CmoCh12G011630 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G011630
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	F-box protein
Location	Cmo_Chr12: 10527493 .. 10528695 (-)
RNA-Seq Expression	CmoCh12G011630
Synteny	CmoCh12G011630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAGTGATAGTATTCATTCAGCTCTGGCATGTGATGACATCCTCACCGAAATCCTCCTTCGTTTACCGGAGAAACATGTTTTCAAATTTATACTCGTGTCGAAAAAATGGCTATACCTGATCTGTGATTTACCTTTCCGACGTTGTTACGAGATGCAATGGGGCACACACACTCGTCTTTTTGGCTTTTTTGTATGCAATCTTCTTTACATTGACAGACCACAAGGCGGGTTGAGGCGCCCACGGTACGAGCCTGCTCTACCTCTACTTTCAACATGTAAAGAAGGTGATGATTTAATGTCATCTGGATTCTTAAGGAAGCTAGGCTATTTTATTGACTACTCTGATGGCCTTGTGCTCTGTGGCCGACATCCTAAGAATTATTATGTCTGGAATTCTGTCACGAAGTATCGATGCCTTCTTCCTCAACCTCGAAAGCATTATAAATGTCTATGTATCGCGTTCATCACTGAAAACCGTGGTGAAGCTGACGGAGATATGGTATATAGAATCGTTCGGGCGAGCTGTGAATGCAAAGTTGATGTTATTAACACCATCTCTATAGAGACTTTCTCCTCAATGACTTGGACATGGAAGCAATCAACTCTTGTTTGTTCTTCAGATTTTTCTTTGAGTCCATGGACGGTGGGAACCGTGATCGACCAAGTTATATACTGGTTCGGAACGTATCGAAGCTTAGCCATTTATGATCCGGGATTCAGAGAAAGGAGCATAAACTCGATCAAGCTACCGGTTGGTCAGCTGACTTATGACTATGAGGACTCCATTTTAGGTGAGTCATCTGATGGGCTTTTGCAGTATGGTCAAAGTGGAAAGATGGGGTTGGAGATATGGATTCTGTACAAGGAGCAAGCTACCGTTACCGATCGATACGAGTACCGGTGGACGTTACGACACAGACTGAGCAGCAAAGAGATGTCCAAACATAACCCGAATTCAGGTATTCGTACTAAAGAACCTCAAGTATTATCGTTCATATATCGAAACCCGGAATCTGTTTTCATTCGATTGGGATCGAACATCTACCTTTGTAATATCAGAAGCAAAACACTGGCTGTGATTCCTTACCACTGTGATGGTGTATCTATCCCATGGGATTCTTGTAAAGTGGTGCCTTACTTTCAGAAGATATGGCCTTATTCCCCTTTCCCTGACCCCTCGAACACTTTTAATAATTGA

mRNA sequence

ATGGTTAGTGATAGTATTCATTCAGCTCTGGCATGTGATGACATCCTCACCGAAATCCTCCTTCGTTTACCGGAGAAACATGTTTTCAAATTTATACTCGTGTCGAAAAAATGGCTATACCTGATCTGTGATTTACCTTTCCGACGTTGTTACGAGATGCAATGGGGCACACACACTCGTCTTTTTGGCTTTTTTGTATGCAATCTTCTTTACATTGACAGACCACAAGGCGGGTTGAGGCGCCCACGGTACGAGCCTGCTCTACCTCTACTTTCAACATGTAAAGAAGGTGATGATTTAATGTCATCTGGATTCTTAAGGAAGCTAGGCTATTTTATTGACTACTCTGATGGCCTTGTGCTCTGTGGCCGACATCCTAAGAATTATTATGTCTGGAATTCTGTCACGAAGTATCGATGCCTTCTTCCTCAACCTCGAAAGCATTATAAATGTCTATGTATCGCGTTCATCACTGAAAACCGTGGTGAAGCTGACGGAGATATGGTATATAGAATCGTTCGGGCGAGCTGTGAATGCAAAGTTGATGTTATTAACACCATCTCTATAGAGACTTTCTCCTCAATGACTTGGACATGGAAGCAATCAACTCTTGTTTGTTCTTCAGATTTTTCTTTGAGTCCATGGACGGTGGGAACCGTGATCGACCAAGTTATATACTGGTTCGGAACGTATCGAAGCTTAGCCATTTATGATCCGGGATTCAGAGAAAGGAGCATAAACTCGATCAAGCTACCGGTTGGTCAGCTGACTTATGACTATGAGGACTCCATTTTAGGTGAGTCATCTGATGGGCTTTTGCAGTATGGTCAAAGTGGAAAGATGGGGTTGGAGATATGGATTCTGTACAAGGAGCAAGCTACCGTTACCGATCGATACGAGTACCGGTGGACGTTACGACACAGACTGAGCAGCAAAGAGATGTCCAAACATAACCCGAATTCAGGTATTCGTACTAAAGAACCTCAAGTATTATCGTTCATATATCGAAACCCGGAATCTGTTTTCATTCGATTGGGATCGAACATCTACCTTTGTAATATCAGAAGCAAAACACTGGCTGTGATTCCTTACCACTGTGATGGTGTATCTATCCCATGGGATTCTTGTAAAGTGGTGCCTTACTTTCAGAAGATATGGCCTTATTCCCCTTTCCCTGACCCCTCGAACACTTTTAATAATTGA

Coding sequence (CDS)

ATGGTTAGTGATAGTATTCATTCAGCTCTGGCATGTGATGACATCCTCACCGAAATCCTCCTTCGTTTACCGGAGAAACATGTTTTCAAATTTATACTCGTGTCGAAAAAATGGCTATACCTGATCTGTGATTTACCTTTCCGACGTTGTTACGAGATGCAATGGGGCACACACACTCGTCTTTTTGGCTTTTTTGTATGCAATCTTCTTTACATTGACAGACCACAAGGCGGGTTGAGGCGCCCACGGTACGAGCCTGCTCTACCTCTACTTTCAACATGTAAAGAAGGTGATGATTTAATGTCATCTGGATTCTTAAGGAAGCTAGGCTATTTTATTGACTACTCTGATGGCCTTGTGCTCTGTGGCCGACATCCTAAGAATTATTATGTCTGGAATTCTGTCACGAAGTATCGATGCCTTCTTCCTCAACCTCGAAAGCATTATAAATGTCTATGTATCGCGTTCATCACTGAAAACCGTGGTGAAGCTGACGGAGATATGGTATATAGAATCGTTCGGGCGAGCTGTGAATGCAAAGTTGATGTTATTAACACCATCTCTATAGAGACTTTCTCCTCAATGACTTGGACATGGAAGCAATCAACTCTTGTTTGTTCTTCAGATTTTTCTTTGAGTCCATGGACGGTGGGAACCGTGATCGACCAAGTTATATACTGGTTCGGAACGTATCGAAGCTTAGCCATTTATGATCCGGGATTCAGAGAAAGGAGCATAAACTCGATCAAGCTACCGGTTGGTCAGCTGACTTATGACTATGAGGACTCCATTTTAGGTGAGTCATCTGATGGGCTTTTGCAGTATGGTCAAAGTGGAAAGATGGGGTTGGAGATATGGATTCTGTACAAGGAGCAAGCTACCGTTACCGATCGATACGAGTACCGGTGGACGTTACGACACAGACTGAGCAGCAAAGAGATGTCCAAACATAACCCGAATTCAGGTATTCGTACTAAAGAACCTCAAGTATTATCGTTCATATATCGAAACCCGGAATCTGTTTTCATTCGATTGGGATCGAACATCTACCTTTGTAATATCAGAAGCAAAACACTGGCTGTGATTCCTTACCACTGTGATGGTGTATCTATCCCATGGGATTCTTGTAAAGTGGTGCCTTACTTTCAGAAGATATGGCCTTATTCCCCTTTCCCTGACCCCTCGAACACTTTTAATAATTGA

Protein sequence

MVSDSIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWTLRHRLSSKEMSKHNPNSGIRTKEPQVLSFIYRNPESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIPWDSCKVVPYFQKIWPYSPFPDPSNTFNN

Homology

[Close]

BLAST of CmoCh12G011630 vs. ExPASy Swiss-Prot
Match: Q94A64 (F-box protein At5g03970 OS=Arabidopsis thaliana OX=3702 GN=At5g03970 PE=2 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.2e-86
Identity = 167/390 (42.82%), Postives = 233/390 (59.74%), Query Frame = 0


Query: 5   SIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGF 64
           S H  L  +D + EIL+ LP + ++K ILVSK+WL +I    FR  Y  +W  +  L GF
Sbjct: 18  STHEVLNSNDTMCEILILLPPETIYKLILVSKRWLEIIASPCFRHTYLAKWKPNFELIGF 77

Query: 65  FVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGR 124
           FVC+ +Y+ R   G RRPR EP+LPLLST   GD++ SSG L+KLGY+ID +DGL+LCGR
Sbjct: 78  FVCSSMYLGRRIDGTRRPRAEPSLPLLSTSSIGDEIESSGILKKLGYYIDSADGLLLCGR 137

Query: 125 HPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVI 184
           HPK YY+W+  T+ +  LP+PR H++ LC++ I+E+    D    Y++VRA C       
Sbjct: 138 HPKAYYLWDPSTQKQQQLPRPRVHFEELCMSLISED--SPDQGFSYKVVRAECVAFPVNS 197

Query: 185 NTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRER 244
             + +ETFSS T TW  S L+C    SLSPWT G VI  V+YW      +AIYD    E+
Sbjct: 198 TKVKVETFSSKTSTWSYSELICLEPLSLSPWTPGRVIKGVVYWHARGGKIAIYDSNSEEK 257

Query: 245 SINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWT 304
            I+ IKLP    TYDY++ +LGE+ DG LQYG S K  +E+W L K    +       W 
Sbjct: 258 RIDVIKLP---KTYDYDEQVLGETDDGSLQYGWSNKSVMEVWKLEKVGNVL------EWN 317

Query: 305 LRHRLSSKEMSKHNPNSGIR----TKEPQVLSFIYRNPESVFIRLGSNIYLCNIRSKTLA 364
           L  +++ K M K N     R    TKE Q+L+   +  + V+IR  + I++ +  +K + 
Sbjct: 318 LLFKVNFKAMWKMNQAVATRFSTWTKETQLLALFNQKSDLVYIRCDTQIFIYHTETKRVE 377

Query: 365 VIPYHCDGVSIPWDSCKVVPYFQKIWPYSP 391
           V+ Y     ++ WD  KVVPYF++ WP SP
Sbjct: 378 VVQYQGRKSTLVWDFNKVVPYFRRTWPCSP 396

[Close]

BLAST of CmoCh12G011630 vs. ExPASy Swiss-Prot
Match: Q9FZF8 (Putative F-box protein At1g47790 OS=Arabidopsis thaliana OX=3702 GN=At1g47790 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.8e-05
Identity = 76/306 (24.84%), Postives = 123/306 (40.20%), Query Frame = 0


Query: 14  DILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGT-HTRLFGFFVCNLLYI 73
           D+ +EILLRLP K V +F  VSK W  +I D  F + YE Q  T  + LF F   + L++
Sbjct: 28  DLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLLFCFKQSDKLFV 87

Query: 74  DRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGY--FIDYSDGLVLCGRHPKNYY 133
                 + +  Y+      S+ +   D       ++  Y    +   GL+ C        
Sbjct: 88  ----FSIPKHHYDSN----SSSQAAIDRFQVKLPQEFSYPSPTESVHGLI-CFHVLATVI 147

Query: 134 VWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASC-ECKVDVINTISI 193
           VWN   +    LP+PRK +K L + F+  +  E    +V      +C EC+V        
Sbjct: 148 VWNPSMRQFLTLPKPRKSWKELTV-FLGYDPIEGKHKVVCLPRNRTCDECQV-------- 207

Query: 194 ETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTY---RSLAIYDPGFRERSI 253
            T  S   +W+  T+        +  T G  I  V+Y+       R   I     +    
Sbjct: 208 LTLGSAQKSWR--TVKTKHKHRSTNDTWGRCIKGVVYYIAYVYHTRVWCIMSFHVKSEKF 267

Query: 254 NSIKLPVGQLTYDYEDSILGESS--DGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWT 311
           + IKLP+  +  D   +  G  +  D L         G+ +WIL        D  +++W+
Sbjct: 268 DMIKLPLENIYRDVMINYEGRLACVDKLYTLNND---GIRLWIL-------EDAEKHKWS 303

[Close]

BLAST of CmoCh12G011630 vs. ExPASy Swiss-Prot
Match: Q9FLS0 (F-box protein At5g07610 OS=Arabidopsis thaliana OX=3702 GN=At5g07610 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 3.1e-05
Identity = 66/279 (23.66%), Postives = 106/279 (37.99%), Query Frame = 0


Query: 13  DDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYI 72
           DD+L +IL  LP K + +F  VSK+WL LI +  F     ++      + GFF+ +   I
Sbjct: 35  DDVLIQILSFLPIKTLLRFKRVSKRWLSLITNPVFSN-RVIKSNHPLPISGFFLHSPREI 94

Query: 73  DRPQGGL----RRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLC------ 132
                 L       R   +LPL  T  + D ++           +  ++GL+LC      
Sbjct: 95  KYSFVSLDDDATNQRISSSLPLWFTDHQTDMII-----------MQSTNGLLLCKCSCAS 154

Query: 133 -GRHPKNYYVWNSVTKYRCLL--------------PQPRKHYKCLCIAFITENRGEADGD 192
                 NYYV+N  TK   LL              P    HYK  C+   + N   +  D
Sbjct: 155 SNHFNTNYYVYNPTTKQYTLLHQIAGHIALSLAFDPSRSPHYKVFCLRGRSNNSFSSASD 214

Query: 193 MVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYW 252
                                IE +SS    W++   V +S  +   ++     +  + W
Sbjct: 215 S----------------ELYHIEVYSSNEGLWRRVVPVPTSPSTFIEFSYSVFWNGAVNW 274

Query: 253 FG-TYRSLAIYDPGFRERSINSIKLPVGQLTYDYEDSIL 266
           +G + R    +D   +E  I  + LP     +++ED  L
Sbjct: 275 YGFSSRDCLSFDINTQE--IKILPLP----DHEHEDEPL 279

[Close]

BLAST of CmoCh12G011630 vs. ExPASy TrEMBL
Match: A0A6J1FCK9 (F-box protein At5g03970-like OS=Cucurbita moschata OX=3662 GN=LOC111444168 PE=4 SV=1)

HSP 1 Score: 850.1 bits (2195), Expect = 3.7e-243
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0


Query: 1   MVSDSIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTR 60
           MVSDSIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTR
Sbjct: 37  MVSDSIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTR 96

Query: 61  LFGFFVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLV 120
           LFGFFVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLV
Sbjct: 97  LFGFFVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLV 156

Query: 121 LCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECK 180
           LCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECK
Sbjct: 157 LCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECK 216

Query: 181 VDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPG 240
           VDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPG
Sbjct: 217 VDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPG 276

Query: 241 FRERSINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYE 300
           FRERSINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYE
Sbjct: 277 FRERSINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYE 336

Query: 301 YRWTLRHRLSSKEMSKHNPNSGIRTKEPQVLSFIYRNPESVFIRLGSNIYLCNIRSKTLA 360
           YRWTLRHRLSSKEMSKHNPNSGIRTKEPQVLSFIYRNPESVFIRLGSNIYLCNIRSKTLA
Sbjct: 337 YRWTLRHRLSSKEMSKHNPNSGIRTKEPQVLSFIYRNPESVFIRLGSNIYLCNIRSKTLA 396

Query: 361 VIPYHCDGVSIPWDSCKVVPYFQKIWPYSPFPDPSNTFNN 401
           VIPYHCDGVSIPWDSCKVVPYFQKIWPYSPFPDPSNTFNN
Sbjct: 397 VIPYHCDGVSIPWDSCKVVPYFQKIWPYSPFPDPSNTFNN 436

[Close]

BLAST of CmoCh12G011630 vs. ExPASy TrEMBL
Match: A0A6J1HRU8 (F-box protein At5g03970-like OS=Cucurbita maxima OX=3661 GN=LOC111465548 PE=4 SV=1)

HSP 1 Score: 818.5 bits (2113), Expect = 1.2e-233
Identity = 386/400 (96.50%), Postives = 390/400 (97.50%), Query Frame = 0


Query: 1   MVSDSIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTR 60
           MVSDSIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTH+R
Sbjct: 37  MVSDSIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHSR 96

Query: 61  LFGFFVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLV 120
           LFGFFVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLV
Sbjct: 97  LFGFFVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLV 156

Query: 121 LCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECK 180
           LCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITEN  EAD DMVYRI+RASCECK
Sbjct: 157 LCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENHREADRDMVYRIIRASCECK 216

Query: 181 VDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPG 240
           VDVINTISIETFSS+TWTWKQSTLVCSSDFSLSPWTVGTVID+VIYWFGTYRSLAIYDPG
Sbjct: 217 VDVINTISIETFSSLTWTWKQSTLVCSSDFSLSPWTVGTVIDRVIYWFGTYRSLAIYDPG 276

Query: 241 FRERSINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYE 300
           F ERSINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWIL  EQA VTDRYE
Sbjct: 277 FGERSINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILLMEQAMVTDRYE 336

Query: 301 YRWTLRHRLSSKEMSKHNPNSGIRTKEPQVLSFIYRNPESVFIRLGSNIYLCNIRSKTLA 360
           YRWTLRHRLSSKEMSK NPNSGIRTKEPQVLSFIYRN ESVFIRLGSNIYLCNIRSKTLA
Sbjct: 337 YRWTLRHRLSSKEMSKQNPNSGIRTKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLA 396

Query: 361 VIPYHCDGVSIPWDSCKVVPYFQKIWPYSPFPDPSNTFNN 401
           VIPYHCDGVSIPWDSCKVVPYFQKIWPYSPFPDPSNT NN
Sbjct: 397 VIPYHCDGVSIPWDSCKVVPYFQKIWPYSPFPDPSNTLNN 436

[Close]

BLAST of CmoCh12G011630 vs. ExPASy TrEMBL
Match: A0A6J1KIL3 (F-box protein At5g03970-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493566 PE=4 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 8.1e-190
Identity = 318/403 (78.91%), Postives = 351/403 (87.10%), Query Frame = 0


Query: 1   MVSDSIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTR 60
           M+ D+IHSALA DDIL EILLRLPEK+VFKFILVSK+WLYLIC+  FRRCYE QWG H+R
Sbjct: 40  MMKDNIHSALASDDILLEILLRLPEKYVFKFILVSKRWLYLICNFSFRRCYEKQWGAHSR 99

Query: 61  LFGFFVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLV 120
           LFGFFVCN LYIDRPQ G+RRPRYEPALPLLSTCKE DDLMSSG LRKLGYFIDYSDGL+
Sbjct: 100 LFGFFVCNFLYIDRPQDGVRRPRYEPALPLLSTCKESDDLMSSGILRKLGYFIDYSDGLL 159

Query: 121 LCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECK 180
           LCGRHPK+YYVW+SVTKYR  LPQP+KHYK LC AF+TE+  E  GD+VYR+VRA+CEC+
Sbjct: 160 LCGRHPKHYYVWDSVTKYRRQLPQPQKHYKYLCTAFMTEDPSEGRGDIVYRVVRANCECR 219

Query: 181 VDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPG 240
           VDVINTISIETFSS+TWTWKQSTLVCSS+F+LSPWTVGTVI  VI+WFGTYRSLAIYDPG
Sbjct: 220 VDVINTISIETFSSLTWTWKQSTLVCSSEFALSPWTVGTVIKGVIHWFGTYRSLAIYDPG 279

Query: 241 FRERSINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQ----ATVT 300
           F ER I SIKLPVGQLT+DYEDSILGESSD LLQYGQSGK GLE W+LYKEQ    +   
Sbjct: 280 FGERCITSIKLPVGQLTHDYEDSILGESSDRLLQYGQSGKHGLETWVLYKEQNNSLSPFD 339

Query: 301 DRYEYRWTLRHRLSSKEMSKHNPNSGIRTKEPQVLSFIYRNPESVFIRLGSNIYLCNIRS 360
            R EYRW LR +LS KE+ K NPNSGIR+KEPQ+LSFI RN +SVFIRLGSNIY CNIRS
Sbjct: 340 TRCEYRWKLRCKLSYKELWKQNPNSGIRSKEPQILSFIRRNSDSVFIRLGSNIYQCNIRS 399

Query: 361 KTLAVIPYHCDGVSIPWDSCKVVPYFQKIWPYSPFPDPSNTFN 400
           KTL VIPYHCD +SIPWD CKVVPYFQ+IWP+SP   P + FN
Sbjct: 400 KTLEVIPYHCDALSIPWDFCKVVPYFQRIWPHSPLQIPPDIFN 442

[Close]

BLAST of CmoCh12G011630 vs. ExPASy TrEMBL
Match: A0A6J1K9U9 (F-box protein At5g03970-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493566 PE=4 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 8.1e-190
Identity = 318/403 (78.91%), Postives = 351/403 (87.10%), Query Frame = 0


Query: 1   MVSDSIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTR 60
           M+ D+IHSALA DDIL EILLRLPEK+VFKFILVSK+WLYLIC+  FRRCYE QWG H+R
Sbjct: 49  MMKDNIHSALASDDILLEILLRLPEKYVFKFILVSKRWLYLICNFSFRRCYEKQWGAHSR 108

Query: 61  LFGFFVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLV 120
           LFGFFVCN LYIDRPQ G+RRPRYEPALPLLSTCKE DDLMSSG LRKLGYFIDYSDGL+
Sbjct: 109 LFGFFVCNFLYIDRPQDGVRRPRYEPALPLLSTCKESDDLMSSGILRKLGYFIDYSDGLL 168

Query: 121 LCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECK 180
           LCGRHPK+YYVW+SVTKYR  LPQP+KHYK LC AF+TE+  E  GD+VYR+VRA+CEC+
Sbjct: 169 LCGRHPKHYYVWDSVTKYRRQLPQPQKHYKYLCTAFMTEDPSEGRGDIVYRVVRANCECR 228

Query: 181 VDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPG 240
           VDVINTISIETFSS+TWTWKQSTLVCSS+F+LSPWTVGTVI  VI+WFGTYRSLAIYDPG
Sbjct: 229 VDVINTISIETFSSLTWTWKQSTLVCSSEFALSPWTVGTVIKGVIHWFGTYRSLAIYDPG 288

Query: 241 FRERSINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQ----ATVT 300
           F ER I SIKLPVGQLT+DYEDSILGESSD LLQYGQSGK GLE W+LYKEQ    +   
Sbjct: 289 FGERCITSIKLPVGQLTHDYEDSILGESSDRLLQYGQSGKHGLETWVLYKEQNNSLSPFD 348

Query: 301 DRYEYRWTLRHRLSSKEMSKHNPNSGIRTKEPQVLSFIYRNPESVFIRLGSNIYLCNIRS 360
            R EYRW LR +LS KE+ K NPNSGIR+KEPQ+LSFI RN +SVFIRLGSNIY CNIRS
Sbjct: 349 TRCEYRWKLRCKLSYKELWKQNPNSGIRSKEPQILSFIRRNSDSVFIRLGSNIYQCNIRS 408

Query: 361 KTLAVIPYHCDGVSIPWDSCKVVPYFQKIWPYSPFPDPSNTFN 400
           KTL VIPYHCD +SIPWD CKVVPYFQ+IWP+SP   P + FN
Sbjct: 409 KTLEVIPYHCDALSIPWDFCKVVPYFQRIWPHSPLQIPPDIFN 451

[Close]

BLAST of CmoCh12G011630 vs. ExPASy TrEMBL
Match: A0A6J1G549 (F-box protein At5g03970-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450857 PE=4 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 2.3e-189
Identity = 318/403 (78.91%), Postives = 349/403 (86.60%), Query Frame = 0


Query: 1   MVSDSIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTR 60
           M+ DSIHSALA DDIL EILLRLPEK VFKFILVSK+WLYLIC+  FRRCYE QWG H+R
Sbjct: 49  MMKDSIHSALASDDILLEILLRLPEKSVFKFILVSKRWLYLICNFSFRRCYEKQWGAHSR 108

Query: 61  LFGFFVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLV 120
           LFGFFVCN LYIDRPQ G+RRPRYEPALPLLSTCKE DDLMSSG LRKLGYFIDYSDGL+
Sbjct: 109 LFGFFVCNFLYIDRPQDGVRRPRYEPALPLLSTCKESDDLMSSGILRKLGYFIDYSDGLL 168

Query: 121 LCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECK 180
           LCGRHPK+YYVW+SVTKYR  LPQP+KHYK LC AF+TE+  E  GD+VYR+VRA+CEC+
Sbjct: 169 LCGRHPKHYYVWDSVTKYRRQLPQPQKHYKYLCTAFMTEDPSEGRGDIVYRVVRANCECR 228

Query: 181 VDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPG 240
           VDVINTISIETFSS+TWTWK STLVCSS+F+LSPWTVGTVI  VI+WFGTYRSLAIYDPG
Sbjct: 229 VDVINTISIETFSSLTWTWKPSTLVCSSEFALSPWTVGTVIKGVIHWFGTYRSLAIYDPG 288

Query: 241 FRERSINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQ----ATVT 300
           F ER I SIKLPVGQLT+DYEDSILGESSD LLQYGQSGK GLE W+LYKE     +   
Sbjct: 289 FGERRITSIKLPVGQLTHDYEDSILGESSDRLLQYGQSGKHGLETWVLYKEHDNSLSPFD 348

Query: 301 DRYEYRWTLRHRLSSKEMSKHNPNSGIRTKEPQVLSFIYRNPESVFIRLGSNIYLCNIRS 360
            R EYRW LR +LS KE+ K NPNSGIR+KEPQ+LSFI RN +SVFIRLGSNIY CNIRS
Sbjct: 349 TRCEYRWKLRCKLSYKELWKQNPNSGIRSKEPQILSFIRRNSDSVFIRLGSNIYQCNIRS 408

Query: 361 KTLAVIPYHCDGVSIPWDSCKVVPYFQKIWPYSPFPDPSNTFN 400
           KTL VIPYHCD +SIPWD CKVVPYFQKIWP+SP  +P + FN
Sbjct: 409 KTLEVIPYHCDALSIPWDFCKVVPYFQKIWPHSPLQNPPDIFN 451

[Close]

BLAST of CmoCh12G011630 vs. TAIR 10
Match: AT5G03970.1 (F-box associated ubiquitination effector family protein )

HSP 1 Score: 321.6 bits (823), Expect = 8.8e-88
Identity = 167/390 (42.82%), Postives = 233/390 (59.74%), Query Frame = 0


Query: 5   SIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGF 64
           S H  L  +D + EIL+ LP + ++K ILVSK+WL +I    FR  Y  +W  +  L GF
Sbjct: 18  STHEVLNSNDTMCEILILLPPETIYKLILVSKRWLEIIASPCFRHTYLAKWKPNFELIGF 77

Query: 65  FVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGR 124
           FVC+ +Y+ R   G RRPR EP+LPLLST   GD++ SSG L+KLGY+ID +DGL+LCGR
Sbjct: 78  FVCSSMYLGRRIDGTRRPRAEPSLPLLSTSSIGDEIESSGILKKLGYYIDSADGLLLCGR 137

Query: 125 HPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVI 184
           HPK YY+W+  T+ +  LP+PR H++ LC++ I+E+    D    Y++VRA C       
Sbjct: 138 HPKAYYLWDPSTQKQQQLPRPRVHFEELCMSLISED--SPDQGFSYKVVRAECVAFPVNS 197

Query: 185 NTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRER 244
             + +ETFSS T TW  S L+C    SLSPWT G VI  V+YW      +AIYD    E+
Sbjct: 198 TKVKVETFSSKTSTWSYSELICLEPLSLSPWTPGRVIKGVVYWHARGGKIAIYDSNSEEK 257

Query: 245 SINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWT 304
            I+ IKLP    TYDY++ +LGE+ DG LQYG S K  +E+W L K    +       W 
Sbjct: 258 RIDVIKLP---KTYDYDEQVLGETDDGSLQYGWSNKSVMEVWKLEKVGNVL------EWN 317

Query: 305 LRHRLSSKEMSKHNPNSGIR----TKEPQVLSFIYRNPESVFIRLGSNIYLCNIRSKTLA 364
           L  +++ K M K N     R    TKE Q+L+   +  + V+IR  + I++ +  +K + 
Sbjct: 318 LLFKVNFKAMWKMNQAVATRFSTWTKETQLLALFNQKSDLVYIRCDTQIFIYHTETKRVE 377

Query: 365 VIPYHCDGVSIPWDSCKVVPYFQKIWPYSP 391
           V+ Y     ++ WD  KVVPYF++ WP SP
Sbjct: 378 VVQYQGRKSTLVWDFNKVVPYFRRTWPCSP 396

[Close]

BLAST of CmoCh12G011630 vs. TAIR 10
Match: AT5G03970.2 (F-box associated ubiquitination effector family protein )

HSP 1 Score: 321.6 bits (823), Expect = 8.8e-88
Identity = 167/390 (42.82%), Postives = 233/390 (59.74%), Query Frame = 0


Query: 5   SIHSALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGF 64
           S H  L  +D + EIL+ LP + ++K ILVSK+WL +I    FR  Y  +W  +  L GF
Sbjct: 6   STHEVLNSNDTMCEILILLPPETIYKLILVSKRWLEIIASPCFRHTYLAKWKPNFELIGF 65

Query: 65  FVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGR 124
           FVC+ +Y+ R   G RRPR EP+LPLLST   GD++ SSG L+KLGY+ID +DGL+LCGR
Sbjct: 66  FVCSSMYLGRRIDGTRRPRAEPSLPLLSTSSIGDEIESSGILKKLGYYIDSADGLLLCGR 125

Query: 125 HPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVI 184
           HPK YY+W+  T+ +  LP+PR H++ LC++ I+E+    D    Y++VRA C       
Sbjct: 126 HPKAYYLWDPSTQKQQQLPRPRVHFEELCMSLISED--SPDQGFSYKVVRAECVAFPVNS 185

Query: 185 NTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRER 244
             + +ETFSS T TW  S L+C    SLSPWT G VI  V+YW      +AIYD    E+
Sbjct: 186 TKVKVETFSSKTSTWSYSELICLEPLSLSPWTPGRVIKGVVYWHARGGKIAIYDSNSEEK 245

Query: 245 SINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWT 304
            I+ IKLP    TYDY++ +LGE+ DG LQYG S K  +E+W L K    +       W 
Sbjct: 246 RIDVIKLP---KTYDYDEQVLGETDDGSLQYGWSNKSVMEVWKLEKVGNVL------EWN 305

Query: 305 LRHRLSSKEMSKHNPNSGIR----TKEPQVLSFIYRNPESVFIRLGSNIYLCNIRSKTLA 364
           L  +++ K M K N     R    TKE Q+L+   +  + V+IR  + I++ +  +K + 
Sbjct: 306 LLFKVNFKAMWKMNQAVATRFSTWTKETQLLALFNQKSDLVYIRCDTQIFIYHTETKRVE 365

Query: 365 VIPYHCDGVSIPWDSCKVVPYFQKIWPYSP 391
           V+ Y     ++ WD  KVVPYF++ WP SP
Sbjct: 366 VVQYQGRKSTLVWDFNKVVPYFRRTWPCSP 384

[Close]

BLAST of CmoCh12G011630 vs. TAIR 10
Match: AT1G47790.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-06
Identity = 76/306 (24.84%), Postives = 123/306 (40.20%), Query Frame = 0


Query: 14  DILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGT-HTRLFGFFVCNLLYI 73
           D+ +EILLRLP K V +F  VSK W  +I D  F + YE Q  T  + LF F   + L++
Sbjct: 28  DLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLLFCFKQSDKLFV 87

Query: 74  DRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGY--FIDYSDGLVLCGRHPKNYY 133
                 + +  Y+      S+ +   D       ++  Y    +   GL+ C        
Sbjct: 88  ----FSIPKHHYDSN----SSSQAAIDRFQVKLPQEFSYPSPTESVHGLI-CFHVLATVI 147

Query: 134 VWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASC-ECKVDVINTISI 193
           VWN   +    LP+PRK +K L + F+  +  E    +V      +C EC+V        
Sbjct: 148 VWNPSMRQFLTLPKPRKSWKELTV-FLGYDPIEGKHKVVCLPRNRTCDECQV-------- 207

Query: 194 ETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTY---RSLAIYDPGFRERSI 253
            T  S   +W+  T+        +  T G  I  V+Y+       R   I     +    
Sbjct: 208 LTLGSAQKSWR--TVKTKHKHRSTNDTWGRCIKGVVYYIAYVYHTRVWCIMSFHVKSEKF 267

Query: 254 NSIKLPVGQLTYDYEDSILGESS--DGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWT 311
           + IKLP+  +  D   +  G  +  D L         G+ +WIL        D  +++W+
Sbjct: 268 DMIKLPLENIYRDVMINYEGRLACVDKLYTLNND---GIRLWIL-------EDAEKHKWS 303

[Close]

BLAST of CmoCh12G011630 vs. TAIR 10
Match: AT5G07610.1 (F-box family protein )

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-06
Identity = 66/279 (23.66%), Postives = 106/279 (37.99%), Query Frame = 0


Query: 13  DDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYI 72
           DD+L +IL  LP K + +F  VSK+WL LI +  F     ++      + GFF+ +   I
Sbjct: 35  DDVLIQILSFLPIKTLLRFKRVSKRWLSLITNPVFSN-RVIKSNHPLPISGFFLHSPREI 94

Query: 73  DRPQGGL----RRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLC------ 132
                 L       R   +LPL  T  + D ++           +  ++GL+LC      
Sbjct: 95  KYSFVSLDDDATNQRISSSLPLWFTDHQTDMII-----------MQSTNGLLLCKCSCAS 154

Query: 133 -GRHPKNYYVWNSVTKYRCLL--------------PQPRKHYKCLCIAFITENRGEADGD 192
                 NYYV+N  TK   LL              P    HYK  C+   + N   +  D
Sbjct: 155 SNHFNTNYYVYNPTTKQYTLLHQIAGHIALSLAFDPSRSPHYKVFCLRGRSNNSFSSASD 214

Query: 193 MVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYW 252
                                IE +SS    W++   V +S  +   ++     +  + W
Sbjct: 215 S----------------ELYHIEVYSSNEGLWRRVVPVPTSPSTFIEFSYSVFWNGAVNW 274

Query: 253 FG-TYRSLAIYDPGFRERSINSIKLPVGQLTYDYEDSIL 266
           +G + R    +D   +E  I  + LP     +++ED  L
Sbjct: 275 YGFSSRDCLSFDINTQE--IKILPLP----DHEHEDEPL 279

[Close]

BLAST of CmoCh12G011630 vs. TAIR 10
Match: AT3G10240.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 43.9 bits (102), Expect = 3.5e-04
Identity = 67/286 (23.43%), Postives = 110/286 (38.46%), Query Frame = 0


Query: 14  DILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYI- 73
           D+++EILLRLPEK V +F  VSK W  +  +  F     +      RL   F  N  +  
Sbjct: 30  DLVSEILLRLPEKSVARFRCVSKPWSSITTEPYF---INLLTTRSPRLLLCFKANEKFFV 89

Query: 74  -DRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYF--IDYSDGLVLCGRHPKNY 133
              PQ    R  +E       +  +  D     F  ++ YF   +  +GL+ C +     
Sbjct: 90  SSIPQ---HRQTFE-TWNKSHSYSQLIDRYHMEFSEEMNYFPPTESVNGLI-CFQESARL 149

Query: 134 YVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISI 193
            VWN  T+   +LP+P  +   L I            D V    +  C       +T  +
Sbjct: 150 IVWNPSTRQLLILPKPNGNSNDLTIFL--------GYDPVEGKHKVMCMEFSATYDTCRV 209

Query: 194 ETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIY---DPGFRERSI 253
            T  S    W+  T+   +      +  G  I+ V+Y     + + ++       R    
Sbjct: 210 LTLGSAQKLWR--TVKTHNKHRSDYYDSGRCINGVVYHIAYVKDMCVWVLMSFDVRSEIF 269

Query: 254 NSIKLPVGQLTYDYEDSILGESSDGLLQYGQS--GKMGLEIWILYK 291
           + I+LP    + D    +L + +  L   G+    K G+ +WIL K
Sbjct: 270 DMIELP----SSDVHKDVLIDYNGRLACVGREIIEKNGIRLWILEK 293

The following BLAST results are available for this feature:

BLAST of CmoCh12G011630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A64	1.2e-86	42.82	F-box protein At5g03970 OS=Arabidopsis thaliana OX=3702 GN=At5g03970 PE=2 SV=1	[more]
Q9FZF8	1.8e-05	24.84	Putative F-box protein At1g47790 OS=Arabidopsis thaliana OX=3702 GN=At1g47790 PE...	[more]
Q9FLS0	3.1e-05	23.66	F-box protein At5g07610 OS=Arabidopsis thaliana OX=3702 GN=At5g07610 PE=2 SV=1	[more]

BLAST of CmoCh12G011630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCK9	3.7e-243	100.00	F-box protein At5g03970-like OS=Cucurbita moschata OX=3662 GN=LOC111444168 PE=4 ...	[more]
A0A6J1HRU8	1.2e-233	96.50	F-box protein At5g03970-like OS=Cucurbita maxima OX=3661 GN=LOC111465548 PE=4 SV...	[more]
A0A6J1KIL3	8.1e-190	78.91	F-box protein At5g03970-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493...	[more]
A0A6J1K9U9	8.1e-190	78.91	F-box protein At5g03970-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493...	[more]
A0A6J1G549	2.3e-189	78.91	F-box protein At5g03970-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of CmoCh12G011630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03970.1	8.8e-88	42.82	F-box associated ubiquitination effector family protein	[more]
AT5G03970.2	8.8e-88	42.82	F-box associated ubiquitination effector family protein	[more]
AT1G47790.1	1.3e-06	24.84	F-box and associated interaction domains-containing protein	[more]
AT5G07610.1	2.2e-06	23.66	F-box family protein	[more]
AT3G10240.1	3.5e-04	23.43	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 13..48 e-value: 1.3E-5 score: 24.9
None	No IPR available	PANTHER	PTHR31672:SF2	BNACNNG10540D PROTEIN	coord: 4..387
None	No IPR available	PANTHER	PTHR31672	BNACNNG10540D PROTEIN	coord: 4..387
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 13..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011630.1	CmoCh12G011630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding