CmoCh12G009730 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G009730
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	splicing factor 3B subunit 2-like
Location	Cmo_Chr12: 9070010 .. 9075886 (+)
RNA-Seq Expression	CmoCh12G009730
Synteny	CmoCh12G009730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAAAAATAGGATATTTAAGTAAGTATTTGACGTAATTTCGGGAATCCCTTTCTTCTTCTTCTCTTCTTCTGTTCTTCGTTCTCATAGTCGTGTCCGCGGTTTGGTTTCTGATTGATTTGTGGGAAGCTTGAATCCCAGCATGACGGCGGAGGTGATTTCTCAGCCGAATGGAGTTGTCGCGAATGGTGGTGATTTCGACCTTAATTCTAACCCTAAATCTGGCGCCGCCAAGAAATCGCGGGAAAGTGAACGACGTCGTCGTCGGCGAAAGCAGAAGAAGAACCAGAAGGCTTCTAAGGTGAAGGAGGCTGCTGGTGGAGAGGATAGTGATGCTTCTGGTGATGACACAAAGGAGAACGATGATCTACTCCAGGTTTTTGGTTTTTTATTTTTATTTTTATTTTACGTTGTGGACATGTTCGTCGGTTTGTGGTTTTAGGGATACATTTTCTCAATGCTTCGGTATTGTTGGCTAGCAGTAGTTTTTGGTACGAAGATTGAACTAGATAGGTAGAATGTGTGGGTTGTCATGTGGGACGGAGCTTGATGTCTAAGAAATCTATCATTTTCAACCATTAGAAGGGGATTTAAGTTGAAATTAAGACGATACCCTCTGTGAGTTAGTATAGTAAGCAAGTAGCACCAAGAAATCTATCATTTTCAACCATTAGAAGGGGATTTAAGTTGATATTTCTGCCTGGATTTTGTTTAAGAACAATTAATTTAACTTAATTTTGATTGTTGGATAGCAAAAACATACATGGGTCTATTCCCTCTTCTTCTTCTTTGCTTCATTTTTTTATTATAAGAAACTAAATTTTCATTTGAGAAAAAAATTAAAAAAAAAAAAACAAGGGTATAAAGAAAACGAAGCCCACAAAATGAACTCGATCAAAAGAAAAGGGTTCCAATAAAGTAAAATGATACGAAACGAATAGTTACAAAAGACCTTAGAAACCGATGCCTAAAGGGAAACATAGAACCTGATAAAGGTCCAAACATCACTATGGAATCTTTTGATTCTCTGAAGATTTTATTATTCTTCTCACCTCACAAATCCCAAATCCTTGCTTCATTTCATATAGTTAAATGATTTTTTTAATGTTAACTAACCATTCATAACGCATTTGTTTGCTTTTGAAATTATAGGTTGTTGAGAAAGTAGAAATTGAATATGTACCTGAGAAGGCTGAATTAGATGATAGCTTGGACGAAGAATTTAGAAGAGTTTTTGAGAAATTCAATTTCAGTGATGTAGCTGGTGTTGAGGTAAGTATAAGCTTGCCAGAATAATTTTAGTTATCAATTCAATTTCTTCTGTGTCCAATCCTCTGAACTTTCTGGTTGATATTTCTACATAGGAGAATGAAAACAAAGATGAGTCTGCCCAAAATGCAGCATCTAAGAAGTCGGACTCAGATTCTGATGATGAAGAACTTGATAACCAGCAAAAGGAAAAAGGAGGCTTATCAAACAAGAAAAAGAAGGTAATAGGCTATTATCTTATACATATAAATAACGCTTTGGTTACTACTTGCCACAATGATCTGAAAGTAAATTGTTTTTGTCATTTTTCAGTTGCAACGGCGTATGAAGATTGCAGAACTGAAGCAGATTTGTTTGAGACCCGATGTTGTTGAGGTAGAAATGGACACGTTGCACTTTTCTTTTACCTTAAAAAATCATCATAAAAACCTGACACCAGAGTGTCTGGCTACATTTTCTAGTTATGGCATTCTTATGTGCTAATTTATTTACTGTTCAGATATGGGATGCAACTGCAGCTGATCCCAAGTTACTTGTTTATCTAAAATCTTATCGCAACACAGTTCCTGTGCCAAGGCATTGGTGTCAGAAAAGGAAATTTTTACAGGTCAGTAATTCCACTAATATTAAATTTACAGAATATACGTCTATGTACAATTGATGGGTATGTTAAACACGAGGGAATGAGAGAGTTGAGTGAGGGAAGATCGTGTTGATAAGGTTTCTCTTATGTATACATATCTGGTTCTTGCAGGGGTGTGGCTGTGACACTGTTGGAGCCGGAACTTGTAGGTGTTTGCTAAGAGCACCCTTGTATTATTTCTGTTTTAGTATATTTGGTGGTGTGGGTTGGGATGTGAACATTTTTATGTTGCATTGATGGGCGGGTTTACTTGTGTATTGCATGATTCTTTTTCTTATATATATATATCTACATCAAATCAATAATCAGTCTGCTTTGAAGTTTTAGATGCCTTTCTGTTATTAGTGACCCTGCATTCTATAATTCTAGTGATGAAATAATATCTTAGTTTAGATTGCATCTTATTGGTAGTTGGATTTATTTTGTAGGGGAAGCGTGGTATTGAAAAACAGCCATTCCAACTTCCAGATTTTATTGCAGCAACAGGAATTGAGAAGATTAGACAGGTTGCTTTCACCAATTTCTAGTTCTTGTTATGCTGGCAAAATCTTGTAGTCAGTCTCAATTTATTTCTATACTCATGTTAGACCCAATGTGATGCCTGACACTGCCAATTCTCTATTATATTTGTTATGCAGGCCTACATAGAAAAAGAGGATAGTAAGAAGTTGAAGCAAAAGCAAAGAGAACGAATGCAGCCAAAGATGGGAAAAATGGATATTGATTATCAGGTTTTTACTGCCTTCTGATTTTGATTTGATGTATATTTCGATACTCGTGTTCTGCTGCTAGGTGTCTGTGTTGTTGTGACCAGAACGTGAACATTCTAAGTTATTGAATTGGCTCTTGTGCACTAGGTTCTTCATGATGCTTTTTTCAAGTACCAAACGAAGCCAAAGCTGACAACACTTGGAGATCTGTACTATGAAGGGAAAGAATTCGAGGTATTGGGTTGTTACTATTATTTATCAACGATGCTCTTTGGTCTCTAGGACCAGTGCATCTGGGTGTTTTTCATGCATTAAGATATTGTTTGGGCCAGTGTGCATTTTAAGTTTATAAAGAAGAAGCTGGTACAGAAGTAGCTATTTGTTCAGATACTGAGTAGTTAATCCTAATGGAGATTTCTTCCTTCCTCACTTATTTGTTCCTCGGTGTACAGGTTAAGTTAAGGGAGATGAAACCCGGCATGCTATCACAAGAACTCAAAGAAGCACTTGGTATGCCAGAGGGCGCTCCTCCCCCATGGCTCATTAACATGCAGGTTGGACAGTTAAATTTATCGTCAAACTCAAATCTGATCTCATGTTTTCTTAAGGCTGTTTATTCGCGATCTTATAAATTATATTTTCCTTTCATAGAGATACGGTCCTCCACCATCCTACCCAGATCTAAAAATTCCAGGACTCAATGCTCCCATTCCACCTGGAGCTAGCTTTGGTTACCATCCTGGTGGCTGGGGAAAGCCTCCCGTCGATGAAGTATGTATTTGACTGTCGTATTCTATCTTCAGGTTAACGTCTGTCTTCTAAATCTTACCATTGTTCTCTGTTTTTATGGATAGTATGGCCGTCCACTGTATGGAGATGTGTTTGGTGTTCAGCAGCAGGAGCAAGCTAACTACGAGGTATCTTATTTATTTGTCTAACAACAGATTGTTTATTGATTTAGTGAAGGATAGATACATGAAAAGAAAAAACTAAAATTCCCAACCTTTAAGTTCTTATAAGACTTCCTCAAACTATAGGAAAGGGGTAGAATTACATAAGTAGGTGGTGAACACCAGTCTGAAGACAGAATTTATTGAATCCAATATTTTCTCTTAGTTTCTCTACGTTTGAAATGCTTCTTTGCTGATTTCTTCTTTTTTGCTCGAATGTGATTTTTTTTTTTTTTTTATGGCAACACCTTCTGTGCCGCACTCATATTTTAAGACATTCTGTTATACTAAGTTCTTAAAAGTAGAGTAGTGTGATTCTCTCAACTTCCACTTTTGAGATTTTTGTATATGTCTGTTATTTGATTGCTTGATGCCTTGTATAGGAGGAACCCGTTGATAAGACCAAGCATTGGGGTGATTTGGAGGAAGAGGAAGAGGAAGAGGTGGAGGAGGAGGATGAGGAGGAAATTGAAGAAGAGGAAATGCAAGATGGTATTGAATCTGTGGATAGTCTATCGAGGTATGCCATCATTGCCATTTTATCTCAAGCTCAATTTTGAAATCTCTTTCTTGGTGTAATCATCTTGAATGTAATTATATGAGAAAATGAAATATTCTTGTTGGAATTCTGCAAAGGGATAAAAAGTAAAATATTCTTGAATGTTCAAATTTCCAAGGATGGGCACGATAAAGAAAAGTTAAAGATATTACATGTTATTTCCACAAGATCAAAACATATGTGGCATCTTGGATTAAGACACTTCAATTAATATGAAGGCTTTCGATATTTTTGAATGCTTCCGTCAATTTCATATACTGACTAAAATAGATTGAAGTTAAACAATTAAAACAGTATAACAAATAGATTGAATGCTTAGTTAGCCTTGTCTTAAATGCGGCTGTGGTGAGACATGCCTTTGTGGTTGTGCGTCCCAGACCTTTTGGATATCCAAACCTGATCTTTGGACTTTGTCTATGCTTCCCAGTTATTCTCCATTCTCCGGATTGATTCAGTAACGAGTTCCAATGTTTTGCTTATACCGTATACTGGACGTATGCGATTAAGCCTTTAAGCAGTTCAATAATTGACTTGTCTGTTTCATGCAGCACTCCTACTGGTGTGGAGACACCAGATGTTATTGACCTTCGGAAACAACAGAGGAAGGAACCGGACAGGCCTCTTTACCAAGTAAGTAAATAATCTCTGAATGTGACTTCATCAGAACTTGCCTTCTCTCTATTGTTTATTTCAAACTGCAATGTGATTTACTGTTCGGTTTCTTGAAGGTTCTCGAAGAAAAAGAAGAGAAGGTTGCTCCTGGGACATTGCTTGGAACTACACATACGTATGCAACTTATTCGTTTCATCTTTTTATGATAGCCATCAACTTTTCTTTCTTATTGTACTCAAATTGACACTTTGATGTGCATGTCTGTTTTCAGTTATGTTATTAGTGGCGGTACTCAAGATAAGACGGGAGCCAAAAGGGTAAGAAACTTTTTAATGGTTCGTGGTATAATATGAACTCGGTGATTATTTGTCGACAATTAGTAATAATCTTCCTTTTCATGGCTATGTATGTTCCCAGGTTGATTTGCTTAGAGGTCAAAAATCTGATAAAGTGGACGTTACTTTACGACCCGAAGAATTGGAAGCTATGGAAAATGTTCTACCTGCGAAGTATGCGACATCCACTTAGATGTGTAACTAACTAATTCATGTCATAATTGGGCTCCTAATTCTCTTTTTTTCTCTTCTCTCAGATACGAGGAAGCTAGGGAAGAGGAGAAGTTGCGGAGTCAGAGGGAGGACTTCAGCGACATGGTTGCGGAGGTGTGATTCTTTTGTTAAACGAGTCGACCGATTCGTTCTTGATACTCAACATATTAACAATTAGAACATTTATTCTTGCAGAATGAGAAGAAAAGAAAACGTAAGATGCAGGAAAAGGATGGAAAATCTAAGAAGAAAGATTTCAAGTTCTAGGCCATTTTTTGTTTCGGTAATCGAACCACTCTATCGACTACTACTACTGCCATACCGAGCTGGCTTTTGCTTTCGTTGGAGATGTCGATCTTGGTAGTATCAAGTAATGTGATATCCTATAAAACTTCCAACACTGGCTCTTCCTAAAACCACCCAGACCCCTCTTTGCAGGGTACTCTACATAGATAGTCGCATATACAGACTCTTCAATGGAAGTAGTTTGTCATATTAGTAGGTTCTGTATTCTTCGTTCTTTTCGATTCCCGAGCTTCGAAAGGGCTGCTGTTTTCGATTCCCGAGCTTCGAAAGGGCTGCTGT

mRNA sequence

TTTTAAAAATAGGATATTTAAGTAAGTATTTGACGTAATTTCGGGAATCCCTTTCTTCTTCTTCTCTTCTTCTGTTCTTCGTTCTCATAGTCGTGTCCGCGGTTTGGTTTCTGATTGATTTGTGGGAAGCTTGAATCCCAGCATGACGGCGGAGGTGATTTCTCAGCCGAATGGAGTTGTCGCGAATGGTGGTGATTTCGACCTTAATTCTAACCCTAAATCTGGCGCCGCCAAGAAATCGCGGGAAAGTGAACGACGTCGTCGTCGGCGAAAGCAGAAGAAGAACCAGAAGGCTTCTAAGGTGAAGGAGGCTGCTGGTGGAGAGGATAGTGATGCTTCTGGTGATGACACAAAGGAGAACGATGATCTACTCCAGGTTGTTGAGAAAGTAGAAATTGAATATGTACCTGAGAAGGCTGAATTAGATGATAGCTTGGACGAAGAATTTAGAAGAGTTTTTGAGAAATTCAATTTCAGTGATGTAGCTGGTGTTGAGGAGAATGAAAACAAAGATGAGTCTGCCCAAAATGCAGCATCTAAGAAGTCGGACTCAGATTCTGATGATGAAGAACTTGATAACCAGCAAAAGGAAAAAGGAGGCTTATCAAACAAGAAAAAGAAGTTGCAACGGCGTATGAAGATTGCAGAACTGAAGCAGATTTGTTTGAGACCCGATGTTGTTGAGATATGGGATGCAACTGCAGCTGATCCCAAGTTACTTGTTTATCTAAAATCTTATCGCAACACAGTTCCTGTGCCAAGGCATTGGTGTCAGAAAAGGAAATTTTTACAGGGGAAGCGTGGTATTGAAAAACAGCCATTCCAACTTCCAGATTTTATTGCAGCAACAGGAATTGAGAAGATTAGACAGGCCTACATAGAAAAAGAGGATAGTAAGAAGTTGAAGCAAAAGCAAAGAGAACGAATGCAGCCAAAGATGGGAAAAATGGATATTGATTATCAGGTTCTTCATGATGCTTTTTTCAAGTACCAAACGAAGCCAAAGCTGACAACACTTGGAGATCTGTACTATGAAGGGAAAGAATTCGAGGTTAAGTTAAGGGAGATGAAACCCGGCATGCTATCACAAGAACTCAAAGAAGCACTTGGTATGCCAGAGGGCGCTCCTCCCCCATGGCTCATTAACATGCAGAGATACGGTCCTCCACCATCCTACCCAGATCTAAAAATTCCAGGACTCAATGCTCCCATTCCACCTGGAGCTAGCTTTGGTTACCATCCTGGTGGCTGGGGAAAGCCTCCCGTCGATGAATATGGCCGTCCACTGTATGGAGATGTGTTTGGTGTTCAGCAGCAGGAGCAAGCTAACTACGAGGAGGAACCCGTTGATAAGACCAAGCATTGGGGTGATTTGGAGGAAGAGGAAGAGGAAGAGGTGGAGGAGGAGGATGAGGAGGAAATTGAAGAAGAGGAAATGCAAGATGGTATTGAATCTGTGGATAGTCTATCGAGCACTCCTACTGGTGTGGAGACACCAGATGTTATTGACCTTCGGAAACAACAGAGGAAGGAACCGGACAGGCCTCTTTACCAAGTTCTCGAAGAAAAAGAAGAGAAGGTTGCTCCTGGGACATTGCTTGGAACTACACATACTTATGTTATTAGTGGCGGTACTCAAGATAAGACGGGAGCCAAAAGGGTTGATTTGCTTAGAGGTCAAAAATCTGATAAAGTGGACGTTACTTTACGACCCGAAGAATTGGAAGCTATGGAAAATGTTCTACCTGCGAAATACGAGGAAGCTAGGGAAGAGGAGAAGTTGCGGAGTCAGAGGGAGGACTTCAGCGACATGGTTGCGGAGAATGAGAAGAAAAGAAAACGTAAGATGCAGGAAAAGGATGGAAAATCTAAGAAGAAAGATTTCAAGTTCTAGGCCATTTTTTGTTTCGGTAATCGAACCACTCTATCGACTACTACTACTGCCATACCGAGCTGGCTTTTGCTTTCGTTGGAGATGTCGATCTTGGTAGTATCAAGTAATGTGATATCCTATAAAACTTCCAACACTGGCTCTTCCTAAAACCACCCAGACCCCTCTTTGCAGGGTACTCTACATAGATAGTCGCATATACAGACTCTTCAATGGAAGTAGTTTGTCATATTAGTAGGTTCTGTATTCTTCGTTCTTTTCGATTCCCGAGCTTCGAAAGGGCTGCTGTTTTCGATTCCCGAGCTTCGAAAGGGCTGCTGT

Coding sequence (CDS)

ATGACGGCGGAGGTGATTTCTCAGCCGAATGGAGTTGTCGCGAATGGTGGTGATTTCGACCTTAATTCTAACCCTAAATCTGGCGCCGCCAAGAAATCGCGGGAAAGTGAACGACGTCGTCGTCGGCGAAAGCAGAAGAAGAACCAGAAGGCTTCTAAGGTGAAGGAGGCTGCTGGTGGAGAGGATAGTGATGCTTCTGGTGATGACACAAAGGAGAACGATGATCTACTCCAGGTTGTTGAGAAAGTAGAAATTGAATATGTACCTGAGAAGGCTGAATTAGATGATAGCTTGGACGAAGAATTTAGAAGAGTTTTTGAGAAATTCAATTTCAGTGATGTAGCTGGTGTTGAGGAGAATGAAAACAAAGATGAGTCTGCCCAAAATGCAGCATCTAAGAAGTCGGACTCAGATTCTGATGATGAAGAACTTGATAACCAGCAAAAGGAAAAAGGAGGCTTATCAAACAAGAAAAAGAAGTTGCAACGGCGTATGAAGATTGCAGAACTGAAGCAGATTTGTTTGAGACCCGATGTTGTTGAGATATGGGATGCAACTGCAGCTGATCCCAAGTTACTTGTTTATCTAAAATCTTATCGCAACACAGTTCCTGTGCCAAGGCATTGGTGTCAGAAAAGGAAATTTTTACAGGGGAAGCGTGGTATTGAAAAACAGCCATTCCAACTTCCAGATTTTATTGCAGCAACAGGAATTGAGAAGATTAGACAGGCCTACATAGAAAAAGAGGATAGTAAGAAGTTGAAGCAAAAGCAAAGAGAACGAATGCAGCCAAAGATGGGAAAAATGGATATTGATTATCAGGTTCTTCATGATGCTTTTTTCAAGTACCAAACGAAGCCAAAGCTGACAACACTTGGAGATCTGTACTATGAAGGGAAAGAATTCGAGGTTAAGTTAAGGGAGATGAAACCCGGCATGCTATCACAAGAACTCAAAGAAGCACTTGGTATGCCAGAGGGCGCTCCTCCCCCATGGCTCATTAACATGCAGAGATACGGTCCTCCACCATCCTACCCAGATCTAAAAATTCCAGGACTCAATGCTCCCATTCCACCTGGAGCTAGCTTTGGTTACCATCCTGGTGGCTGGGGAAAGCCTCCCGTCGATGAATATGGCCGTCCACTGTATGGAGATGTGTTTGGTGTTCAGCAGCAGGAGCAAGCTAACTACGAGGAGGAACCCGTTGATAAGACCAAGCATTGGGGTGATTTGGAGGAAGAGGAAGAGGAAGAGGTGGAGGAGGAGGATGAGGAGGAAATTGAAGAAGAGGAAATGCAAGATGGTATTGAATCTGTGGATAGTCTATCGAGCACTCCTACTGGTGTGGAGACACCAGATGTTATTGACCTTCGGAAACAACAGAGGAAGGAACCGGACAGGCCTCTTTACCAAGTTCTCGAAGAAAAAGAAGAGAAGGTTGCTCCTGGGACATTGCTTGGAACTACACATACTTATGTTATTAGTGGCGGTACTCAAGATAAGACGGGAGCCAAAAGGGTTGATTTGCTTAGAGGTCAAAAATCTGATAAAGTGGACGTTACTTTACGACCCGAAGAATTGGAAGCTATGGAAAATGTTCTACCTGCGAAATACGAGGAAGCTAGGGAAGAGGAGAAGTTGCGGAGTCAGAGGGAGGACTTCAGCGACATGGTTGCGGAGAATGAGAAGAAAAGAAAACGTAAGATGCAGGAAAAGGATGGAAAATCTAAGAAGAAAGATTTCAAGTTCTAG

Protein sequence

MTAEVISQPNGVVANGGDFDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAGGEDSDASGDDTKENDDLLQVVEKVEIEYVPEKAELDDSLDEEFRRVFEKFNFSDVAGVEENENKDESAQNAASKKSDSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVVEIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEEDEEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEKVAPGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEAREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF

Homology

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BLAST of CmoCh12G009730 vs. ExPASy Swiss-Prot
Match: Q13435 (Splicing factor 3B subunit 2 OS=Homo sapiens OX=9606 GN=SF3B2 PE=1 SV=2)

HSP 1 Score: 442.6 bits (1137), Expect = 7.0e-123
Identity = 292/586 (49.83%), Postives = 380/586 (64.85%), Query Frame = 0


Query: 35  ESERRRRRRKQKKNQKASKVKEAAGGEDSDASGDDTKENDDLLQVVEKVEIEYVPEKAEL 94
           + E+ R+RR +KK +K  +V+  +     D   D T+         + VEIEYV E+ E+
Sbjct: 320 KKEKNRKRRNRKKKKKPQRVRGVSSESSGDREKDSTRSRGSDSPAAD-VEIEYVTEEPEI 379

Query: 95  DDSLDEEFRRVFEKFNFSDVAGVE---ENENKDESAQNAASKK-----SDSDSDDEELDN 154
            +     F+R+FE F  +D    E   E E  D+   +AA KK        DSDD+  D+
Sbjct: 380 YEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPKKKGFEEEHKDSDDDSSDD 439

Query: 155 QQKEK---GGLSNKKKKLQRRMKIAELKQICLRPDVVEIWDATAADPKLLVYLKSYRNTV 214
           +Q++K     LS KK +   R  +AELKQ+  RPDVVE+ D TA DPKLLV+LK+ RN+V
Sbjct: 440 EQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDVTAQDPKLLVHLKATRNSV 499

Query: 215 PVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQ 274
           PVPRHWC KRK+LQGKRGIEK PF+LPDFI  TGI+++R+A  EKE+ K +K K RE+++
Sbjct: 500 PVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREALQEKEEQKTMKSKMREKVR 559

Query: 275 PKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFEVKLREMKPGMLSQELKEALG 334
           PKMGK+DIDYQ LHDAFFK+QTKPKLT  GDLYYEGKEFE +L+E KPG LS EL+ +LG
Sbjct: 560 PKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRISLG 619

Query: 335 MPEG-----APPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASFGYHPGGWGKPPVDEY 394
           MP G      PPPWLI MQRYGPPPSYP+LKIPGLN+PIP   SFGYH GGWGKPPVDE 
Sbjct: 620 MPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPESCSFGYHAGGWGKPPVDET 679

Query: 395 GRPLYGDVFGVQQQE-QANYEEEPVDKTKHWGDLEEEEEEEVEEEDEEEIEEEEMQD--- 454
           G+PLYGDVFG    E Q   EEE +D+T  WG+LE  +EE  EEE+EEE +E++  +   
Sbjct: 680 GKPLYGDVFGTNAAEFQTKTEEEEIDRTP-WGELEPSDEESSEEEEEEESDEDKPDETGF 739

Query: 455 ------GIESVDSLSSTPTGVETPDVIDLRKQQRKE----PDRP-LYQVLEEKEEKVAPG 514
                 G+ +    SS P G+ETP++I+LRK++ +E     + P L+ VL EK      G
Sbjct: 740 ITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSETPQLFTVLPEKRTATVGG 799

Query: 515 TLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 574
            ++G+TH Y +S     K  A     L+G     V+V L PEELE     +  KYEE   
Sbjct: 800 AMMGSTHIYDMSTVMSRKGPAPE---LQG-----VEVALAPEELELDPMAMTQKYEEHVR 859

Query: 575 EEKLRSQREDFSDMVAEN---EKKRKRKMQEKD---GKSKKKDFKF 584
           E++ + ++EDFSDMVAE+   +K++KRK Q +D   G  K K+FKF
Sbjct: 860 EQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF 895

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BLAST of CmoCh12G009730 vs. ExPASy Swiss-Prot
Match: Q9UUI3 (Pre-mRNA-splicing factor sap145 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sap145 PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 8.6e-89
Identity = 242/568 (42.61%), Postives = 332/568 (58.45%), Query Frame = 0


Query: 31  KKSRESERRRRRR--KQKKNQKASKVKEAAGGEDSDASGDDTKEND----------DLLQ 90
           KKSR   RR +++  ++K N  A   ++ +  +D     +D   ND          +   
Sbjct: 43  KKSRNQVRREKKKLLREKTNSGAKLAEKNSDDKDQLTENNDNLYNDKKSNGNFYDTNKTD 102

Query: 91  VVEKVEIEYVPEKAELD--DSLDEEFRRVFEKFNFSDVAGVEEN-ENKDESAQNAASKKS 150
            V+ +    + +  ELD  D L E+F+ VF +F      G E++ E+ D+     +  + 
Sbjct: 103 SVDGMVYTTIVDSVELDPNDPLIEQFKDVFNRFK---ADGQEKDFEDTDKGQIMYSDDEI 162

Query: 151 DSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVVEIWDATAADPKLLVY 210
            S+ +++ L  QQ+EK  LS KK +  +RM +A+LK +  + DVVE WD ++ DP  L +
Sbjct: 163 LSEGEEDALQKQQEEK--LSKKKLRKLKRMTVAQLKMLSEKADVVEWWDVSSLDPLFLTH 222

Query: 211 LKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLK 270
           LK+Y NTVPVPRHW QKR +L G+RGIE+Q F+LP +I ATGI ++R A  E E    L+
Sbjct: 223 LKAYPNTVPVPRHWNQKRDYLSGQRGIERQLFELPSYIRATGIVQMRNAVHENEADMPLR 282

Query: 271 QKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFEVKLREMKPGMLS 330
           QK RER+QPKMGK+DIDYQ LHDAFF+YQTKP LT  G+ Y+EGKE E  ++E +PG +S
Sbjct: 283 QKMRERVQPKMGKLDIDYQKLHDAFFRYQTKPVLTGFGECYFEGKELEADVKEKRPGDIS 342

Query: 331 QELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASFGYHPGGWGKPPV 390
           +EL+EALG+  GAPPPWL  MQRYGPPPSYPDLKIPG+N PIP GA +G+HPGGWGKPPV
Sbjct: 343 EELREALGIAPGAPPPWLFAMQRYGPPPSYPDLKIPGVNCPIPTGAQWGFHPGGWGKPPV 402

Query: 391 DEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEEDE--------EEI 450
           D++ RPLYGDVFG  +         PV  T+HWG+LEE EEEE  EE+E        EEI
Sbjct: 403 DQFNRPLYGDVFGNVKPRIHAGTGSPV-STQHWGELEEFEEEESSEEEESEDVEYPTEEI 462

Query: 451 EEEEMQDGIESV-------DSLSSTP------TGVETPDVIDLRKQQRKEPD---RPLYQ 510
            E E  +  +S        + L + P      + VE  D ++LRK  +   D   R LYQ
Sbjct: 463 TERETIEEYQSASEPRSQREDLHAEPLTYFNQSNVEV-DNVELRKNTQPSSDAANRDLYQ 522

Query: 511 VLEEKEEKVAPGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLR-----PEE 555
           VL EK   ++    +G  H Y I    +D    KR        ++K DV L       +E
Sbjct: 523 VLPEKSTNIS--GFMGPQHQYDIP-TAEDTLPQKRNAHSMLSSTNKGDVALNQSSNWQDE 582

[Close]

BLAST of CmoCh12G009730 vs. ExPASy Swiss-Prot
Match: Q02554 (Cold sensitive U2 snRNA suppressor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CUS1 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 7.0e-30
Identity = 121/403 (30.02%), Postives = 199/403 (49.38%), Query Frame = 0


Query: 94  LDDSLDEEFRRVFEKFNF------SDVAGVEENENKDESAQNAASKKSDSDSDDEELDNQ 153
           +D  L++EF+ V ++F         ++   E+N +     +N    +  +  D+ E    
Sbjct: 55  VDAKLEKEFKDVLQRFQVQENDTPKEITKDEKNNHVVIVEKNPVMNRKHTAEDELEDTPS 114

Query: 154 QKEKGGLSNKKKKLQRRMKIAELKQICLRPDVVEIWDATAADPKLLVYLKSYRNTVPVPR 213
              +  LS +K++   +  +++LK     P ++E +D  A  P LL  +K  +N +PVP 
Sbjct: 115 DGIEEHLSARKRRKTEKPSLSQLKSQVPYPQIIEWYDCDARYPGLLASIKCTKNVIPVPS 174

Query: 214 HWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIR----QAYIEKEDSKKLKQKQRERMQ 273
           HW  K+++L G+  + K+PF+LPD I  T IE++R    Q+ ++ +D K LK+  R R+Q
Sbjct: 175 HWQSKKEYLSGRSLLGKRPFELPDIIKKTNIEQMRSTLPQSGLDGQDEKSLKEASRARVQ 234

Query: 274 PKMGKMDIDYQVLHDAFFKYQTKPK---LTTLGDLYYEGKEF--EVKLREM----KPGML 333
           PKMG +D+DY+ LHD FFK     K   L   GD+YYE +    E   + M    +PG +
Sbjct: 235 PKMGALDLDYKKLHDVFFKIGANWKPDHLLCFGDVYYENRNLFEETNWKRMVDHKRPGRI 294

Query: 334 SQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIP--PGASFG-YHPGGWG 393
           SQEL+  + +PEG  PPW + M+  G P  YPDLKI GLN  I    G  +G   P    
Sbjct: 295 SQELRAIMNLPEGQLPPWCMKMKDIGLPTGYPDLKIAGLNWDITNLKGDVYGKIIPNHHS 354

Query: 394 KPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEEDEEEIEEEE 453
           +    + GR  +G +   +  E  N +E+            E   ++ + +DE E + + 
Sbjct: 355 RS--KKQGRNYFGALISFETPEFENSKEDTQANA-------ENGRQDDKIDDEVEHKLDH 414

Query: 454 MQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLE 475
            Q+ I  V S              +  ++  +E ++ LY VL+
Sbjct: 415 FQEDISEVTSAE------------EKLERNEEESEKQLYTVLK 436

[Close]

BLAST of CmoCh12G009730 vs. ExPASy TrEMBL
Match: A0A6J1FHL4 (splicing factor 3B subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444220 PE=4 SV=1)

HSP 1 Score: 1091.3 bits (2821), Expect = 0.0e+00
Identity = 583/583 (100.00%), Postives = 583/583 (100.00%), Query Frame = 0


Query: 1   MTAEVISQPNGVVANGGDFDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAGG 60
           MTAEVISQPNGVVANGGDFDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAGG
Sbjct: 1   MTAEVISQPNGVVANGGDFDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAGG 60

Query: 61  EDSDASGDDTKENDDLLQVVEKVEIEYVPEKAELDDSLDEEFRRVFEKFNFSDVAGVEEN 120
           EDSDASGDDTKENDDLLQVVEKVEIEYVPEKAELDDSLDEEFRRVFEKFNFSDVAGVEEN
Sbjct: 61  EDSDASGDDTKENDDLLQVVEKVEIEYVPEKAELDDSLDEEFRRVFEKFNFSDVAGVEEN 120

Query: 121 ENKDESAQNAASKKSDSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVV 180
           ENKDESAQNAASKKSDSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVV
Sbjct: 121 ENKDESAQNAASKKSDSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVV 180

Query: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240
           EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK
Sbjct: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240

Query: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300
           IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK
Sbjct: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300

Query: 301 EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360
           EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG
Sbjct: 301 EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360

Query: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE 420
           ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE
Sbjct: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE 420

Query: 421 EEDEEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEKV 480
           EEDEEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEKV
Sbjct: 421 EEDEEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEKV 480

Query: 481 APGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE 540
           APGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE
Sbjct: 481 APGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE 540

Query: 541 AREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF 584
           AREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF
Sbjct: 541 AREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF 583

[Close]

BLAST of CmoCh12G009730 vs. ExPASy TrEMBL
Match: A0A6J1HNQ5 (splicing factor 3B subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465353 PE=4 SV=1)

HSP 1 Score: 1053.5 bits (2723), Expect = 3.2e-304
Identity = 569/583 (97.60%), Postives = 571/583 (97.94%), Query Frame = 0


Query: 1   MTAEVISQPNGVVANGGDFDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAGG 60
           MTAEVISQPNGVV NGG  DLN NPKSGAAKKSRESERRRRRRK KKNQK  K +EAA G
Sbjct: 1   MTAEVISQPNGVVVNGGGLDLNFNPKSGAAKKSRESERRRRRRK-KKNQK--KNQEAAAG 60

Query: 61  EDSDASGDDTKENDDLLQVVEKVEIEYVPEKAELDDSLDEEFRRVFEKFNFSDVAGVEEN 120
           EDSDASGDDTKENDDLLQVVEKVEIEY+PEKAELDDSLDEEFRRVFEKFNFSDVAG EEN
Sbjct: 61  EDSDASGDDTKENDDLLQVVEKVEIEYIPEKAELDDSLDEEFRRVFEKFNFSDVAGAEEN 120

Query: 121 ENKDESAQNAASKKSDSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVV 180
           ENKDESAQNAASKKSDSDSDDEELD QQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVV
Sbjct: 121 ENKDESAQNAASKKSDSDSDDEELDIQQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVV 180

Query: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240
           EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK
Sbjct: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240

Query: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300
           IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK
Sbjct: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300

Query: 301 EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360
           EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG
Sbjct: 301 EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360

Query: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE 420
           ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE
Sbjct: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE 420

Query: 421 EEDEEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEKV 480
           EEDEEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDR LYQVLEEKEEKV
Sbjct: 421 EEDEEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRSLYQVLEEKEEKV 480

Query: 481 APGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE 540
           APGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE
Sbjct: 481 APGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE 540

Query: 541 AREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF 584
           AREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF
Sbjct: 541 AREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF 580

[Close]

BLAST of CmoCh12G009730 vs. ExPASy TrEMBL
Match: A0A1S3B4C3 (splicing factor 3B subunit 2 OS=Cucumis melo OX=3656 GN=LOC103485870 PE=4 SV=1)

HSP 1 Score: 1042.7 bits (2695), Expect = 5.6e-301
Identity = 562/583 (96.40%), Postives = 571/583 (97.94%), Query Frame = 0


Query: 1   MTAEVISQPNGVVANGGDFDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAGG 60
           MT EV SQPNGVV+N GD DLNSNPKSGA KKSRESERRRRRRKQKKNQKASKVKEAAGG
Sbjct: 1   MTVEV-SQPNGVVSN-GDLDLNSNPKSGAVKKSRESERRRRRRKQKKNQKASKVKEAAGG 60

Query: 61  EDSDASGDDTKENDDLLQVVEKVEIEYVPEKAELDDSLDEEFRRVFEKFNFSDVAGVEEN 120
           +DSDASGDDTKENDD LQVVEKVEIEYVPEKAELDDSLDE+FR+VFEKF FS+VAG EEN
Sbjct: 61  DDSDASGDDTKENDDPLQVVEKVEIEYVPEKAELDDSLDEDFRKVFEKFTFSEVAGAEEN 120

Query: 121 ENKDESAQNAASKKSDSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVV 180
           ENKDESAQNA SKKSDSDSDDEELDNQQKEK GLSNKKKKLQRRMKIAELKQIC RPDVV
Sbjct: 121 ENKDESAQNATSKKSDSDSDDEELDNQQKEK-GLSNKKKKLQRRMKIAELKQICSRPDVV 180

Query: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240
           EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK
Sbjct: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240

Query: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300
           IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK
Sbjct: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300

Query: 301 EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360
           EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG
Sbjct: 301 EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360

Query: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE 420
           ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE
Sbjct: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE 420

Query: 421 EEDEEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEKV 480
           EEDEEE+EEEEM+DGIESVDS SSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEE+V
Sbjct: 421 EEDEEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERV 480

Query: 481 APGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE 540
           APGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE
Sbjct: 481 APGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE 540

Query: 541 AREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF 584
           AREEEKLRSQREDFSDMVAENEKKRKRKMQEK+GKSKKKDFKF
Sbjct: 541 AREEEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 580

[Close]

BLAST of CmoCh12G009730 vs. ExPASy TrEMBL
Match: A0A0A0LMT1 (PSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G075450 PE=4 SV=1)

HSP 1 Score: 1036.6 bits (2679), Expect = 4.0e-299
Identity = 558/583 (95.71%), Postives = 571/583 (97.94%), Query Frame = 0


Query: 1   MTAEVISQPNGVVANGGDFDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAGG 60
           MT EV SQPNGVV+N GD DLNSNPKSGA KKSRE+ERRRRRRKQKKNQKASKVKEAAGG
Sbjct: 1   MTVEV-SQPNGVVSN-GDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGG 60

Query: 61  EDSDASGDDTKENDDLLQVVEKVEIEYVPEKAELDDSLDEEFRRVFEKFNFSDVAGVEEN 120
           EDSDASGDDTKENDD LQVVEKVEIEY+PEKAELDDSLDE+FR+VFEKF+FS+VAG EEN
Sbjct: 61  EDSDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEEN 120

Query: 121 ENKDESAQNAASKKSDSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVV 180
           E+KDESAQNA SKKSDSDSDDEE DNQQKEK GLSNKKKKLQRRMKIAELKQIC RPDVV
Sbjct: 121 EDKDESAQNATSKKSDSDSDDEEHDNQQKEK-GLSNKKKKLQRRMKIAELKQICSRPDVV 180

Query: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240
           EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK
Sbjct: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240

Query: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300
           IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK
Sbjct: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300

Query: 301 EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360
           EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG
Sbjct: 301 EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360

Query: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE 420
           ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE
Sbjct: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE 420

Query: 421 EEDEEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEKV 480
           EEDEEE+EEEEM+DGIESVDS SSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEE+V
Sbjct: 421 EEDEEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERV 480

Query: 481 APGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE 540
           APGTLLGT+HTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE
Sbjct: 481 APGTLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE 540

Query: 541 AREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF 584
           AREEEKLRSQREDFSDMVAENEKKRKRKMQEK+GKSKKKDFKF
Sbjct: 541 AREEEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 580

[Close]

BLAST of CmoCh12G009730 vs. ExPASy TrEMBL
Match: A0A6J1EV51 (splicing factor 3B subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111436228 PE=4 SV=1)

HSP 1 Score: 1034.2 bits (2673), Expect = 2.0e-298
Identity = 563/584 (96.40%), Postives = 572/584 (97.95%), Query Frame = 0


Query: 1   MTAEVISQPNGVVANGGDFDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAGG 60
           MTAEV SQ NGVV+N GD DLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKV EA  G
Sbjct: 1   MTAEV-SQSNGVVSN-GDLDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKV-EATAG 60

Query: 61  EDSDASGDDTKENDDLLQVVEKVEIEYVPEKAELDDSLDEEFRRVFEKFNFSDVAGVEEN 120
           EDSDASGDDTKEND+ LQVVEKVEIEYVPEKAELDDSLDEEFR+VFEKF+FS++AG EEN
Sbjct: 61  EDSDASGDDTKENDNPLQVVEKVEIEYVPEKAELDDSLDEEFRKVFEKFSFSEIAGTEEN 120

Query: 121 ENKDESAQNAASKKSDSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVV 180
           ENKDESAQNAASKKSDSDSDDEELDNQQKEK GLSNKKKKLQRRMKIAELKQICLRPDVV
Sbjct: 121 ENKDESAQNAASKKSDSDSDDEELDNQQKEK-GLSNKKKKLQRRMKIAELKQICLRPDVV 180

Query: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240
           EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK
Sbjct: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240

Query: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300
           IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK
Sbjct: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300

Query: 301 EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360
           EFEVKLREMKPGMLS ELKEALGMP+GAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG
Sbjct: 301 EFEVKLREMKPGMLSHELKEALGMPDGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360

Query: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEV- 420
           ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEV 
Sbjct: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE 420

Query: 421 EEEDEEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEK 480
           EEEDEEE+EEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEK
Sbjct: 421 EEEDEEELEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEK 480

Query: 481 VAPGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYE 540
           VAPGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQK+DKVDVTLRPEELEAMENVLPAKYE
Sbjct: 481 VAPGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKTDKVDVTLRPEELEAMENVLPAKYE 540

Query: 541 EAREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF 584
           EAREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF
Sbjct: 541 EAREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF 580

[Close]

BLAST of CmoCh12G009730 vs. TAIR 10
Match: AT4G21660.1 (proline-rich spliceosome-associated (PSP) family protein )

HSP 1 Score: 791.6 bits (2043), Expect = 4.4e-229
Identity = 441/591 (74.62%), Postives = 502/591 (84.94%), Query Frame = 0


Query: 1   MTAE-VISQPNGVVANGGDFDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAG 60
           MTA+  ++  + VV+NG   D+++   S ++KKSRE +RRRRRRKQKKN KAS+    A 
Sbjct: 1   MTADSTVALVHSVVSNG---DVSNGNTSASSKKSREIDRRRRRRKQKKNNKASQADVDA- 60

Query: 61  GEDSDASGDDTKENDDLLQVVEKVEIEYVPEKAELDDSLDEEFRRVFEKFNFSDVAGVEE 120
             D  A+ +  +  D   QV E++ IEYVPE+AE +D  ++EF+ +FEKFNF +    EE
Sbjct: 61  -SDVSAASESKENTDPQPQVCEQIVIEYVPEQAEFEDGFNDEFKEIFEKFNFREPLASEE 120

Query: 121 NENKDESAQNAASKK---SDSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLR 180
           +  KDES +    KK   SDSDSDD+E DNQ KEK G+SNKKKKLQRRMKIAELKQ+  R
Sbjct: 121 DGTKDESEEKEDVKKKVNSDSDSDDDEQDNQNKEK-GISNKKKKLQRRMKIAELKQVSAR 180

Query: 181 PDVVEIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAAT 240
           PDVVE+WDAT+ADPKLLV+LKSYRNTVPVPRHW QKRK+LQGKRGIEKQPF LPDFIAAT
Sbjct: 181 PDVVEVWDATSADPKLLVFLKSYRNTVPVPRHWSQKRKYLQGKRGIEKQPFHLPDFIAAT 240

Query: 241 GIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLY 300
           GIEKIRQAYIEKED KKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKL+ LGDLY
Sbjct: 241 GIEKIRQAYIEKEDGKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLSALGDLY 300

Query: 301 YEGKEFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAP 360
           +EGKEFEVKLRE KPG LS +LKEALGMPEGAPPPWLINMQRYGPPPSYP LKIPGLNAP
Sbjct: 301 FEGKEFEVKLRETKPGFLSNDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAP 360

Query: 361 IPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEE 420
           IP GASFG+H GGWGKPPVDEYGRPLYGDVFGVQQQ+Q NYEEEP+DK+KHWGDLEEEEE
Sbjct: 361 IPIGASFGFHAGGWGKPPVDEYGRPLYGDVFGVQQQDQPNYEEEPIDKSKHWGDLEEEEE 420

Query: 421 EEVEEED--EEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLE 480
           EE EEE+  EEE++EEE++DG ESVD+LSSTPTG+ETPD I+LRK QRKEPDR LYQVLE
Sbjct: 421 EEEEEEEEQEEEMDEEELEDGTESVDTLSSTPTGIETPDAIELRKDQRKEPDRALYQVLE 480

Query: 481 EKEEKVAPGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVL 540
           EK E VAPGTLLGT+HTYVI  GTQ+KTGAKRVDLLRGQK+D+VDV+L+PEEL+AMENVL
Sbjct: 481 EKGESVAPGTLLGTSHTYVIKTGTQEKTGAKRVDLLRGQKTDRVDVSLQPEELDAMENVL 540

Query: 541 PAKYEEAREEEKLRSQREDFSDMVAEN--EKKRKRKMQEKDGKSKKKDFKF 584
           PAKYEEAREEEKLR++  D SDMV E+  +  RKRKM +K+GK KKKDFKF
Sbjct: 541 PAKYEEAREEEKLRNKPVDLSDMVVEHVQQNSRKRKMHDKEGK-KKKDFKF 584

[Close]

BLAST of CmoCh12G009730 vs. TAIR 10
Match: AT4G21660.2 (proline-rich spliceosome-associated (PSP) family protein )

HSP 1 Score: 781.9 bits (2018), Expect = 3.5e-226
Identity = 441/605 (72.89%), Postives = 502/605 (82.98%), Query Frame = 0


Query: 1   MTAE-VISQPNGVVANGGDFDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAG 60
           MTA+  ++  + VV+NG   D+++   S ++KKSRE +RRRRRRKQKKN KAS+    A 
Sbjct: 1   MTADSTVALVHSVVSNG---DVSNGNTSASSKKSREIDRRRRRRKQKKNNKASQADVDA- 60

Query: 61  GEDSDASGDDTKENDDLLQVVEKVEIEYVPEKAELDDSLDEEFRRVFEKFNFSDVAGVEE 120
             D  A+ +  +  D   QV E++ IEYVPE+AE +D  ++EF+ +FEKFNF +    EE
Sbjct: 61  -SDVSAASESKENTDPQPQVCEQIVIEYVPEQAEFEDGFNDEFKEIFEKFNFREPLASEE 120

Query: 121 NENKDESAQNAASKK---SDSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLR 180
           +  KDES +    KK   SDSDSDD+E DNQ KEK G+SNKKKKLQRRMKIAELKQ+  R
Sbjct: 121 DGTKDESEEKEDVKKKVNSDSDSDDDEQDNQNKEK-GISNKKKKLQRRMKIAELKQVSAR 180

Query: 181 PDVVEIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQ--------------GKRGI 240
           PDVVE+WDAT+ADPKLLV+LKSYRNTVPVPRHW QKRK+LQ              GKRGI
Sbjct: 181 PDVVEVWDATSADPKLLVFLKSYRNTVPVPRHWSQKRKYLQGNYIKRDRNVCDNHGKRGI 240

Query: 241 EKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFK 300
           EKQPF LPDFIAATGIEKIRQAYIEKED KKLKQKQRERMQPKMGKMDIDYQVLHDAFFK
Sbjct: 241 EKQPFHLPDFIAATGIEKIRQAYIEKEDGKKLKQKQRERMQPKMGKMDIDYQVLHDAFFK 300

Query: 301 YQTKPKLTTLGDLYYEGKEFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPP 360
           YQTKPKL+ LGDLY+EGKEFEVKLRE KPG LS +LKEALGMPEGAPPPWLINMQRYGPP
Sbjct: 301 YQTKPKLSALGDLYFEGKEFEVKLRETKPGFLSNDLKEALGMPEGAPPPWLINMQRYGPP 360

Query: 361 PSYPDLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPV 420
           PSYP LKIPGLNAPIP GASFG+H GGWGKPPVDEYGRPLYGDVFGVQQQ+Q NYEEEP+
Sbjct: 361 PSYPHLKIPGLNAPIPIGASFGFHAGGWGKPPVDEYGRPLYGDVFGVQQQDQPNYEEEPI 420

Query: 421 DKTKHWGDLEEEEEEEVEEED--EEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQ 480
           DK+KHWGDLEEEEEEE EEE+  EEE++EEE++DG ESVD+LSSTPTG+ETPD I+LRK 
Sbjct: 421 DKSKHWGDLEEEEEEEEEEEEEQEEEMDEEELEDGTESVDTLSSTPTGIETPDAIELRKD 480

Query: 481 QRKEPDRPLYQVLEEKEEKVAPGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDV 540
           QRKEPDR LYQVLEEK E VAPGTLLGT+HTYVI  GTQ+KTGAKRVDLLRGQK+D+VDV
Sbjct: 481 QRKEPDRALYQVLEEKGESVAPGTLLGTSHTYVIKTGTQEKTGAKRVDLLRGQKTDRVDV 540

Query: 541 TLRPEELEAMENVLPAKYEEAREEEKLRSQREDFSDMVAEN--EKKRKRKMQEKDGKSKK 584
           +L+PEEL+AMENVLPAKYEEAREEEKLR++  D SDMV E+  +  RKRKM +K+GK KK
Sbjct: 541 SLQPEELDAMENVLPAKYEEAREEEKLRNKPVDLSDMVVEHVQQNSRKRKMHDKEGK-KK 598

[Close]

BLAST of CmoCh12G009730 vs. TAIR 10
Match: AT1G11520.1 (pliceosome associated protein-related )

HSP 1 Score: 155.2 bits (391), Expect = 1.6e-37
Identity = 86/114 (75.44%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 434 DGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEK-EEKVAPGTLLGTTHTY 493
           D ++   SLSSTPTG+ETPD I+LRK+QRKEPDR LYQVLEEK E  VAPGTLL TTHTY
Sbjct: 85  DAMDVSKSLSSTPTGIETPDAIELRKEQRKEPDRALYQVLEEKGESVVAPGTLLRTTHTY 144

Query: 494 VISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEAREEEK 547
           VI  GTQDKTG KRVDLLRGQK+D+VD +L+PEEL+AM NVL  +YEEAREEEK
Sbjct: 145 VIKTGTQDKTGTKRVDLLRGQKTDRVDFSLQPEELDAMGNVL--QYEEAREEEK 196

The following BLAST results are available for this feature:

BLAST of CmoCh12G009730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q13435	7.0e-123	49.83	Splicing factor 3B subunit 2 OS=Homo sapiens OX=9606 GN=SF3B2 PE=1 SV=2	[more]
Q9UUI3	8.6e-89	42.61	Pre-mRNA-splicing factor sap145 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]
Q02554	7.0e-30	30.02	Cold sensitive U2 snRNA suppressor 1 OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of CmoCh12G009730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHL4	0.0e+00	100.00	splicing factor 3B subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444220 ...	[more]
A0A6J1HNQ5	3.2e-304	97.60	splicing factor 3B subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465353 PE...	[more]
A0A1S3B4C3	5.6e-301	96.40	splicing factor 3B subunit 2 OS=Cucumis melo OX=3656 GN=LOC103485870 PE=4 SV=1	[more]
A0A0A0LMT1	4.0e-299	95.71	PSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G075450 PE=4 SV...	[more]
A0A6J1EV51	2.0e-298	96.40	splicing factor 3B subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111436228 ...	[more]

BLAST of CmoCh12G009730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21660.1	4.4e-229	74.62	proline-rich spliceosome-associated (PSP) family protein	[more]
AT4G21660.2	3.5e-226	72.89	proline-rich spliceosome-associated (PSP) family protein	[more]
AT1G11520.1	1.6e-37	75.44	pliceosome associated protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 411..433
None	No IPR available	COILS	Coil	Coil	coord: 144..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 534..583
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 397..411
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 396..468
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..436
None	No IPR available	PANTHER	PTHR12785	SPLICING FACTOR 3B	coord: 6..583
None	No IPR available	PANTHER	PTHR12785:SF13	SPLICING FACTOR 3B SUBUNIT 2-LIKE	coord: 6..583
IPR006568	PSP, proline-rich	SMART	SM00581	testneu	coord: 306..359 e-value: 1.2E-27 score: 107.8
IPR006568	PSP, proline-rich	PFAM	PF04046	PSP	coord: 310..355 e-value: 3.6E-22 score: 77.9
IPR007180	Domain of unknown function DUF382	PFAM	PF04037	DUF382	coord: 176..301 e-value: 2.7E-59 score: 198.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G009730.1	CmoCh12G009730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005689	U12-type spliceosomal complex
cellular_component	GO:0005686	U2 snRNP
cellular_component	GO:0005684	U2-type spliceosomal complex
cellular_component	GO:0005634	nucleus