CmoCh12G012250 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G012250
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Coactivator CBP, KIX domain containing protein
Location	Cmo_Chr12: 10943113 .. 10945178 (+)
RNA-Seq Expression	CmoCh12G012250
Synteny	CmoCh12G012250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTTGAAATGGCTGAAAATGGAGGAAAATCAGCCAATACCCAGAAGAAATCGAGGCGAATTTGAGGTAGAAATGGGTTGTTTTTGAAATTTGAAGATAGATTCAAGAACCCCTTTGAGGGTTGTCGCTGTTTTGGGCGGTGGTGGCCCATGGCGCAAGGTAATCGATGTGCTAATAGCTGAAATGTTGTGGCAGGGAGGTTTTACAGGCACTTTTTGAAGCCCACCCCCACCCCCTCCACTTTATTTTCCCCAATAGGTGACACTCCTTATACACAAAAACAAGTAGATTGAATTGAACATCAAACTTTGAGGGTAAACTATCTTGAATTATTGAAGAAGACAAAGAATGCGGAGAACCCATCAAAAACTGTCCCATTGCTGATTGGGGAACGAAAATGGAGGATTAAACGAGTGAGTAAATGTGAAATCATCCAACCCCATCTCCACTACGAACGATTTTCGGGTTCTTAAGGGTTTCGAATCGTTTTTTTTGGTTGATTTTTCCTCGTTTCGTCGAGGATTTTGTGCTTCCGACTGGCTGAGATGCCGCGGCCAGGCCCGAGACCGTATGAGTGCGTGCGGCGAGCTTGGCATAGTGATAGACATCAGCCGATGAGAGGTTCCATTATTCAGCAAATTTTCAGGTTCTGGGTCGTTTTAAACTTGGCTGATTCTCTTCGATTTGATTGTGTTTTTCTTGTTCTTGTTTTTGTGCATTTTGGTGAATTGCACACCATGTGTTTGATCAGAGTTGTCAATGAGAATCATAGCCCTGCTACTAAAAAGAACAAGGAATGGCAGGAGAAATTGCCGATTGTGGTTTTGAAAGCTGAAGAAATCATGTATTCTAAAGCTAATTCTGAGGTATTTCCCCCTTTTCCTCTTCTGGGTTTTGCTCCAATTTGGATCTTGTTCTTGTTTGAAGCTTTGGATTTCGTCCATTTAATTTTGCTTAGGTTGAGTACATGAATCTTGAGACAGTTTGGGAGCGTTTGAATGATGCTGTTAATACCATAATTCGAAGAGATGAACACAGTGAAACTGGTGAGCTTTTGCCTCCCTGTGTTGAAGGTATAAACCAAATGGTTTCATTTCAAGTTCTTGGATCTAATCATTAAACTCTGCTCTCAAATGGTTTGGTTTGTTGTTTGTTGTTTGTCATTTGTTTTGCTTCTTCTCTGTGGTATGCAGCTGCACTAAACCTCGGCTGCGTTCCGGTACGAGCTTCTCGGAGCCAACGCCATACGAATCCCAGGACATATCTTACTCCAAGAACACAAGAACCATCTACTCTTGCTACCACATTGGATAAAGCCAGTGATGAAAGACCCCTACCGACGTCATTGTTGCGCCTGAGCAACCAGTTGAGTTTTCCACGAGCCACGGCTATGAACTCGAGTATGTTTGGTTCTGAGCATAACAGCCCTACCATTCCAAGTAACCCTGCTTTCTTGATTGAGAATGTTCACAATTACAACTATTCAATGACTGACCTGGGATCTGTTTATCCATTGTATTATGGAATTCGTTTTCGAACTGAAGAGCCGAACGTAGGCTCCCGGTGTTCTGTAGATGCCAACCAACAGACGATATTTTTGGGTAGACCGGTCGTGTCGAGTGCAGAGCCTGCTGAGCTTAGTCTTTGCGCTCGTAAAACTGGAAATGCTATGAGCAGATTCCCATCAGAAGTTATCACAGACACAGAATGTGATTTATCTTTGAGGTTGGGAGTACCTTCCCAGCCATGTGTGAGTACTGGGAAGCCTTGGGCTTCTGAAACCGGAGACATTGGTTCAAGCAGTTCCCATGAGCGGAACAAGTTCCACGATCGACCCATTTACGCAACTAAAGAGTTCACTTTTTTCCCTAACAGAACTTCGTTCGATCCGTCTGGTTCCTGCTCGAATATGTGGAGCTCAGATTGGAGGGGTCAGAATCCAGAATCTTTCACGAAAAAGCGCAAAGAGCCCATTCGTAGCGACGAGGAGGACGAACCATTTTGTCTTCCACCCGAGGCTCCATCTAACTGGTTTGGCAGTCGAACGAAAAGGCCAGGTTTGTAG

mRNA sequence

ATCTTTGAAATGGCTGAAAATGGAGGAAAATCAGCCAATACCCAGAAGAAATCGAGGCGAATTTGAGGTAGAAATGGGTTGTTTTTGAAATTTGAAGATAGATTCAAGAACCCCTTTGAGGGTTGTCGCTGTTTTGGGCGGTGGTGGCCCATGGCGCAAGGTAATCGATGTGCTAATAGCTGAAATGTTGTGGCAGGGAGGTTTTACAGGCACTTTTTGAAGCCCACCCCCACCCCCTCCACTTTATTTTCCCCAATAGGTGACACTCCTTATACACAAAAACAAGTAGATTGAATTGAACATCAAACTTTGAGGGTAAACTATCTTGAATTATTGAAGAAGACAAAGAATGCGGAGAACCCATCAAAAACTGTCCCATTGCTGATTGGGGAACGAAAATGGAGGATTAAACGAGTGAGTAAATGTGAAATCATCCAACCCCATCTCCACTACGAACGATTTTCGGGTTCTTAAGGGTTTCGAATCGTTTTTTTTGGTTGATTTTTCCTCGTTTCGTCGAGGATTTTGTGCTTCCGACTGGCTGAGATGCCGCGGCCAGGCCCGAGACCGTATGAGTGCGTGCGGCGAGCTTGGCATAGTGATAGACATCAGCCGATGAGAGGTTCCATTATTCAGCAAATTTTCAGGTTCTGGGTCGTTTTAAACTTGGCTGATTCTCTTCGATTTGATTGTGTTTTTCTTGTTCTTGTTTTTGTGCATTTTGGTGAATTGCACACCATGTGTTTGATCAGAGTTGTCAATGAGAATCATAGCCCTGCTACTAAAAAGAACAAGGAATGGCAGGAGAAATTGCCGATTGTGGTTTTGAAAGCTGAAGAAATCATGTATTCTAAAGCTAATTCTGAGGTTGAGTACATGAATCTTGAGACAGTTTGGGAGCGTTTGAATGATGCTGTTAATACCATAATTCGAAGAGATGAACACAGTGAAACTGGTGAGCTTTTGCCTCCCTGTGTTGAAGCTGCACTAAACCTCGGCTGCGTTCCGGTACGAGCTTCTCGGAGCCAACGCCATACGAATCCCAGGACATATCTTACTCCAAGAACACAAGAACCATCTACTCTTGCTACCACATTGGATAAAGCCAGTGATGAAAGACCCCTACCGACGTCATTGTTGCGCCTGAGCAACCAGTTGAGTTTTCCACGAGCCACGGCTATGAACTCGAGTATGTTTGGTTCTGAGCATAACAGCCCTACCATTCCAAGTAACCCTGCTTTCTTGATTGAGAATGTTCACAATTACAACTATTCAATGACTGACCTGGGATCTGTTTATCCATTGTATTATGGAATTCGTTTTCGAACTGAAGAGCCGAACGTAGGCTCCCGGTGTTCTGTAGATGCCAACCAACAGACGATATTTTTGGGTAGACCGGTCGTGTCGAGTGCAGAGCCTGCTGAGCTTAGTCTTTGCGCTCGTAAAACTGGAAATGCTATGAGCAGATTCCCATCAGAAGTTATCACAGACACAGAATGTGATTTATCTTTGAGGTTGGGAGTACCTTCCCAGCCATGTGTGAGTACTGGGAAGCCTTGGGCTTCTGAAACCGGAGACATTGGTTCAAGCAGTTCCCATGAGCGGAACAAGTTCCACGATCGACCCATTTACGCAACTAAAGAGTTCACTTTTTTCCCTAACAGAACTTCGTTCGATCCGTCTGGTTCCTGCTCGAATATGTGGAGCTCAGATTGGAGGGGTCAGAATCCAGAATCTTTCACGAAAAAGCGCAAAGAGCCCATTCGTAGCGACGAGGAGGACGAACCATTTTGTCTTCCACCCGAGGCTCCATCTAACTGGTTTGGCAGTCGAACGAAAAGGCCAGGTTTGTAG

Coding sequence (CDS)

ATGCCGCGGCCAGGCCCGAGACCGTATGAGTGCGTGCGGCGAGCTTGGCATAGTGATAGACATCAGCCGATGAGAGGTTCCATTATTCAGCAAATTTTCAGGTTCTGGGTCGTTTTAAACTTGGCTGATTCTCTTCGATTTGATTGTGTTTTTCTTGTTCTTGTTTTTGTGCATTTTGGTGAATTGCACACCATGTGTTTGATCAGAGTTGTCAATGAGAATCATAGCCCTGCTACTAAAAAGAACAAGGAATGGCAGGAGAAATTGCCGATTGTGGTTTTGAAAGCTGAAGAAATCATGTATTCTAAAGCTAATTCTGAGGTTGAGTACATGAATCTTGAGACAGTTTGGGAGCGTTTGAATGATGCTGTTAATACCATAATTCGAAGAGATGAACACAGTGAAACTGGTGAGCTTTTGCCTCCCTGTGTTGAAGCTGCACTAAACCTCGGCTGCGTTCCGGTACGAGCTTCTCGGAGCCAACGCCATACGAATCCCAGGACATATCTTACTCCAAGAACACAAGAACCATCTACTCTTGCTACCACATTGGATAAAGCCAGTGATGAAAGACCCCTACCGACGTCATTGTTGCGCCTGAGCAACCAGTTGAGTTTTCCACGAGCCACGGCTATGAACTCGAGTATGTTTGGTTCTGAGCATAACAGCCCTACCATTCCAAGTAACCCTGCTTTCTTGATTGAGAATGTTCACAATTACAACTATTCAATGACTGACCTGGGATCTGTTTATCCATTGTATTATGGAATTCGTTTTCGAACTGAAGAGCCGAACGTAGGCTCCCGGTGTTCTGTAGATGCCAACCAACAGACGATATTTTTGGGTAGACCGGTCGTGTCGAGTGCAGAGCCTGCTGAGCTTAGTCTTTGCGCTCGTAAAACTGGAAATGCTATGAGCAGATTCCCATCAGAAGTTATCACAGACACAGAATGTGATTTATCTTTGAGGTTGGGAGTACCTTCCCAGCCATGTGTGAGTACTGGGAAGCCTTGGGCTTCTGAAACCGGAGACATTGGTTCAAGCAGTTCCCATGAGCGGAACAAGTTCCACGATCGACCCATTTACGCAACTAAAGAGTTCACTTTTTTCCCTAACAGAACTTCGTTCGATCCGTCTGGTTCCTGCTCGAATATGTGGAGCTCAGATTGGAGGGGTCAGAATCCAGAATCTTTCACGAAAAAGCGCAAAGAGCCCATTCGTAGCGACGAGGAGGACGAACCATTTTGTCTTCCACCCGAGGCTCCATCTAACTGGTTTGGCAGTCGAACGAAAAGGCCAGGTTTGTAG

Protein sequence

MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVFVHFGELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERLNDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLTPRTQEPSTLATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHNYNYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCARKTGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDRPIYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPPEAPSNWFGSRTKRPGL

Homology

[Close]

BLAST of CmoCh12G012250 vs. ExPASy TrEMBL
Match: A0A6J1FCV2 (uncharacterized protein LOC111444465 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444465 PE=4 SV=1)

HSP 1 Score: 891.3 bits (2302), Expect = 1.6e-255
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0


Query: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVFVHFG 60
           MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVFVHFG
Sbjct: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVFVHFG 60

Query: 61  ELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERL 120
           ELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERL
Sbjct: 61  ELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERL 120

Query: 121 NDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLTPRTQEPSTL 180
           NDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLTPRTQEPSTL
Sbjct: 121 NDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLTPRTQEPSTL 180

Query: 181 ATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHNY 240
           ATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHNY
Sbjct: 181 ATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHNY 240

Query: 241 NYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCARK 300
           NYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCARK
Sbjct: 241 NYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCARK 300

Query: 301 TGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDRP 360
           TGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDRP
Sbjct: 301 TGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDRP 360

Query: 361 IYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPPE 420
           IYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPPE
Sbjct: 361 IYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPPE 420

Query: 421 APSNWFGSRTKRPGL 436
           APSNWFGSRTKRPGL
Sbjct: 421 APSNWFGSRTKRPGL 435

[Close]

BLAST of CmoCh12G012250 vs. ExPASy TrEMBL
Match: A0A6J1FDR6 (uncharacterized protein LOC111444465 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444465 PE=4 SV=1)

HSP 1 Score: 863.6 bits (2230), Expect = 3.5e-247
Identity = 426/435 (97.93%), Postives = 426/435 (97.93%), Query Frame = 0


Query: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVFVHFG 60
           MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVFVHFG
Sbjct: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVFVHFG 60

Query: 61  ELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERL 120
           ELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERL
Sbjct: 61  ELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERL 120

Query: 121 NDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLTPRTQEPSTL 180
           NDAVNTIIRRDEHSET         AALNLGCVPVRASRSQRHTNPRTYLTPRTQEPSTL
Sbjct: 121 NDAVNTIIRRDEHSET---------AALNLGCVPVRASRSQRHTNPRTYLTPRTQEPSTL 180

Query: 181 ATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHNY 240
           ATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHNY
Sbjct: 181 ATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHNY 240

Query: 241 NYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCARK 300
           NYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCARK
Sbjct: 241 NYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCARK 300

Query: 301 TGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDRP 360
           TGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDRP
Sbjct: 301 TGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDRP 360

Query: 361 IYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPPE 420
           IYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPPE
Sbjct: 361 IYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPPE 420

Query: 421 APSNWFGSRTKRPGL 436
           APSNWFGSRTKRPGL
Sbjct: 421 APSNWFGSRTKRPGL 426

[Close]

BLAST of CmoCh12G012250 vs. ExPASy TrEMBL
Match: A0A6J1HRU3 (uncharacterized protein LOC111465547 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465547 PE=4 SV=1)

HSP 1 Score: 851.7 bits (2199), Expect = 1.4e-243
Identity = 419/436 (96.10%), Postives = 424/436 (97.25%), Query Frame = 0


Query: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLV-FVHF 60
           MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLV FVHF
Sbjct: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVLFVHF 60

Query: 61  GELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWER 120
           GELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWER
Sbjct: 61  GELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWER 120

Query: 121 LNDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLTPRTQEPST 180
           LNDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRS+RH NPRTYLTPRTQEPST
Sbjct: 121 LNDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSRRHMNPRTYLTPRTQEPST 180

Query: 181 LATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHN 240
           LATTLDKA+DER LPTS LR SNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHN
Sbjct: 181 LATTLDKATDERRLPTSSLRPSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHN 240

Query: 241 YNYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCAR 300
           YNYSMTDLGSVYPLYYGIRFRTEEPN+GS CSVDANQQTIFLGRPVVSSAEPAELSLCAR
Sbjct: 241 YNYSMTDLGSVYPLYYGIRFRTEEPNLGSLCSVDANQQTIFLGRPVVSSAEPAELSLCAR 300

Query: 301 KTGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDR 360
           KTGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTG+PWASE GDIGSSSSHERNKFHDR
Sbjct: 301 KTGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGQPWASEAGDIGSSSSHERNKFHDR 360

Query: 361 PIYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPP 420
           PIYATKEF+FFPNRTSFDP GS SNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFC PP
Sbjct: 361 PIYATKEFSFFPNRTSFDPFGSFSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCFPP 420

Query: 421 EAPSNWFGSRTKRPGL 436
           EAPSNWF  RTKRPGL
Sbjct: 421 EAPSNWFDRRTKRPGL 436

[Close]

BLAST of CmoCh12G012250 vs. ExPASy TrEMBL
Match: A0A6J1HMI3 (uncharacterized protein LOC111465547 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465547 PE=4 SV=1)

HSP 1 Score: 823.9 bits (2127), Expect = 3.1e-235
Identity = 410/436 (94.04%), Postives = 415/436 (95.18%), Query Frame = 0


Query: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLV-FVHF 60
           MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLV FVHF
Sbjct: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVLFVHF 60

Query: 61  GELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWER 120
           GELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWER
Sbjct: 61  GELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWER 120

Query: 121 LNDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLTPRTQEPST 180
           LNDAVNTIIRRDEHSET         AALNLGCVPVRASRS+RH NPRTYLTPRTQEPST
Sbjct: 121 LNDAVNTIIRRDEHSET---------AALNLGCVPVRASRSRRHMNPRTYLTPRTQEPST 180

Query: 181 LATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHN 240
           LATTLDKA+DER LPTS LR SNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHN
Sbjct: 181 LATTLDKATDERRLPTSSLRPSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHN 240

Query: 241 YNYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCAR 300
           YNYSMTDLGSVYPLYYGIRFRTEEPN+GS CSVDANQQTIFLGRPVVSSAEPAELSLCAR
Sbjct: 241 YNYSMTDLGSVYPLYYGIRFRTEEPNLGSLCSVDANQQTIFLGRPVVSSAEPAELSLCAR 300

Query: 301 KTGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDR 360
           KTGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTG+PWASE GDIGSSSSHERNKFHDR
Sbjct: 301 KTGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGQPWASEAGDIGSSSSHERNKFHDR 360

Query: 361 PIYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPP 420
           PIYATKEF+FFPNRTSFDP GS SNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFC PP
Sbjct: 361 PIYATKEFSFFPNRTSFDPFGSFSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCFPP 420

Query: 421 EAPSNWFGSRTKRPGL 436
           EAPSNWF  RTKRPGL
Sbjct: 421 EAPSNWFDRRTKRPGL 427

[Close]

BLAST of CmoCh12G012250 vs. ExPASy TrEMBL
Match: A0A6J1FIL0 (uncharacterized protein LOC111444465 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111444465 PE=4 SV=1)

HSP 1 Score: 803.1 bits (2073), Expect = 5.6e-229
Identity = 400/435 (91.95%), Postives = 400/435 (91.95%), Query Frame = 0


Query: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVFVHFG 60
           MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIF                           
Sbjct: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIF--------------------------- 60

Query: 61  ELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERL 120
                   RVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERL
Sbjct: 61  --------RVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERL 120

Query: 121 NDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLTPRTQEPSTL 180
           NDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLTPRTQEPSTL
Sbjct: 121 NDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLTPRTQEPSTL 180

Query: 181 ATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHNY 240
           ATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHNY
Sbjct: 181 ATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHNY 240

Query: 241 NYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCARK 300
           NYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCARK
Sbjct: 241 NYSMTDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRPVVSSAEPAELSLCARK 300

Query: 301 TGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDRP 360
           TGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDRP
Sbjct: 301 TGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGDIGSSSSHERNKFHDRP 360

Query: 361 IYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPPE 420
           IYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPPE
Sbjct: 361 IYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRKEPIRSDEEDEPFCLPPE 400

Query: 421 APSNWFGSRTKRPGL 436
           APSNWFGSRTKRPGL
Sbjct: 421 APSNWFGSRTKRPGL 400

[Close]

BLAST of CmoCh12G012250 vs. TAIR 10
Match: AT3G24150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32295.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 246.9 bits (629), Expect = 3.0e-65
Identity = 163/419 (38.90%), Postives = 217/419 (51.79%), Query Frame = 0


Query: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVFVHFG 60
           MPRPGPRPYECV+RAWHSDRHQP+RGSII+QIF                           
Sbjct: 1   MPRPGPRPYECVKRAWHSDRHQPIRGSIIRQIF--------------------------- 60

Query: 61  ELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERL 120
                   R+  E HS AT+KNKEWQEKLP+VVLKAEEIMYSKANSE EY + +T+W R+
Sbjct: 61  --------RLAMEAHSAATRKNKEWQEKLPVVVLKAEEIMYSKANSEEEYTDADTMWNRV 120

Query: 121 NDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLTPRTQEPSTL 180
           NDA++TIIRRDE +ETG LLPPCVEAALNLGC+ VRASRSQRH++ RTYL P+ QEP + 
Sbjct: 121 NDAIDTIIRRDESTETGPLLPPCVEAALNLGCIAVRASRSQRHSSGRTYLGPKIQEPVSA 180

Query: 181 ATTLDKASDERPLPTSLLRLSNQLSFPRATAMNSSMFGSEHNSPTIPSNPAFLIENVHNY 240
           +T  ++ S          + S + S     A+   +  + +     P    FL E++  +
Sbjct: 181 ST--NEPSYHHEYRQQAQQSSTKPSQTVQAAVPVDVLDNSNKRVATPRGYPFLHESMQMH 240

Query: 241 NYSM----------------TDLGSVYPLYYGIRFRTEEPNVGSRCSVDANQQTIFLGRP 300
              +                 +LGSVYPLYY    +T++ ++  R      +  I +G P
Sbjct: 241 QKPLAIRQGTGPASAPAPAPVNLGSVYPLYYEGNNQTQQADMSFR----VPEAPIIIGMP 300

Query: 301 VVSSAEPAELSLCARKTGNAMSRFPSEVITDTECDLSLRLGVPSQPCVSTGKPWASETGD 360
           +                       PSE  T+  CDLSLRLG+ S+P         S   D
Sbjct: 301 IGIK--------------------PSEEATERVCDLSLRLGISSEP---------STRID 336

Query: 361 IGSSSSHERNKFHDRPIYATKEFTFFPNRTSFDPSGSCSNMWSSDWRGQNPESFTKKRK 404
           +GSS ++      +  ++A  +         F+        W S+  GQN +S  KK +
Sbjct: 361 VGSSRAYPGRNQEELCLFAEVK-----KNDRFE--------WFSNSEGQNSDSRVKKHR 336

[Close]

BLAST of CmoCh12G012250 vs. TAIR 10
Match: AT4G32295.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-51
Identity = 100/171 (58.48%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 1   MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRFWVVLNLADSLRFDCVFLVLVFVHFG 60
           MPRPGPRPY+C+RRAWHSDRHQPMRG +IQ+IF                           
Sbjct: 1   MPRPGPRPYDCIRRAWHSDRHQPMRGLLIQEIF--------------------------- 60

Query: 61  ELHTMCLIRVVNENHSPATKKNKEWQEKLPIVVLKAEEIMYSKANSEVEYMNLETVWERL 120
                   R+V E HS +T+KN EWQEKLP+VVL+AEEIMYSKANSE EYM+++T+ +R 
Sbjct: 61  --------RIVCEIHSQSTRKNTEWQEKLPVVVLRAEEIMYSKANSEAEYMDMKTLLDRT 120

Query: 121 NDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASRSQRHTNPRTYLT 172
           NDA+NTIIR DE +ETGE L PC+EAAL+LGC P RASRSQR+ NPR YL+
Sbjct: 121 NDAINTIIRLDETTETGEFLQPCIEAALHLGCTPRRASRSQRNINPRCYLS 136

[Close]

BLAST of CmoCh12G012250 vs. TAIR 10
Match: AT4G32295.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 34 Blast hits to 34 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.1 bits (266), Expect = 3.7e-23
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 100 MYSKANSEVEYMNLETVWERLNDAVNTIIRRDEHSETGELLPPCVEAALNLGCVPVRASR 159
           MYSKANSE EYM+++T+ +R NDA+NTIIR DE +ETGE L PC+EAAL+LGC P RASR
Sbjct: 1   MYSKANSEAEYMDMKTLLDRTNDAINTIIRLDETTETGEFLQPCIEAALHLGCTPRRASR 60

Query: 160 SQRHTNPRTYLT 172
           SQR+ NPR YL+
Sbjct: 61  SQRNINPRCYLS 72

The following BLAST results are available for this feature:

BLAST of CmoCh12G012250 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh12G012250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCV2	1.6e-255	100.00	uncharacterized protein LOC111444465 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FDR6	3.5e-247	97.93	uncharacterized protein LOC111444465 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HRU3	1.4e-243	96.10	uncharacterized protein LOC111465547 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HMI3	3.1e-235	94.04	uncharacterized protein LOC111465547 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FIL0	5.6e-229	91.95	uncharacterized protein LOC111444465 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmoCh12G012250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24150.1	3.0e-65	38.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G32295.1	1.4e-51	58.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G32295.2	3.7e-23	69.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..354
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..435
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..188
None	No IPR available	PANTHER	PTHR35300:SF4	COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED	coord: 67..433 coord: 1..34
None	No IPR available	PANTHER	PTHR35300	COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED	coord: 67..433 coord: 1..34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G012250.1	CmoCh12G012250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003712	transcription coregulator activity