CmoCh12G011770 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G011770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	serine-rich protein-related
Location	Cmo_Chr12: 10652024 .. 10652626 (-)
RNA-Seq Expression	CmoCh12G011770
Synteny	CmoCh12G011770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCAACTTCTCGAAGATCGAACGGATCAGTTCTCCGATCGTTCTCACCGTCTGAAAGATTCTACGGTTACCGGAATTCATCTCCGTCGGCGTTCGCGTCGTCGACTTCCAGTTTCTCCTCTGGATCGGCAACTTCCTTTTTCTGCAGATCGACTTCGCCGTCGCGTGTGAAGGTTCACGGTTCGTCTTCAGTTTCCGTGCCGTCGGTGCGGTTTTATGTTGACCGTGCGATATCTCCGAACAGATCTGTGTCTGTTTCTTCTCGTGGCGGTGGGAAGAATCAAGTGGTGAAGAGGCAGAACAGTTCGAAGAGGACGTGTATGTGTTCTCCTACAACTCACCCTGGCTCGTTCCGGTGTAGCCTCCATAAAGGTATTATTTCGCAACCGCACGCGCCGTACTTGCCGAGTAGGTTGAATGCTCGTAGATCGGCTATGACGAATTCTCTGGTTAGAATCGGAGGTGTTGAAGGCGATCTTGTGAAGCGAGCTTTAGCGGCTTTGATTCGGCCTTCTTCTCATCAACAACGGCGCAGAGGCGATTTTAAGCCAAAGAGTAGCCGGCTCTCGATTATGTCCAAGGCCGTAGAAACATTATAA

mRNA sequence

ATGGCGGCAACTTCTCGAAGATCGAACGGATCAGTTCTCCGATCGTTCTCACCGTCTGAAAGATTCTACGGTTACCGGAATTCATCTCCGTCGGCGTTCGCGTCGTCGACTTCCAGTTTCTCCTCTGGATCGGCAACTTCCTTTTTCTGCAGATCGACTTCGCCGTCGCGTGTGAAGGTTCACGGTTCGTCTTCAGTTTCCGTGCCGTCGGTGCGGTTTTATGTTGACCGTGCGATATCTCCGAACAGATCTGTGTCTGTTTCTTCTCGTGGCGGTGGGAAGAATCAAGTGGTGAAGAGGCAGAACAGTTCGAAGAGGACGTGTATGTGTTCTCCTACAACTCACCCTGGCTCGTTCCGGTGTAGCCTCCATAAAGGTATTATTTCGCAACCGCACGCGCCGTACTTGCCGAGTAGGTTGAATGCTCGTAGATCGGCTATGACGAATTCTCTGGTTAGAATCGGAGGTGTTGAAGGCGATCTTGTGAAGCGAGCTTTAGCGGCTTTGATTCGGCCTTCTTCTCATCAACAACGGCGCAGAGGCGATTTTAAGCCAAAGAGTAGCCGGCTCTCGATTATGTCCAAGGCCGTAGAAACATTATAA

Coding sequence (CDS)

ATGGCGGCAACTTCTCGAAGATCGAACGGATCAGTTCTCCGATCGTTCTCACCGTCTGAAAGATTCTACGGTTACCGGAATTCATCTCCGTCGGCGTTCGCGTCGTCGACTTCCAGTTTCTCCTCTGGATCGGCAACTTCCTTTTTCTGCAGATCGACTTCGCCGTCGCGTGTGAAGGTTCACGGTTCGTCTTCAGTTTCCGTGCCGTCGGTGCGGTTTTATGTTGACCGTGCGATATCTCCGAACAGATCTGTGTCTGTTTCTTCTCGTGGCGGTGGGAAGAATCAAGTGGTGAAGAGGCAGAACAGTTCGAAGAGGACGTGTATGTGTTCTCCTACAACTCACCCTGGCTCGTTCCGGTGTAGCCTCCATAAAGGTATTATTTCGCAACCGCACGCGCCGTACTTGCCGAGTAGGTTGAATGCTCGTAGATCGGCTATGACGAATTCTCTGGTTAGAATCGGAGGTGTTGAAGGCGATCTTGTGAAGCGAGCTTTAGCGGCTTTGATTCGGCCTTCTTCTCATCAACAACGGCGCAGAGGCGATTTTAAGCCAAAGAGTAGCCGGCTCTCGATTATGTCCAAGGCCGTAGAAACATTATAA

Protein sequence

MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKVHGSSSVSVPSVRFYVDRAISPNRSVSVSSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSFRCSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRGDFKPKSSRLSIMSKAVETL

Homology

[Close]

BLAST of CmoCh12G011770 vs. ExPASy TrEMBL
Match: A0A6J1FCB9 (uncharacterized protein LOC111444107 OS=Cucurbita moschata OX=3662 GN=LOC111444107 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.6e-101
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60
           MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSFR 120
           HGSSSVSVPSVRFYVDRAISPNRSVSVSSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180
           CSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR
Sbjct: 121 CSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 GDFKPKSSRLSIMSKAVETL 201
           GDFKPKSSRLSIMSKAVETL
Sbjct: 181 GDFKPKSSRLSIMSKAVETL 200

[Close]

BLAST of CmoCh12G011770 vs. ExPASy TrEMBL
Match: A0A6J1HLP3 (uncharacterized protein LOC111465673 OS=Cucurbita maxima OX=3661 GN=LOC111465673 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.1e-98
Identity = 195/200 (97.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60
           MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSFR 120
           HGSSSVSVPSVRFYVDRAISPNRSVSVSSR  GKNQVVKRQ+SSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRSSGKNQVVKRQSSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180
           CSLHKGIISQPHAPY PSRL+ARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR
Sbjct: 121 CSLHKGIISQPHAPYSPSRLSARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 GDFKPKSSRLSIMSKAVETL 201
           GDFKPKSSRLSIMSKAVETL
Sbjct: 181 GDFKPKSSRLSIMSKAVETL 200

[Close]

BLAST of CmoCh12G011770 vs. ExPASy TrEMBL
Match: A0A5A7V7K3 (Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00990 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.1e-81
Identity = 173/201 (86.07%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60
           MAATSRRS+ SVLRS SPS RFYG+R SS SAFASSTS+FSS SATSFFCRSTSPSRV +
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSSSVSVPSVRFYVDRAISPNRSVSV-SSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSF 120
           HGS SVSVPSVRF +DRA SPNRSVSV SSR GG N+VV+RQ+SSKRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKGIISQP A Y PSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RGDFKPKSSRLSIMSKAVETL 201
           R DF+PK SRLSIMSKA ETL
Sbjct: 181 RVDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of CmoCh12G011770 vs. ExPASy TrEMBL
Match: A0A1S4E2K6 (uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.1e-81
Identity = 173/201 (86.07%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60
           MAATSRRS+ SVLRS SPS RFYG+R SS SAFASSTS+FSS SATSFFCRSTSPSRV +
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSS-RGGGKNQVVKRQNSSKRTCMCSPTTHPGSF 120
           HGS SVSVPSVRF +DRA SPNRSVSVSS R GG N+VV+RQ+SSKRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSPRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKGIISQP A Y PSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RGDFKPKSSRLSIMSKAVETL 201
           R DF+PK SRLSIMSKA ETL
Sbjct: 181 RVDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of CmoCh12G011770 vs. ExPASy TrEMBL
Match: A0A0A0LL69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.9e-81
Identity = 172/201 (85.57%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60
           MAATSRRS+ SVLRS SPS RFYG+R SS SAFASSTS+FSS SATSFFCRSTSPSRV +
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSSSVSVPSVRFYVDRAISPNRSVSV-SSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSF 120
           HGS SVSVPSVRF +DRA SPNRSVSV SSR GG N+VV+RQ+S+KRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSTKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKGIISQP A Y PSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RGDFKPKSSRLSIMSKAVETL 201
           R DF+PK SRLSIMSKA ETL
Sbjct: 181 RVDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of CmoCh12G011770 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 165.2 bits (417), Expect = 5.3e-41
Identity = 118/223 (52.91%), Postives = 143/223 (64.13%), Query Frame = 0


Query: 1   MAATSRR--SNGSVLRSFSPSERFYG-----YRNSSPSAFASSTSSFSSGSATSFFC--- 60
           M  TS R  SNG VLRS SPS RF G       +SS SAFASSTSS  S  +++FF    
Sbjct: 1   MVTTSSRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHR 60

Query: 61  ---------RSTSPSRVKVHGSSSVSVPSVRFYVD-RAISP-NRSVSVSSRGGGKNQVVK 120
                    RS SP+RV ++ +  +S  S R+ +D R+ISP N+S+SVS     KNQ   
Sbjct: 61  HHESNHSHHRSASPTRVNLYTAQPMS-QSFRYSLDSRSISPTNKSISVS-----KNQPPS 120

Query: 121 RQNSSKRTCMCSPTTHPGSFRCSLHKGIISQPH----APYLPSRLNARRSAMTNSLVRIG 180
             +   R CMCSPTTHPGSFRCSLHK  ++ PH    A Y  + LN RRSAMTNSLVRIG
Sbjct: 121 HNHKISRRCMCSPTTHPGSFRCSLHKN-VANPHGQGTASYTTNGLNMRRSAMTNSLVRIG 180

Query: 181 GVEGDLVKRALAALIRPSSHQQRRRGDFKPKSSRLSIMSKAVE 199
           GVEG+ V+RAL  LIRPSSH  +RR  ++P+ SRLSIM+KA E
Sbjct: 181 GVEGEWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of CmoCh12G011770 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 164.9 bits (416), Expect = 6.9e-41
Identity = 118/222 (53.15%), Postives = 144/222 (64.86%), Query Frame = 0


Query: 1   MAATS---RRSNGSV-LRSFSPSERFYG-YRNSSPSA------FASSTSSFSSGSATSFF 60
           MA TS    RSNGS  LRS SPS RF G Y N  PS+      FASSTSS  S  +T+FF
Sbjct: 1   MAITSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFF 60

Query: 61  C----------RSTSPSRVKVHGSSSVSVPSVRFYVD-RAISPNRSVSVSSRGGGKNQVV 120
                      RS SP+RV +  S+ ++  S R+ +D R+ISPNRS++VSS     +  +
Sbjct: 61  SSHNQNNHHQHRSASPTRVNLFTSAPMT-QSFRYSIDNRSISPNRSIAVSSNKPSNHHKI 120

Query: 121 KRQNSSKRTCMCSPTTHPGSFRCSLHKGIISQPH----APYLPSRLNARRSAMTNSLVRI 180
                S+R CMCSPTTHPGSFRCSLHK  ++ PH    A Y  + LN RRSAMTNSLVRI
Sbjct: 121 P---DSRRRCMCSPTTHPGSFRCSLHKN-VANPHGQGTASYTTNGLNMRRSAMTNSLVRI 180

Query: 181 GGVEGDLVKRALAALIRPSSHQQRRRGDFKPKSSRLSIMSKA 197
           GGVEG+ V+RAL  LIRPSSHQ +RR  ++P+ SRL+ MSKA
Sbjct: 181 GGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKA 217

[Close]

BLAST of CmoCh12G011770 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 164.9 bits (416), Expect = 6.9e-41
Identity = 118/222 (53.15%), Postives = 144/222 (64.86%), Query Frame = 0


Query: 1   MAATS---RRSNGSV-LRSFSPSERFYG-YRNSSPSA------FASSTSSFSSGSATSFF 60
           MA TS    RSNGS  LRS SPS RF G Y N  PS+      FASSTSS  S  +T+FF
Sbjct: 1   MAITSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFF 60

Query: 61  C----------RSTSPSRVKVHGSSSVSVPSVRFYVD-RAISPNRSVSVSSRGGGKNQVV 120
                      RS SP+RV +  S+ ++  S R+ +D R+ISPNRS++VSS     +  +
Sbjct: 61  SSHNQNNHHQHRSASPTRVNLFTSAPMT-QSFRYSIDNRSISPNRSIAVSSNKPSNHHKI 120

Query: 121 KRQNSSKRTCMCSPTTHPGSFRCSLHKGIISQPH----APYLPSRLNARRSAMTNSLVRI 180
                S+R CMCSPTTHPGSFRCSLHK  ++ PH    A Y  + LN RRSAMTNSLVRI
Sbjct: 121 P---DSRRRCMCSPTTHPGSFRCSLHKN-VANPHGQGTASYTTNGLNMRRSAMTNSLVRI 180

Query: 181 GGVEGDLVKRALAALIRPSSHQQRRRGDFKPKSSRLSIMSKA 197
           GGVEG+ V+RAL  LIRPSSHQ +RR  ++P+ SRL+ MSKA
Sbjct: 181 GGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKA 217

[Close]

BLAST of CmoCh12G011770 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 79.0 bits (193), Expect = 5.0e-15
Identity = 71/211 (33.65%), Postives = 95/211 (45.02%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSFSPSERFYG-----YRNSSPSAFASSTSSFSSGSATSFFCRSTSP 60
           MAAT  RS+ SVLR  S S+R +      +R  SPS                  C     
Sbjct: 1   MAATG-RSSRSVLRPLSSSQRLHNNHHHHHRQRSPSP-----------------CNKNLN 60

Query: 61  SRVKVHGSSSVSVPSVRFYVDRAISPNRSVSVSSRGGGKNQVVKRQNSSKRTCMCSPTTH 120
            R+K +   S+  PSV             V+VSS            + +KR C+CSPTTH
Sbjct: 61  LRLKFYSPGSIPKPSV-------------VTVSS-----------NHQTKRKCLCSPTTH 120

Query: 121 PGSFRCSLHKGIISQPHAPYLPSR----------------LNARRSAMTNSLVRIGGVEG 180
           PGSFRCS H+ +  +       S                 LN R+ A+ NSL +IG VE 
Sbjct: 121 PGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLAKIGSVEA 169

Query: 181 DLVKRALAA-LIRPSSHQQRRRGDFKPKSSR 190
           +  +R+LAA L +PSS    RR +F+P+ SR
Sbjct: 181 ERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of CmoCh12G011770 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 5.5e-06
Identity = 25/50 (50.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 82  NRSVSVSSRGGGKNQVVKRQNS-SKRTCMCSPTTHPGSFRCSLHKGIISQ 131
           N +V V SRG      + RQ S +K  C+CSPTTHPGSFRC +H+ +  Q
Sbjct: 23  NSAVEVGSRG------LSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQ 66

The following BLAST results are available for this feature:

BLAST of CmoCh12G011770 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh12G011770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCB9	4.6e-101	100.00	uncharacterized protein LOC111444107 OS=Cucurbita moschata OX=3662 GN=LOC1114441...	[more]
A0A6J1HLP3	8.1e-98	97.50	uncharacterized protein LOC111465673 OS=Cucurbita maxima OX=3661 GN=LOC111465673...	[more]
A0A5A7V7K3	3.1e-81	86.07	Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX...	[more]
A0A1S4E2K6	3.1e-81	86.07	uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=...	[more]
A0A0A0LL69	6.9e-81	85.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1	[more]

BLAST of CmoCh12G011770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	5.3e-41	52.91	serine-rich protein-related	[more]
AT5G25280.1	6.9e-41	53.15	serine-rich protein-related	[more]
AT5G25280.2	6.9e-41	53.15	serine-rich protein-related	[more]
AT5G20370.1	5.0e-15	33.65	serine-rich protein-related	[more]
AT1G67910.1	5.5e-06	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33132:SF75	SUBFAMILY NOT NAMED	coord: 1..196
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 1..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011770.1	CmoCh12G011770.1	mRNA