CmoCh12G007960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G007960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr12: 6649247 .. 6650102 (+)
RNA-Seq Expression	CmoCh12G007960
Synteny	CmoCh12G007960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGTCAGGCTGAAATGGCTATATGGCTTCAAAATGCTTTTTTCAAGGTATGTTGATTGAACTCATAGGTGCTGGGTGAGGGCTTAAAGACCCTAATTTACATAGCCTTCCGTGACACAGATTTTGATTCGGGACGGGTTGATTTTCCTATCAAAAAAGAAATAGGGGATCCGGGCCTTTTTGGGGGGATAGATAAAGGGCATAACATTGGGGTCAGTCACATTTTTTCATGTCCCGGGCCTGATTTAGGGAAAGAACTTTTCCTTTGCTGGTCGGGGAAACCCATTCAAACGCAGAGATGGAGATGGCTCCACTGCGATAAAGGATGAAGGGGAATCCGTAGGCAACTGGTCGTTACTAGAAGATGAGAAAGATGCTGGCTTAATTGATTATAGATTATTAGAAGAGCGAGGTGCAAGTGCTGGCTGCTCAATAGAGGGCTGCGACCCTTCGGACTCTGACTCCACGCACGGGAGGTGCAGGAAACCCCACTGGTGAAGAAGATCCAGAAGATGCTGATCCAATAGGCATAAAATCAGGGGGAATAGCAGAACTCGTGCTCATGGAAGGTAAGAAAGAGGGACGGCGAGAACGAGAAGAAGGATCAAAACAAAGCCTTTCTGAGCCCAGGCATGCCCCTTTAAGAAACAGAAGTTTGCTGCACGAGGTGCATCTGACGTACCTGGGCAGGTATATGAGTATAGCATCAAAAATCAGTATAAGACTTTCATAATCAGGTGGCGATCCAAACAGACACAGATCTCGAGTAATATTGCCAAGCACAGAGGAAGGCGGTTGATGAGAAAGTATAATCAGGTGGAAAAGGATGGAAAAGAAAAGGCCCACAACTAA

mRNA sequence

ATGGGGAGTCAGGCTGAAATGGCTATATGGCTTCAAAATGCTTTTTTCAAGGTGCTGGGTGAGGGCTTAAAGACCCTAATTTACATAGCCTTCCGTGACACAGATTTTGATTCGGGACGGGGAAAGAACTTTTCCTTTGCTGGTCGGGGAAACCCATTCAAACGCAGAGATGGAGATGGCTCCACTGCGATAAAGGATGAAGGGGAATCCGTAGGCAACTGGTCGTTACTAGAAGATGAGAAAGATGCTGGCTTAATTGATTATAGATTATTAGAAGAGCGAGGAAACCCCACTGGTGAAGAAGATCCAGAAGATGCTGATCCAATAGGCATAAAATCAGGGGGAATAGCAGAACTCGTGCTCATGGAAGGTAAGAAAGAGGGACGGCGAGAACGAGAAGAAGGATCAAAACAAAGCCTTTCTGAGCCCAGGCATGCCCCTTTAAGAAACAGAAGTTTGCTGCACGAGGTGCATCTGACGTACCTGGGCAGGTGGCGATCCAAACAGACACAGATCTCGAGTAATATTGCCAAGCACAGAGGAAGGCGGTTGATGAGAAAGTATAATCAGGTGGAAAAGGATGGAAAAGAAAAGGCCCACAACTAA

Coding sequence (CDS)

ATGGGGAGTCAGGCTGAAATGGCTATATGGCTTCAAAATGCTTTTTTCAAGGTGCTGGGTGAGGGCTTAAAGACCCTAATTTACATAGCCTTCCGTGACACAGATTTTGATTCGGGACGGGGAAAGAACTTTTCCTTTGCTGGTCGGGGAAACCCATTCAAACGCAGAGATGGAGATGGCTCCACTGCGATAAAGGATGAAGGGGAATCCGTAGGCAACTGGTCGTTACTAGAAGATGAGAAAGATGCTGGCTTAATTGATTATAGATTATTAGAAGAGCGAGGAAACCCCACTGGTGAAGAAGATCCAGAAGATGCTGATCCAATAGGCATAAAATCAGGGGGAATAGCAGAACTCGTGCTCATGGAAGGTAAGAAAGAGGGACGGCGAGAACGAGAAGAAGGATCAAAACAAAGCCTTTCTGAGCCCAGGCATGCCCCTTTAAGAAACAGAAGTTTGCTGCACGAGGTGCATCTGACGTACCTGGGCAGGTGGCGATCCAAACAGACACAGATCTCGAGTAATATTGCCAAGCACAGAGGAAGGCGGTTGATGAGAAAGTATAATCAGGTGGAAAAGGATGGAAAAGAAAAGGCCCACAACTAA

Protein sequence

MGSQAEMAIWLQNAFFKVLGEGLKTLIYIAFRDTDFDSGRGKNFSFAGRGNPFKRRDGDGSTAIKDEGESVGNWSLLEDEKDAGLIDYRLLEERGNPTGEEDPEDADPIGIKSGGIAELVLMEGKKEGRREREEGSKQSLSEPRHAPLRNRSLLHEVHLTYLGRWRSKQTQISSNIAKHRGRRLMRKYNQVEKDGKEKAHN

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh12G007960 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh12G007960 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh12G007960 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G007960.1	CmoCh12G007960.1	mRNA