTTAGGTATGGGGATTCACAGCCAACAACAACTTCTATAAGATGGAACATGAGTAATACAACCCTGGAGACCCAACATTTTGGGGAACCAAATATGACTGGACACCTTTCCAATCCTCGAGTACTGGATTCAATGCACAAGAACATGAATACAAAATACGGGAGTGATTCAATTGGTTCAAGCAGTCAGAATTCTAAATCAAGTGAGACTCATGAGCTTGATTTGGAGCTAAGATTGTCGATCTAAATGGGTTTCTATCCCTGTAATTTTACCTATTTTATGAACCATGCCCTTCATCTTTCAATAATTGCTTCAAACACCCTCTTTTAGTTGTACATTTGCAAATCATAAAAGGGTATGGTTTGTTTGAGATTTATGAGACTATATGTTGTGAAAAGAATTCAAGGGCATGATTTGTAAATTGGGCAAACCATAGGGTGCAATTTGTAATTATCGTTCCTATATATATAAATATTGCATGCATGCAC

Coding sequence (CDS)

ATGGGGAGTGGTTATTTTGGGGAGATGAATATGGGGAACATTGATAAGAGGAGGAGTTGGTCGCCGGCGGCTGCGGCGGCGGGGAGGAGAGGGAGGAAAGGAGGCGGCGGAGAGAAACCGAAGCAACCGCAAAGAGGGTTGGGAGTAGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGTTGCGCTGGTTATGGCCACTTCTATCCAACTCTCTCCGCCGGAATGGGAGAATATGAAAGAGGAAGCTTTAGGTATGGGGATTCACAGCCAACAACAACTTCTATAAGATGGAACATGAGTAATACAACCCTGGAGACCCAACATTTTGGGGAACCAAATATGACTGGACACCTTTCCAATCCTCGAGTACTGGATTCAATGCACAAGAACATGAATACAAAATACGGGAGTGATTCAATTGGTTCAAGCAGTCAGAATTCTAAATCAAGTGAGACTCATGAGCTTGATTTGGAGCTAAGATTGTCGATCTAA

Protein sequence

MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

Homology

[Close]

BLAST of CmoCh12G012910 vs. ExPASy Swiss-Prot
Match: Q6IDB0 (Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 80/208 (38.46%), Postives = 101/208 (48.56%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGS +FG   MG        S +++ A +RG+   G +KPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSSFFGRPKMGGSSSSSPTSSSSSPA-KRGKNKNGSDKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGC-------------------------------------------AGYGHFYPT--LSA 120
             C                                           A YG F+P   ++A
Sbjct: 61  YNCNSFNTYPSYHPSTYQEDVRIQGGYPSIPSSSPSFSYASSSPPPAPYG-FHPNMMMNA 120

Query: 121 GMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNT 164
              +YER + RYGDSQP      WN S   LE+QHF EPN T H         +H++   
Sbjct: 121 NNDQYERTTIRYGDSQPHRAP-SWNPSYGILESQHFVEPNTTRHF--------LHEDQR- 180

[Close]

BLAST of CmoCh12G012910 vs. ExPASy Swiss-Prot
Match: Q84X40 (Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-20
Identity = 77/186 (41.40%), Postives = 95/186 (51.08%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNIDKRRS--WSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLH 60
           MGS +FG  N+       S   S +++ A RRG+K  G EKPKQPQRGLGVAQLEKIRLH
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKK-NGSEKPKQPQRGLGVAQLEKIRLH 60

Query: 61  GEMGCAGYGHFYPTL-------------------SAGMGEYERGSFRYGDSQPTTTSIRW 120
           GEM C  +  + P+L                   SA  G Y          Q    ++ W
Sbjct: 61  GEMSCNSFNSYNPSLYPQEDVRMQGGYSSIPSQSSAPYGFYPNMMMGVHRDQYDRATMSW 120

Query: 121 NMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDL 166
           N S   LE+QH  EPN+T H  N           +T   S S+GS  Q+S SSE  E+DL
Sbjct: 121 NPSYGILESQHSLEPNITRHFLN-------EDPSSTTRRSKSLGSGIQHSGSSENQEVDL 178

[Close]

BLAST of CmoCh12G012910 vs. ExPASy TrEMBL
Match: A0A6J1FCT6 (protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111444227 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.2e-88
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHL 120
           MGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHL
Sbjct: 61  MGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHL 120

Query: 121 SNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI 166
           SNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
Sbjct: 121 SNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI 165

[Close]

BLAST of CmoCh12G012910 vs. ExPASy TrEMBL
Match: A0A6J1HQB1 (protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111465705 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.4e-84
Identity = 160/165 (96.97%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGSGYFGEMNMGNIDKRRS SPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSGYFGEMNMGNIDKRRSGSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHL 120
           MGCAGYGHFYP LSAGMGEYERGSFRYGDSQPTTTSIRWNMSNT++ETQHFGEPNMTGHL
Sbjct: 61  MGCAGYGHFYPNLSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTSMETQHFGEPNMTGHL 120

Query: 121 SNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI 166
           SNPRVLDSMHKNMNTKYGSDSIGSSSQNS+SSETHELDLELRLSI
Sbjct: 121 SNPRVLDSMHKNMNTKYGSDSIGSSSQNSESSETHELDLELRLSI 165

[Close]

BLAST of CmoCh12G012910 vs. ExPASy TrEMBL
Match: A0A0A0LFV0 (SPOROCYTELESS-like EAR-containing protein 1 OS=Cucumis sativus OX=3659 GN=SPEAR1 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.3e-61
Identity = 141/204 (69.12%), Postives = 150/204 (73.53%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGSGYFGEMN  NI+KRRS SP +AA GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSGYFGEMN--NIEKRRSGSP-SAAGGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAGYGHFYPTLSA-------------------------------------GMGEYERG 120
           MGCA Y HFYP LSA                                     GMGEYERG
Sbjct: 61  MGCAAYSHFYPNLSAGDDRRMQTTTTPNFSYSSTHESSASSPNSYGFHQNFMGMGEYERG 120

Query: 121 SFRYGDSQPTTT-SIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSM-HKNMNTKYGSDS 166
           SFRYGDSQ TTT S+RW+ SNT LETQHFG+PNM+GHL NP V DSM HKN+NTKYGSDS
Sbjct: 121 SFRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNPHVQDSMIHKNINTKYGSDS 180

[Close]

BLAST of CmoCh12G012910 vs. ExPASy TrEMBL
Match: A0A1S3C7M3 (protein SPEAR1 OS=Cucumis melo OX=3656 GN=LOC103497912 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 140/203 (68.97%), Postives = 148/203 (72.91%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGSGYFGEMN  NI+KRRS SP AAA GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSGYFGEMN--NIEKRRSGSP-AAAGGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAGYGHFYPTLSA------------------------------------GMGEYERGS 120
           MGCA Y HFYP LSA                                    GMGEYERGS
Sbjct: 61  MGCAAYSHFYPNLSAGDDMRMQTTTPSNFSYSSTQSSSSSPNSYGFHQNFMGMGEYERGS 120

Query: 121 FRYGDSQPTTT-SIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDS-MHKNMNTKYGSDSI 166
           FRYGDSQ TTT S+RW+ SNT LETQHFG+PNM+GHL N  V DS +H NMNTKYGSDS+
Sbjct: 121 FRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNSHVQDSIIHNNMNTKYGSDSM 180

[Close]

BLAST of CmoCh12G012910 vs. ExPASy TrEMBL
Match: A0A6J1KB48 (protein SPEAR3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.5e-52
Identity = 128/190 (67.37%), Postives = 137/190 (72.11%), Query Frame = 0


Query: 1   MGSGYFGEMNMG--NIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLH 60
           MGSGYFGEMNMG  NIDKRRS S   AA  RRGRKGGGGEKPKQPQRGLGVAQLEKIRLH
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGS---AAVVRRGRKGGGGEKPKQPQRGLGVAQLEKIRLH 60

Query: 61  GEMGCAGYGHFYPTLSA-----------------------GMGEYERGSFRYGDSQPTTT 120
           GEMGCA YGH YP LSA                       GMGE+ERGS R GDSQP TT
Sbjct: 61  GEMGCAAYGHPYPYLSASDDMRIETASSSSPSYGFHQNFMGMGEHERGSLRCGDSQP-TT 120

Query: 121 SIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETH 166
           S+RW+ S+T LET HFG+PNMTGHL N  V DS+  N+N KYGSDS+  S QNS+SS   
Sbjct: 121 SLRWDPSHTFLETHHFGQPNMTGHLFNTHVQDSIQGNINVKYGSDSMRLSRQNSESS--- 180

[Close]

BLAST of CmoCh12G012910 vs. TAIR 10
Match: AT2G20080.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23
Identity = 75/167 (44.91%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNIDKRRS--WSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLH 60
           MGS +FG  N+       S   S +++ A RRG+K  G EKPKQPQRGLGVAQLEKIRLH
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKK-NGSEKPKQPQRGLGVAQLEKIRLH 60

Query: 61  GEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTG 120
           GEM C  +  + P+L   MG +          Q    ++ WN S   LE+QH  EPN+T 
Sbjct: 61  GEMSCNSFNSYNPSLYPQMGVHR--------DQYDRATMSWNPSYGILESQHSLEPNITR 120

Query: 121 HLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI 166
           H  N           +T   S S+GS  Q+S SSE  E+DLELRLS+
Sbjct: 121 HFLN-------EDPSSTTRRSKSLGSGIQHSGSSENQEVDLELRLSL 151

[Close]

BLAST of CmoCh12G012910 vs. TAIR 10
Match: AT4G28840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20080.1); Has 71 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 80/208 (38.46%), Postives = 101/208 (48.56%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGS +FG   MG        S +++ A +RG+   G +KPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSSFFGRPKMGGSSSSSPTSSSSSPA-KRGKNKNGSDKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGC-------------------------------------------AGYGHFYPT--LSA 120
             C                                           A YG F+P   ++A
Sbjct: 61  YNCNSFNTYPSYHPSTYQEDVRIQGGYPSIPSSSPSFSYASSSPPPAPYG-FHPNMMMNA 120

Query: 121 GMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNT 164
              +YER + RYGDSQP      WN S   LE+QHF EPN T H         +H++   
Sbjct: 121 NNDQYERTTIRYGDSQPHRAP-SWNPSYGILESQHFVEPNTTRHF--------LHEDQR- 180

[Close]

BLAST of CmoCh12G012910 vs. TAIR 10
Match: AT2G20080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-21
Identity = 77/186 (41.40%), Postives = 95/186 (51.08%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNIDKRRS--WSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLH 60
           MGS +FG  N+       S   S +++ A RRG+K  G EKPKQPQRGLGVAQLEKIRLH
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKK-NGSEKPKQPQRGLGVAQLEKIRLH 60

Query: 61  GEMGCAGYGHFYPTL-------------------SAGMGEYERGSFRYGDSQPTTTSIRW 120
           GEM C  +  + P+L                   SA  G Y          Q    ++ W
Sbjct: 61  GEMSCNSFNSYNPSLYPQEDVRMQGGYSSIPSQSSAPYGFYPNMMMGVHRDQYDRATMSW 120

Query: 121 NMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDL 166
           N S   LE+QH  EPN+T H  N           +T   S S+GS  Q+S SSE  E+DL
Sbjct: 121 NPSYGILESQHSLEPNITRHFLN-------EDPSSTTRRSKSLGSGIQHSGSSENQEVDL 178

The following BLAST results are available for this feature:

BLAST of CmoCh12G012910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IDB0	2.2e-21	38.46	Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1	[more]
Q84X40	1.8e-20	41.40	Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1	[more]

BLAST of CmoCh12G012910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCT6	8.2e-88	100.00	protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111444227 PE=4 SV=1	[more]
A0A6J1HQB1	1.4e-84	96.97	protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111465705 PE=4 SV=1	[more]
A0A0A0LFV0	1.3e-61	69.12	SPOROCYTELESS-like EAR-containing protein 1 OS=Cucumis sativus OX=3659 GN=SPEAR1...	[more]
A0A1S3C7M3	1.5e-60	68.97	protein SPEAR1 OS=Cucumis melo OX=3656 GN=LOC103497912 PE=4 SV=1	[more]
A0A6J1KB48	2.5e-52	67.37	protein SPEAR3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 ...	[more]

BLAST of CmoCh12G012910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20080.2	2.4e-23	44.91	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G28840.1	1.5e-22	38.46	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.1	1.3e-21	41.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..152
None	No IPR available	PANTHER	PTHR33388:SF18	PROTEIN SPEAR1	coord: 1..68
None	No IPR available	PANTHER	PTHR33388:SF18	PROTEIN SPEAR1	coord: 70..165
IPR040356	SPEAR family	PANTHER	PTHR33388	OS01G0212500 PROTEIN	coord: 1..68
IPR040356	SPEAR family	PANTHER	PTHR33388	OS01G0212500 PROTEIN	coord: 70..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G012910.1	CmoCh12G012910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity