CmoCh12G010110 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G010110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	UBX domain-containing protein 1-like
Location	Cmo_Chr12: 9458895 .. 9464284 (+)
RNA-Seq Expression	CmoCh12G010110
Synteny	CmoCh12G010110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGAACTGTATGTTAGCTTTATTTATCAGTCTTCTTCCATTCTCAATTTACAAATCCTCGTGCATCGTTCTTCAGCAAAAAGAAGCTACACTGTTCAAATCAAGCTGTGCTTCAATTTCTTGTACTGCTATCTACAGAGTTTGATTTTGATGGGATATTTTGTGTTGTGTTCATATCAGCTGTTTGTTCTTATGTTTCTCTTATTGCTGCTGGAATTTAGGAAGTTTAGGTGGAAAATCTATTGGGTTTCTTTGAATGCCAAAAACCCTTTTGGAATTTGAAGTTATAATGTGAATTTTTATTTGAAACTTGGATGATATTGGGTAGAACTGAAATTTTTCATTGAGATATTGGTTATTTAAGTTGTGAGATCCTACGTCGGTTGGGGAGGAGAATGAAACACTCTTTATAAGGGTGTGGGAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGTAAGGGAAAGCTCAAAGAGGACAATATCTGCTAGCGGTGGACTTCGGCCGTTACGAATGGTATCAGGGCTAGACACTGGGCGATGTGCTAGCAAAGAGGCTGAGCCCCAAGGGGTGGACATGAGGCAATGTGCCAGGAAGGACATGAGCCTCGAAGGGGGTGGATTTGGTGGGGGTCCCACATCAGTTGGAGAAAGGAATGAGGGCCAGCGAGGATGCTGGGACCCAAAGGGAGTGGATTGTGAGATCCCACATCGGTTGGGGAAGAGAACGAAACACTCTTTATAAGGGTGTGGTAACCTCTCTAGCCCCGAAGGGAGGTGGATTGTGAGATTCCACATCGGTTGGGGAGGAGAACGAAACACTCTTTATAAGGGTGTGAAAACCTCTCCCTAGCAGACGCGTTTCAAAAACCTTAAGGGGAAGTCTGAAAGGGAAAACCAAAGGAGACAATATCTGCTAGTGGTGTGTACTGTGAGATCTCACATCGGTTGAGGAGGAGAACAAAACACTCTTTACAAGGGTGTGGAAACCTCTCCCTACCAGACGCGTTTCAAAAATCTTAAGGGGAAGCCTGAAAGTGAAAACCCAAAGAAAACAATATCTATTAGTGGTGTGTTTGGGTCGTTACAGGATCTCTGGATGTATTGTTAATAACTAATGTTTTCTCTTAGGAGCATATATGATTTGGTAAATTTGTTGTTAATTGAAATTTGATATCTCTCGTAGGAATGGCTTTTCTGGAGGTAAAACAGAAACTCTTACGCAAGGTCGAATCTTTAGGATTCTCGAGGGCCCGAGCAGCCCGAGCACTTCATGTTACTGGTGAGAATGATTGATGACATTCGTAGCTCGAATATAACAATCATATGCAATGATTTGTTATTTGACAAAATATTTGAGTTATATTGATTACACTTCATGTCACAAGTTCTCAGATAAGTACTTTCTTTGTTCTTCAGGAAATGCCAGCTTTGAAGATGCGATCGATTGGATCGTTCATCACGAGAACGATCCGGATATTGATCAAGTGCCCCTGGTATAATTCTCTATTCATATAGACTTCTTCGGTTAGTTTTTAAGATAAATTGTAATTTAGATTACCTTGTTAATCAAATATCTCAAGGCAAAAACACTAGTTCGAGATTCGAATCACTCCACGAGCAAGATTGATCACATCAAGCTTGAATGATTCTACATAGAATTGCAAAGAAACTTAGCCATTGGTTGAAGCAAAGCACAAATGCTCCTTTTCCTACATTTTCCAAGTCCCTCTTTACAAAGATAACATACATGACTTTATATAGCTTCAAAATGAAAACCCTTAACTGTCCTGAGGCATTCCAAGAGTTGTAACCTTCGTACTTTTTTACCATAATTAGCCACTATGTAGATTACGTCTTAAAATACATTAAAGAAACACCATAACTCTAAATTACCATCCATAATACATTTGTAACCATCTAAGAATAAATGAAGCTCCACTTGAAGTACCTTGAAACATTTGTTGCATAAATGAAGCTTGATTCTTCTTAAGGTGACGTTAATATTGCATGATTAAGATGTCTGGGTTCATATCAAATGTTATGCAGGTAGCAATAGAGATCGATATCGAATCTCCCGAACCATTTCATATCACAGAGGAAACGAAAAAGAAAGCTAATGAATTAAGGTATGATGCCAGAATTTGTTCATTGTGAACTGCCATCATAAACTTAGAACTGTTTAATCGTCAGTTCCATCATATTAAATTCTTTGATAGTTCACTTAAATTCTTATTGATTTTTCTATGTTTAGGGATCAAATACTGAAAGAAAAGGAAAAGGAAGAAAAAGAGTTAGAAAAACGAAGGGAAAAGGTATCGCATTCGTTCGCGTTCGTTCGGGAAAGAACGAATTCTATCTTGATTTAGAATTTGATCTGTAAATTTGTATGCTCTCCAGTCTCCATGACAATATGTTTTGATTCTGTTTCCATGAAAATGAACTTTCATGATTTAGTGCTTTCGATATCTATAGGATCGAATTCGTTCGGGGAAAGAACTGCAAGAAGCGAAACGAATGGCAGAAGGAACTGAATGGAAACGGTGTGTTTTCTTGTTCAATCTTGTTTCTGACATCATTCTCTGACACATAAAATGTTGTAACTTTCTGTTTGGAGTGAAAGATTTGTTCTTATTTGCTCAGCTATAAAGATTCTAGACAAGCTGAGATAAAGGAGGAGAAAAAAGCAAAAGAAAAGGTTTTACAAGCACTAGAACAGAACAAGGTTTGCTTTCTCCTCCATTTTTTTATGTTCTAGTTTTTGTCGGATTTCTGTCTGGAAATTCTGTTCTTCATGCTGCTGCTGTTTACTGGTTGTTATTGTTCCTGCAATACAAGTGTCCTAGTATGAGATCCCACGTTGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAATCTCTCCCTAGCAGACGCGTTTTAAAACCTTGAGGGGAAGTCCAAAAGGGAAAGCCTTCAGAGGACAATATCTGTTAGCAGTGGACTTGGACTGTTACAAATGGTATCAGAGCCAGACATTAGGCGATGTGCTAGCGAAAAGGCTGAGCCCCCGAAGGGGGGTGGATTGGGAGGTTCACATCGATTTGAGAAGTGAACGAGTGCTAACGAGGACGCTAGGCCTTAAAGGGGGGTGGATTATGAGATCCCACATTCGTTGGGGAGGAGAACGAAACATTCTTTATAAAGGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGTTCAAAAGGGACACCCTTAAGAGGACAATATCTGCTAGCGGTGAGCTTGGGCGGTTACAAATGGTACTAGAGCCAGACACTAGGCGATGTACCAGTGAAGAGGTTGAGCCCCGAAGGGGGGTGGATTGGGGGGTTCACATCGATTTGAAAAGTGAACGAGTGCCAGTGAGGACGCTAGGTCTCAAAGAGGGGTGGATTGTGAGATCCCACATCGGTTGGGAGGAGAACGAAACATTTTTTATAAAGGTGTGGAAACCTCTCCCTAGCAGACTCGTTTTAACAACCTTGAAGGGAAGCCTAAAAGGGAGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTAGGCTTGAGCCGTTACAAATTGTATCAGAGCCAGACACCAGGCAATGTGCCAGCGAGGAGGTTGAACCTCGAAGGGGGGTGGACATGAGGCAGTGTGTCAGCAAGGACGCTAGGCCTTGAAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACACCCTTTATAAGAGTGTGAGAACCTCTCTCAAGAAGATGCGTTTTAAAATCCTCGAGGGGAACCTCGAAAGGGAAAGCTCAAAAAGGACAATATCTGCTAGCAGTGGGCTTGGGCTGTTACTCTTTTCCATTGTCGACTCGTATACATGAAATTGATTTCTATCTATGTTTTTCCGTTGTCGACTCGTATACGCGTCTGTACAGATAGAAAGAAAAAGGGATCTTGGAATGCCCTCTGAAGTAACTAGAAGCATTGCTGCTAAAGCCATCACAATTGGAGCACAGGAAAAGTATGAACATAAATCACAAAATTCAGGCTCAATGAGAGAATGTTTAAGGTCTCTTAGGCACAATCAAAAGGTAATGATATATGTGGAAAACGCTCGGGTCATTTACGTAGCATTCTTATGGAGCTTTACCGCTCATGATTCGAGCACAATGTCATGATTTCGGTATCGTCTCACCGTAAAATCCTTTGTCGATCCTTTGTTGTTTTTGTTACTCCTAATTGTTCTATTTGTGGATTCCAGGATGATCCTGAAAAAGTGAGAAATGCCTTCCAAACCCTCTTCACCTATGTTAGAAATGTAGCAAGAAATCCTGATGAGGAAAGGGTTCGGAAGATTCCGCTCGGTAATCCTTTGTTCCAGGTAAGTTTTCAAATCCAATATGTTGATTATGATACGAACGTCGTAGATATAACAGCGAGTAAGTTTCTACGAAAATGTATATATCATTCACCAATGAGGCCCAGAAGTTTCTTATAGTGCTTAGTGTCACAATCGCACTCTTGCTATAGCAGGACAGTGATTGTGCGACACTTGTTCTAACCAAGCGAACAAGTCAGCCCTGAGAAATTCGGACATCGCGGACAACGTTATATGACTATAAGCAAATAAAGAAATACGACGGCTTAAATAACATTTAATTCAGGGTAGGAAGAAGTGACAACTAGTCATATCTCCCTATAGTACATTTTGGGGCATTTTAGCTCTGATAGGTGTAGATATGGTTTTGATGAACGGTCATACACCTCCGTATTGACCCATGAAATGGTAAAGACCTATGTAGGATGAAAGCATGTAAAAAGGGGTTTGGAACGGGCATGCAACCAGGACATCACGTCTTGGTCAAGCAAGACCGGGACATCCATCATGTAGCCATAGGCAACACGTCTCCCTTCCTTATTGCAAATTAAGCTTTATGAAAATTTAAGCATGAGATCCAACTAAATGTTCATATTTCAACAGGAAAGAGTTGGGAGTTTGAAAGAAGGGATCGAGTTTCTCGAGCTTTGTGGCTTTCAGAGAGACGGAGACTTTCTCTACCTTCCTCGTGACAAGGTCGACCGGGACGTTTTAGTCACGGCTGGATTGTTATTGGAATCTGCAATGACAAATCCCTTTTTTGGCATTCTATGATCAACTTTGGTTTATTGAATTTGTCCAAAACCAGAAAGAGAAGGCACATAGCCTTCTTGCTTTGGGATTTGGACTTGTACTTAAGAACTCTGTGCTTTGTAGAATTACTTTCTCAAATGATTGTGTGATATCAGTGGTGATTTGAATGCATAAAATGAAGCCTTTTGGCTGAATCTTTCTGCTATGCTTATGAGAGTTCCTTGAA

mRNA sequence

GGTGAACTGTATGTTAGCTTTATTTATCAGTCTTCTTCCATTCTCAATTTACAAATCCTCGTGCATCGTTCTTCAGCAAAAAGAAGCTACACTGTTCAAATCAAGCTGTGCTTCAATTTCTTGAATGGCTTTTCTGGAGGTAAAACAGAAACTCTTACGCAAGGTCGAATCTTTAGGATTCTCGAGGGCCCGAGCAGCCCGAGCACTTCATGTTACTGGAAATGCCAGCTTTGAAGATGCGATCGATTGGATCGTTCATCACGAGAACGATCCGGATATTGATCAAGTGCCCCTGGTAGCAATAGAGATCGATATCGAATCTCCCGAACCATTTCATATCACAGAGGAAACGAAAAAGAAAGCTAATGAATTAAGGGATCAAATACTGAAAGAAAAGGAAAAGGAAGAAAAAGAGTTAGAAAAACGAAGGGAAAAGGATCGAATTCGTTCGGGGAAAGAACTGCAAGAAGCGAAACGAATGGCAGAAGGAACTGAATGGAAACGCTATAAAGATTCTAGACAAGCTGAGATAAAGGAGGAGAAAAAAGCAAAAGAAAAGGTTTTACAAGCACTAGAACAGAACAAGATAGAAAGAAAAAGGGATCTTGGAATGCCCTCTGAAGTAACTAGAAGCATTGCTGCTAAAGCCATCACAATTGGAGCACAGGAAAAGTATGAACATAAATCACAAAATTCAGGCTCAATGAGAGAATGTTTAAGGTCTCTTAGGCACAATCAAAAGGATGATCCTGAAAAAGTGAGAAATGCCTTCCAAACCCTCTTCACCTATGTTAGAAATGTAGCAAGAAATCCTGATGAGGAAAGGGTTCGGAAGATTCCGCTCGGTAATCCTTTGTTCCAGGAAAGAGTTGGGAGTTTGAAAGAAGGGATCGAGTTTCTCGAGCTTTGTGGCTTTCAGAGAGACGGAGACTTTCTCTACCTTCCTCGTGACAAGGTCGACCGGGACGTTTTAGTCACGGCTGGATTGTTATTGGAATCTGCAATGACAAATCCCTTTTTTGGCATTCTATGATCAACTTTGGTTTATTGAATTTGTCCAAAACCAGAAAGAGAAGGCACATAGCCTTCTTGCTTTGGGATTTGGACTTGTACTTAAGAACTCTGTGCTTTGTAGAATTACTTTCTCAAATGATTGTGTGATATCAGTGGTGATTTGAATGCATAAAATGAAGCCTTTTGGCTGAATCTTTCTGCTATGCTTATGAGAGTTCCTTGAA

Coding sequence (CDS)

ATGGCTTTTCTGGAGGTAAAACAGAAACTCTTACGCAAGGTCGAATCTTTAGGATTCTCGAGGGCCCGAGCAGCCCGAGCACTTCATGTTACTGGAAATGCCAGCTTTGAAGATGCGATCGATTGGATCGTTCATCACGAGAACGATCCGGATATTGATCAAGTGCCCCTGGTAGCAATAGAGATCGATATCGAATCTCCCGAACCATTTCATATCACAGAGGAAACGAAAAAGAAAGCTAATGAATTAAGGGATCAAATACTGAAAGAAAAGGAAAAGGAAGAAAAAGAGTTAGAAAAACGAAGGGAAAAGGATCGAATTCGTTCGGGGAAAGAACTGCAAGAAGCGAAACGAATGGCAGAAGGAACTGAATGGAAACGCTATAAAGATTCTAGACAAGCTGAGATAAAGGAGGAGAAAAAAGCAAAAGAAAAGGTTTTACAAGCACTAGAACAGAACAAGATAGAAAGAAAAAGGGATCTTGGAATGCCCTCTGAAGTAACTAGAAGCATTGCTGCTAAAGCCATCACAATTGGAGCACAGGAAAAGTATGAACATAAATCACAAAATTCAGGCTCAATGAGAGAATGTTTAAGGTCTCTTAGGCACAATCAAAAGGATGATCCTGAAAAAGTGAGAAATGCCTTCCAAACCCTCTTCACCTATGTTAGAAATGTAGCAAGAAATCCTGATGAGGAAAGGGTTCGGAAGATTCCGCTCGGTAATCCTTTGTTCCAGGAAAGAGTTGGGAGTTTGAAAGAAGGGATCGAGTTTCTCGAGCTTTGTGGCTTTCAGAGAGACGGAGACTTTCTCTACCTTCCTCGTGACAAGGTCGACCGGGACGTTTTAGTCACGGCTGGATTGTTATTGGAATCTGCAATGACAAATCCCTTTTTTGGCATTCTATGA

Protein sequence

MAFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAIEIDIESPEPFHITEETKKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGAQEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERVRKIPLGNPLFQERVGSLKEGIEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGLLLESAMTNPFFGIL

Homology

[Close]

BLAST of CmoCh12G010110 vs. ExPASy Swiss-Prot
Match: Q6GL77 (UBX domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubxn1 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.8e-13
Identity = 60/167 (35.93%), Postives = 96/167 (57.49%), Query Frame = 0


Query: 11  LRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAIEIDIES---- 70
           L  +  +GFS +RA +AL  TGN   E A+DW+V HE+DPDID+ P V +  D +S    
Sbjct: 7   LESLIEMGFSPSRAEKALAATGNQGIEPAMDWLVEHEDDPDIDE-PSVVVPEDSDSGTTD 66

Query: 71  -------PEPFHITEETKKKANELRDQILKEKEKEEKELEKR----REKDRIRSGKELQE 130
                   E   +TEE K+K  +   +++ +K+KE +E EKR    +EK R + G+EL  
Sbjct: 67  TQGMDTCEERLPLTEEEKEKQTKRMMELIAQKQKEREEREKRERIEQEKQRRKQGQELSA 126

Query: 131 AKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLG 163
            K+  +  E ++  + R+ E +EEK A+++V + + ++K ER R  G
Sbjct: 127 VKQKIQEQEMQKAVEDRRREKQEEKLARDRVREKIARDKAERARRFG 172

[Close]

BLAST of CmoCh12G010110 vs. ExPASy Swiss-Prot
Match: Q6GLV4 (UBX domain-containing protein 1-B OS=Xenopus laevis OX=8355 GN=ubxn1-b PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.5e-12
Identity = 59/170 (34.71%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 11  LRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAIEIDI------ 70
           L  +  +GFS +RA +AL  TGN   E A+DW+V HE+DPDI + P V I  D       
Sbjct: 7   LESLIEMGFSPSRAEKALSATGNQGIEPAMDWLVEHEDDPDIKE-PSVVIPEDSGTDTTD 66

Query: 71  --------ESPEPFHITEETKKKANELRDQILKEKEKEEKELEKR----REKDRIRSGKE 130
                    S E   +TEE K+K  +   +++ +K+KE +E EKR    +EK R + G+E
Sbjct: 67  TTDTQAMDTSAERLPLTEEEKEKQTKRMMELIAQKQKEREEREKRERIEQEKQRRKHGQE 126

Query: 131 LQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLG 163
           L   K+  +  E ++  + R+ E +EE+ A+E+V + + ++K +R R  G
Sbjct: 127 LSAIKQRMQEQEMQKAAEDRRREKQEERLARERVREKIARDKADRARKFG 175

[Close]

BLAST of CmoCh12G010110 vs. ExPASy Swiss-Prot
Match: Q6IP50 (UBX domain-containing protein 1-A OS=Xenopus laevis OX=8355 GN=ubxn1-a PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.7e-11
Identity = 58/175 (33.14%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 11  LRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAIE--------- 70
           L  +  +GFS  RA +AL  TGN   E A+DW+V HE+DPDID+  +V  E         
Sbjct: 7   LESLIEMGFSSTRAEKALTATGNQGIEPAMDWLVEHEDDPDIDEPSVVVPEGSSTDTADT 66

Query: 71  ------IDIE----SPEPFHITEETKKKANELRDQILKEKEKEEKELEKR----REKDRI 130
                  D +    S E   +TEE K+K  +   +++ +K+ E +E EK+    +EK R 
Sbjct: 67  TDTTDTTDTQGMDTSAERLPLTEEEKEKQTKRMMELVAQKQNEREEREKKERIEQEKQRR 126

Query: 131 RSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLG 163
           + G+EL   K+  +  E ++  + R+ E +EEK A+E+V + + ++K +R R  G
Sbjct: 127 KHGQELSAIKQKMQEQEMQKAAEDRRREKQEEKMARERVREKIARDKADRARRFG 181

[Close]

BLAST of CmoCh12G010110 vs. ExPASy Swiss-Prot
Match: Q922Y1 (UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.2e-10
Identity = 55/175 (31.43%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 11  LRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAIEIDIESPEPF 70
           L  +  +GF R RA +AL +TGN   E A+DW++ HE+DPD+D+ PL      +   EP 
Sbjct: 7   LESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDE-PLETPLSHVLGREPT 66

Query: 71  H-------------------ITEETKKKANELRDQILKEKEKEEKELEKR----REKDRI 130
                               +TEE +++  +   +++ +K++E +E E+R    REK R 
Sbjct: 67  PSEQVGPEGSGSAAGESRPILTEEERQEQTKRMLELVAQKQREREEREEREALEREKQRR 126

Query: 131 RSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLG 163
           R G+EL  A++  +  E +R  + R+ E  EE  A+++V + +E++K ER +  G
Sbjct: 127 RQGQELSVARQKLQEDEMRRAAEERRREKAEELAARQRVREKIERDKAERAKKYG 180

[Close]

BLAST of CmoCh12G010110 vs. ExPASy Swiss-Prot
Match: Q499N6 (UBX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubxn1 PE=3 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09
Identity = 56/175 (32.00%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 11  LRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAIEIDIESPEPF 70
           L  +  +GF R RA +AL +TGN   E A+DW++ HE+DPD+D+ PL      I   EP 
Sbjct: 7   LESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDE-PLETPLSHILGREPT 66

Query: 71  H-------------------ITEETKKKANELRDQILKEKEKEEKELEKR----REKDRI 130
                               +TEE +++  +   +++ +K++E +E E+R    REK R 
Sbjct: 67  PSEQVGPEGSGSAAGESKPVLTEEERQEQTKRMLELVAQKQREREEREEREALEREKQRR 126

Query: 131 RSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLG 163
           R G+EL  A++  +  E +R  + R+ E  EE  A+++V + +E++K ER +  G
Sbjct: 127 RQGQELSAARQKLQEDEIRRAAEERRREKAEELAARQRVREKIERDKAERAQKYG 180

[Close]

BLAST of CmoCh12G010110 vs. ExPASy TrEMBL
Match: A0A6J1FC35 (UBX domain-containing protein 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444260 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.5e-159
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MAFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI 60
           MAFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI
Sbjct: 1   MAFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI 60

Query: 61  EIDIESPEPFHITEETKKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMA 120
           EIDIESPEPFHITEETKKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMA
Sbjct: 61  EIDIESPEPFHITEETKKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMA 120

Query: 121 EGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGA 180
           EGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGA
Sbjct: 121 EGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGA 180

Query: 181 QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERVRKIPL 240
           QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERVRKIPL
Sbjct: 181 QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERVRKIPL 240

Query: 241 GNPLFQERVGSLKEGIEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGLLLESAMTNPFFG 300
           GNPLFQERVGSLKEGIEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGLLLESAMTNPFFG
Sbjct: 241 GNPLFQERVGSLKEGIEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGLLLESAMTNPFFG 300

Query: 301 IL 303
           IL
Sbjct: 301 IL 302

[Close]

BLAST of CmoCh12G010110 vs. ExPASy TrEMBL
Match: A0A6J1FCY3 (E3 ubiquitin-protein ligase BRE1A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444260 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.5e-159
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MAFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI 60
           MAFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI
Sbjct: 33  MAFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI 92

Query: 61  EIDIESPEPFHITEETKKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMA 120
           EIDIESPEPFHITEETKKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMA
Sbjct: 93  EIDIESPEPFHITEETKKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMA 152

Query: 121 EGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGA 180
           EGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGA
Sbjct: 153 EGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGA 212

Query: 181 QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERVRKIPL 240
           QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERVRKIPL
Sbjct: 213 QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERVRKIPL 272

Query: 241 GNPLFQERVGSLKEGIEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGLLLESAMTNPFFG 300
           GNPLFQERVGSLKEGIEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGLLLESAMTNPFFG
Sbjct: 273 GNPLFQERVGSLKEGIEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGLLLESAMTNPFFG 332

Query: 301 IL 303
           IL
Sbjct: 333 IL 334

[Close]

BLAST of CmoCh12G010110 vs. ExPASy TrEMBL
Match: A0A6J1HMR5 (UBX domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465598 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.7e-155
Identity = 294/302 (97.35%), Postives = 298/302 (98.68%), Query Frame = 0


Query: 1   MAFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI 60
           MAFLEVKQKLLRKVESLGFSRA+AARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI
Sbjct: 1   MAFLEVKQKLLRKVESLGFSRAQAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI 60

Query: 61  EIDIESPEPFHITEETKKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMA 120
           EIDIESPEPFHITEE KKKANELRDQILKEKEKEEKELEK+REKDR RSGKELQEAKRMA
Sbjct: 61  EIDIESPEPFHITEEMKKKANELRDQILKEKEKEEKELEKQREKDRNRSGKELQEAKRMA 120

Query: 121 EGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGA 180
           EGTEWKRYKDSRQAEIKEEKKAKEKVLQ LEQNKIERKRDLGMPSEVTRSIAAKAITIGA
Sbjct: 121 EGTEWKRYKDSRQAEIKEEKKAKEKVLQTLEQNKIERKRDLGMPSEVTRSIAAKAITIGA 180

Query: 181 QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERVRKIPL 240
           QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEER+RKIPL
Sbjct: 181 QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERIRKIPL 240

Query: 241 GNPLFQERVGSLKEGIEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGLLLESAMTNPFFG 300
           GNPLFQERVGSLKEG EFLELCGFQRDGDFLYLPRDKVDRDVLVTAG+LLESAMTNPFFG
Sbjct: 241 GNPLFQERVGSLKEGTEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGMLLESAMTNPFFG 300

Query: 301 IL 303
           IL
Sbjct: 301 IL 302

[Close]

BLAST of CmoCh12G010110 vs. ExPASy TrEMBL
Match: A0A6J1HPV0 (uncharacterized protein LOC111465598 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465598 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.7e-155
Identity = 294/302 (97.35%), Postives = 298/302 (98.68%), Query Frame = 0


Query: 1   MAFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI 60
           MAFLEVKQKLLRKVESLGFSRA+AARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI
Sbjct: 33  MAFLEVKQKLLRKVESLGFSRAQAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI 92

Query: 61  EIDIESPEPFHITEETKKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMA 120
           EIDIESPEPFHITEE KKKANELRDQILKEKEKEEKELEK+REKDR RSGKELQEAKRMA
Sbjct: 93  EIDIESPEPFHITEEMKKKANELRDQILKEKEKEEKELEKQREKDRNRSGKELQEAKRMA 152

Query: 121 EGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGA 180
           EGTEWKRYKDSRQAEIKEEKKAKEKVLQ LEQNKIERKRDLGMPSEVTRSIAAKAITIGA
Sbjct: 153 EGTEWKRYKDSRQAEIKEEKKAKEKVLQTLEQNKIERKRDLGMPSEVTRSIAAKAITIGA 212

Query: 181 QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERVRKIPL 240
           QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEER+RKIPL
Sbjct: 213 QEKYEHKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERIRKIPL 272

Query: 241 GNPLFQERVGSLKEGIEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGLLLESAMTNPFFG 300
           GNPLFQERVGSLKEG EFLELCGFQRDGDFLYLPRDKVDRDVLVTAG+LLESAMTNPFFG
Sbjct: 273 GNPLFQERVGSLKEGTEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGMLLESAMTNPFFG 332

Query: 301 IL 303
           IL
Sbjct: 333 IL 334

[Close]

BLAST of CmoCh12G010110 vs. ExPASy TrEMBL
Match: A0A6J1ESJ7 (UBX domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436126 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 1.1e-109
Identity = 225/311 (72.35%), Postives = 257/311 (82.64%), Query Frame = 0


Query: 1   MAFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI 60
           MAFLEVKQKLLR++E LGF RARA RALH TGN S E AI+W++ HENDPDIDQ+PLVAI
Sbjct: 1   MAFLEVKQKLLREIEDLGFPRARAVRALHSTGNVSTEAAINWLIDHENDPDIDQMPLVAI 60

Query: 61  EIDIESPEPFHITEETKKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMA 120
           EIDIESPEPFHITEE K+KA ELRDQI KEKEKEEK+LE++REKDRIRSGKELQEAKR A
Sbjct: 61  EIDIESPEPFHITEEMKRKAKELRDQIRKEKEKEEKKLERQREKDRIRSGKELQEAKRTA 120

Query: 121 EGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGA 180
           E  E KRY DSRQA+ +EEK+A+EKVLQ L+Q+KIER+R+ GM SE + S+  K+    A
Sbjct: 121 EEAERKRYIDSRQADKQEEKRAREKVLQKLQQDKIERRRNSGMLSERSESLDTKSNATEA 180

Query: 181 QEKYEHKSQNS---------GSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPD 240
            +K E +SQNS          SMRECLRSLR +QKDD +KVR A++TLF YVRNVA+NPD
Sbjct: 181 GKKDELRSQNSLPATSVSKAVSMRECLRSLRRHQKDDSDKVRTAYRTLFIYVRNVAKNPD 240

Query: 241 EERVRKIPLGNPLFQERVGSLKEGIEFLELCGFQRDGDFLYLPRDKVDRDVLVTAGLLLE 300
           EE+ RKI L NPLFQERVGSLK GIEFLELCGF+R G+FLYLPRDKVDR  LVTAG LLE
Sbjct: 241 EEKFRKIRLSNPLFQERVGSLKGGIEFLELCGFERGGEFLYLPRDKVDRGALVTAGSLLE 300

Query: 301 SAMTNPFFGIL 303
           SAMTNPFFG +
Sbjct: 301 SAMTNPFFGAI 311

[Close]

BLAST of CmoCh12G010110 vs. TAIR 10
Match: AT1G04850.1 (ubiquitin-associated (UBA)/TS-N domain-containing protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.7e-75
Identity = 159/308 (51.62%), Postives = 214/308 (69.48%), Query Frame = 0


Query: 1   MAFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAI 60
           M   +V   +L ++E++GF +ARA RALH +GNAS E A++W+V HENDPD+D++P V  
Sbjct: 106 MVVPDVDNNILEELEAMGFPKARATRALHYSGNASLEAAVNWVVEHENDPDVDEMPKVPS 165

Query: 61  EIDIESPEPFHITEETKKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMA 120
             ++   +P    EE K KA ELR++  K+KE+EEK +E+ REK+RIR GKEL EAKRM 
Sbjct: 166 NSNVGPAKPALTPEEVKLKAQELRERARKKKEEEEKRMEREREKERIRIGKELLEAKRME 225

Query: 121 EGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGA 180
           E  E KR    R+AE +EEK+A+EK+ Q LE++K ER+R LG+P E   + AAK      
Sbjct: 226 EVNERKRLMFLRKAEKEEEKRAREKIRQKLEEDKAERRRKLGLPPEDPATAAAKPSVPVV 285

Query: 181 QEKYE----HKSQNSGSMRECLRSLRHNQKDDPEKVRNAFQTLFTYVRNVARNPDEERVR 240
           +EK        +  +  MRECLRSL+   K+D  KV+ AFQTL TY+ NVA+NPDEE+ R
Sbjct: 286 EEKKVTLPIRPATKTEQMRECLRSLKQAHKEDDAKVKRAFQTLLTYMGNVAKNPDEEKFR 345

Query: 241 KIPLGNPLFQERVGSLKEGIEFLELCGFQR--DGDFLYLPRDKVDRDVLVTAGLLLESAM 300
           KI L N  FQERVGSL+ GIEF+ELCGF++   G+FL+LPRDK+D  ++ +AG  L SA+
Sbjct: 346 KIRLTNQTFQERVGSLRGGIEFMELCGFEKIEGGEFLFLPRDKIDSAIINSAGTELNSAI 405

Query: 301 TNPFFGIL 303
            NPFFG+L
Sbjct: 406 NNPFFGVL 413

[Close]

BLAST of CmoCh12G010110 vs. TAIR 10
Match: AT5G48690.1 (CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 7001 Blast hits to 5165 proteins in 492 species: Archae - 9; Bacteria - 505; Metazoa - 2653; Fungi - 905; Plants - 287; Viruses - 19; Other Eukaryotes - 2623 (source: NCBI BLink). )

HSP 1 Score: 242.3 bits (617), Expect = 5.1e-64
Identity = 151/309 (48.87%), Postives = 200/309 (64.72%), Query Frame = 0


Query: 2   AFLEVKQKLLRKVESLGFSRARAARALHVTGNASFEDAIDWIVHHENDPDIDQVPLVAIE 61
           A +EV   LL+++E +GFS ARAA ALH +GN+S E A++WI+ HEN+   + +PLV   
Sbjct: 8   AAIEVNHGLLKELEDMGFSMARAAWALHHSGNSSLEAAVNWIIDHENESQFENMPLVEFN 67

Query: 62  IDIESPEPFHITEETK-KKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMA 121
           I+IESP P   T ET   +A EL +Q  K +E++E + E+ REK+RIR+GKEL E KR+A
Sbjct: 68  IEIESPNPSDDTAETSHARAKELSEQARKLREEQETKREREREKERIRAGKELMETKRIA 127

Query: 122 EGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGA 181
           E  E KR    R+AE  EEKKA+EK++  +  +K+ERKR LG+P+E   +  +  ++   
Sbjct: 128 EENERKRNIALRKAEKDEEKKAREKIMLKVNADKLERKRRLGLPTETESASTSNPVSPLD 187

Query: 182 QEKYEHKS----QNSGSMRECLRSLRHNQKD-DPEKVRNAFQTLFTYVRNVARNPDEERV 241
            ++    S      +  MRECLRSLR N KD DP   R  F+TL T VRNVA+ PDEER 
Sbjct: 188 PKRIVMSSPSVVSKAEEMRECLRSLRRNHKDEDPRITRRVFETLLTIVRNVAKKPDEERY 247

Query: 242 RKIPLGNPLFQERVGSLKEGIEFLELCGFQR--DGDFLYLPRDKVDRDVLVTAGLLLESA 301
           R+I L N LF ERVG  KEGIEF+ELCGF+R    +FL L +   D + L  A  LL SA
Sbjct: 248 RRIRLKNRLFHERVGRYKEGIEFMELCGFKRVEGSEFLSLSKRDSDINRLRDAAFLLNSA 307

Query: 302 MTNPFFGIL 303
             NPFFG+L
Sbjct: 308 SANPFFGLL 316

[Close]

BLAST of CmoCh12G010110 vs. TAIR 10
Match: AT5G48690.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 172.6 bits (436), Expect = 5.0e-43
Identity = 111/233 (47.64%), Postives = 149/233 (63.95%), Query Frame = 0


Query: 77  KKKANELRDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMAEGTEWKRYKDSRQAEI 136
           +++ N  ++Q  K +E++E + E+ REK+RIR+GKEL E KR+AE  E KR    R+AE 
Sbjct: 34  QEQKNYRKEQARKLREEQETKREREREKERIRAGKELMETKRIAEENERKRNIALRKAEK 93

Query: 137 KEEKKAKEKVLQALEQNKIERKRDLGMPSEVTRSIAAKAITIGAQEKYEHKS----QNSG 196
            EEKKA+EK++  +  +K+ERKR LG+P+E   +  +  ++    ++    S      + 
Sbjct: 94  DEEKKAREKIMLKVNADKLERKRRLGLPTETESASTSNPVSPLDPKRIVMSSPSVVSKAE 153

Query: 197 SMRECLRSLRHNQKD-DPEKVRNAFQTLFTYVRNVARNPDEERVRKIPLGNPLFQERVGS 256
            MRECLRSLR N KD DP   R  F+TL T VRNVA+ PDEER R+I L N LF ERVG 
Sbjct: 154 EMRECLRSLRRNHKDEDPRITRRVFETLLTIVRNVAKKPDEERYRRIRLKNRLFHERVGR 213

Query: 257 LKEGIEFLELCGFQR--DGDFLYLPRDKVDRDVLVTAGLLLESAMTNPFFGIL 303
            KEGIEF+ELCGF+R    +FL L +   D + L  A  LL SA  NPFFG+L
Sbjct: 214 YKEGIEFMELCGFKRVEGSEFLSLSKRDSDINRLRDAAFLLNSASANPFFGLL 266

The following BLAST results are available for this feature:

BLAST of CmoCh12G010110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6GL77	1.8e-13	35.93	UBX domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubxn1 PE=2 SV=1	[more]
Q6GLV4	7.5e-12	34.71	UBX domain-containing protein 1-B OS=Xenopus laevis OX=8355 GN=ubxn1-b PE=2 SV=1	[more]
Q6IP50	3.7e-11	33.14	UBX domain-containing protein 1-A OS=Xenopus laevis OX=8355 GN=ubxn1-a PE=2 SV=1	[more]
Q922Y1	9.2e-10	31.43	UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1	[more]
Q499N6	1.2e-09	32.00	UBX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubxn1 PE=3 SV=2	[more]

BLAST of CmoCh12G010110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FC35	2.5e-159	100.00	UBX domain-containing protein 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FCY3	2.5e-159	100.00	E3 ubiquitin-protein ligase BRE1A-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1HMR5	1.7e-155	97.35	UBX domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HPV0	1.7e-155	97.35	uncharacterized protein LOC111465598 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1ESJ7	1.1e-109	72.35	UBX domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114361...	[more]

BLAST of CmoCh12G010110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04850.1	1.7e-75	51.62	ubiquitin-associated (UBA)/TS-N domain-containing protein	[more]
AT5G48690.1	5.1e-64	48.87	CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor E...	[more]
AT5G48690.2	5.0e-43	47.64	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 133..156
None	No IPR available	COILS	Coil	Coil	coord: 73..108
None	No IPR available	SMART	SM00580	PGNneu	coord: 214..275 e-value: 1.4E-15 score: 67.7
None	No IPR available	GENE3D	1.20.58.2190		coord: 196..287 e-value: 1.1E-24 score: 87.9
None	No IPR available	GENE3D	1.10.8.10		coord: 8..53 e-value: 6.2E-16 score: 60.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..115
None	No IPR available	PANTHER	PTHR46713	F13M7.16 PROTEIN	coord: 1..302
None	No IPR available	PANTHER	PTHR46713:SF10	UBX DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 1..302
IPR018997	PUB domain	PFAM	PF09409	PUB	coord: 210..279 e-value: 8.6E-20 score: 70.5
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 5..46 score: 10.209476
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 5..56
IPR036339	PUB-like domain superfamily	SUPERFAMILY	143503	PUG domain-like	coord: 198..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G010110.1	CmoCh12G010110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding