CmoCh12G009970 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G009970
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	violaxanthin de-epoxidase, chloroplastic
Location	Cmo_Chr12: 9320394 .. 9326286 (+)
RNA-Seq Expression	CmoCh12G009970
Synteny	CmoCh12G009970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTAAGCGCACGGTTTCCACACAAAAATGGCGGCTTATCTGAACCCCAAATTCCCACATTTTTTCTATCCTTCGTCTTCCTCCTCCTACGTTCACTTCTCTGCAAACCCTTAATGCCCACCTCTGCCATGAAATCCGTCTGGCCCTCCTCTGCTTCTTCATCTTCACCTTCATTTCTTCCTCCTAGCTTCACTACCAACTCTGTCGCCACTACCAGGTCTGTCTAATTTCGTTTTTTTTTTAAGGTTTTTCTATGAAATTTATGTCGGAACATTCCTAAATTGGGGTTTGTGTCGGTTGTAACGCTGATTTGCGAATTGGGGTTTGGTTTTTTGAATTTATTGATTCATGGTTATATGTAATGCAGGGGAATGCTGAAATTGATGAGGATTTTGTTTTGTTTGAAATCGTGTATTGATGTACTAAATAGTTTATATAATGCATTATAAACAAAAGTGAAGTAGTTTTGTGAGATCCCACGTCGGTTGGAGAGGGGAACGGAACATTCTCTATAAGAATGGTGTGGAAACTTCTCCCTAGTAGATGCGTTTTAAAACCGTGAGGCTGACGGTGGTACGTAACAGGCCAAAGTGGATAATATCTGCTAAGGTTTTGGGCTGTTACAAATGGTATCAAAGTTAGACATCGGCGGTGTGCCAGTGAGGACATTGGCCTCCGAGAGAGGTGGATTATGGGATCCCACGTTTAGTTGGAGAGGGGTACGAAGCATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTTAAACAGTGGTTGACGACGATGCGTAATGGGACAAAGCGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGATATTAGAGTTAGACACCAGGCGGTGTGCCAACAAGGATGTTGGCACCCAAGGAGGTGGATTACGAGATCCCACATTGGTTGGAGTGGGGAACAAAACTTTCCTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAGACTGTGAGGCTTACTGCGATATGTAATGGGCCAAAGCTGACAATATCTACGAACGGATGCGTCTGCTAAGGAGAGGTTTCCACATCCTTATACAAAAAATGGTTCGTTCTCTACCCCAATCTATGTGGGATCTCACAATCCACCCCCTTCGGGGCAACAGTTTTTTAAAACGCATCTGCAAGAGGGAGGTTTCCACATGCTTATAAAGAATGGTTCGTTCTCCTCCCAACCGATGTGGGATCTCACAATCCACCTCCCTTTAGGACTCAGTGTCCTTGTCGGCACATCGCCTAGTGTCCACCCTCTTCAGGGCTTAGCCTCCTCGCTAACACATCACCCGGTGTCTAGATCTGATACCATTTGTAACAACTCAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGGTTTTCCTTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGCATTTGCTAGGAAGAGGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCCTCTCCAACCGATGTGGGTTCTCACAATCCACCCCCTTTCGGGGCCGAACGTCCTTGCTGGAACACCACCTCGTATCCACTCCCCTTTGGGGCTCAGCCTCCTTGCTGGCACATCCCCAATGTCTGGCTCTGATACCATTTGCAACAACCCAACCCCACCTCTAGCAGATTGTTCTCTTTGGGCTTTACCTTTCATGCTTCCCCTCAAAGTTTTAAAAATGTATCCTTATAAACAATGCTTCATTCTCCTCCCAACCGATGTGAGATCTCACATTTATCCTACCTTCTTTTACGCTCAAATCAACCGAACCCAAATTCCTCGGACTGTCAGCAATCTAGTATCTTGTTTGGTTGATGGTGATAGATGATTGTTAATCACTTAACAAATGGTTGTAATGCTTGCAGGAGAAAGGTGCTATGTTATCATGGAATACTAGTGGACAAAATATATTCAAAATACTTCTTACCTTGCAAATCTACTTCCACTGGTAGAGTGTGTAAGTCAAGAAGTTTAACAGTTCTGTCCCATAGGTCAGAGAAGAATGCCTTATGTCAAACGAAGATAAGTAAACCTAAGGTACCTTCCTATGTATACCTTAGTTTCATTAAACGTGCTCGTTTTTTTTCTCTTTTCTCTCATCACTTTTGCGTTGCCTGGTTTATCTGTCTATTCGGAAGGTCGATGAACGCTTCGACTTTATTTTTGGAACATTATCGAGTGTTCTTCGAGAATGGAGCCAATTACGGTCGATGGGTGTAGTTATTATATTGGCATGTACTCTCATGTTCGTTCCATCGTCTCGAGCTGTTGATGCACTCAAAACATGTACATGCTTACTAAAGGAATGCAGGTATTTCTAGTTTATCCTTGCTGATTGGTACCTCATATCATAGCGTCTCTCCTTCGTGTTTCTATTGTGAGTTAAGGATTTTACCAAAAGAGTGTCTGTGATTCGAGGAAATAATAATAATAATAATTTCGCCTCGGTTCGTGGTTAGAGTAATTGTTGGTCTTTTTGTATCTTGGTTCTGTGGAGATGAGTATCGTGAGGTCCTACATCGATTGGAGAGAGAAATGAATGCCAGTGAGGACGCTGGGCCCTGAAGGGGGTGGATTGTGAGATTCCACATCGGTTGGAGAATGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCACTAGCAGATACTTTTTAAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGAATAGTATCTGCTAGCGTTTGGTTTGGGCTGTTATAAATGGTATCAAAGCCAGACATTGGGTGGTGTGCTAGCGAGTACACTAAGCCTCGAAGGGGGGTGGACACCAGGTAGTGTGCCATTGAGGACATGGGCCCCGAAGGGAGGTGGATTGTGAAATCTCACATCGATTGGAGAGAGAAACGAGTACCAGCAAGGACGTTGGGCCTCGAAGGGGGGTGGATTGTGAGATAGGGTGTGAAAACCTCTCCCTAGCAAACGTGTTTTAAAAACCTTAAGTGGAAGCCCAAAAGGGAAAGCTCAAAGAAGATAATATCTGCTAACGGTAGGCTTGGCCTAGTGCAAGTTTCTACTGTTATAGAATGTGCCCTTTTTTATGTTCATTTCCTCCTCTCTCGGTTAGCGTTTGCCCCACTTTCGCGACCATGGCTTACCCTCTTCTTCTTCCCATTCGGGTTTCTGTCATCTCACTTTCGAAAGAGAGCCTATGCTTAGTATCCTTGATCCGGAAGTCACCTTTTCCCTAAACGGGAGGTACGTTTGGCCAAAGCAGCTCTCTCTTCAGTCTGTTTCCCATCGTAAGTAGGAGTCCGTTTCCCATTCATCAAGTAGTGTTCGGAGAAAGGTTTTTAATCTTCTATTATAAAGTCATTAGATTTTGCAAAAATTTCATAGAAACAATATTATCCATGAGCGTCGACGCCTACGAACGAGAGAACCACCTGATTTTACTATATTTGGTTGACAAAGATACTCGTAGGATATTAAATCTTAGACGGACGGCTACTATAGTTTGAACCTTTTTTCACTACTCCAACGACCACTAAACCGACCCATGGTTGTTCCAACGCTTCTTTACTAATATCACGTGGCTTCTAAAACGGCTAGTTTCTTCTCCCTTATGTCAGGCTTGAACTTGCCAAATGCATATCAAACCCATTATGTGCTGCCAATGTTGCTTGTCTCCAAACCTGCAACGATCGACCCGACGAGACTGAATGCCAGGTTAGTTTTCTCATGGCTCTACGTAACGCGTCACACGATTTCAGAAATTAACTAATTTTTTTCTCTTTGTAGATTAAATGTGGTGACCTATTCGAAAACAGCGTCGTGGATGAATTTAATGAATGTGCAGTGTCACGAAAAAAATGTGTACCTACGAAATCTGATGTCGGGGACTTTCCTGTACCCGACCCGTCTGTTCTTGTCAAGAGTTTCAATATATCAGATTTCAGTGGGAAGTGGTTTATCACTAGTGGCTTAAATCCTACTTTTGATACGTTTGATTGTCAGTTGCATGAATTTCATGTAGAGTCTGGCAAACTTGTTGGAAATATAACGTGGAGAATACGAACTCCAGATAGCGGTTTTTTCACTCGGTCGACGACGCAGAGATTCGTGCAAGATCCCGAGCATCCTGGGATACTCTATAACCACAACAATGAGTATCTTCACTATGAGGATGACTGGTATGCTTTCATTTCATTTCTAAATGTTCAAATTTCCTTGTACCTGATCTATTCCATTGGGATTCCCACTACCATGCGGGGTTTCCCCTCAAGATTTTAAAACGTGTCTACTAGAGAGAGAGTCTAGCCCTACTCTGATTAGTGCCTCGCACCGTTCGGTGACTGACTCTTATACCATTTGTAACCGCCTAAGTCCACTGCTACCAAATATTGTTCTCTTTGGGCTTTCCCTTCTGAGCTTCCCCTCAATGTTTTAAAATACGTCTACTTGGGGAGGTTTCACACCCTTATAAGAATTGTTTCGTTCTCCTCTCCAACCAATGTGGGATCTCACAATCCACCCACCTTGGGGGGCCAACGTCCTCGCTGGCACATCACCTGGTGTTTGGCTCTGATACCATTTGTAACGGCCCAAACCCACCGCTAGCATTTGGGCTTTTCCTTTTGGACTTCCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAAAGAGTCTGGCCCTACTCCGACCAGTGCCTCGCACCGTCCAGTAACTGACTCTGATACCATTTGTAACATCCTAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTGCACTTAAGGTTTTAAAACACGTTTACTAGAGAGAGGTTTCCACACCCTTATAAGGAATGTTTCGTTCCTCTCTCCAACCAATGTGGGATCTCACAATCCACCCCCCTTGGGGGGCCAACGTCCTTGCTGGCACACTACTCGATGTCTGGTTCTGATACCATTTATAATAGCCCAAGCCTACGGCTAGTAGATATTATCCTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTGTCTACTAGGGAGAGAGTCTAGCCCTACTCCGATTAGTGCCTCGCACCATCCAGTAACTGGCTCTGATACCATTTGTAACAACCCAACCCCATCGCTAGCAGATATTATTCTCTTTGGACTTCCTCTCAAGATTTTAAAACGCAGCTATTAAGAAAAGGTTTTCACACTCTTAAAGACCAAAATCCTTTCCTGTTATTTGATCATATGTAGCCTCAACTAGGAATTGTAATTGTTTATCTCCTTCCTTCTCAGGTATATATTATCAAGCCAGGTGGAGAACAAACCCGACGATTACATTTTCGTATACTATCGTGGTCGGAACGATGCATGGGATGGCTACGGCGGAGCCGTTGTATACACAAGAAGCGCAGTATTGCCAGAAAGCGTAGTTCCCGAGCTAGAAAGGGCAGCTAAGAGCGTAGGGAGAGACTTCAACAAGTTCATAAAAACAGACAATTCGTGTGGCCCGGAGCCGCCGCTCGTAGAAAGGCTAGAGAAGACATTGGAAAGCGGAGAACAAACGATCGTTAGGGAAGTCGAACAGATCGAACAAGAGGTGGAGAAGGAGGTCGAACAGCTCGAAAAAGAGGTGGAAACAGTAGGGAAGGCAGAGATGTCATTGGTTGAGAAGTTGGGAGAAGGTCTTAAAGAACTTCAAAGGGATGAGGAATTCTTCCTTAGAGAGTTATCTAAAGAAGAGAGTGATCTTTTGAATGAGCTTAAAATGGAAGCAAATGAGGTTGAGAGTTTGTTTGGAAGAGCACTTGCTCTTAGAAAATTAAGATAAAAAGACTTTGATTATCATTACTTCTAAGATTATTATTAGCTAAACCCATT

mRNA sequence

CGTTAAGCGCACGGTTTCCACACAAAAATGGCGGCTTATCTGAACCCCAAATTCCCACATTTTTTCTATCCTTCGTCTTCCTCCTCCTACGTTCACTTCTCTGCAAACCCTTAATGCCCACCTCTGCCATGAAATCCGTCTGGCCCTCCTCTGCTTCTTCATCTTCACCTTCATTTCTTCCTCCTAGCTTCACTACCAACTCTGTCGCCACTACCAGGAGAAAGGTGCTATGTTATCATGGAATACTAGTGGACAAAATATATTCAAAATACTTCTTACCTTGCAAATCTACTTCCACTGGTAGAGTGTGTAAGTCAAGAAGTTTAACAGTTCTGTCCCATAGGTCAGAGAAGAATGCCTTATGTCAAACGAAGATAAGTAAACCTAAGGTCGATGAACGCTTCGACTTTATTTTTGGAACATTATCGAGTGTTCTTCGAGAATGGAGCCAATTACGGTCGATGGGTGTAGTTATTATATTGGCATGTACTCTCATGTTCGTTCCATCGTCTCGAGCTGTTGATGCACTCAAAACATGTACATGCTTACTAAAGGAATGCAGGCTTGAACTTGCCAAATGCATATCAAACCCATTATGTGCTGCCAATGTTGCTTGTCTCCAAACCTGCAACGATCGACCCGACGAGACTGAATGCCAGATTAAATGTGGTGACCTATTCGAAAACAGCGTCGTGGATGAATTTAATGAATGTGCAGTGTCACGAAAAAAATGTGTACCTACGAAATCTGATGTCGGGGACTTTCCTGTACCCGACCCGTCTGTTCTTGTCAAGAGTTTCAATATATCAGATTTCAGTGGGAAGTGGTTTATCACTAGTGGCTTAAATCCTACTTTTGATACGTTTGATTGTCAGTTGCATGAATTTCATGTAGAGTCTGGCAAACTTGTTGGAAATATAACGTGGAGAATACGAACTCCAGATAGCGGTTTTTTCACTCGGTCGACGACGCAGAGATTCGTGCAAGATCCCGAGCATCCTGGGATACTCTATAACCACAACAATGAGTATCTTCACTATGAGGATGACTGGTATATATTATCAAGCCAGGTGGAGAACAAACCCGACGATTACATTTTCGTATACTATCGTGGTCGGAACGATGCATGGGATGGCTACGGCGGAGCCGTTGTATACACAAGAAGCGCAGTATTGCCAGAAAGCGTAGTTCCCGAGCTAGAAAGGGCAGCTAAGAGCGTAGGGAGAGACTTCAACAAGTTCATAAAAACAGACAATTCGTGTGGCCCGGAGCCGCCGCTCGTAGAAAGGCTAGAGAAGACATTGGAAAGCGGAGAACAAACGATCGTTAGGGAAGTCGAACAGATCGAACAAGAGGTGGAGAAGGAGGTCGAACAGCTCGAAAAAGAGGTGGAAACAGTAGGGAAGGCAGAGATGTCATTGGTTGAGAAGTTGGGAGAAGGTCTTAAAGAACTTCAAAGGGATGAGGAATTCTTCCTTAGAGAGTTATCTAAAGAAGAGAGTGATCTTTTGAATGAGCTTAAAATGGAAGCAAATGAGGTTGAGAGTTTGTTTGGAAGAGCACTTGCTCTTAGAAAATTAAGATAAAAAGACTTTGATTATCATTACTTCTAAGATTATTATTAGCTAAACCCATT

Coding sequence (CDS)

ATGCCCACCTCTGCCATGAAATCCGTCTGGCCCTCCTCTGCTTCTTCATCTTCACCTTCATTTCTTCCTCCTAGCTTCACTACCAACTCTGTCGCCACTACCAGGAGAAAGGTGCTATGTTATCATGGAATACTAGTGGACAAAATATATTCAAAATACTTCTTACCTTGCAAATCTACTTCCACTGGTAGAGTGTGTAAGTCAAGAAGTTTAACAGTTCTGTCCCATAGGTCAGAGAAGAATGCCTTATGTCAAACGAAGATAAGTAAACCTAAGGTCGATGAACGCTTCGACTTTATTTTTGGAACATTATCGAGTGTTCTTCGAGAATGGAGCCAATTACGGTCGATGGGTGTAGTTATTATATTGGCATGTACTCTCATGTTCGTTCCATCGTCTCGAGCTGTTGATGCACTCAAAACATGTACATGCTTACTAAAGGAATGCAGGCTTGAACTTGCCAAATGCATATCAAACCCATTATGTGCTGCCAATGTTGCTTGTCTCCAAACCTGCAACGATCGACCCGACGAGACTGAATGCCAGATTAAATGTGGTGACCTATTCGAAAACAGCGTCGTGGATGAATTTAATGAATGTGCAGTGTCACGAAAAAAATGTGTACCTACGAAATCTGATGTCGGGGACTTTCCTGTACCCGACCCGTCTGTTCTTGTCAAGAGTTTCAATATATCAGATTTCAGTGGGAAGTGGTTTATCACTAGTGGCTTAAATCCTACTTTTGATACGTTTGATTGTCAGTTGCATGAATTTCATGTAGAGTCTGGCAAACTTGTTGGAAATATAACGTGGAGAATACGAACTCCAGATAGCGGTTTTTTCACTCGGTCGACGACGCAGAGATTCGTGCAAGATCCCGAGCATCCTGGGATACTCTATAACCACAACAATGAGTATCTTCACTATGAGGATGACTGGTATATATTATCAAGCCAGGTGGAGAACAAACCCGACGATTACATTTTCGTATACTATCGTGGTCGGAACGATGCATGGGATGGCTACGGCGGAGCCGTTGTATACACAAGAAGCGCAGTATTGCCAGAAAGCGTAGTTCCCGAGCTAGAAAGGGCAGCTAAGAGCGTAGGGAGAGACTTCAACAAGTTCATAAAAACAGACAATTCGTGTGGCCCGGAGCCGCCGCTCGTAGAAAGGCTAGAGAAGACATTGGAAAGCGGAGAACAAACGATCGTTAGGGAAGTCGAACAGATCGAACAAGAGGTGGAGAAGGAGGTCGAACAGCTCGAAAAAGAGGTGGAAACAGTAGGGAAGGCAGAGATGTCATTGGTTGAGAAGTTGGGAGAAGGTCTTAAAGAACTTCAAAGGGATGAGGAATTCTTCCTTAGAGAGTTATCTAAAGAAGAGAGTGATCTTTTGAATGAGCTTAAAATGGAAGCAAATGAGGTTGAGAGTTTGTTTGGAAGAGCACTTGCTCTTAGAAAATTAAGATAA

Protein sequence

MPTSAMKSVWPSSASSSSPSFLPPSFTTNSVATTRRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTKISKPKVDERFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESVVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVEQLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESLFGRALALRKLR

Homology

[Close]

BLAST of CmoCh12G009970 vs. ExPASy Swiss-Prot
Match: Q9SM43 (Violaxanthin de-epoxidase, chloroplastic OS=Spinacia oleracea OX=3562 GN=VDE1 PE=1 SV=2)

HSP 1 Score: 594.7 bits (1532), Expect = 9.3e-169
Identity = 280/384 (72.92%), Postives = 339/384 (88.28%), Query Frame = 0


Query: 109 REWS--QLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANV 168
           ++W+  +L+ + V  I+ACT   + S++AVDALKTCTCLLKECR+ELAKCI+NP CAANV
Sbjct: 96  KKWNLLKLKVVEVTAIVACTFFVMSSAQAVDALKTCTCLLKECRIELAKCIANPSCAANV 155

Query: 169 ACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLV 228
           ACLQTCN+RPDETECQIKCGDLF N VVDEFNECAVSRKKCVP KSDVG+FPVPDPSVLV
Sbjct: 156 ACLQTCNNRPDETECQIKCGDLFANKVVDEFNECAVSRKKCVPQKSDVGEFPVPDPSVLV 215

Query: 229 KSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTT 288
           KSFN++DF+GKWFI+SGLNPTFD FDCQLHEFH+E GKLVGN++WRI+TPD GFFTR+  
Sbjct: 216 KSFNMADFNGKWFISSGLNPTFDAFDCQLHEFHLEDGKLVGNLSWRIKTPDGGFFTRTAV 275

Query: 289 QRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAV 348
           Q+F QDP  PG+LYNH+N YLHY+DDWYILSS++EN+PDDY+FVYYRGRNDAWDGYGGA 
Sbjct: 276 QKFAQDPSQPGMLYNHDNAYLHYQDDWYILSSKIENQPDDYVFVYYRGRNDAWDGYGGAF 335

Query: 349 VYTRSAVLPESVVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVR 408
           +YTRSA +PE++VPEL RAA+SVG+DFNKFI+TDN+CGPEPPLVERLEKT+E GE+TI++
Sbjct: 336 LYTRSATVPENIVPELNRAAQSVGKDFNKFIRTDNTCGPEPPLVERLEKTVEEGERTIIK 395

Query: 409 EVEQIEQEVEKEVEQLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLL 468
           EVEQ+E E+E ++E+       VGK EM+L ++L EG +ELQ+DEE+FL+EL+KEE +LL
Sbjct: 396 EVEQLEGEIEGDLEK-------VGKTEMTLFQRLLEGFQELQKDEEYFLKELNKEERELL 455

Query: 469 NELKMEANEVESLFGRALALRKLR 491
            +LKMEA EVE LFGRAL +RKLR
Sbjct: 456 EDLKMEAGEVEKLFGRALPIRKLR 472

[Close]

BLAST of CmoCh12G009970 vs. ExPASy Swiss-Prot
Match: Q40251 (Violaxanthin de-epoxidase, chloroplastic OS=Lactuca sativa OX=4236 GN=VDE1 PE=1 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 3.5e-168
Identity = 290/424 (68.40%), Postives = 347/424 (81.84%), Query Frame = 0


Query: 67  KSRSLTVLSHRSEKNALCQTKISKPKVDERFDFIFGTLSSVLREWSQLRSMGVVIILACT 126
           K+ S +  SH  +K+ +C    S  ++ +RFD   G    + ++W Q   + + I+L CT
Sbjct: 60  KTSSFSDSSHCKDKSQICSIDTSFEEI-QRFDLKRGMTLILEKQWRQF--IQLAIVLVCT 119

Query: 127 LMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCG 186
            + VP   AVDALKTC CLLKECR+ELAKCI+NP CAANVACLQTCN+RPDETECQIKCG
Sbjct: 120 FVIVPRVDAVDALKTCACLLKECRIELAKCIANPSCAANVACLQTCNNRPDETECQIKCG 179

Query: 187 DLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNP 246
           DLFENSVVD+FNECAVSRKKCVP KSDVG+FPVPD + +V++FN+ DFSGKW+ITSGLNP
Sbjct: 180 DLFENSVVDQFNECAVSRKKCVPRKSDVGEFPVPDRNAVVQNFNMKDFSGKWYITSGLNP 239

Query: 247 TFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEY 306
           TFD FDCQLHEFH+E+ KLVGN+TWRI+T D GFFTRS  Q FVQDP+ PG LYNH+NE+
Sbjct: 240 TFDAFDCQLHEFHMENDKLVGNLTWRIKTLDGGFFTRSAVQTFVQDPDLPGALYNHDNEF 299

Query: 307 LHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESVVPELERAA 366
           LHY+DDWYILSSQ+ENKPDDYIFVYYRGRNDAWDGYGG+V+YTRS  LPES++P L++AA
Sbjct: 300 LHYQDDWYILSSQIENKPDDYIFVYYRGRNDAWDGYGGSVIYTRSPTLPESIIPNLQKAA 359

Query: 367 KSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVEQLEKEV 426
           KSVGRDFN FI TDNSCGPEPPLVERLEKT E GE+ +++E  +IE+EVEKEVE+     
Sbjct: 360 KSVGRDFNNFITTDNSCGPEPPLVERLEKTAEEGEKLLIKEAVEIEEEVEKEVEK----- 419

Query: 427 ETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESLFGRALAL 486
             V   EM+L ++L EG KELQ+DEE F+RELSKEE ++LNEL+MEA EVE LFGRAL +
Sbjct: 420 --VRDTEMTLFQRLLEGFKELQQDEENFVRELSKEEKEILNELQMEATEVEKLFGRALPI 473

Query: 487 RKLR 491
           RKLR
Sbjct: 480 RKLR 473

[Close]

BLAST of CmoCh12G009970 vs. ExPASy Swiss-Prot
Match: Q40593 (Violaxanthin de-epoxidase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=VDE1 PE=2 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 3.0e-167
Identity = 303/454 (66.74%), Postives = 348/454 (76.65%), Query Frame = 0


Query: 41  YHGILVDKIYSKYFLPCKSTSTGRVC---KSRSLTVLSH-RSEKNALCQTKISKPKVDER 100
           +  I+V KI S   +P     + R+C    SR L + SH +   +       + PK +  
Sbjct: 38  FGSIVVAKICSSRRIPRYFRKSPRICCGLDSRGLQLFSHGKHNLSPAHSINQNVPKGNSG 97

Query: 101 FDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKC 160
             F       V  +W Q     +V I    L     + AVDALKTCTCLLKECRLELAKC
Sbjct: 98  CKFPKDVALMVWEKWGQFAKTAIVAIF--ILSVASKADAVDALKTCTCLLKECRLELAKC 157

Query: 161 ISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGD 220
           ISNP CAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSDVGD
Sbjct: 158 ISNPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDVGD 217

Query: 221 FPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTP 280
           FPVPDPSVLV+ F++ DFSGKWFIT GLNPTFD FDCQLHEFH E  KLVGN++WRIRTP
Sbjct: 218 FPVPDPSVLVQKFDMKDFSGKWFITRGLNPTFDAFDCQLHEFHTEENKLVGNLSWRIRTP 277

Query: 281 DSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRN 340
           D GFFTRS  Q+FVQDP++PGILYNH+NEYL Y+DDWYILSS+VEN P+DYIFVYY+GRN
Sbjct: 278 DGGFFTRSAVQKFVQDPKYPGILYNHDNEYLLYQDDWYILSSKVENSPEDYIFVYYKGRN 337

Query: 341 DAWDGYGGAVVYTRSAVLPESVVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKT 400
           DAWDGYGG+V+YTRSAVLPES++PEL+ AA+ VGRDFN FIKTDN+CGPEPPLVERLEK 
Sbjct: 338 DAWDGYGGSVLYTRSAVLPESIIPELQTAAQKVGRDFNTFIKTDNTCGPEPPLVERLEKK 397

Query: 401 LESGEQTIVREVEQIEQEVEKEVEQLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLR 460
           +E GE+TI++EVE+IE+EVEK           V   E++L  KL EG KELQRDEE FLR
Sbjct: 398 VEEGERTIIKEVEEIEEEVEK-----------VRDKEVTLFSKLFEGFKELQRDEENFLR 457

Query: 461 ELSKEESDLLNELKMEANEVESLFGRALALRKLR 491
           ELSKEE D+L+ LKMEA EVE LFGRAL +RKLR
Sbjct: 458 ELSKEEMDVLDGLKMEATEVEKLFGRALPIRKLR 478

[Close]

BLAST of CmoCh12G009970 vs. ExPASy Swiss-Prot
Match: Q39249 (Violaxanthin de-epoxidase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VDE1 PE=1 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 8.7e-167
Identity = 284/395 (71.90%), Postives = 340/395 (86.08%), Query Frame = 0


Query: 97  FDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKC 156
           FD +     + L+E +    + +V +LAC  + VPS+ AVDALKTC CLLK CR+ELAKC
Sbjct: 75  FDIVPLPSKNELKELTAPLLLKLVGVLACAFLIVPSADAVDALKTCACLLKGCRIELAKC 134

Query: 157 ISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGD 216
           I+NP CAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSD+G+
Sbjct: 135 IANPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDLGE 194

Query: 217 FPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVE-SGKLVGNITWRIRT 276
           FP PDPSVLV++FNISDF+GKW+ITSGLNPTFD FDCQLHEFH E   KLVGNI+WRI+T
Sbjct: 195 FPAPDPSVLVQNFNISDFNGKWYITSGLNPTFDAFDCQLHEFHTEGDNKLVGNISWRIKT 254

Query: 277 PDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGR 336
            DSGFFTRS  Q+FVQDP  PG+LYNH+NEYLHY+DDWYILSS++ENKP+DYIFVYYRGR
Sbjct: 255 LDSGFFTRSAVQKFVQDPNQPGVLYNHDNEYLHYQDDWYILSSKIENKPEDYIFVYYRGR 314

Query: 337 NDAWDGYGGAVVYTRSAVLPESVVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEK 396
           NDAWDGYGGAVVYTRS+VLP S++PELE+AAKS+GRDF+ FI+TDN+CGPEP LVER+EK
Sbjct: 315 NDAWDGYGGAVVYTRSSVLPNSIIPELEKAAKSIGRDFSTFIRTDNTCGPEPALVERIEK 374

Query: 397 TLESGEQTIVREVEQIEQEVEKEVEQLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFL 456
           T+E GE+ IV+EVE+IE+EVEKEVE+       VG+ EM+L ++L EG  EL++DEE F+
Sbjct: 375 TVEEGERIIVKEVEEIEEEVEKEVEK-------VGRTEMTLFQRLAEGFNELKQDEENFV 434

Query: 457 RELSKEESDLLNELKMEANEVESLFGRALALRKLR 491
           RELSKEE + L+E+KMEA+EVE LFG+AL +RK+R
Sbjct: 435 RELSKEEMEFLDEIKMEASEVEKLFGKALPIRKVR 462

[Close]

BLAST of CmoCh12G009970 vs. ExPASy TrEMBL
Match: A0A6J1FAS6 (violaxanthin de-epoxidase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443955 PE=4 SV=1)

HSP 1 Score: 970.7 bits (2508), Expect = 2.3e-279
Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 0


Query: 1   MPTSAMKSVWPSSASSSSPSFLPPSFTTNSVATTRRKVLCYHGILVDKIYSKYFLPCKST 60
           MPTSAMKSVWPSSASSSSPSFLPPSFTTNSVATTRRKVLCYHGILVDKIYSKYFLPCKST
Sbjct: 1   MPTSAMKSVWPSSASSSSPSFLPPSFTTNSVATTRRKVLCYHGILVDKIYSKYFLPCKST 60

Query: 61  STGRVCKSRSLTVLSHRSEKNALCQTKISKPKVDERFDFIFGTLSSVLREWSQLRSMGVV 120
           STGRVCKSRSLTVLSHRSEKNALCQTKISKPKVDERFDFIFGTLSSVLREWSQLRSMGVV
Sbjct: 61  STGRVCKSRSLTVLSHRSEKNALCQTKISKPKVDERFDFIFGTLSSVLREWSQLRSMGVV 120

Query: 121 IILACTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETE 180
           IILACTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETE
Sbjct: 121 IILACTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETE 180

Query: 181 CQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFI 240
           CQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFI
Sbjct: 181 CQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFI 240

Query: 241 TSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILY 300
           TSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILY
Sbjct: 241 TSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILY 300

Query: 301 NHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESVVP 360
           NHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESVVP
Sbjct: 301 NHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESVVP 360

Query: 361 ELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVE 420
           ELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVE
Sbjct: 361 ELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVE 420

Query: 421 QLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESLF 480
           QLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESLF
Sbjct: 421 QLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESLF 480

Query: 481 GRALALRKLR 491
           GRALALRKLR
Sbjct: 481 GRALALRKLR 490

[Close]

BLAST of CmoCh12G009970 vs. ExPASy TrEMBL
Match: A0A6J1HRP7 (violaxanthin de-epoxidase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465513 PE=4 SV=1)

HSP 1 Score: 954.9 bits (2467), Expect = 1.3e-274
Identity = 481/490 (98.16%), Postives = 484/490 (98.78%), Query Frame = 0


Query: 1   MPTSAMKSVWPSSASSSSPSFLPPSFTTNSVATTRRKVLCYHGILVDKIYSKYFLPCKST 60
           MP SAMKSVWPSSASSSS SFLPPSFTTNSVATTRRKVLCYHGILVDKIYSKYFLPCKS 
Sbjct: 1   MPPSAMKSVWPSSASSSSASFLPPSFTTNSVATTRRKVLCYHGILVDKIYSKYFLPCKSI 60

Query: 61  STGRVCKSRSLTVLSHRSEKNALCQTKISKPKVDERFDFIFGTLSSVLREWSQLRSMGVV 120
           STGRVCKSRSLTVLSHRSEKNALCQ KISKPKVDE FDFIFGTLSSVLREWSQLRSMGVV
Sbjct: 61  STGRVCKSRSLTVLSHRSEKNALCQRKISKPKVDECFDFIFGTLSSVLREWSQLRSMGVV 120

Query: 121 IILACTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETE 180
           I+L CTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETE
Sbjct: 121 IVLTCTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETE 180

Query: 181 CQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFI 240
           CQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFI
Sbjct: 181 CQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFI 240

Query: 241 TSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILY 300
           TSGLNPTFDTFDCQLHEFHVESGKL+GNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILY
Sbjct: 241 TSGLNPTFDTFDCQLHEFHVESGKLIGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILY 300

Query: 301 NHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESVVP 360
           NHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPES+VP
Sbjct: 301 NHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVP 360

Query: 361 ELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVE 420
           ELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVE
Sbjct: 361 ELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVE 420

Query: 421 QLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESLF 480
           QLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESLF
Sbjct: 421 QLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESLF 480

Query: 481 GRALALRKLR 491
           GRALALRKLR
Sbjct: 481 GRALALRKLR 490

[Close]

BLAST of CmoCh12G009970 vs. ExPASy TrEMBL
Match: A0A0A0LHQ2 (VDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G083740 PE=4 SV=1)

HSP 1 Score: 851.7 bits (2199), Expect = 1.6e-243
Identity = 431/491 (87.78%), Postives = 456/491 (92.87%), Query Frame = 0


Query: 6   MKSVWPS--SASSSSPSFLPPSFTTNSVATTRRKVLCYHGILVDKIYSKYFLPCKSTSTG 65
           MK+VWPS  SASSSSPSF PPSFTTNS AT RRKVLCY GILVDKIYSKY   CKSTSTG
Sbjct: 1   MKTVWPSSASASSSSPSFPPPSFTTNSFATPRRKVLCYQGILVDKIYSKY--SCKSTSTG 60

Query: 66  RVCKSRSLTVLSHRSEKNALCQTKISKPKVDERFDFIFGTLSSVLREWSQLRSMGVVIIL 125
           R  KSRSL + SHR EK  LC+ KISK KVDE FDFIFG   S L+EWSQ++S+G+V+IL
Sbjct: 61  RFSKSRSLAIPSHRPEKTVLCEMKISKYKVDECFDFIFGKSLSFLQEWSQIQSVGIVVIL 120

Query: 126 ACTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETECQI 185
            CT MF+PS++AVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCN+RPDETECQI
Sbjct: 121 TCTFMFIPSAQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDETECQI 180

Query: 186 KCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSG 245
           KCGDLFENSVVDEFNECAVSRKKCVP KSDVGDFPVPDPSVLVKSFNISDFSGKWFITSG
Sbjct: 181 KCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSG 240

Query: 246 LNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHN 305
           LNPTFDTFDCQLHEFHV++GKLVGNITWRIRTPDSGFFTRST QRFVQDPE PGILYNHN
Sbjct: 241 LNPTFDTFDCQLHEFHVDNGKLVGNITWRIRTPDSGFFTRSTMQRFVQDPERPGILYNHN 300

Query: 306 NEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESVVPELE 365
           NEYLHYEDDWYILSS+VENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPES+VPELE
Sbjct: 301 NEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELE 360

Query: 366 RAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVEQL- 425
           RAA SVGRDFNKFI+TDNSCGPEPPLVERLEKTLESGE+TIVREVEQIEQEVEKEVE++ 
Sbjct: 361 RAANSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEKTIVREVEQIEQEVEKEVEEIE 420

Query: 426 ---EKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESL 485
              EKEVE VGK EMSL+EKLGEGLKELQ+DEEFFLRELSKEE+DLLNELKMEANEVE+L
Sbjct: 421 KEVEKEVERVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKMEANEVENL 480

Query: 486 FGRALALRKLR 491
           FGRALALRKLR
Sbjct: 481 FGRALALRKLR 489

[Close]

BLAST of CmoCh12G009970 vs. ExPASy TrEMBL
Match: A0A1S3B4A9 (violaxanthin de-epoxidase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485865 PE=4 SV=1)

HSP 1 Score: 851.7 bits (2199), Expect = 1.6e-243
Identity = 429/485 (88.45%), Postives = 455/485 (93.81%), Query Frame = 0


Query: 6   MKSVWPSSASSSSPSFLPPSFTTNSVATTRRKVLCYHGILVDKIYSKYFLPCKSTSTGRV 65
           MK+VWPSSASSSSPSF PPSFTTNS AT RRKVLCY GIL +KIYSKY    KSTSTGR 
Sbjct: 1   MKTVWPSSASSSSPSFPPPSFTTNSFATPRRKVLCYQGIL-EKIYSKY--SWKSTSTGRF 60

Query: 66  CKSRSLTVLSHRSEKNALCQTKISKPKVDERFDFIFGTLSSVLREWSQLRSMGVVIILAC 125
            KSRSL + SHR EK ALC+ KISK KVDE FDFIFG   S L+EWSQ++S+G+V+IL C
Sbjct: 61  SKSRSLAIPSHRPEKTALCEMKISKYKVDECFDFIFGKSLSFLQEWSQIQSVGIVVILTC 120

Query: 126 TLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKC 185
           T MF+PSS+AVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCN+RPDETECQIKC
Sbjct: 121 TFMFIPSSQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDETECQIKC 180

Query: 186 GDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLN 245
           GDLFENSVVDEFNECAVSRKKCVP KSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLN
Sbjct: 181 GDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLN 240

Query: 246 PTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNE 305
           PTFDTFDCQLHEFHV++GKLVGNITWRIRTPDSGFFTRST QRFVQDP+ PGILYNHNNE
Sbjct: 241 PTFDTFDCQLHEFHVDNGKLVGNITWRIRTPDSGFFTRSTIQRFVQDPDSPGILYNHNNE 300

Query: 306 YLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESVVPELERA 365
           YLHYEDDWYILSS+VENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPES+VPELERA
Sbjct: 301 YLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERA 360

Query: 366 AKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVEQLEKE 425
           A SVGRDFNKFI+TDNSCGPEPPLVERLEKTLESGE+TIVREVEQIEQEVEKEVE++EKE
Sbjct: 361 ANSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEKTIVREVEQIEQEVEKEVEEIEKE 420

Query: 426 VETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESLFGRALA 485
           VE VGK EMSL+EKLGEGLKELQ+DEEFFLRELSKEE+DLLNELKMEANEVE+LFGRALA
Sbjct: 421 VEKVGKTEMSLIEKLGEGLKELQQDEEFFLRELSKEEADLLNELKMEANEVENLFGRALA 480

Query: 486 LRKLR 491
           LRKLR
Sbjct: 481 LRKLR 482

[Close]

BLAST of CmoCh12G009970 vs. ExPASy TrEMBL
Match: E5FPU5 (Violaxanthin de-epoxidase OS=Cucumis sativus OX=3659 GN=VDE PE=2 SV=1)

HSP 1 Score: 850.5 bits (2196), Expect = 3.5e-243
Identity = 430/491 (87.58%), Postives = 456/491 (92.87%), Query Frame = 0


Query: 6   MKSVWPS--SASSSSPSFLPPSFTTNSVATTRRKVLCYHGILVDKIYSKYFLPCKSTSTG 65
           MK+VWPS  SASSSSPSF PPSFTTNS AT RRKVLCY GILVDKIYSKY   CKSTSTG
Sbjct: 1   MKTVWPSSASASSSSPSFPPPSFTTNSFATPRRKVLCYQGILVDKIYSKY--SCKSTSTG 60

Query: 66  RVCKSRSLTVLSHRSEKNALCQTKISKPKVDERFDFIFGTLSSVLREWSQLRSMGVVIIL 125
           R  KSRSL + SHR EK  LC+ KISK KVDE FDFIFG   S L+EWSQ++S+G+V+IL
Sbjct: 61  RFSKSRSLAIPSHRPEKTVLCEMKISKYKVDECFDFIFGKSLSFLQEWSQIQSVGIVVIL 120

Query: 126 ACTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETECQI 185
            CT MF+PS++AVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCN+RPDETECQI
Sbjct: 121 TCTFMFIPSAQAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNNRPDETECQI 180

Query: 186 KCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSG 245
           KCGDLFENSVVDEFNECAVSRKKCVP KSDVGDFPVPDPSVLVKSFNISDFSGKWFITSG
Sbjct: 181 KCGDLFENSVVDEFNECAVSRKKCVPMKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSG 240

Query: 246 LNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHN 305
           LNPTFDTFDCQLHEFHV++GKLVGNITWRIRTPDSGFFTRST QRFVQDPE PGILYNHN
Sbjct: 241 LNPTFDTFDCQLHEFHVDNGKLVGNITWRIRTPDSGFFTRSTMQRFVQDPERPGILYNHN 300

Query: 306 NEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESVVPELE 365
           NEYLHYEDDWYILSS+VENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPES+VPELE
Sbjct: 301 NEYLHYEDDWYILSSKVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELE 360

Query: 366 RAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVEQL- 425
           RAA SVGRDFNKFI+TDNSCGPEPPLVERLEKTLESGE+TIVREVEQIEQEVEKEVE++ 
Sbjct: 361 RAANSVGRDFNKFIRTDNSCGPEPPLVERLEKTLESGEKTIVREVEQIEQEVEKEVEEIE 420

Query: 426 ---EKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESL 485
              EKEVE VG+ EMSL+EKLGEGLKELQ+DEEFFLRELSKEE+DLLNELKMEANEVE+L
Sbjct: 421 KEVEKEVERVGRTEMSLIEKLGEGLKELQQDEEFFLRELSKEETDLLNELKMEANEVENL 480

Query: 486 FGRALALRKLR 491
           FGRALALRKLR
Sbjct: 481 FGRALALRKLR 489

[Close]

BLAST of CmoCh12G009970 vs. TAIR 10
Match: AT1G08550.1 (non-photochemical quenching 1 )

HSP 1 Score: 588.2 bits (1515), Expect = 6.2e-168
Identity = 284/395 (71.90%), Postives = 340/395 (86.08%), Query Frame = 0


Query: 97  FDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKC 156
           FD +     + L+E +    + +V +LAC  + VPS+ AVDALKTC CLLK CR+ELAKC
Sbjct: 75  FDIVPLPSKNELKELTAPLLLKLVGVLACAFLIVPSADAVDALKTCACLLKGCRIELAKC 134

Query: 157 ISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGD 216
           I+NP CAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSD+G+
Sbjct: 135 IANPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDLGE 194

Query: 217 FPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVE-SGKLVGNITWRIRT 276
           FP PDPSVLV++FNISDF+GKW+ITSGLNPTFD FDCQLHEFH E   KLVGNI+WRI+T
Sbjct: 195 FPAPDPSVLVQNFNISDFNGKWYITSGLNPTFDAFDCQLHEFHTEGDNKLVGNISWRIKT 254

Query: 277 PDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGR 336
            DSGFFTRS  Q+FVQDP  PG+LYNH+NEYLHY+DDWYILSS++ENKP+DYIFVYYRGR
Sbjct: 255 LDSGFFTRSAVQKFVQDPNQPGVLYNHDNEYLHYQDDWYILSSKIENKPEDYIFVYYRGR 314

Query: 337 NDAWDGYGGAVVYTRSAVLPESVVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEK 396
           NDAWDGYGGAVVYTRS+VLP S++PELE+AAKS+GRDF+ FI+TDN+CGPEP LVER+EK
Sbjct: 315 NDAWDGYGGAVVYTRSSVLPNSIIPELEKAAKSIGRDFSTFIRTDNTCGPEPALVERIEK 374

Query: 397 TLESGEQTIVREVEQIEQEVEKEVEQLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFL 456
           T+E GE+ IV+EVE+IE+EVEKEVE+       VG+ EM+L ++L EG  EL++DEE F+
Sbjct: 375 TVEEGERIIVKEVEEIEEEVEKEVEK-------VGRTEMTLFQRLAEGFNELKQDEENFV 434

Query: 457 RELSKEESDLLNELKMEANEVESLFGRALALRKLR 491
           RELSKEE + L+E+KMEA+EVE LFG+AL +RK+R
Sbjct: 435 RELSKEEMEFLDEIKMEASEVEKLFGKALPIRKVR 462

[Close]

BLAST of CmoCh12G009970 vs. TAIR 10
Match: AT1G08550.2 (non-photochemical quenching 1 )

HSP 1 Score: 588.2 bits (1515), Expect = 6.2e-168
Identity = 284/395 (71.90%), Postives = 340/395 (86.08%), Query Frame = 0


Query: 97  FDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKC 156
           FD +     + L+E +    + +V +LAC  + VPS+ AVDALKTC CLLK CR+ELAKC
Sbjct: 75  FDIVPLPSKNELKELTAPLLLKLVGVLACAFLIVPSADAVDALKTCACLLKGCRIELAKC 134

Query: 157 ISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGD 216
           I+NP CAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSD+G+
Sbjct: 135 IANPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDLGE 194

Query: 217 FPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVE-SGKLVGNITWRIRT 276
           FP PDPSVLV++FNISDF+GKW+ITSGLNPTFD FDCQLHEFH E   KLVGNI+WRI+T
Sbjct: 195 FPAPDPSVLVQNFNISDFNGKWYITSGLNPTFDAFDCQLHEFHTEGDNKLVGNISWRIKT 254

Query: 277 PDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGR 336
            DSGFFTRS  Q+FVQDP  PG+LYNH+NEYLHY+DDWYILSS++ENKP+DYIFVYYRGR
Sbjct: 255 LDSGFFTRSAVQKFVQDPNQPGVLYNHDNEYLHYQDDWYILSSKIENKPEDYIFVYYRGR 314

Query: 337 NDAWDGYGGAVVYTRSAVLPESVVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEK 396
           NDAWDGYGGAVVYTRS+VLP S++PELE+AAKS+GRDF+ FI+TDN+CGPEP LVER+EK
Sbjct: 315 NDAWDGYGGAVVYTRSSVLPNSIIPELEKAAKSIGRDFSTFIRTDNTCGPEPALVERIEK 374

Query: 397 TLESGEQTIVREVEQIEQEVEKEVEQLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFL 456
           T+E GE+ IV+EVE+IE+EVEKEVE+       VG+ EM+L ++L EG  EL++DEE F+
Sbjct: 375 TVEEGERIIVKEVEEIEEEVEKEVEK-------VGRTEMTLFQRLAEGFNELKQDEENFV 434

Query: 457 RELSKEESDLLNELKMEANEVESLFGRALALRKLR 491
           RELSKEE + L+E+KMEA+EVE LFG+AL +RK+R
Sbjct: 435 RELSKEEMEFLDEIKMEASEVEKLFGKALPIRKVR 462

[Close]

BLAST of CmoCh12G009970 vs. TAIR 10
Match: AT2G21860.1 (violaxanthin de-epoxidase-related )

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-10
Identity = 62/278 (22.30%), Postives = 101/278 (36.33%), Query Frame = 0


Query: 141 TCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNEC 200
           T +C++K C  ++  C+ +P C   + CL  C+  P +  C  +C   +E    + F+ C
Sbjct: 237 TLSCMVKNCGPQILNCLLDPNCRKALQCLNQCS--PVDQVCSYRCIASYEGPYFEAFSLC 296

Query: 201 AVSRKKCVPTKSDVGDFPVPDPSVLVKSFN-------------ISDFSGKWFITSGLNPT 260
            + +  C+   + + + P   P    +                + +    W + +G NP 
Sbjct: 297 VLQKHNCLELDAKIPEKPYVPPMTSFRGKELCHDTAEDLFVGWLGELEWSWRVVAGQNPA 356

Query: 261 FDTFDCQLHEFHVESGK-------------LVGNITWRIRTPDSGFFTRSTTQRFVQDPE 320
           +D F CQ   F+   GK             L   + WR R           T RF     
Sbjct: 357 YDQFPCQYQLFYRGKGKSSFWYEPVFQVRTLEEKLVWRRRRYSVKRGKIPATFRF----- 416

Query: 321 HPGILYNH--NNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSA 380
              +L N   +NE+      W I+   V +     +F Y+     A   Y GAV+ T   
Sbjct: 417 --SVLDNGVVSNEF------WTIV--DVSDDLSWGLFHYHGAARVAGQSYTGAVLVTPDG 476

Query: 381 VLP-ESVVPELERAAKSVGRDFNKFIKTDNSCGPEPPL 390
             P E     L+ A +  G    +    DN     PPL
Sbjct: 477 SYPAEKDKERLQSALEKCGIKEWELFAVDNCSCENPPL 497

The following BLAST results are available for this feature:

BLAST of CmoCh12G009970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SM43	9.3e-169	72.92	Violaxanthin de-epoxidase, chloroplastic OS=Spinacia oleracea OX=3562 GN=VDE1 PE...	[more]
Q40251	3.5e-168	68.40	Violaxanthin de-epoxidase, chloroplastic OS=Lactuca sativa OX=4236 GN=VDE1 PE=1 ...	[more]
Q40593	3.0e-167	66.74	Violaxanthin de-epoxidase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=VDE1 PE...	[more]
Q39249	8.7e-167	71.90	Violaxanthin de-epoxidase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VDE1...	[more]

BLAST of CmoCh12G009970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FAS6	2.3e-279	100.00	violaxanthin de-epoxidase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1HRP7	1.3e-274	98.16	violaxanthin de-epoxidase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A0A0LHQ2	1.6e-243	87.78	VDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G083740 PE=4 SV...	[more]
A0A1S3B4A9	1.6e-243	88.45	violaxanthin de-epoxidase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485865...	[more]
E5FPU5	3.5e-243	87.58	Violaxanthin de-epoxidase OS=Cucumis sativus OX=3659 GN=VDE PE=2 SV=1	[more]

BLAST of CmoCh12G009970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08550.1	6.2e-168	71.90	non-photochemical quenching 1	[more]
AT1G08550.2	6.2e-168	71.90	non-photochemical quenching 1	[more]
AT2G21860.1	2.4e-10	22.30	violaxanthin de-epoxidase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 390..432
None	No IPR available	COILS	Coil	Coil	coord: 444..479
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR33970:SF1	VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC	coord: 12..490
None	No IPR available	CDD	cd19420	lipocalin_VDE	coord: 213..388 e-value: 4.42309E-123 score: 354.921
IPR010788	VDE lipocalin domain	PFAM	PF07137	VDE	coord: 141..381 e-value: 2.1E-103 score: 345.0
IPR012674	Calycin	GENE3D	2.40.128.20		coord: 212..394 e-value: 6.5E-78 score: 262.7
IPR012674	Calycin	SUPERFAMILY	50814	Lipocalins	coord: 218..388
IPR044682	Violaxanthin de-epoxidase	PANTHER	PTHR33970	VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED	coord: 12..490
IPR022272	Lipocalin family conserved site	PROSITE	PS00213	LIPOCALIN	coord: 230..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G009970.1	CmoCh12G009970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0010028	xanthophyll cycle
molecular_function	GO:0046422	violaxanthin de-epoxidase activity