CmoCh12G008180 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G008180
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPLATZ transcription factor family protein
LocationCmo_Chr12: 7370272 .. 7371439 (-)
RNA-Seq ExpressionCmoCh12G008180
SyntenyCmoCh12G008180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTTTGGGATTTTCTCGGGAACCAAACACAAAACAAAAGAAACAATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTATGTGTGTCCTTTACATAAAGATGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCGTCGCTCGTTCTGCTTCTATTGCCGATCCGACCTACACCACGATCACCGCGTTATTCAGGTTGGTTTTCCTTATCATAATCGAACATGATCCTCTATTTCACAATGTGGGTATCAATTTTTAGCCTCTTGAATTTGTAATTCGTGTAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCGAGAGTTTTGTTTTTGAATGAGAGACCTCAGCCGAAGAGTTCGGCTAGTAAAGGAGGCACCCACATGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGCTCTCTTGGTTGCAAGGTAAATCTCTTTAGCTTCAGATTGAACTATACTCGAGTTGATATTTTATGTATTATTTTAAATTTTACTGATAAAATGACGATATAATGATGTCAAAATATTAAATCTTTTCTTTATGCTTTAGTTTATGAAATCGACATGTCTTAGGATGAAATTGATAATTTACCTACTTTATAAAATGACCTAATATAGCATTATAACTTACCTAACCTCGAGTGGGTCCGTGCTATTATGGAAAATAATAATGTAACTATAGGTATTAACCGACCATTTCTTCTTCTTTATAAGCTTTCGGCGAAAATACTCTTTTCCATAAGTTGCAAACCTACTCGAGCATAGTTCAGCTTTGAATCTCCGTTTTGGGTTTTATACTATCAAATCAATTGCCGTTTTCGTGAGTGGTTTAGGTGAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAATTATACCAAAATCACACGCATCCTTCACATTCAAATTCGAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA

mRNA sequence

TTGTTTGGGATTTTCTCGGGAACCAAACACAAAACAAAAGAAACAATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTATGTGTGTCCTTTACATAAAGATGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCGTCGCTCGTTCTGCTTCTATTGCCGATCCGACCTACACCACGATCACCGCGTTATTCAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCGAGAGTTTTGTTTTTGAATGAGAGACCTCAGCCGAAGAGTTCGGCTAGTAAAGGAGGCACCCACATGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGCTCTCTTGGTTGCAAGGTGAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAATTATACCAAAATCACACGCATCCTTCACATTCAAATTCGAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA

Coding sequence (CDS)

ATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTATGTGTGTCCTTTACATAAAGATGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCGTCGCTCGTTCTGCTTCTATTGCCGATCCGACCTACACCACGATCACCGCGTTATTCAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCGAGAGTTTTGTTTTTGAATGAGAGACCTCAGCCGAAGAGTTCGGCTAGTAAAGGAGGCACCCACATGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGCTCTCTTGGTTGCAAGGTGAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAATTATACCAAAATCACACGCATCCTTCACATTCAAATTCGAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA

Protein sequence

MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQEGELYQNHTHPSHSNSRRRKGIPQRAPF
Homology
BLAST of CmoCh12G008180 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.4e-27
Identity = 59/130 (45.38%), Postives = 85/130 (65.38%), Query Frame = 0

Query: 4   PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
           P WL++L +  FF  CP H+ A ++E N+ CLDC   S C +C    H  HR++Q+RR  
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDC-CTSLCPHCVPS-HRFHRLLQVRRYV 65

Query: 64  YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDP 123
           YHDVVR+ +++K++D S +Q Y INSA+V+F+ +RPQ +    KG  + C  C R L +P
Sbjct: 66  YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQ--FKGAGNYCTSCDRSLQEP 125

Query: 124 FRFCSLGCKV 134
           +  CSLGCKV
Sbjct: 126 YIHCSLGCKV 131

BLAST of CmoCh12G008180 vs. ExPASy TrEMBL
Match: A0A6J1FD43 (uncharacterized protein LOC111444296 OS=Cucurbita moschata OX=3662 GN=LOC111444296 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.9e-114
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0

Query: 1   MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIR 60
           MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIR
Sbjct: 1   MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIR 60

Query: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCL 120
           RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCL
Sbjct: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCL 120

Query: 121 LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQ 180
           LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQ
Sbjct: 121 LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQ 180

Query: 181 EGELYQNHTHPSHSNSRRRKGIPQRAPF 209
           EGELYQNHTHPSHSNSRRRKGIPQRAPF
Sbjct: 181 EGELYQNHTHPSHSNSRRRKGIPQRAPF 208

BLAST of CmoCh12G008180 vs. ExPASy TrEMBL
Match: A0A6J1HWK1 (uncharacterized protein LOC111468520 OS=Cucurbita maxima OX=3661 GN=LOC111468520 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 0

Query: 1   MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIR 60
           MVIPTWLESLLSTPFFY CPLHKDAPRSECNMFCLDCH  +FCFYCRSDLHHDHRVIQIR
Sbjct: 1   MVIPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIR 60

Query: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCL 120
           RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGG+H+CEICSRCL
Sbjct: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCL 120

Query: 121 LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQ 180
           LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLG  EEEEEEEEELRVRRNQ
Sbjct: 121 LDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLG--EEEEEEEEELRVRRNQ 180

Query: 181 EGELYQNHTHPSHSNSRRRKGIPQRAPF 209
           EGE+YQNHTHPSHSNSRRRKGIPQRAPF
Sbjct: 181 EGEIYQNHTHPSHSNSRRRKGIPQRAPF 206

BLAST of CmoCh12G008180 vs. ExPASy TrEMBL
Match: A0A0A0LY15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136780 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.9e-80
Identity = 162/214 (75.70%), Postives = 174/214 (81.31%), Query Frame = 0

Query: 3   IPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDC-HRRSFCFYCRSDLHHDHRVIQIRR 62
           IP WLE LLST FF  CP HK APRSECNMFCLDC H  SFCFYCRS+ HH H VIQIRR
Sbjct: 4   IPRWLECLLSTTFFNACPSHKQAPRSECNMFCLDCSHSSSFCFYCRSNKHHHHHVIQIRR 63

Query: 63  SSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLL 122
           SSYHDVVRVAEIE VLDISE+QTYVINSARVLFLNERPQPKSS SKGG+H+CEIC+R LL
Sbjct: 64  SSYHDVVRVAEIENVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHVCEICTRSLL 123

Query: 123 DPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVR 182
           DPFRFCSLGCKV     N DS FY   + +EEV      +GRRLG +EE+EEEEE LRV 
Sbjct: 124 DPFRFCSLGCKVIGIKTNMDSGFYLRGKNNEEV------LGRRLGSKEEDEEEEEGLRVG 183

Query: 183 RN---QEGELYQNHTHPSHSNSRRRKGIPQRAPF 209
           RN   +EGE+YQNHTH SHSNSRRRKGIPQRAPF
Sbjct: 184 RNEEEEEGEIYQNHTHSSHSNSRRRKGIPQRAPF 211

BLAST of CmoCh12G008180 vs. ExPASy TrEMBL
Match: A0A6J1DG68 (uncharacterized protein LOC111020539 OS=Momordica charantia OX=3673 GN=LOC111020539 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.9e-80
Identity = 160/214 (74.77%), Postives = 176/214 (82.24%), Query Frame = 0

Query: 1   MVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIR 60
           M++P WLESLLST FF++CP HKDAPRSECNMFCLDC   SFCFYCRS+ HHDH VIQIR
Sbjct: 1   MIVPPWLESLLSTGFFFLCPSHKDAPRSECNMFCLDCPHGSFCFYCRSNHHHDHHVIQIR 60

Query: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGG--THMCEICSR 120
           RSSYHDVVRVAEIEKVLDISE+QTYVINSARVLFLNERPQPK+SASKG   +H+CEIC+R
Sbjct: 61  RSSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKNSASKGSSQSHVCEICAR 120

Query: 121 CLLDPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEEL 180
            LLDPFRFCSLGCKV     N DSNFYP  + +EEV      +GRRLG     +EEEEEL
Sbjct: 121 SLLDPFRFCSLGCKVVGIKNNGDSNFYPRGENNEEV------LGRRLG----SKEEEEEL 180

Query: 181 RVRRNQEGELYQNHTHPSHSNSRRRKGIPQRAPF 209
             RR QE E+Y +HTHPSHSNSRRRKGIP RAPF
Sbjct: 181 LERRKQEAEIY-HHTHPSHSNSRRRKGIPHRAPF 203

BLAST of CmoCh12G008180 vs. ExPASy TrEMBL
Match: A0A1S3CGK9 (uncharacterized protein LOC103500687 OS=Cucumis melo OX=3656 GN=LOC103500687 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.3e-78
Identity = 162/215 (75.35%), Postives = 174/215 (80.93%), Query Frame = 0

Query: 3   IPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDC-HRRSFCFYCRSDLHHDHRVIQIRR 62
           IP WLE LLST FF  CP HK APRSECNMFCLDC H  SFCFYCRS+ HH H VIQIRR
Sbjct: 14  IPRWLECLLSTTFFNACPSHKQAPRSECNMFCLDCSHSSSFCFYCRSNKHHHHHVIQIRR 73

Query: 63  SSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLL 122
           SSYHDVVRVAEIE VLDISE+QTYVINSARVLFLNERPQPKSS SKGG+H+CEICSR LL
Sbjct: 74  SSYHDVVRVAEIENVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHVCEICSRSLL 133

Query: 123 DPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLG---EEEEEEEEEEEL 182
           DPFRFCSLGCKV     N +S FY   + +EEV      +GRRLG   E+EEEEE+EE L
Sbjct: 134 DPFRFCSLGCKVIGLKTNNNSRFYSRGKNNEEV------VGRRLGSKEEDEEEEEDEEGL 193

Query: 183 RVRRN-QEGELYQNHTHPSHSNSRRRKGIPQRAPF 209
           RV RN +EGE+YQNHT  SHSNSRRRKGIPQRAPF
Sbjct: 194 RVGRNEEEGEIYQNHTLSSHSNSRRRKGIPQRAPF 222

BLAST of CmoCh12G008180 vs. TAIR 10
Match: AT2G27930.1 (PLATZ transcription factor family protein )

HSP 1 Score: 215.7 bits (548), Expect = 3.5e-56
Identity = 119/213 (55.87%), Postives = 138/213 (64.79%), Query Frame = 0

Query: 4   PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
           P WLE LL T FF +CP H++ PR+ECNMFCL C   +FCFYCRS  H DH V+QIRRSS
Sbjct: 4   PKWLEGLLRTNFFSICPRHRETPRNECNMFCLSCQNAAFCFYCRSSFHIDHPVLQIRRSS 63

Query: 64  YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPK-------SSASKGGTHMCEIC 123
           YHDVVRV+EIE  LDI  +QTYVINSARVLFLNERPQPK       SS  K  ++ CE C
Sbjct: 64  YHDVVRVSEIENALDIRGVQTYVINSARVLFLNERPQPKNSSHGAASSTPKTMSYFCETC 123

Query: 124 SRCLLDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRV 183
            R LLDPFRFCSLGCKV+                       G R  +EEEEE      R+
Sbjct: 124 CRTLLDPFRFCSLGCKVE-----------------------GMRKNKEEEEE------RL 183

Query: 184 RRNQEGELYQNHTHPSH-SNSRRRKGIPQRAPF 209
           R+ ++ E ++    P+H SNSRRRKGIP RAPF
Sbjct: 184 RKERQQETHKGTHPPTHTSNSRRRKGIPHRAPF 187

BLAST of CmoCh12G008180 vs. TAIR 10
Match: AT1G76590.1 (PLATZ transcription factor family protein )

HSP 1 Score: 164.9 bits (416), Expect = 7.1e-41
Identity = 104/241 (43.15%), Postives = 133/241 (55.19%), Query Frame = 0

Query: 4   PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
           P WL  +L   +F  C +H  + +SECNMFCLDC   +FC YC  + H +HRV+QIRRSS
Sbjct: 18  PPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYCLLN-HRNHRVLQIRRSS 77

Query: 64  YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDP 123
           YH+VVRV EI+K +DIS +QTY+INSAR++FLNERPQP+    KG T+ CEIC R LLD 
Sbjct: 78  YHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPR--IGKGVTNTCEICCRSLLDS 137

Query: 124 FRFCSLGCK---VKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRR-- 183
           FRFCSLGCK   +K + S  +    KH          GR    E E +E     ++R+  
Sbjct: 138 FRFCSLGCKLGGMKRDPSLTFSLRGKH----------GREYEGEWESDEATTPTKIRKTC 197

Query: 184 -----------------------------NQEGELYQNHTHP--SHSNSRRRKGIPQRAP 209
                                        ++ G      T P  +H NS RRKG+P RAP
Sbjct: 198 AFNRLMSGLSISTVKCDYLSGDQPSSSSGDESGFKLSPGTPPIYNHRNSSRRKGVPHRAP 245

BLAST of CmoCh12G008180 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 162.5 bits (410), Expect = 3.5e-40
Identity = 96/213 (45.07%), Postives = 125/213 (58.69%), Query Frame = 0

Query: 4   PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
           P WL+ LL   FF  C LH D+ +SECNM+CLDC     C  C S  H DH  IQIRRSS
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLS-FHKDHHAIQIRRSS 71

Query: 64  YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDP 123
           YHDV+RV+EI+K LDI+ +QTYVINSA+V+FLNERPQP+    KG  + CE+C R L+D 
Sbjct: 72  YHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPR--PGKGVINTCEVCYRSLVDS 131

Query: 124 FRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRRNQEGE 183
           FRFCSLGCK+                  ++R+     L + ++        R+++N   +
Sbjct: 132 FRFCSLGCKISGIS-------------KKKRKEWTNNLSDSDDSYSSTSIGRLKKND--D 191

Query: 184 LYQNHTHPS--------HSNSRRRKGIPQRAPF 209
           +  N   PS           ++RRKGIP RAPF
Sbjct: 192 IMNNSFTPSTPPLSAVNRRIAKRRKGIPHRAPF 206

BLAST of CmoCh12G008180 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 159.1 bits (401), Expect = 3.9e-39
Identity = 102/242 (42.15%), Postives = 136/242 (56.20%), Query Frame = 0

Query: 4   PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
           P WL  +L   +F  C +H D+ ++ECN+FCLDC   +FC YC    H DHRV+QIRRSS
Sbjct: 16  PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVK-HKDHRVVQIRRSS 75

Query: 64  YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDP 123
           YH+VVRV EI+K +DI+ +QTY+INSA+++FLNERPQP+    KG T+ CEIC R LLD 
Sbjct: 76  YHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPR--IGKGVTNTCEICCRSLLDS 135

Query: 124 FRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRR- 183
           FRFCSLGCK+    + + S  +  + KH      RE +G   G E +E     ++R    
Sbjct: 136 FRFCSLGCKLGGMRRGDLSLTFSLKGKH-----GREYLG---GSESDEATTPTKMRKTNA 195

Query: 184 ------------------------------NQEGELYQNHTHP--SHSNSRRRKGIPQRA 209
                                         ++ G  +   T P  +H NS RRKG+P RA
Sbjct: 196 FNRLMSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPPIYNHRNSSRRKGVPHRA 246

BLAST of CmoCh12G008180 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein )

HSP 1 Score: 159.1 bits (401), Expect = 3.9e-39
Identity = 102/242 (42.15%), Postives = 136/242 (56.20%), Query Frame = 0

Query: 4   PTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHRRSFCFYCRSDLHHDHRVIQIRRSS 63
           P WL  +L   +F  C +H D+ ++ECN+FCLDC   +FC YC    H DHRV+QIRRSS
Sbjct: 13  PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVK-HKDHRVVQIRRSS 72

Query: 64  YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHMCEICSRCLLDP 123
           YH+VVRV EI+K +DI+ +QTY+INSA+++FLNERPQP+    KG T+ CEIC R LLD 
Sbjct: 73  YHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPR--IGKGVTNTCEICCRSLLDS 132

Query: 124 FRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEEEELRVRR- 183
           FRFCSLGCK+    + + S  +  + KH      RE +G   G E +E     ++R    
Sbjct: 133 FRFCSLGCKLGGMRRGDLSLTFSLKGKH-----GREYLG---GSESDEATTPTKMRKTNA 192

Query: 184 ------------------------------NQEGELYQNHTHP--SHSNSRRRKGIPQRA 209
                                         ++ G  +   T P  +H NS RRKG+P RA
Sbjct: 193 FNRLMSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPPIYNHRNSSRRKGVPHRA 243

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q1G3Q44.4e-2745.38Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN... [more]
Match NameE-valueIdentityDescription
A0A6J1FD432.9e-114100.00uncharacterized protein LOC111444296 OS=Cucurbita moschata OX=3662 GN=LOC1114442... [more]
A0A6J1HWK11.1e-10895.67uncharacterized protein LOC111468520 OS=Cucurbita maxima OX=3661 GN=LOC111468520... [more]
A0A0A0LY157.9e-8075.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136780 PE=4 SV=1[more]
A0A6J1DG687.9e-8074.77uncharacterized protein LOC111020539 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A1S3CGK93.3e-7875.35uncharacterized protein LOC103500687 OS=Cucumis melo OX=3656 GN=LOC103500687 PE=... [more]
Match NameE-valueIdentityDescription
AT2G27930.13.5e-5655.87PLATZ transcription factor family protein [more]
AT1G76590.17.1e-4143.15PLATZ transcription factor family protein [more]
AT1G32700.13.5e-4045.07PLATZ transcription factor family protein [more]
AT1G21000.13.9e-3942.15PLATZ transcription factor family protein [more]
AT1G21000.23.9e-3942.15PLATZ transcription factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 147..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..208
NoneNo IPR availablePANTHERPTHR31065PLATZ TRANSCRIPTION FACTOR FAMILY PROTEINcoord: 2..208
NoneNo IPR availablePANTHERPTHR31065:SF43PLATZ TRANSCRIPTION FACTOR FAMILY PROTEINcoord: 2..208
IPR006734PLATZ transcription factorPFAMPF04640PLATZcoord: 60..133
e-value: 4.3E-30
score: 104.2

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G008180.1CmoCh12G008180.1mRNA