CmoCh12G008400 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G008400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transmembrane protein 208 homolog
Location	Cmo_Chr12: 7677812 .. 7681132 (+)
RNA-Seq Expression	CmoCh12G008400
Synteny	CmoCh12G008400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGCATTAGGAATTTAGGATTCGACCCTCCCCGATGAACACCTGAAGTCCTTCTTCCTCTTCAGTTCATCCTGAATTTCAGATACCCACCCCTAACTGACCTAGATTTTACTCCCATTTCACAAGCAGTTTCGGAATCCGGCGACAAAGATGGCAAACCAAGGTGCAAAGAAGCGCAAGGAGGAGAACGCTCGTCATATGGCCAATCTCCGCCGCCTCATCATTGCATGCAATGTAAGGACTTCTTTTCCATCACTTCTCTCTATTTTTCTTCTCTCTTATGTCCGTAAATCATCCTTGTTGCTGATTTAGTATTCGCGTTGTAATTCTCTTGGAATTCTGGGCTGGAAGAAGTTGTAGGATGGTGTGTTTGTTACAAACAATCAACCATCTACTGGAAATTGTAATTTATCAGATAGGTTTAGATTCTGTTGGAAGCAAAGAAAATTTCATACTGTAAACATCCAATACTGGTAGATTTTATTTGCTTATTTATTATTCTTAGGTAAAAATCCGGAATTCTTGTTTTCCAAATTTGACTTGAAAATTGAAGTTGCGGCAGATACAGACGATTGTGCACGAGGAACATTGGAATGCAAGGTCGAGGAAGATCTCGAGTAATTTCTTCAGAGGAATATGAGATAACTAAAAAATTGAAGGATGGGAGAATTAGTTTTAGATTGTATATGTTTTGCAGTAAGTTTAGAGGTTATTTTGGTTTGTAAGTTCTTGTTTAGGATAGTTAAATCTTTTCTTAAGAGTTGTCAAAGGGATAAGCACCCTTCTGAGCATATCCTGAAACATCATCATATCATTTATTCATACAGCCTAAGAGGGCCGTGTGTCTTTGTGGAACTGGTATGACTTCATTGTTTTGTTCTTAGACTTTAACTTGAATTGTTTATGCAGGCTACCTATATTTTGGTTCGGATGCTGATTTTTCATTCAAGTTTCACTTGGAAACATTGGATTGGTTTGATTGTCACATCCGCAGCTTATTTTATTCCTTACAACCAACTTTCCAACATGGCAAACCCAACCTATGGTGATGAAGGTGAACTACTAGATGGTGGATTTGATATGAATACTGGTGGAATTTGTGGGTATGTCTTTAGTCTTCTTAATGTTTATCATTGCCTGTCAGTTTTATGCATGTTTTATCTTCTATATGAAGTATAATCGTTGAATACAGATCTGACATATTTAATTGTTCTAATGACAAAATTTTAAGTGAAACCAAGCTTTTAAACTTGCTAAGAATTGGTATGATATTGTTCACCTTAGATCAAATTTTTTGAGGAAGCTGGAGCTATTTTTCCTGGTTGTCATTCCAAAATTCAGTGCTAAGTGATTGAAATGGAAGGGTCTAGTGATGTGCGCGGCAGCATACTCTGGATATGATTTCCTCTCCTTCTGGATTTTATGACTGAAATCATTTGTAGCATTGTCAATTCATATTCAGTATACTTGTCAATTGGCTTAATATCTCTCGATAATAGCAATGTCCTTAATCATCATGGTGGTTTGGTCAGCTTCTTTACTGGTTATCTTTGAATTTTCTTTCTCAAGGAGATTTCAAATAGGATATAGACACGCACTTGCAGCTTAAGAATGTTTGGGGTTGTAAGTTTTTTGGGGAAATGGTCCTGCTCCATTGATTGCTTTGATCAATTGATGTGTTGGTTTGATCATCAAAGTGACAAATAAGTCCATGCTATGTTTTTGACCTGACAAAATATTAGGTGTTGTGGGGGTTTATCTATTTGGTTGTAAAGGTGGTGAACGTGGGAGCGAGATTGGGGTTAAATCATTTCATTCGGGTGGTTCTAGTTTAAGATGATTAATTGTCAGGATTTTAAAAATAGCTAAAGTTAAATTTTATCTCTGAATTTGAAAAAGTTGCATTTTCATGTTTCACTGCTTTCTCCTCTGAACTGGACAGAACCCTAATGGTGAAATACAGTGTAGTGCTTGCCAAGGCCACATTTCAGGCCATCAGACCTGCAACTGAATGTTGTTTCTTGTGTGCCTTGTAGTTTATATGGTAATTTAAATCTCATTGTAGCAACAAGGAGCTCTAGTGTTTTTATAATAATTCTAAAGTAATTGACTTTAAAGCTATACTAGTTGTGAACCCATATGTTCATATGGCTACAAGTTCTTTGAAGCCTCACGGCATTGACGTTAGGTGAAGGATTCACCTAGGACCGTTACCAGTTCCATGTAGCGATTGTTACATCGTCAAAACTTGTGTCGTAAACGTTTTCTTGGCATTTGAACAATTAATCGAAACATCTTGATGGGTTGTCTTGTTTTGTGCAGCTACTTGCATGACATGATCTACATTACAAGCTTTGTGCAAATAATGTCAATCCTCTCTGGGAAGTTTTGGTACACCTACCTTGTGGTAAGATCCAAATACGTCTGAAATTGAACTTAGACATATTTAGTGTAATATAGCCTAGGCCTAATCCCGATTTTTGGGCGTGAAACAATGTCAATGATGTATTGTTCTGAAATGACTTTAAGTGTACATCTATTTATAAACGCGTGTCTATCTCTAAACATTATTTTTCGTGTTACCTATATTACTAAATATTTGTGCAACTAATAGAAATTCAAAATAATACGCCCTATGACCAACAAGTTAAAGTAGGCATACTTCACTAGTTCTTAATATTCATTTCCTCATTGCTCTGCAGATTCCAGCATTTGGGGTATACAAATCATCTGGTTTAATTAAGGGATTATTGTCGCAAGGTTCAGAGGTAATCAAACCCGGACCAGACCTGCTTTCTTTATTTAGTTAGGCCCGGTCTTCTCTTTTCATTTAGGCGTATACTTGCGTGTCGATTAGGATGAACCTGAGGACGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCTTCAAGGGTGAAGTTTGTAAAGACCAAGAATAGATAATCTTCTCTTCAACATTAAACGGAATCAAGTGGGTGCAATCAACTTAAGTTATCGGATTCAAATTCGAGCAGATGGACCGCAGACACGGTCGAGATTTAGGTACCACATGAAATTGGTTTGAGTGAGAAGTTTGTGTATTGATCTGATTACTTTTATCAGGAATAAGGGGCAAAAGTATATCATTGTAACAACCTCCATTCTGTCAACTGAGCATTTAAAAGTGTCCTACAGGTACAGAACTTTTGCTGCTTTGGTTTCATTTAGAGATCTAGGAGAGGGATATCAAAGCAATAGTTTTAAATCCCTTTTAAATTTGTTCTAACACATTTTTATTGCACATTATAATTTTTAATAACGTTCTAGGAGACTCC

mRNA sequence

TTAGCATTAGGAATTTAGGATTCGACCCTCCCCGATGAACACCTGAAGTCCTTCTTCCTCTTCAGTTCATCCTGAATTTCAGATACCCACCCCTAACTGACCTAGATTTTACTCCCATTTCACAAGCAGTTTCGGAATCCGGCGACAAAGATGGCAAACCAAGGTGCAAAGAAGCGCAAGGAGGAGAACGCTCGTCATATGGCCAATCTCCGCCGCCTCATCATTGCATGCAATGCTACCTATATTTTGGTTCGGATGCTGATTTTTCATTCAAGTTTCACTTGGAAACATTGGATTGGTTTGATTGTCACATCCGCAGCTTATTTTATTCCTTACAACCAACTTTCCAACATGGCAAACCCAACCTATGGTGATGAAGGTGAACTACTAGATGGTGGATTTGATATGAATACTGGTGGAATTTGTGGCTACTTGCATGACATGATCTACATTACAAGCTTTGTGCAAATAATGTCAATCCTCTCTGGGAAGTTTTGGTACACCTACCTTGTGATTCCAGCATTTGGGGTATACAAATCATCTGGTTTAATTAAGGGATTATTGTCGCAAGGTTCAGAGGATGAACCTGAGGACGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCTTCAAGGGTGAAGTTTGTAAAGACCAAGAATAGATAATCTTCTCTTCAACATTAAACGGAATCAAGTGGGTGCAATCAACTTAAGTTATCGGATTCAAATTCGAGCAGATGGACCGCAGACACGGTCGAGATTTAGGTACCACATGAAATTGGTTTGAGTGAGAAGTTTGTGTATTGATCTGATTACTTTTATCAGGAATAAGGGGCAAAAGTATATCATTGTAACAACCTCCATTCTGTCAACTGAGCATTTAAAAGTGTCCTACAGGTACAGAACTTTTGCTGCTTTGGTTTCATTTAGAGATCTAGGAGAGGGATATCAAAGCAATAGTTTTAAATCCCTTTTAAATTTGTTCTAACACATTTTTATTGCACATTATAATTTTTAATAACGTTCTAGGAGACTCC

Coding sequence (CDS)

ATGGCAAACCAAGGTGCAAAGAAGCGCAAGGAGGAGAACGCTCGTCATATGGCCAATCTCCGCCGCCTCATCATTGCATGCAATGCTACCTATATTTTGGTTCGGATGCTGATTTTTCATTCAAGTTTCACTTGGAAACATTGGATTGGTTTGATTGTCACATCCGCAGCTTATTTTATTCCTTACAACCAACTTTCCAACATGGCAAACCCAACCTATGGTGATGAAGGTGAACTACTAGATGGTGGATTTGATATGAATACTGGTGGAATTTGTGGCTACTTGCATGACATGATCTACATTACAAGCTTTGTGCAAATAATGTCAATCCTCTCTGGGAAGTTTTGGTACACCTACCTTGTGATTCCAGCATTTGGGGTATACAAATCATCTGGTTTAATTAAGGGATTATTGTCGCAAGGTTCAGAGGATGAACCTGAGGACGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCTTCAAGGGTGAAGTTTGTAAAGACCAAGAATAGATAA

Protein sequence

MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFIPYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR

Homology

[Close]

BLAST of CmoCh12G008400 vs. ExPASy Swiss-Prot
Match: Q54UB0 (Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem208 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.0e-21
Identity = 64/173 (36.99%), Postives = 97/173 (56.07%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           MAN GAKKRK +N + +  +R ++ A    YIL R++    +F    W   +  +A    
Sbjct: 1   MANSGAKKRKTQNEKELFKVRLIMAAGTIPYILYRVVYHSETFGGWLWFAYLSLNALNMF 60

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120
            Y  +++M   TY + GEL+DGG D+N GG+  Y  D+IY+   +Q + ++S K  Y  L
Sbjct: 61  AYYIITSMCKLTYDNNGELIDGGSDLNQGGMTEYYFDIIYVCCIIQGLGLISDKCLYLIL 120

Query: 121 VIPAFGVYKSSGLIKG--LLSQGSEDEPEDEKTRKKREKMEKK--ASRVKFVK 170
           VIPAF ++K      G  L S+  + +   E+  K+REKMEKK    +VK+VK
Sbjct: 121 VIPAFAIFKIWKTFIGPYLASRNQQQQQPQEEKSKRREKMEKKQEKQKVKYVK 173

[Close]

BLAST of CmoCh12G008400 vs. ExPASy Swiss-Prot
Match: Q6NYP0 (Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.3e-18
Identity = 58/167 (34.73%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  NA YI V +L+F++S ++  W  L+   A Y  
Sbjct: 7   VGTKGKKQIHEENQDTLKFYSRIILGANAIYIAVNLLLFYNSSSFWTWFSLMFAVAVYVG 66

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMN-TGGICGYLHDMIYITSFVQIMSILSGKFWYTY 120
            Y  +S MA P + ++G LLDGG D+N   G+  +L D+I +T+ VQ++S LS  FWY +
Sbjct: 67  SYRSMSAMAKPAFAEDGSLLDGGIDLNMEQGMAEHLKDVILLTAIVQVLSTLSSYFWYLW 126

Query: 121 LVIPAFGVYKS-SGLIKGLLSQGSEDEPED-EKTRKKREKMEKKASR 165
           L+ PA  ++      +    S  S+  PE+ EK  KK+ + E++  R
Sbjct: 127 LLAPARALHLLWVNFLGPWFSADSQAAPEENEKNDKKQRRQERRQMR 173

[Close]

BLAST of CmoCh12G008400 vs. ExPASy Swiss-Prot
Match: Q3SZZ5 (Transmembrane protein 208 OS=Bos taurus OX=9913 GN=TMEM208 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-14
Identity = 48/162 (29.63%), Postives = 87/162 (53.70%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  NA Y LV +++F+SS ++  W+ L+ + A Y  
Sbjct: 7   VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVVFYSSASFWAWMALLFSLAVYGA 66

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMN-TGGICGYLHDMIYITSFVQIMSILSGKFWYTY 120
            Y+ +S+MA   + ++G L+DGG D+N   G+  +L D+I +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARAAFSEDGALVDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFW 126

Query: 121 LVIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKK 162
           L+ P   +Y     + G         P  E   K++ + E++
Sbjct: 127 LLAPGRALYLLWVNVLGPWFTADSGAPAPEHNEKRQRRQERR 168

[Close]

BLAST of CmoCh12G008400 vs. ExPASy Swiss-Prot
Match: Q9CR96 (Transmembrane protein 208 OS=Mus musculus OX=10090 GN=Tmem208 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-13
Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  NA Y LV ++ F+SS ++  W+ L  + A Y  
Sbjct: 7   VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWMALGFSLAVYGA 66

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMN-TGGICGYLHDMIYITSFVQIMSILSGKFWYTY 120
            Y+ +S+MA  ++ ++G L+DGG D+N   G+  +L D+I +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARASFSEDGSLMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFW 126

Query: 121 LVIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKK 162
           L+ P   +Y     + G         P  E   K++ + E++
Sbjct: 127 LLAPGRALYLLWVNVLGPWFTADSGAPAPELNEKRQRRQERR 168

[Close]

BLAST of CmoCh12G008400 vs. ExPASy Swiss-Prot
Match: Q9BTX3 (Transmembrane protein 208 OS=Homo sapiens OX=9606 GN=TMEM208 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.0e-13
Identity = 48/162 (29.63%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  NA Y LV ++ F+SS ++  W+ L  + A Y  
Sbjct: 7   VGTRGKKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGA 66

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMN-TGGICGYLHDMIYITSFVQIMSILSGKFWYTY 120
            Y+ +S+MA   + ++G L+DGG D+N   G+  +L D+I +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFW 126

Query: 121 LVIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKK 162
           L+ P   +Y     + G         P  E   K++ + E++
Sbjct: 127 LLAPGRALYLLWVNVLGPWFTADSGTPAPEHNEKRQRRQERR 168

[Close]

BLAST of CmoCh12G008400 vs. ExPASy TrEMBL
Match: A0A6J1FB96 (transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111443871 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.0e-90
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120
           PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

[Close]

BLAST of CmoCh12G008400 vs. ExPASy TrEMBL
Match: A0A6J1I0K5 (transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468625 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.0e-88
Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120
           PYNQLSNM  PTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLSNMGTPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

[Close]

BLAST of CmoCh12G008400 vs. ExPASy TrEMBL
Match: A0A6J1KBQ8 (transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.8e-84
Identity = 160/173 (92.49%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACN  YILVRMLIFHSSFTWKHW+GLIVTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120
           PYNQL+ MA+PTYGD+GELLDGGFDM+TGGICGY+HD+IYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSGLIK LLS GSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Sbjct: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 173

[Close]

BLAST of CmoCh12G008400 vs. ExPASy TrEMBL
Match: A0A6J1G433 (transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450556 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.8e-84
Identity = 160/173 (92.49%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACN  YILVRMLIFHSSFTWKHW+GLIVTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120
           PYNQL+ MA+PTYGD+GELLDGGFDM+TGGICGY+HD+IYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSGLIK LLS GSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Sbjct: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 173

[Close]

BLAST of CmoCh12G008400 vs. ExPASy TrEMBL
Match: A0A1S3BUY1 (transmembrane protein 208 homolog OS=Cucumis melo OX=3656 GN=LOC103493461 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 161/173 (93.06%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACN  YILVRMLIFHSSFTWKHWIGLIVTS AYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIVTSVAYFI 60

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120
           PYNQL  MA PTYGD+GELLDGGFDM+T GICGY+HD+IYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMAKPTYGDDGELLDGGFDMSTDGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYKSSGLI+GLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR
Sbjct: 121 VIPAFGVYKSSGLIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

[Close]

BLAST of CmoCh12G008400 vs. TAIR 10
Match: AT2G23940.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 261.9 bits (668), Expect = 3.6e-70
Identity = 130/173 (75.14%), Postives = 150/173 (86.71%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           MANQGAKKRKEENA+HMA LRR+IIA NA Y +VRMLIF+SSFTWKHWIGL++TS AY  
Sbjct: 1   MANQGAKKRKEENAKHMAKLRRIIIASNAVYFVVRMLIFYSSFTWKHWIGLVITSLAYAF 60

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120
           PY QL  MA P+  D+GEL+DGGFDM TGGICGYLHD+IYIT FVQ+ SI++GKFWYTYL
Sbjct: 61  PYKQLDQMAKPSVTDDGELIDGGFDMTTGGICGYLHDVIYITCFVQLASIITGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFGVYK+SGLI+G +SQGSE   EDEK+RKKREKME+KASR + VKT+ R
Sbjct: 121 VIPAFGVYKASGLIRGFMSQGSEGGVEDEKSRKKREKMERKASRGQVVKTRTR 173

[Close]

BLAST of CmoCh12G008400 vs. TAIR 10
Match: AT4G30500.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-64
Identity = 123/173 (71.10%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNATYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60
           MANQGAKKRK+ENARHMA LR ++I CN  Y+LVR++I HSS TWK+WIGL++TS  Y I
Sbjct: 1   MANQGAKKRKDENARHMAKLRLIMILCNILYVLVRVIISHSSHTWKNWIGLVLTSLGYGI 60

Query: 61  PYNQLSNMANPTYGDEGELLDGGFDMNTGGICGYLHDMIYITSFVQIMSILSGKFWYTYL 120
           PY  L  MA P+  D GELLDGGFDM+T G+CGYLHD++YIT FVQ+ SI+SGKFWY YL
Sbjct: 61  PYKLLHQMAKPSVSDAGELLDGGFDMSTPGMCGYLHDVLYITCFVQVGSIISGKFWYAYL 120

Query: 121 VIPAFGVYKSSGLIKGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 174
           VIPAFG YK+SGLIKGLLS GSE   EDEKTRKKREKME+KASR + VKT++R
Sbjct: 121 VIPAFGAYKASGLIKGLLSHGSEGGVEDEKTRKKREKMERKASRGQVVKTRSR 173

The following BLAST results are available for this feature:

BLAST of CmoCh12G008400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54UB0	3.0e-21	36.99	Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem20...	[more]
Q6NYP0	5.3e-18	34.73	Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1	[more]
Q3SZZ5	3.5e-14	29.63	Transmembrane protein 208 OS=Bos taurus OX=9913 GN=TMEM208 PE=2 SV=1	[more]
Q9CR96	2.3e-13	29.63	Transmembrane protein 208 OS=Mus musculus OX=10090 GN=Tmem208 PE=2 SV=1	[more]
Q9BTX3	3.0e-13	29.63	Transmembrane protein 208 OS=Homo sapiens OX=9606 GN=TMEM208 PE=1 SV=1	[more]

BLAST of CmoCh12G008400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FB96	7.0e-90	100.00	transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111443871 ...	[more]
A0A6J1I0K5	1.0e-88	98.84	transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468625 PE...	[more]
A0A6J1KBQ8	9.8e-84	92.49	transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE...	[more]
A0A6J1G433	9.8e-84	92.49	transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450556 ...	[more]
A0A1S3BUY1	1.3e-83	93.06	transmembrane protein 208 homolog OS=Cucumis melo OX=3656 GN=LOC103493461 PE=3 S...	[more]

BLAST of CmoCh12G008400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23940.1	3.6e-70	75.14	Protein of unknown function (DUF788)	[more]
AT4G30500.1	1.0e-64	71.10	Protein of unknown function (DUF788)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008506	SRP-independent targeting protein 2/TMEM208	PFAM	PF05620	TMEM208_SND2	coord: 1..162 e-value: 2.3E-55 score: 187.0
IPR008506	SRP-independent targeting protein 2/TMEM208	PANTHER	PTHR13505	TRANSMEMBRANE PROTEIN 208	coord: 1..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..165
None	No IPR available	PANTHER	PTHR13505:SF8	BNAA01G06570D PROTEIN	coord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G008400.1	CmoCh12G008400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006624	vacuolar protein processing
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005773	vacuole