CmoCh12G012260 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G012260
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	blue copper protein-like
Location	Cmo_Chr12: 10947391 .. 10948890 (-)
RNA-Seq Expression	CmoCh12G012260
Synteny	CmoCh12G012260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAAAGAGCTTAATCACAAGGGTGACCTGAGAACATCAAATCAAATCATGGCCGTAGGATTTAACCGGATGGTGGTTCTCCTCGTCGTGGTGGCAACTTTGTGGCGGTGCTCGTCCGCTGCCACCTACATGGTCGGTGACTCGTTGGGTTGGATCGACCCACCCAATGCTAATATTTATACTGATTGGGCTAGCAATAAGACTTTTGTGGTCGGTGACATTCTTGGTAAGATATGAGATTAAAGCTTTTCTTTCGTGATTATGGTCTATTAGTTGTAAAAAAATCTGGGCGATATATAGCTAAACGTATTTGATTTTGCAGTTTTCAACTTTGCAACGGGACGACACGACGCAACAGAAGTGACAAAAAGTGCTTATGATTCCTGCAACGGCAACAATCCGATCTCCACCGAGAGCAACAGTCCAGTAAGGATCACACTCACTTCTGCTGGTAACCGTCACTTCATCTGCACCATTCCCGGGCATTGCAATAATGGCCAAAAGTTATCCGTTACTGTGAGAGCCACATCTGCTCCAGCGCCATCTCCTGTCCCTGTCTCCGTCCCCACTCCCTCTATCAGCCCTGAACCCTCCTCTTCCGATCGGTCGCCTTCTCCAACACCTAGCTTTACTCCGTCATCACCTGTCCCGTCGCCTGCTCCCGCCCGACAACCCATGACATATGTTGTCGGAGACTCGTTGGGATGGTCCGTCCCTAACAACCCTAGCTTTTACGAATCATGGGCTCGGGACAACACCTTCGTCGTTGGAGACATTCTCGGTAAGGACAAAAATTTGACATTCAAACAGATATATATATATATGTATATATGTATATATTTTAAATTGGGTAGTAAATTAGAAAATAAATTTTTAAATCTTAAATTTGGTTAAATTATATATTTATAATCAATTTAAATTATGCACTTTAATGATTAAAATAGAAATGAAAAAGAAGCTCATCTTCTCCGGCGATCTTTTGCAGAGTTCAACTTCGTGGTTCAAACCCACAACGTAGCGAAGGTAACGAAGGACAATTACGGCAGTTGCACCGGCGAATCGCCGATCTCTATTTCCACCGACCCGCCGGTCAGAATCACTCTCTCCGAACCCGGCGAACATTTCTTCATCTGCACGGTCGCCGGCCACTGCAACATCGGCCAGAAGCTAGCCGTCAACGTCGCCGGCAGTGACGCCACCACTCCTCCGCCCTCATCTGACACCGTGCCTTCAACTCCATCTCCAGCAACCGCTCCACCGCCTCCCAGCGCCGCCCCATCGGTCCGAGCCTCTGCCTTCTCCGCAGCTCTTCTCGCCGTCGCCGTTGCCTTGGTGTTTTAGCCGCCGCGGCGTTAATTAATCTAAATTTTTGCTAGGGTTTCTTGGTCTTCGTATTCATTAGATTTATAATAAGATTTTATTTATTTTATAATATTTTATTACACGTGTGAATTTTCTATTGGTTGATGTAAATTTGAGAATTTTTATAATAAGACTAC

mRNA sequence

CTCAAAAGAGCTTAATCACAAGGGTGACCTGAGAACATCAAATCAAATCATGGCCGTAGGATTTAACCGGATGGTGGTTCTCCTCGTCGTGGTGGCAACTTTGTGGCGGTGCTCGTCCGCTGCCACCTACATGGTCGGTGACTCGTTGGGTTGGATCGACCCACCCAATGCTAATATTTATACTGATTGGGCTAGCAATAAGACTTTTGTGGTCGGTGACATTCTTGTTTTCAACTTTGCAACGGGACGACACGACGCAACAGAAGTGACAAAAAGTGCTTATGATTCCTGCAACGGCAACAATCCGATCTCCACCGAGAGCAACAGTCCAGTAAGGATCACACTCACTTCTGCTGGTAACCGTCACTTCATCTGCACCATTCCCGGGCATTGCAATAATGGCCAAAAGTTATCCGTTACTGTGAGAGCCACATCTGCTCCAGCGCCATCTCCTGTCCCTGTCTCCGTCCCCACTCCCTCTATCAGCCCTGAACCCTCCTCTTCCGATCGGTCGCCTTCTCCAACACCTAGCTTTACTCCGTCATCACCTGTCCCGTCGCCTGCTCCCGCCCGACAACCCATGACATATGTTGTCGGAGACTCGTTGGGATGGTCCGTCCCTAACAACCCTAGCTTTTACGAATCATGGGCTCGGGACAACACCTTCGTCGTTGGAGACATTCTCGAGTTCAACTTCGTGGTTCAAACCCACAACGTAGCGAAGGTAACGAAGGACAATTACGGCAGTTGCACCGGCGAATCGCCGATCTCTATTTCCACCGACCCGCCGGTCAGAATCACTCTCTCCGAACCCGGCGAACATTTCTTCATCTGCACGGTCGCCGGCCACTGCAACATCGGCCAGAAGCTAGCCGTCAACGTCGCCGGCAGTGACGCCACCACTCCTCCGCCCTCATCTGACACCGTGCCTTCAACTCCATCTCCAGCAACCGCTCCACCGCCTCCCAGCGCCGCCCCATCGGTCCGAGCCTCTGCCTTCTCCGCAGCTCTTCTCGCCGTCGCCGTTGCCTTGGTGTTTTAGCCGCCGCGGCGTTAATTAATCTAAATTTTTGCTAGGGTTTCTTGGTCTTCGTATTCATTAGATTTATAATAAGATTTTATTTATTTTATAATATTTTATTACACGTGTGAATTTTCTATTGGTTGATGTAAATTTGAGAATTTTTATAATAAGACTAC

Coding sequence (CDS)

ATGGCCGTAGGATTTAACCGGATGGTGGTTCTCCTCGTCGTGGTGGCAACTTTGTGGCGGTGCTCGTCCGCTGCCACCTACATGGTCGGTGACTCGTTGGGTTGGATCGACCCACCCAATGCTAATATTTATACTGATTGGGCTAGCAATAAGACTTTTGTGGTCGGTGACATTCTTGTTTTCAACTTTGCAACGGGACGACACGACGCAACAGAAGTGACAAAAAGTGCTTATGATTCCTGCAACGGCAACAATCCGATCTCCACCGAGAGCAACAGTCCAGTAAGGATCACACTCACTTCTGCTGGTAACCGTCACTTCATCTGCACCATTCCCGGGCATTGCAATAATGGCCAAAAGTTATCCGTTACTGTGAGAGCCACATCTGCTCCAGCGCCATCTCCTGTCCCTGTCTCCGTCCCCACTCCCTCTATCAGCCCTGAACCCTCCTCTTCCGATCGGTCGCCTTCTCCAACACCTAGCTTTACTCCGTCATCACCTGTCCCGTCGCCTGCTCCCGCCCGACAACCCATGACATATGTTGTCGGAGACTCGTTGGGATGGTCCGTCCCTAACAACCCTAGCTTTTACGAATCATGGGCTCGGGACAACACCTTCGTCGTTGGAGACATTCTCGAGTTCAACTTCGTGGTTCAAACCCACAACGTAGCGAAGGTAACGAAGGACAATTACGGCAGTTGCACCGGCGAATCGCCGATCTCTATTTCCACCGACCCGCCGGTCAGAATCACTCTCTCCGAACCCGGCGAACATTTCTTCATCTGCACGGTCGCCGGCCACTGCAACATCGGCCAGAAGCTAGCCGTCAACGTCGCCGGCAGTGACGCCACCACTCCTCCGCCCTCATCTGACACCGTGCCTTCAACTCCATCTCCAGCAACCGCTCCACCGCCTCCCAGCGCCGCCCCATCGGTCCGAGCCTCTGCCTTCTCCGCAGCTCTTCTCGCCGTCGCCGTTGCCTTGGTGTTTTAG

Protein sequence

MAVGFNRMVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILVFNFATGRHDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQKLSVTVRATSAPAPSPVPVSVPTPSISPEPSSSDRSPSPTPSFTPSSPVPSPAPARQPMTYVVGDSLGWSVPNNPSFYESWARDNTFVVGDILEFNFVVQTHNVAKVTKDNYGSCTGESPISISTDPPVRITLSEPGEHFFICTVAGHCNIGQKLAVNVAGSDATTPPPSSDTVPSTPSPATAPPPPSAAPSVRASAFSAALLAVAVALVF

Homology

[Close]

BLAST of CmoCh12G012260 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-24
Identity = 51/102 (50.00%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 180 YVVGDSLGWSVPNNPSFYESWARDNTFVVGDILEFNFVVQTHNVAKVTKDNYGSCTGESP 239
           Y VG  + W  P++P FY +WA   TF VGD LEF+F    H+VA VTKD + +C  E+P
Sbjct: 3   YDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENP 62

Query: 240 ISISTDPPVRITLSEPGEHFFICTVAGHCNIGQKLAVNVAGS 282
           IS  T PPV+I L+  G  ++ICTV  HC +GQKL++NV G+
Sbjct: 63  ISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGA 104

[Close]

BLAST of CmoCh12G012260 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 110.5 bits (275), Expect = 3.6e-23
Identity = 60/135 (44.44%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 176 QPMTYVVGDSLGWSVPNNPSFYESWARDNTFVVGDILEFNFVVQTHNVAKV-TKDNYGSC 235
           Q   ++VGD+ GWSVP++P+FY  WA   TF VGD L+FNF    HNV ++ TK ++ +C
Sbjct: 1   QSTVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDAC 60

Query: 236 T-GESPISISTDPPVRITLSEPGEHFFICTVAGHCNIGQKLAVNVAGSDAT-TPPPSSDT 295
               S   +    PV   L E G H+F+CTV  HC+ GQKL++NV  ++AT + PP S +
Sbjct: 61  NFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMPPPSSS 120

Query: 296 VPSTPSPATAPPPPS 308
            PS+  P    PPPS
Sbjct: 121 PPSSVMPPPVMPPPS 135

[Close]

BLAST of CmoCh12G012260 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-21
Identity = 70/178 (39.33%), Postives = 95/178 (53.37%), Query Frame = 0


Query: 3   VGFNRMVVL--LVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILV 62
           + F+  +VL  L+ +  +   S A  Y VGD+ GW+       Y+ WAS+KTF VGD LV
Sbjct: 1   MAFSNALVLCFLLAIINMALPSLATVYTVGDTSGWV---IGGDYSTWASDKTFAVGDSLV 60

Query: 63  FNFATGRHDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQK 122
           FN+  G H   EV +S Y SC   N IST+S     I L  AG  +FIC +PGH   G K
Sbjct: 61  FNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMK 120

Query: 123 LSVTVRATSAPAPSPVPVSVPTPSISPEPSSSDRSPSPTPSFTPSSPVPSPAPARQPM 179
           LS+ V+A+S    S  P + P+ S    PSS D   + T + TP+    S A +  P+
Sbjct: 121 LSIKVKASS--GSSAAPSATPSSSGKGSPSSDDTPAATTTTTTPTKQNESSATSLSPI 173

[Close]

BLAST of CmoCh12G012260 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 3.1e-19
Identity = 70/176 (39.77%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 1   MAVGFNRMVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILV 60
           MA  F  +  L++V A +     A  Y VGD   W  P +   YT WA+ KTF VGD L 
Sbjct: 1   MAGVFKTVTFLVLVFAAV--VVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELE 60

Query: 61  FNFATGRHDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQK 120
           F+FA GRHD   V+++A+++C    PIS  +  PV+I L + G ++FICT+  HC  GQK
Sbjct: 61  FDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQK 120

Query: 121 LSVTVRATSAPAPSPVPVSVPTPSISPEPSSSDRSPSPTP--SFTPSSPVPSPAPA 175
           LS+TV A  A      P +  TP+    PS+   +P PT   + TPS    +  PA
Sbjct: 121 LSITVVAAGATG-GATPGAGATPAPGSTPSTGGTTP-PTAGGTTTPSGSSGTTTPA 172

[Close]

BLAST of CmoCh12G012260 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.0e-18
Identity = 66/171 (38.60%), Postives = 98/171 (57.31%), Query Frame = 0


Query: 8   MVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILVFNFATGR 67
           ++++ V+  TL   + A  + +G   GW     A++ T WA+ +TF VGD LVF++    
Sbjct: 7   LIIISVLATTLIGLTVATDHTIGGPSGW--TVGASLRT-WAAGQTFAVGDNLVFSYPAAF 66

Query: 68  HDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQKLSVTVRA 127
           HD  EVTK  +DSC    P+ T +N    + LT+ G R+FIC +PGHC+ G KL V V  
Sbjct: 67  HDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVVP 126

Query: 128 TSAPAP-SPVPVSVPTPSISPEPSS----SDRSP-SPTPSFTPSSPVPSPA 173
           T+  AP +P+P +VP+ + +P PSS        P +P P  +PSS  P P+
Sbjct: 127 TATVAPTAPLPNTVPSLN-APSPSSVLPIQPLLPLNPVPVLSPSSSTPLPS 173

[Close]

BLAST of CmoCh12G012260 vs. ExPASy TrEMBL
Match: A0A6J1FGR2 (blue copper protein-like OS=Cucurbita moschata OX=3662 GN=LOC111443872 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 6.2e-180
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MAVGFNRMVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILV 60
           MAVGFNRMVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILV
Sbjct: 39  MAVGFNRMVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILV 98

Query: 61  FNFATGRHDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQK 120
           FNFATGRHDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQK
Sbjct: 99  FNFATGRHDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQK 158

Query: 121 LSVTVRATSAPAPSPVPVSVPTPSISPEPSSSDRSPSPTPSFTPSSPVPSPAPARQPMTY 180
           LSVTVRATSAPAPSPVPVSVPTPSISPEPSSSDRSPSPTPSFTPSSPVPSPAPARQPMTY
Sbjct: 159 LSVTVRATSAPAPSPVPVSVPTPSISPEPSSSDRSPSPTPSFTPSSPVPSPAPARQPMTY 218

Query: 181 VVGDSLGWSVPNNPSFYESWARDNTFVVGDILEFNFVVQTHNVAKVTKDNYGSCTGESPI 240
           VVGDSLGWSVPNNPSFYESWARDNTFVVGDILEFNFVVQTHNVAKVTKDNYGSCTGESPI
Sbjct: 219 VVGDSLGWSVPNNPSFYESWARDNTFVVGDILEFNFVVQTHNVAKVTKDNYGSCTGESPI 278

Query: 241 SISTDPPVRITLSEPGEHFFICTVAGHCNIGQKLAVNVAGSDATTPPPSSDTVPSTPSPA 300
           SISTDPPVRITLSEPGEHFFICTVAGHCNIGQKLAVNVAGSDATTPPPSSDTVPSTPSPA
Sbjct: 279 SISTDPPVRITLSEPGEHFFICTVAGHCNIGQKLAVNVAGSDATTPPPSSDTVPSTPSPA 338

Query: 301 TAPPPPSAAPSVRASAFSAALLAVAVALVF 331
           TAPPPPSAAPSVRASAFSAALLAVAVALVF
Sbjct: 339 TAPPPPSAAPSVRASAFSAALLAVAVALVF 368

[Close]

BLAST of CmoCh12G012260 vs. ExPASy TrEMBL
Match: A0A6J1HQ41 (blue copper protein-like OS=Cucurbita maxima OX=3661 GN=LOC111465596 PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 2.5e-168
Identity = 313/338 (92.60%), Postives = 322/338 (95.27%), Query Frame = 0


Query: 1   MAVGFNRMVVLLVV-VATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDIL 60
           MAVGFNRMVVLL+V  ATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDIL
Sbjct: 1   MAVGFNRMVVLLLVAAATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDIL 60

Query: 61  VFNFATGRHDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQ 120
           VFNFATGRHD TEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQ
Sbjct: 61  VFNFATGRHDVTEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQ 120

Query: 121 KLSVTVRATSA-------PAPSPVPVSVPTPSISPEPSSSDRSPSPTPSFTPSSPVPSPA 180
           KLSVTVRATSA       PAPSPVPVSVP PSISPEPSSSDRSPSPTPSFTPSSPVPS A
Sbjct: 121 KLSVTVRATSAPTPQPSSPAPSPVPVSVPAPSISPEPSSSDRSPSPTPSFTPSSPVPSRA 180

Query: 181 PARQPMTYVVGDSLGWSVPNNPSFYESWARDNTFVVGDILEFNFVVQTHNVAKVTKDNYG 240
           P RQPMTYVVGDSLGWSVPNNP+FYESWA+D TFVVGDILEFNFV+QTHNVAKVTKDNYG
Sbjct: 181 PTRQPMTYVVGDSLGWSVPNNPTFYESWAQDKTFVVGDILEFNFVIQTHNVAKVTKDNYG 240

Query: 241 SCTGESPISISTDPPVRITLSEPGEHFFICTVAGHCNIGQKLAVNVAGSDATTPPPSSDT 300
           SC+GESPISIST+PPVRITLSEPGEHF+ICTVAGHCNIGQKLAVNV GS+ATTPPPSSDT
Sbjct: 241 SCSGESPISISTNPPVRITLSEPGEHFYICTVAGHCNIGQKLAVNVTGSEATTPPPSSDT 300

Query: 301 VPSTPSPATAPPPPSAAPSVRASAFSAALLAVAVALVF 331
           VPSTPSPATAPPPPSAAPSVR SAFSAALLAVAVALV+
Sbjct: 301 VPSTPSPATAPPPPSAAPSVRTSAFSAALLAVAVALVY 338

[Close]

BLAST of CmoCh12G012260 vs. ExPASy TrEMBL
Match: A0A1S3C477 (uclacyanin-3-like OS=Cucumis melo OX=3656 GN=LOC103496690 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 7.8e-122
Identity = 240/339 (70.80%), Postives = 277/339 (81.71%), Query Frame = 0


Query: 1   MAVGFNR-MVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDIL 60
           MAV FNR  ++LL+V A+  R SSAATY VGD+LGW  PPN  IY+DWAS KTFVVGDIL
Sbjct: 1   MAVVFNRTAILLLLVAASFCRSSSAATYTVGDALGWTVPPNPTIYSDWASTKTFVVGDIL 60

Query: 61  VFNFATGRHDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQ 120
           VFNFA+GRHD TEVTKSA DSCN  NPIS  +NSP RITLTSAG+ HFIC+ PGHC+NGQ
Sbjct: 61  VFNFASGRHDVTEVTKSASDSCNSTNPISVANNSPARITLTSAGDHHFICSFPGHCSNGQ 120

Query: 121 KLSVTVRATS---APAPSPVPVSVPTPSISPEPSSSDRSPSPTPSFTP-SSPVPSPAPAR 180
            LS+TVR+TS   AP PS  P   P+PS++PEPSSS  SPSP+PS TP SSPVPSPAP+R
Sbjct: 121 TLSITVRSTSSSPAPQPSSRPSPSPSPSLAPEPSSSTPSPSPSPSSTPSSSPVPSPAPSR 180

Query: 181 QPMTYVVGDSLGWSVPNNPSFYESWARDNTFVVGDILEFNFVVQTHNVAKVTKDNYGSCT 240
           +PMTYVVGDS GW+VP +P+FY+SWA+  TFVVGD+LEFNF +Q H+VAKVTKDNY SC+
Sbjct: 181 EPMTYVVGDSFGWNVPTSPNFYDSWAQGKTFVVGDVLEFNFAIQRHDVAKVTKDNYDSCS 240

Query: 241 GESPISISTDPPVRITLSEPGEHFFICTVAGHCNIGQKLAVNVAGSDATTPP----PSSD 300
           G+SPIS ST PPV+ITLSEPGEHFFICT AGHC++GQKLA+NV    AT P     P SD
Sbjct: 241 GQSPISFSTSPPVKITLSEPGEHFFICTFAGHCSVGQKLAINVTDGTATPPSSIALPPSD 300

Query: 301 TVPSTPSPATA-PPPPSAAPSVRASAFSAALLAVAVALV 330
           TVPSTPSP TA PPPP+AA S++ASAF A LLAVAVAL+
Sbjct: 301 TVPSTPSPTTAPPPPPNAAASLQASAFFATLLAVAVALI 339

[Close]

BLAST of CmoCh12G012260 vs. ExPASy TrEMBL
Match: A0A5A7V8N6 (Uclacyanin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00800 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.8e-121
Identity = 239/339 (70.50%), Postives = 277/339 (81.71%), Query Frame = 0


Query: 1   MAVGFNR-MVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDIL 60
           MAV FNR  ++LL+V A+  R S AATY VGD+LGW  PPN  IY+DWAS KTFVVGDIL
Sbjct: 1   MAVVFNRTAILLLLVAASFCRSSFAATYTVGDALGWTVPPNPTIYSDWASTKTFVVGDIL 60

Query: 61  VFNFATGRHDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQ 120
           VFNFA+GRHD TEVTKSA DSCN  NPIS  +NSP RITLTSAG+ HFIC+ PGHC+NGQ
Sbjct: 61  VFNFASGRHDVTEVTKSASDSCNSTNPISVANNSPARITLTSAGDHHFICSFPGHCSNGQ 120

Query: 121 KLSVTVRATS---APAPSPVPVSVPTPSISPEPSSSDRSPSPTPSFTP-SSPVPSPAPAR 180
            LS+TVR+TS   AP PS  P   P+PS++PEPSSS  SPSP+PS TP SSPVPSPAP+R
Sbjct: 121 TLSITVRSTSSSPAPQPSSRPSPSPSPSLAPEPSSSTPSPSPSPSSTPSSSPVPSPAPSR 180

Query: 181 QPMTYVVGDSLGWSVPNNPSFYESWARDNTFVVGDILEFNFVVQTHNVAKVTKDNYGSCT 240
           +PMTYVVGDS GW+VP +P+FY+SWA+  TFVVGD+LEFNF +Q H+VAKVTKDNY SC+
Sbjct: 181 EPMTYVVGDSFGWNVPTSPNFYDSWAQGKTFVVGDVLEFNFAIQRHDVAKVTKDNYDSCS 240

Query: 241 GESPISISTDPPVRITLSEPGEHFFICTVAGHCNIGQKLAVNVAGSDATTPP----PSSD 300
           G+SPIS+ST PPV+ITLSEPGEHFFICT AGHC++GQKLA+NV    AT P     P SD
Sbjct: 241 GQSPISLSTSPPVKITLSEPGEHFFICTFAGHCSVGQKLAINVTDGTATPPSSIALPPSD 300

Query: 301 TVPSTPSPATA-PPPPSAAPSVRASAFSAALLAVAVALV 330
           TVPSTPSP TA PPPP+AA S++ASAF A LLAVAVAL+
Sbjct: 301 TVPSTPSPNTAPPPPPNAAASLQASAFFATLLAVAVALI 339

[Close]

BLAST of CmoCh12G012260 vs. ExPASy TrEMBL
Match: A0A0A0LG03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006880 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 1.0e-118
Identity = 228/330 (69.09%), Postives = 265/330 (80.30%), Query Frame = 0


Query: 9   VVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILVFNFATGRH 68
           ++ L+V A   R SSAATY VGD+LGW  PPN  +Y+DWAS KTFVVGDILVFNFA+GRH
Sbjct: 7   ILFLLVAAAFCRSSSAATYTVGDALGWTVPPNPTVYSDWASTKTFVVGDILVFNFASGRH 66

Query: 69  DATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQKLSVTVRAT 128
           D TEVTKSA DSCN  NPIS  +NSP RITLTSAG+RHFIC+ PGHC+NGQ LS+TV +T
Sbjct: 67  DVTEVTKSASDSCNSTNPISVANNSPARITLTSAGDRHFICSFPGHCSNGQTLSITVTST 126

Query: 129 S---APAPSPVPVSVPTPSISPEPSSSDRSPSPTPSFTP-SSPVPSPAPARQPMTYVVGD 188
           S   AP PS  P   P P   P PS S RSPSP+PS TP SSPVPSP P+R+PMTY+VGD
Sbjct: 127 SSSPAPQPSSRPSPSPVPVPVPSPSPSARSPSPSPSSTPSSSPVPSPTPSREPMTYIVGD 186

Query: 189 SLGWSVPNNPSFYESWARDNTFVVGDILEFNFVVQTHNVAKVTKDNYGSCTGESPISIST 248
           S GW+VP +P+FY+SWA+  TFVVGD+LEFNF++Q H+VAKVTKDNY SC+G+SPIS++T
Sbjct: 187 SFGWNVPTSPTFYDSWAQGKTFVVGDVLEFNFLIQRHDVAKVTKDNYASCSGQSPISLTT 246

Query: 249 DPPVRITLSEPGEHFFICTVAGHCNIGQKLAVNVAGSDATTPP----PSSDTVPSTPSPA 308
            PPV+ITLSEPGEHFFICT AGHC+ GQKLA+NV G+ AT P     P SDTVPSTPSP 
Sbjct: 247 SPPVKITLSEPGEHFFICTFAGHCSFGQKLAINVTGAPATPPSSIALPPSDTVPSTPSPT 306

Query: 309 TAPPPPSAAPSVRASAFSAALLAVAVALVF 331
           TAPPPP+AA S+RASAF A  LAVAVAL +
Sbjct: 307 TAPPPPNAAASLRASAFFATFLAVAVALFY 336

[Close]

BLAST of CmoCh12G012260 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein )

HSP 1 Score: 97.4 bits (241), Expect = 2.2e-20
Identity = 70/176 (39.77%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 1   MAVGFNRMVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILV 60
           MA  F  +  L++V A +     A  Y VGD   W  P +   YT WA+ KTF VGD L 
Sbjct: 1   MAGVFKTVTFLVLVFAAV--VVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELE 60

Query: 61  FNFATGRHDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQK 120
           F+FA GRHD   V+++A+++C    PIS  +  PV+I L + G ++FICT+  HC  GQK
Sbjct: 61  FDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQK 120

Query: 121 LSVTVRATSAPAPSPVPVSVPTPSISPEPSSSDRSPSPTP--SFTPSSPVPSPAPA 175
           LS+TV A  A      P +  TP+    PS+   +P PT   + TPS    +  PA
Sbjct: 121 LSITVVAAGATG-GATPGAGATPAPGSTPSTGGTTP-PTAGGTTTPSGSSGTTTPA 172

[Close]

BLAST of CmoCh12G012260 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 6.5e-20
Identity = 68/167 (40.72%), Postives = 87/167 (52.10%), Query Frame = 0


Query: 8   MVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILVFNFATGR 67
           +V  L  +  + R S AA Y VGDS GW    N + Y  WAS KTF +GD ++F +    
Sbjct: 5   IVAALACIVVMLRLSEAAVYKVGDSAGWTTIANVD-YKLWASTKTFHIGDTVLFEYNPQF 64

Query: 68  HDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQKLSVTVRA 127
           H+   VT   Y SCN + PIST +     ITLT+ G+  F C +PGHC  GQKL + V  
Sbjct: 65  HNVMRVTHPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKLDLHV-- 124

Query: 128 TSAPAPSPVPVSVPTPSISPEPSSSDRSPSPTPSFTPSSPVPSPAPA 175
              PA S       TP   P  SSS   PS T    P++ VP P+P+
Sbjct: 125 -LLPASS-------TPLSDPPTSSSSSPPSTT---IPAAGVPGPSPS 157

[Close]

BLAST of CmoCh12G012260 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 )

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-19
Identity = 66/171 (38.60%), Postives = 98/171 (57.31%), Query Frame = 0


Query: 8   MVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILVFNFATGR 67
           ++++ V+  TL   + A  + +G   GW     A++ T WA+ +TF VGD LVF++    
Sbjct: 7   LIIISVLATTLIGLTVATDHTIGGPSGW--TVGASLRT-WAAGQTFAVGDNLVFSYPAAF 66

Query: 68  HDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQKLSVTVRA 127
           HD  EVTK  +DSC    P+ T +N    + LT+ G R+FIC +PGHC+ G KL V V  
Sbjct: 67  HDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVVP 126

Query: 128 TSAPAP-SPVPVSVPTPSISPEPSS----SDRSP-SPTPSFTPSSPVPSPA 173
           T+  AP +P+P +VP+ + +P PSS        P +P P  +PSS  P P+
Sbjct: 127 TATVAPTAPLPNTVPSLN-APSPSSVLPIQPLLPLNPVPVLSPSSSTPLPS 173

[Close]

BLAST of CmoCh12G012260 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 2.5e-19
Identity = 65/154 (42.21%), Postives = 84/154 (54.55%), Query Frame = 0


Query: 8   MVVLLVVVATLWRCSSAATYMVGDSLGWIDPPNANIYTDWASNKTFVVGDILVFNFATGR 67
           +++LLV V  ++    A T+ VGD+ GW        YT W S KTF VGD L F +    
Sbjct: 11  LLLLLVAVPAVF----AVTFQVGDNDGWTIGVE---YTSWVSEKTFRVGDTLEFKYGPS- 70

Query: 68  HDATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQKLSVTVRA 127
           H    V K+ YD C  + P  + S+   +I LT  G  HF+C  PGHC+ G KL+V V A
Sbjct: 71  HSVAVVNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAVQVLA 130

Query: 128 TSAPAPSPVPVSVPTPSIS-PEPSSSDRSPSPTP 161
             +  P P P S P+PS S P PS S  SPSP+P
Sbjct: 131 AVSLEPPPSP-SAPSPSPSAPSPSPSAPSPSPSP 155

[Close]

BLAST of CmoCh12G012260 vs. TAIR 10
Match: AT2G31050.1 (Cupredoxin superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-17
Identity = 67/166 (40.36%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 11  LLVVVATLWRCSSAATYMVGDSLGW-IDPPNANIYTDWASNKTFVVGDILVFNFATGRHD 70
           LL++VA          + VGDS GW I   N   Y  WAS  TF VGD LVF +    HD
Sbjct: 13  LLILVALFGISVGGTVHKVGDSDGWTIMSVN---YETWASTITFQVGDSLVFKYNKDFHD 72

Query: 71  ATEVTKSAYDSCNGNNPISTESNSPVRITLTSAGNRHFICTIPGHCNNGQKLSVTV-RAT 130
            TEVT + Y+ C  + P++        + LT  G +HFIC  PGHC+ GQKL + V  A+
Sbjct: 73  VTEVTHNDYEMCEPSKPLARYETGSDIVILTKPGLQHFICGFPGHCDMGQKLQIHVLPAS 132

Query: 131 SAPAPSPVPVSVPTPSISPEPSSSDRSPSPTPSFTPSSPV-PSPAP 174
             P  +PVP  V  PS    PS S  + SP         + PSPAP
Sbjct: 133 LGPVAAPVPGPVRPPSSFSSPSQSPLAESPVNHAPVQYQMGPSPAP 175

The following BLAST results are available for this feature:

BLAST of CmoCh12G012260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42849	1.1e-24	50.00	Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1	[more]
P29602	3.6e-23	44.44	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
Q41001	1.5e-21	39.33	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q07488	3.1e-19	39.77	Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2	[more]
O82081	2.0e-18	38.60	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]

BLAST of CmoCh12G012260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGR2	6.2e-180	100.00	blue copper protein-like OS=Cucurbita moschata OX=3662 GN=LOC111443872 PE=4 SV=1	[more]
A0A6J1HQ41	2.5e-168	92.60	blue copper protein-like OS=Cucurbita maxima OX=3661 GN=LOC111465596 PE=4 SV=1	[more]
A0A1S3C477	7.8e-122	70.80	uclacyanin-3-like OS=Cucumis melo OX=3656 GN=LOC103496690 PE=4 SV=1	[more]
A0A5A7V8N6	3.8e-121	70.50	Uclacyanin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00...	[more]
A0A0A0LG03	1.0e-118	69.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006880 PE=4 SV=1	[more]

BLAST of CmoCh12G012260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20230.1	2.2e-20	39.77	blue-copper-binding protein	[more]
AT5G26330.1	6.5e-20	40.72	Cupredoxin superfamily protein	[more]
AT2G32300.1	1.4e-19	38.60	uclacyanin 1	[more]
AT3G60270.1	2.5e-19	42.21	Cupredoxin superfamily protein	[more]
AT2G31050.1	1.8e-17	40.36	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 25..135 e-value: 7.6E-36 score: 124.6 coord: 178..288 e-value: 1.3E-34 score: 120.7
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 24..125
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 178..278
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 188..272 e-value: 3.4E-23 score: 81.5 coord: 35..119 e-value: 1.6E-23 score: 82.5
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 25..127 score: 43.701191
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 178..280 score: 38.195576
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..176
None	No IPR available	PANTHER	PTHR33021:SF190	UMECYANIN-LIKE	coord: 7..141
None	No IPR available	PANTHER	PTHR33021:SF190	UMECYANIN-LIKE	coord: 177..317
None	No IPR available	CDD	cd13920	Stellacyanin	coord: 178..278 e-value: 4.52039E-44 score: 144.763
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 177..317
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 7..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G012260.1	CmoCh12G012260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0009055	electron transfer activity