Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTTTGGGATTTTCTCGGGAACCAAACACAAAACAAAAGAAACAATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTATGTGTGTCCTTTACATAAAGATGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCGTCGCTCGTTCTGCTTCTATTGCCGATCCGACCTACACCACGATCACCGCGTTATTCAGGTTGGTTTTCCTTATCATAATCGAACATGATCCTCTATTTCACAATGTGGGTATCAATTTTTAGCCTCTTGAATTTGTAATTCGTGTAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCGAGAGTTTTGTTTTTGAATGAGAGACCTCAGCCGAAGAGTTCGGCTAGTAAAGGAGGCACCCACATGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGCTCTCTTGGTTGCAAGGTAAATCTCTTTAGCTTCAGATTGAACTATACTCGAGTTGATATTTTATGTATTATTTTAAATTTTACTGATAAAATGACGATATAATGATGTCAAAATATTAAATCTTTTCTTTATGCTTTAGTTTATGAAATCGACATGTCTTAGGATGAAATTGATAATTTACCTACTTTATAAAATGACCTAATATAGCATTATAACTTACCTAACCTCGAGTGGGTCCGTGCTATTATGGAAAATAATAATGTAACTATAGGTATTAACCGACCATTTCTTCTTCTTTATAAGCTTTCGGCGAAAATACTCTTTTCCATAAGTTGCAAACCTACTCGAGCATAGTTCAGCTTTGAATCTCCGTTTTGGGTTTTATACTATCAAATCAATTGCCGTTTTCGTGAGTGGTTTAGGTGAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAATTATACCAAAATCACACGCATCCTTCACATTCAAATTCGAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA
mRNA sequence
TTGTTTGGGATTTTCTCGGGAACCAAACACAAAACAAAAGAAACAATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTATGTGTGTCCTTTACATAAAGATGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCGTCGCTCGTTCTGCTTCTATTGCCGATCCGACCTACACCACGATCACCGCGTTATTCAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCGAGAGTTTTGTTTTTGAATGAGAGACCTCAGCCGAAGAGTTCGGCTAGTAAAGGAGGCACCCACATGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGCTCTCTTGGTTGCAAGGTGAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAATTATACCAAAATCACACGCATCCTTCACATTCAAATTCGAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA
Coding sequence (CDS)
ATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTATGTGTGTCCTTTACATAAAGATGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCGTCGCTCGTTCTGCTTCTATTGCCGATCCGACCTACACCACGATCACCGCGTTATTCAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCGAGAGTTTTGTTTTTGAATGAGAGACCTCAGCCGAAGAGTTCGGCTAGTAAAGGAGGCACCCACATGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGCTCTCTTGGTTGCAAGGTGAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAATTATACCAAAATCACACGCATCCTTCACATTCAAATTCGAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA
Protein sequence
MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQEGELYQNHTHPSHSNSRRRKGIPQRAPF
Homology
BLAST of CmoCh12G008180 vs. ExPASy Swiss-Prot
Match:
Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)
HSP 1 Score: 122.9 bits (307), Expect = 4.4e-27
Identity = 59/130 (45.38%), Postives = 85/130 (65.38%), Query Frame = 0
Query: 4 PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
P WL++L + FF CP H+ A ++E N+ CLDC S C +C H HR++Q+RR
Sbjct: 6 PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDC-CTSLCPHCVPS-HRFHRLLQVRRYV 65
Query: 64 YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDP 123
YHDVVR+ +++K++D S +Q Y INSA+V+F+ +RPQ + KG + C C R L +P
Sbjct: 66 YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQ--FKGAGNYCTSCDRSLQEP 125
Query: 124 FRFCSLGCKV 134
+ CSLGCKV
Sbjct: 126 YIHCSLGCKV 131
BLAST of CmoCh12G008180 vs. ExPASy TrEMBL
Match:
A0A6J1FD43 (uncharacterized protein LOC111444296 OS=Cucurbita moschata OX=3662 GN=LOC111444296 PE=4 SV=1)
HSP 1 Score: 421.0 bits (1081), Expect = 2.9e-114
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
Query: 1 MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIR 60
MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIR
Sbjct: 1 MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIR 60
Query: 61 RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCL 120
RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCL
Sbjct: 61 RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCL 120
Query: 121 LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQ 180
LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQ
Sbjct: 121 LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQ 180
Query: 181 EGELYQNHTHPSHSNSRRRKGIPQRAPF 209
EGELYQNHTHPSHSNSRRRKGIPQRAPF
Sbjct: 181 EGELYQNHTHPSHSNSRRRKGIPQRAPF 208
BLAST of CmoCh12G008180 vs. ExPASy TrEMBL
Match:
A0A6J1HWK1 (uncharacterized protein LOC111468520 OS=Cucurbita maxima OX=3661 GN=LOC111468520 PE=4 SV=1)
HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 0
Query: 1 MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIR 60
MVIPTWLESLLSTPFFY CPLHKDAPRSECNMFCLDCH +FCFYCRSDLHHDHRVIQIR
Sbjct: 1 MVIPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIR 60
Query: 61 RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCL 120
RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGG+H+CEICSRCL
Sbjct: 61 RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCL 120
Query: 121 LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQ 180
LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLG EEEEEEEEELRVRRNQ
Sbjct: 121 LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLG--EEEEEEEEELRVRRNQ 180
Query: 181 EGELYQNHTHPSHSNSRRRKGIPQRAPF 209
EGE+YQNHTHPSHSNSRRRKGIPQRAPF
Sbjct: 181 EGEIYQNHTHPSHSNSRRRKGIPQRAPF 206
BLAST of CmoCh12G008180 vs. ExPASy TrEMBL
Match:
A0A0A0LY15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136780 PE=4 SV=1)
HSP 1 Score: 306.6 bits (784), Expect = 7.9e-80
Identity = 162/214 (75.70%), Postives = 174/214 (81.31%), Query Frame = 0
Query: 3 IPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDC-HRRSFCFYCRSDLHHDHRVIQIRR 62
IP WLE LLST FF CP HK APRSECNMFCLDC H SFCFYCRS+ HH H VIQIRR
Sbjct: 4 IPRWLECLLSTTFFNACPSHKQAPRSECNMFCLDCSHSSSFCFYCRSNKHHHHHVIQIRR 63
Query: 63 SSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLL 122
SSYHDVVRVAEIE VLDISE+QTYVINSARVLFLNERPQPKSS SKGG+H+CEIC+R LL
Sbjct: 64 SSYHDVVRVAEIENVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHVCEICTRSLL 123
Query: 123 DPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVR 182
DPFRFCSLGCKV N DS FY + +EEV +GRRLG +EE+EEEEE LRV
Sbjct: 124 DPFRFCSLGCKVIGIKTNMDSGFYLRGKNNEEV------LGRRLGSKEEDEEEEEGLRVG 183
Query: 183 RN---QEGELYQNHTHPSHSNSRRRKGIPQRAPF 209
RN +EGE+YQNHTH SHSNSRRRKGIPQRAPF
Sbjct: 184 RNEEEEEGEIYQNHTHSSHSNSRRRKGIPQRAPF 211
BLAST of CmoCh12G008180 vs. ExPASy TrEMBL
Match:
A0A6J1DG68 (uncharacterized protein LOC111020539 OS=Momordica charantia OX=3673 GN=LOC111020539 PE=4 SV=1)
HSP 1 Score: 306.6 bits (784), Expect = 7.9e-80
Identity = 160/214 (74.77%), Postives = 176/214 (82.24%), Query Frame = 0
Query: 1 MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIR 60
M++P WLESLLST FF++CP HKDAPRSECNMFCLDC SFCFYCRS+ HHDH VIQIR
Sbjct: 1 MIVPPWLESLLSTGFFFLCPSHKDAPRSECNMFCLDCPHGSFCFYCRSNHHHDHHVIQIR 60
Query: 61 RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGG--THMCEICSR 120
RSSYHDVVRVAEIEKVLDISE+QTYVINSARVLFLNERPQPK+SASKG +H+CEIC+R
Sbjct: 61 RSSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKNSASKGSSQSHVCEICAR 120
Query: 121 CLLDPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEEL 180
LLDPFRFCSLGCKV N DSNFYP + +EEV +GRRLG +EEEEEL
Sbjct: 121 SLLDPFRFCSLGCKVVGIKNNGDSNFYPRGENNEEV------LGRRLG----SKEEEEEL 180
Query: 181 RVRRNQEGELYQNHTHPSHSNSRRRKGIPQRAPF 209
RR QE E+Y +HTHPSHSNSRRRKGIP RAPF
Sbjct: 181 LERRKQEAEIY-HHTHPSHSNSRRRKGIPHRAPF 203
BLAST of CmoCh12G008180 vs. ExPASy TrEMBL
Match:
A0A1S3CGK9 (uncharacterized protein LOC103500687 OS=Cucumis melo OX=3656 GN=LOC103500687 PE=4 SV=1)
HSP 1 Score: 301.2 bits (770), Expect = 3.3e-78
Identity = 162/215 (75.35%), Postives = 174/215 (80.93%), Query Frame = 0
Query: 3 IPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDC-HRRSFCFYCRSDLHHDHRVIQIRR 62
IP WLE LLST FF CP HK APRSECNMFCLDC H SFCFYCRS+ HH H VIQIRR
Sbjct: 14 IPRWLECLLSTTFFNACPSHKQAPRSECNMFCLDCSHSSSFCFYCRSNKHHHHHVIQIRR 73
Query: 63 SSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLL 122
SSYHDVVRVAEIE VLDISE+QTYVINSARVLFLNERPQPKSS SKGG+H+CEICSR LL
Sbjct: 74 SSYHDVVRVAEIENVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHVCEICSRSLL 133
Query: 123 DPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLG---EEEEEEEEEEEL 182
DPFRFCSLGCKV N +S FY + +EEV +GRRLG E+EEEEE+EE L
Sbjct: 134 DPFRFCSLGCKVIGLKTNNNSRFYSRGKNNEEV------VGRRLGSKEEDEEEEEDEEGL 193
Query: 183 RVRRN-QEGELYQNHTHPSHSNSRRRKGIPQRAPF 209
RV RN +EGE+YQNHT SHSNSRRRKGIPQRAPF
Sbjct: 194 RVGRNEEEGEIYQNHTLSSHSNSRRRKGIPQRAPF 222
BLAST of CmoCh12G008180 vs. TAIR 10
Match:
AT2G27930.1 (PLATZ transcription factor family protein )
HSP 1 Score: 215.7 bits (548), Expect = 3.5e-56
Identity = 119/213 (55.87%), Postives = 138/213 (64.79%), Query Frame = 0
Query: 4 PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
P WLE LL T FF +CP H++ PR+ECNMFCL C +FCFYCRS H DH V+QIRRSS
Sbjct: 4 PKWLEGLLRTNFFSICPRHRETPRNECNMFCLSCQNAAFCFYCRSSFHIDHPVLQIRRSS 63
Query: 64 YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPK-------SSASKGGTHMCEIC 123
YHDVVRV+EIE LDI +QTYVINSARVLFLNERPQPK SS K ++ CE C
Sbjct: 64 YHDVVRVSEIENALDIRGVQTYVINSARVLFLNERPQPKNSSHGAASSTPKTMSYFCETC 123
Query: 124 SRCLLDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRV 183
R LLDPFRFCSLGCKV+ G R +EEEEE R+
Sbjct: 124 CRTLLDPFRFCSLGCKVE-----------------------GMRKNKEEEEE------RL 183
Query: 184 RRNQEGELYQNHTHPSH-SNSRRRKGIPQRAPF 209
R+ ++ E ++ P+H SNSRRRKGIP RAPF
Sbjct: 184 RKERQQETHKGTHPPTHTSNSRRRKGIPHRAPF 187
BLAST of CmoCh12G008180 vs. TAIR 10
Match:
AT1G76590.1 (PLATZ transcription factor family protein )
HSP 1 Score: 164.9 bits (416), Expect = 7.1e-41
Identity = 104/241 (43.15%), Postives = 133/241 (55.19%), Query Frame = 0
Query: 4 PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
P WL +L +F C +H + +SECNMFCLDC +FC YC + H +HRV+QIRRSS
Sbjct: 18 PPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYCLLN-HRNHRVLQIRRSS 77
Query: 64 YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDP 123
YH+VVRV EI+K +DIS +QTY+INSAR++FLNERPQP+ KG T+ CEIC R LLD
Sbjct: 78 YHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPR--IGKGVTNTCEICCRSLLDS 137
Query: 124 FRFCSLGCK---VKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRR-- 183
FRFCSLGCK +K + S + KH GR E E +E ++R+
Sbjct: 138 FRFCSLGCKLGGMKRDPSLTFSLRGKH----------GREYEGEWESDEATTPTKIRKTC 197
Query: 184 -----------------------------NQEGELYQNHTHP--SHSNSRRRKGIPQRAP 209
++ G T P +H NS RRKG+P RAP
Sbjct: 198 AFNRLMSGLSISTVKCDYLSGDQPSSSSGDESGFKLSPGTPPIYNHRNSSRRKGVPHRAP 245
BLAST of CmoCh12G008180 vs. TAIR 10
Match:
AT1G32700.1 (PLATZ transcription factor family protein )
HSP 1 Score: 162.5 bits (410), Expect = 3.5e-40
Identity = 96/213 (45.07%), Postives = 125/213 (58.69%), Query Frame = 0
Query: 4 PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
P WL+ LL FF C LH D+ +SECNM+CLDC C C S H DH IQIRRSS
Sbjct: 12 PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLS-FHKDHHAIQIRRSS 71
Query: 64 YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDP 123
YHDV+RV+EI+K LDI+ +QTYVINSA+V+FLNERPQP+ KG + CE+C R L+D
Sbjct: 72 YHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPR--PGKGVINTCEVCYRSLVDS 131
Query: 124 FRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQEGE 183
FRFCSLGCK+ ++R+ L + ++ R+++N +
Sbjct: 132 FRFCSLGCKISGIS-------------KKKRKEWTNNLSDSDDSYSSTSIGRLKKND--D 191
Query: 184 LYQNHTHPS--------HSNSRRRKGIPQRAPF 209
+ N PS ++RRKGIP RAPF
Sbjct: 192 IMNNSFTPSTPPLSAVNRRIAKRRKGIPHRAPF 206
BLAST of CmoCh12G008180 vs. TAIR 10
Match:
AT1G21000.1 (PLATZ transcription factor family protein )
HSP 1 Score: 159.1 bits (401), Expect = 3.9e-39
Identity = 102/242 (42.15%), Postives = 136/242 (56.20%), Query Frame = 0
Query: 4 PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
P WL +L +F C +H D+ ++ECN+FCLDC +FC YC H DHRV+QIRRSS
Sbjct: 16 PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVK-HKDHRVVQIRRSS 75
Query: 64 YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDP 123
YH+VVRV EI+K +DI+ +QTY+INSA+++FLNERPQP+ KG T+ CEIC R LLD
Sbjct: 76 YHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPR--IGKGVTNTCEICCRSLLDS 135
Query: 124 FRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRR- 183
FRFCSLGCK+ + + S + + KH RE +G G E +E ++R
Sbjct: 136 FRFCSLGCKLGGMRRGDLSLTFSLKGKH-----GREYLG---GSESDEATTPTKMRKTNA 195
Query: 184 ------------------------------NQEGELYQNHTHP--SHSNSRRRKGIPQRA 209
++ G + T P +H NS RRKG+P RA
Sbjct: 196 FNRLMSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPPIYNHRNSSRRKGVPHRA 246
BLAST of CmoCh12G008180 vs. TAIR 10
Match:
AT1G21000.2 (PLATZ transcription factor family protein )
HSP 1 Score: 159.1 bits (401), Expect = 3.9e-39
Identity = 102/242 (42.15%), Postives = 136/242 (56.20%), Query Frame = 0
Query: 4 PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
P WL +L +F C +H D+ ++ECN+FCLDC +FC YC H DHRV+QIRRSS
Sbjct: 13 PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVK-HKDHRVVQIRRSS 72
Query: 64 YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDP 123
YH+VVRV EI+K +DI+ +QTY+INSA+++FLNERPQP+ KG T+ CEIC R LLD
Sbjct: 73 YHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPR--IGKGVTNTCEICCRSLLDS 132
Query: 124 FRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRR- 183
FRFCSLGCK+ + + S + + KH RE +G G E +E ++R
Sbjct: 133 FRFCSLGCKLGGMRRGDLSLTFSLKGKH-----GREYLG---GSESDEATTPTKMRKTNA 192
Query: 184 ------------------------------NQEGELYQNHTHP--SHSNSRRRKGIPQRA 209
++ G + T P +H NS RRKG+P RA
Sbjct: 193 FNRLMSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPPIYNHRNSSRRKGVPHRA 243
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q1G3Q4 | 4.4e-27 | 45.38 | Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FD43 | 2.9e-114 | 100.00 | uncharacterized protein LOC111444296 OS=Cucurbita moschata OX=3662 GN=LOC1114442... | [more] |
A0A6J1HWK1 | 1.1e-108 | 95.67 | uncharacterized protein LOC111468520 OS=Cucurbita maxima OX=3661 GN=LOC111468520... | [more] |
A0A0A0LY15 | 7.9e-80 | 75.70 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136780 PE=4 SV=1 | [more] |
A0A6J1DG68 | 7.9e-80 | 74.77 | uncharacterized protein LOC111020539 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A1S3CGK9 | 3.3e-78 | 75.35 | uncharacterized protein LOC103500687 OS=Cucumis melo OX=3656 GN=LOC103500687 PE=... | [more] |