CmoCh12G006550 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGTTGGACTGTGCAACGATCGAAATTTGGATGGAAACAAATGATTTTTTTTTTTTCGAAATTAATTCGTAATAATCTCCGGATCCAAATGTTCTTCGCTAGCTCATAAACTCCTCAAAATTAGCTGGATTTTTTTTTCATCCGAAGAACAAAAGATGGAGAAATGTAAAAAAAAAGAAAATACAGAACACTTTCTGAAGTCCTGAAAGGAATTCGCAGGTTCTTAATTCTGAATTTCTTCAATTTTTTCAATTTCCCTTTTGTTATTTGCTTCCTGATTCTTCAGAAAATGTCAGGTTAGGGTTGCAAAATCAAATTGATTACGCTACCGGTTGCTATCGAATGATTCGAAATTGAAACCGGTTTTTATTGTACTCGATTAGATTTTCGTTGAATTTATTTTGACTCGTGATTGTTTATGGAATGTTTGTTTTTTCTTATGAAAATTTTACAGGGTTTGTTTCCGGGATTTCTTTGACGAGTGTAGGTCTTTGCATGGGCAATCCATTTTTGAGGTTTGCAAGGACTTGGTGGCGTTGTTAAGATGTACAGGACAGTGGCTACATCTGCGGCCACAACCACAGCAACAACAACAACAGATAGCGTTGATTATGTTGTAAATTTGGATCAAATTCCACGGTGGAGTGATGCAGAACATAGGTCTTCATTGGAGTTCGTCAACGAAGATCCTTCCTTCTCTAATTCGTATTTTCCTGATCCTCTGACGTCTCCATCTGACGCGGAGGGCGGTAATTATCGAGTGGTTTCGAGATTTCCCGTCGATCATGAAATTAATTCCAAAATATATCTGTGGCGGGGGAATCCTTGGAATCTCGAGGTAGATGCTGTCGTGAATTCTACAAACGAGGTGAGTGTTATGTTCTTCATCTCCTTCCTTCTGCAATAGAAAACCTTAATCAAATAAACAAAAGGGAAAGCAATGAGATGCTAAAAGTCCCAAGAACTCAATAATAGTTCCATTAGAACACACGGGACAATCTCAGCCCCGAGTTCTGTACAGTTCAAAGAAGAAGAAAAAACATAGACATAGTTGCAAGCACAATTCTTCAATGGGTACTAATTATCCCTCGTAATCATATGGTTTTATGTGGTTGAGCTTTAAGGTGGGTATCATTTGAAGTGGCATATATTAGTGGGAAAATTAGTTGAAATTGAAAATCTGTTGATTATTATGTTTTGGTATGGCTAATCCACTACGAAACGTATGCATATTTCACATGGGATAAAGTGCCCAAAACTGAAATGCCTGAGCTTAAGCAACATTTAAATTATGGGTGGATTGAAAGTTTTGTCTGATAAAGTTGAAAGGACATAAGTCTGTCCTGTAACATAAGAGATAGAAGATGAGAGCTTCATATCCTCCATTAGTGTTGACTTTTGACTACTGGAAGACGTACTTAATTCCAAGCACCGACCATCATCATCATAGTAGAAAATCATCTTCTCTAACATTGCACCATACCAACCAAGGCAATTATTTTTACGAATTGTTGTATGAGATAATAGAGGAAGTAGGATAGTACATTGATATTTACCTTTATGAAGAGTGAGGGGAGATCATCACTTGTTCCTCTATTTAATGATGAAGGACCTTTTGGTTCAAGACATGCACCTGGAAGTTGTCGGTTAGAGTAATTGAGTTATTAGTGGGTGAATAAGAATTGATATTGAGGAAGATGGATTAGGGAAGACAACCCTAGGTAAGGGGAAAACGAACAATATAGGCAAGAAGATCGTTGCCCTCCCATGTGCTCTTCCTTAACTACTAGGAGAGATGATCAAAAGAAGAAAAATAAGCATCTTTAAAGAAAGTAAGATAAGGTAGTACAACATTTAAACTAGGATAATAGTAATTCCCTTTTTGAACTAAAGATAACCGAAGAAAGTACATATCAAAGATTTTGGGTTTAAACTTTGTGAATCCAAAGCAAACAAGTATAGGCTAATATTTTTGGTCATGAGAAATAAAGGCTTTAGAGGCTTTATAGGAACAAATCCTAACATGAAATTTCGCCAATCTGCATTCAAGCTATTGAAGGAGTTTTATGAAATGGTACAGGAATTTCAGATATTCAAGTAACTCCTCCACAGTCACCATGATTTATCAAACCAACAACCTGACTCTTGATTGAATTGGTTATCGTCAAGACCAAACTGGCATCAACTTGGAACCAAGTTCTTCTAGTGTCATTAGTTGATGGATAGGTCATGTCACATGAGTGTATGATGGAAACCCATTCCATAAACTTGGTGGATAAAATTAAAAACCAGAAACTCTAACCATCTTCTGAAGTGGTTCCACATGATGATCAAGCTTAGCACACAGACAAAATGAGAATGTGAGATGTTGAGACAAGAACTAGTAATGAAAGTAAACAGAAGTCGGACTTACTCACTATATTATGCTATTTGGTTGCTATCTTTATTGTATTGGGTTTGAATAAGTTAAATTTTATGTACAATTGTCATGCCTCTATAGGATGTAGAGATGCTTAGCTCATTGTTTATGACTTGACAGTATCTCAATCTATTCATATTGAAAGAAAATGAAGAGGTTGTCAGCACAATTGTAGGCATGGTGGTGGTCTATGGCCTATCACTTTAAAACCTCTTAGCATAAAAGCCTGTTTGGTGAGAGTTATGTTGTTGATACTGGTTGATCTGCAACACGGATTTGTATCTGTAATCAGAAAACTCCTTTTCCGGTTAAGTTTATATAAAATGAAATAAGCTGCTAATTTCTATATCTGCCATCTTTAATGATTGTAAAATTAAATTATACAGAACTTGGATGAAGCACACAGTAGCCCTGGTTTGCATGCTGCAGCAGGACCTGGTCTATCAGAAGAATGTGGAACACTTGTACGCCTGTGATTCTATTTACTTCAGTTTAGCCTTTGTTTATTGTTTTTTCCCTGATTAAGAACTGGAAATATTCACAAATTAACATATGCATATATCTTATAAGAAAAAACTGTGGATAGTTTTGGCCTTTTAGAGGTACAATGGAGGACTGCACTATTTTCAGAAAGATTTCTTTATAGAACTTCTTTAGACAATAAGAATGTCAAAACCTGACTCATTATATACATTTCACATCCTGAAGGGTGGTTGTCGCACAGGAATGGCAAAAGTCACTAATGCTTATGACCTTCCTGCTAGGTGAGTATGCAGTTGATGTTTGGATCTAGAGTAAAGACCTATACATCCATTTAATCTTTGGCATTCTCTTTTAGGAAGGTCATGCATACTGTAGGTCCAAAATATGCTGTCAAATACCATACTGCTGCAGAGAATGCTCTGAGTCATTGCTACCGTTCTTGCCTTGAACTTCTCATCGAAAATGGGCTTCAGAGGTTGTGAAAGTAGTTGATGCCACATTATTTTTTTTCTCCATATCGTTTGCTCATCTCATGCATCTCTTGCCATTTTTAGCTTACATGTTAATGACGATTTAATGCAGCATTGCTATGGGTTGTATATATACAGAGGGAAAAAACTATCCTCGTGAACCTGCTGCTCACGTAGCAATAAGTGAGATATTTTCCTACATGTTCCTTTAAGATGTCTATGTTTTTCTCTATTCTACTATGATTCAATTTTCTTGTGCTACTTTTGTTCACAAATTATGGCATCCATTAACTGCCAATTTACCTAGTATGTTTAGCTTAGTAGGGATGTTATCAGGGCGGGGTAGGGGCTCGGAAGTATTTTGGAGCTAACCTACTAGGGAGTTGGGCTTGAGGACTTGCACTGATCCATGCTAGCAAGCTCTGGTATAAGAAACACAAAATTGTGAAAAGTTTTCTAAATTTTTTATCACTTCTTTATTATTTTTCTTTGATGGTTATAGGTCCATTTGGATCTAATCTTTACGATTTGTGATTGTTACCAACTTGCATTCTGTAAATCAGCATAGCGATTGCATTTAAATCATCGGAGATGATGAAATTTCCAGTAGGTAGCGGAGGGAAAGTAAAGAAAATTTAACATCTTATCCTCATTTTTATTTTGCTTCTTCTTCTGTTTAGGAACTGTGCGTCGTTTTCTTGAGAAGCAGAAAGGTAAAATTAAAGCTGTTGTATTTTGTACAACATCATCAATCGATACTGAAATATACAAAAGGTACTTCACTTTCAAGTAACTGAGGCCTGTCATTCCTAAAGGATATATTTTCCATGCCGTATACAATATAACAATCCTTGTTGCATTTATTCGATTTGCTTTTATATGTTTCTGAGCCAGGTTGCTTCCTCTGTACTTTCCCCGTGATAAACACGAGGAAGAAGTTGCATTGTCAAAGCTTCCTGCAGATGTTGGAGATGAGAATGGTGAGACTATTATAGATGAGCGGAAAATCAGGATAAACACTTTGCCCAAAAAGAATGTTCTGAAACCTCCCCAAGTTCCCGATGATCCTCCTGTCAGTCATGTAAGGTTGACACAGAGGTTAGTGTAATGATTTATGCAATGTAACAGTTCTTTTTCAAAAAATATTTCGTCTTCTATCTGATGGTAGATTCATGAAAATTGCATACCTGTATGAGTCAGAGTTGCCCTGAATTTGATGACATTGATCTGTGGCATCTACTTTATCTGCGTTTATCATGACTCCCAGGCCAGTTATATTTATTTGAAAGAAACGAAATTATACTGAAAACCTGAAAATCACGAAGGTAGAGCAATCCACCCTACAAGCTATGGGGATCACCAAAGTGGACCCCTATCAGCAAAAGTACGAGGAAGATTGTAGTTACAAAGATCTTGATGAAGAGAAAAAGTGCAAGGTTTCTTGCATTCTACAACTCCGAAGGGAAGGTCGTGATTGCATCAGACCATTTGTTTTTTTTTTTTTTTTTTTGATATTCGTCGAGTGGGTGGGCTAGCTTGACTATTCTCATAGAATAACTACTTGACTTTCTACATTTGGTTGTCAAGGTAGTTGTAAGATATTAAATCCTAGATAGGTGACCACCATGGCTTGAACCCATTATCTCTAGGCTCTTTGTAATCTCTAAGGTTGACTCTGAGAAAACTTTATGATCATGTTGATTAGATCTTCTTGGATACAAAAGAAGGGTTTTGGGATGA AGTTGGACTGTGCAACGATCGAAATTTGGATGGAAACAAATGATTTTTTTTTTTTCGAAATTAATTCGTAATAATCTCCGGATCCAAATGTTCTTCGCTAGCTCATAAACTCCTCAAAATTAGCTGGATTTTTTTTTCATCCGAAGAACAAAAGATGGAGAAATGTAAAAAAAAAGAAAATACAGAACACTTTCTGAAGTCCTGAAAGGAATTCGCAGGGTTTGTTTCCGGGATTTCTTTGACGAGTGTAGGTCTTTGCATGGGCAATCCATTTTTGAGGTTTGCAAGGACTTGGTGGCGTTGTTAAGATGTACAGGACAGTGGCTACATCTGCGGCCACAACCACAGCAACAACAACAACAGATAGCGTTGATTATGTTGTAAATTTGGATCAAATTCCACGGTGGAGTGATGCAGAACATAGGTCTTCATTGGAGTTCGTCAACGAAGATCCTTCCTTCTCTAATTCGTATTTTCCTGATCCTCTGACGTCTCCATCTGACGCGGAGGGCGGTAATTATCGAGTGGTTTCGAGATTTCCCGTCGATCATGAAATTAATTCCAAAATATATCTGTGGCGGGGGAATCCTTGGAATCTCGAGGTAGATGCTGTCGTGAATTCTACAAACGAGAACTTGGATGAAGCACACAGTAGCCCTGGTTTGCATGCTGCAGCAGGACCTGGTCTATCAGAAGAATGTGGAACACTTGGTGGTTGTCGCACAGGAATGGCAAAAGTCACTAATGCTTATGACCTTCCTGCTAGGAAGGTCATGCATACTGTAGGTCCAAAATATGCTGTCAAATACCATACTGCTGCAGAGAATGCTCTGAGTCATTGCTACCGTTCTTGCCTTGAACTTCTCATCGAAAATGGGCTTCAGAGCATAGCGATTGCATTTAAATCATCGGAGATGATGAAATTTCCAGTAGGAACTGTGCGTCGTTTTCTTGAGAAGCAGAAAGGTAAAATTAAAGCTGTTGTATTTTGTACAACATCATCAATCGATACTGAAATATACAAAAGGTTGCTTCCTCTGTACTTTCCCCGTGATAAACACGAGGAAGAAGTTGCATTGTCAAAGCTTCCTGCAGATGTTGGAGATGAGAATGGTGAGACTATTATAGATGAGCGGAAAATCAGGATAAACACTTTGCCCAAAAAGAATGTTCTGAAACCTCCCCAAGTTCCCGATGATCCTCCTGTCAGTCATGTAGAGCAATCCACCCTACAAGCTATGGGGATCACCAAAGTGGACCCCTATCAGCAAAAGTACGAGGAAGATTGTAGTTACAAAGATCTTGATGAAGAGAAAAAGTGCAAGGTTTCTTGCATTCTACAACTCCGAAGGGAAGATCTTCTTGGATACAAAAGAAGGGTTTTGGGATGA ATGTACAGGACAGTGGCTACATCTGCGGCCACAACCACAGCAACAACAACAACAGATAGCGTTGATTATGTTGTAAATTTGGATCAAATTCCACGGTGGAGTGATGCAGAACATAGGTCTTCATTGGAGTTCGTCAACGAAGATCCTTCCTTCTCTAATTCGTATTTTCCTGATCCTCTGACGTCTCCATCTGACGCGGAGGGCGGTAATTATCGAGTGGTTTCGAGATTTCCCGTCGATCATGAAATTAATTCCAAAATATATCTGTGGCGGGGGAATCCTTGGAATCTCGAGGTAGATGCTGTCGTGAATTCTACAAACGAGAACTTGGATGAAGCACACAGTAGCCCTGGTTTGCATGCTGCAGCAGGACCTGGTCTATCAGAAGAATGTGGAACACTTGGTGGTTGTCGCACAGGAATGGCAAAAGTCACTAATGCTTATGACCTTCCTGCTAGGAAGGTCATGCATACTGTAGGTCCAAAATATGCTGTCAAATACCATACTGCTGCAGAGAATGCTCTGAGTCATTGCTACCGTTCTTGCCTTGAACTTCTCATCGAAAATGGGCTTCAGAGCATAGCGATTGCATTTAAATCATCGGAGATGATGAAATTTCCAGTAGGAACTGTGCGTCGTTTTCTTGAGAAGCAGAAAGGTAAAATTAAAGCTGTTGTATTTTGTACAACATCATCAATCGATACTGAAATATACAAAAGGTTGCTTCCTCTGTACTTTCCCCGTGATAAACACGAGGAAGAAGTTGCATTGTCAAAGCTTCCTGCAGATGTTGGAGATGAGAATGGTGAGACTATTATAGATGAGCGGAAAATCAGGATAAACACTTTGCCCAAAAAGAATGTTCTGAAACCTCCCCAAGTTCCCGATGATCCTCCTGTCAGTCATGTAGAGCAATCCACCCTACAAGCTATGGGGATCACCAAAGTGGACCCCTATCAGCAAAAGTACGAGGAAGATTGTAGTTACAAAGATCTTGATGAAGAGAAAAAGTGCAAGGTTTCTTGCATTCTACAACTCCGAAGGGAAGATCTTCTTGGATACAAAAGAAGGGTTTTGGGATGA MYRTVATSAATTTATTTTDSVDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSPSDAEGGNYRVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLDEAHSSPGLHAAAGPGLSEECGTLGGCRTGMAKVTNAYDLPARKVMHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLQSIAIAFKSSEMMKFPVGTVRRFLEKQKGKIKAVVFCTTSSIDTEIYKRLLPLYFPRDKHEEEVALSKLPADVGDENGETIIDERKIRINTLPKKNVLKPPQVPDDPPVSHVEQSTLQAMGITKVDPYQQKYEEDCSYKDLDEEKKCKVSCILQLRREDLLGYKRRVLG Homology
BLAST of CmoCh12G006550 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 7.0e-49 Identity = 116/277 (41.88%), Postives = 162/277 (58.48%), Query Frame = 0
BLAST of CmoCh12G006550 vs. ExPASy Swiss-Prot
Match: Q66HX8 (Ganglioside-induced differentiation-associated protein 2 OS=Danio rerio OX=7955 GN=gdap2 PE=2 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.3e-42 Identity = 101/235 (42.98%), Postives = 140/235 (59.57%), Query Frame = 0
BLAST of CmoCh12G006550 vs. ExPASy Swiss-Prot
Match: Q5CZL1 (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis OX=8364 PE=2 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.1e-41 Identity = 106/269 (39.41%), Postives = 149/269 (55.39%), Query Frame = 0
BLAST of CmoCh12G006550 vs. ExPASy Swiss-Prot
Match: Q5XGM5 (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis OX=8355 PE=2 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 4.1e-41 Identity = 103/269 (38.29%), Postives = 150/269 (55.76%), Query Frame = 0
BLAST of CmoCh12G006550 vs. ExPASy Swiss-Prot
Match: Q9NXN4 (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens OX=9606 GN=GDAP2 PE=1 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.1e-40 Identity = 101/269 (37.55%), Postives = 150/269 (55.76%), Query Frame = 0
BLAST of CmoCh12G006550 vs. ExPASy TrEMBL
Match: A0A6J1GJF0 (protein GDAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111454405 PE=3 SV=1) HSP 1 Score: 577.0 bits (1486), Expect = 5.4e-161 Identity = 291/311 (93.57%), Postives = 295/311 (94.86%), Query Frame = 0
BLAST of CmoCh12G006550 vs. ExPASy TrEMBL
Match: A0A6J1KPN2 (protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496470 PE=3 SV=1) HSP 1 Score: 569.7 bits (1467), Expect = 8.7e-159 Identity = 288/311 (92.60%), Postives = 292/311 (93.89%), Query Frame = 0
BLAST of CmoCh12G006550 vs. ExPASy TrEMBL
Match: A0A6J1D9R1 (protein GDAP2 homolog OS=Momordica charantia OX=3673 GN=LOC111018520 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 4.8e-149 Identity = 274/311 (88.10%), Postives = 283/311 (91.00%), Query Frame = 0
BLAST of CmoCh12G006550 vs. ExPASy TrEMBL
Match: A0A6J1G3J6 (protein GDAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450452 PE=3 SV=1) HSP 1 Score: 533.9 bits (1374), Expect = 5.3e-148 Identity = 276/312 (88.46%), Postives = 282/312 (90.38%), Query Frame = 0
BLAST of CmoCh12G006550 vs. ExPASy TrEMBL
Match: A0A1S4E5F4 (protein GDAP2 homolog OS=Cucumis melo OX=3656 GN=LOC103503322 PE=3 SV=1) HSP 1 Score: 531.2 bits (1367), Expect = 3.4e-147 Identity = 271/311 (87.14%), Postives = 281/311 (90.35%), Query Frame = 0
BLAST of CmoCh12G006550 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein ) HSP 1 Score: 422.9 bits (1086), Expect = 2.5e-118 Identity = 229/345 (66.38%), Postives = 255/345 (73.91%), Query Frame = 0
BLAST of CmoCh12G006550 vs. TAIR 10
Match: AT2G40600.1 (appr-1-p processing enzyme family protein ) HSP 1 Score: 58.2 bits (139), Expect = 1.6e-08 Identity = 40/130 (30.77%), Postives = 67/130 (51.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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