CmoCh12G007720 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G007720
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111438459
LocationCmo_Chr12: 6171588 .. 6172108 (+)
RNA-Seq ExpressionCmoCh12G007720
SyntenyCmoCh12G007720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCAACAACTGATCACGTGCATGTACCCGAAGGACCGATTACAAGAAGCAAGGTTAAGAAGATTCAAGAGGCCTATACATTGCATCTTCAAAAGCTAGCTAGTGTACCGGTTGAAACAAGGACTTTTGTGCCCAAAAATCTTTATAACATTCGCATATCAAATCAAGAAGATAATGGAGTGGCTGATATTGGAAAATAATTAGAAAACCTGCCTTTGGTAGTTGAATTACCAATTAAGGAAATTATTAATGCTTTATTTGCTTCCTTTTATATTTAATAGCATTTATTAATAGTTTGTATGAATTGCCTTATATTCTTCAATTTGTATTTAATAGCATTTATTAGTGATTGGTGGCTGAACCATATTATGTTAGGGTTACCTTTTAGACCTATTTAAAGGCATGTAATACTCATGTTTGAAAGATTTTTAGTTGAATACAGAAAAAACCTTTGTGTTTTCTTGATACCCTTTTGGTGTTATTCTTTTTCAAATCTTGCTTTAGGTTTGATGTTTAA

mRNA sequence

ATGAATCCAACAACTGATCACGTGCATGTACCCGAAGGACCGATTACAAGAAGCAAGGTTAAGAAGATTCAAGAGGCCTATACATTGCATCTTCAAAAGCTAGCTAGTGTACCGCATTTATTAATAGTTTGTATGAATTGCCTTATATTCTTCAATTTGTATTTAATAGCATTTATTAGTGATTGGTGGCTGAACCATATTATGTTTGATGTTTAA

Coding sequence (CDS)

ATGAATCCAACAACTGATCACGTGCATGTACCCGAAGGACCGATTACAAGAAGCAAGGTTAAGAAGATTCAAGAGGCCTATACATTGCATCTTCAAAAGCTAGCTAGTGTACCGCATTTATTAATAGTTTGTATGAATTGCCTTATATTCTTCAATTTGTATTTAATAGCATTTATTAGTGATTGGTGGCTGAACCATATTATGTTTGATGTTTAA

Protein sequence

MNPTTDHVHVPEGPITRSKVKKIQEAYTLHLQKLASVPHLLIVCMNCLIFFNLYLIAFISDWWLNHIMFDV
Homology
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BLAST of CmoCh12G007720 vs. ExPASy TrEMBL
Match: A0A6J1EVI6 (LOW QUALITY PROTEIN: uncharacterized protein LOC111438459 OS=Cucurbita moschata OX=3662 GN=LOC111438459 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-05
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 1    MNPTTDHVHVPEGPITRSKVKKIQEAYTLHL 32
            MN T D +HVPEGPITRSKVKKIQEAYTLHL
Sbjct: 1099 MNSTADPLHVPEGPITRSKVKKIQEAYTLHL 1129

The following BLAST results are available for this feature:
BLAST of CmoCh12G007720 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh12G007720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EVI61.3e-0587.10LOW QUALITY PROTEIN: uncharacterized protein LOC111438459 OS=Cucurbita moschata ... [more]
BLAST of CmoCh12G007720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G007720.1CmoCh12G007720.1mRNA