CmoCh12G006540 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G006540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein GDAP2 homolog
Location	Cmo_Chr12: 4253517 .. 4262976 (-)
RNA-Seq Expression	CmoCh12G006540
Synteny	CmoCh12G006540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCTGCACTTAGGTCTCTTCTGAAATAGTTTTGTTTCGGGATTTAGGTCTTCTCGATCCTTGTTGCATCTGTTAAACGTATTTTTACTTGACTAATGGTGCATGGTATTTTAGGAACCCATCATATTTGGATTCATACCTGGATCCTGCTTTCATGGCTTTAATCAAAGATCCGGATCAAAGACGCAAGGAACAATGGGAAAAAACTGCCCAGGCTCAGACTGGATGGAATTATGGTAGAATACTTGGATTTGGTGAACTTGGTGGAGCTCCTTTATCTGCTGCTGAAGAATACTCACTTCATTCAAGATACCTTGCTAAAGCAAATTCTCTTAATCTCTCTGAAATTGGGGAGATGAAAATTGTGTGAGTATCAAATTTCTTGTTTGTTTCCACATGCTTATGTATATAGTGGTTCGCTTAAATTTTGTATACTTGATAATAATTTATGCTTTCTTTGCTGAAATCATTTATCCAAGGATAGTTTCTCTTGAAGTTCTGGATCTTCAGAGCAATTAGTATTGATTTTACTTCTCTTCGGTCTTCACTTTTTGAGGAGCTTTGTTACTTTTGCCTTTGTCTAGAACATTTCAAGGAAGTTGATTTCTTTGAGTCATTAGAGTTTATATGTGCCAGTGGTTAATCGAAGTGTATATCGAGAAATATCATGTTGTTTCCCATTACGGAATGTACCGAGTTCTAGTTTATGTCTCTCTTGGGCATGTTAATTAGTCAGACGTTTGTGAAAACCAGTTGAGTCAGATGCTTATACTGAACATATTCGGTTTGTGCATTTCTGATTATATTACTAGCTCAAGATGCATATAATTATACTCTATTGCAGTTACCGTGGTGGAGTTGATAGCGAGGGTCGCCCTGTTATGGTCGTTGTGGGAGCACATTTTCTACTGCGTTGTCTCGACCTTGAGCGATTTGTGCTCTATGTTGTAAAGGTAATTTTGTTATAATCTTGAATAATATGTTTTTGTTTCTTATATTGAATTTTTATATCTTTAGACTTCTGATTAAGCCTTTGGTGGCGCGGTGGCTAATGGCATTAGGGGGCCAAGCCATATATGAGGCTAGCCTCATTTTCCTTGTTTATAATTTCATTCTCTTTGTTAGTTATTAACTTCTTAGTTGATTCGTATTTATTGATTTGTTGTAATATATTCCCGGAAATTGATTTCCTTATGGTGTTTCTTCTATTTAAGAAACCCCTTTATTCTCATGATAAAATAGATAAGAGTATTATTTCTCTTATATTTTGCACTGTCATAAGAGCATTAGGACCCTAAAAAACCAACCCTAAGCCTGGTCATTTCTGCCGCCCGTTCGCATTTACCGAACACCACCCTCACCCGGTCTAAGTTCGCGTCTCCTTGGTCTCCACAAAATCAGTCTTCATTCATGGATTCACATTCTTTGTTCCAGTTTCATACACGGATTTGGGTGGGTGTTTGCACATGAGTTTGTTGCTGCTTTGCCGTCATCCACCACTGTTACAGCTTTCGTCGTTGACCACCACAACTTGTACCATCAACGCCATTGCCTGTACGGTTGATAAGCCGCACCACCACTATTGGTCAGCCAAGTGTTGTGCCCTTCTGCCATGTTTCTTGCCCTGATTTTTTGGTTCTCTGTTATCTTTTTTGGCTGCTGTTTTTTGTGGGTTTGGTTTCTGTTTCTTGTTCAGTTTTGAAATTTGTTGCATCAATACACATCCCAGTCCTTTCTTAGTTGCATCGCTGTAGATCACGTACCCTTTAGAACTCTTGGGTACTGTGAGTACTGGGGCGGTTATCAACCTCTGTTTTAGGTCTTGAAGCTTGCCTCACAAGCATTGTTCCATGCAAACGGTACACCCTATCCTAGTGAAGTCCTGCACAAACCTTCGATAGTATCCCGCCAACCCTAGGAAGCTTCGCACCTCTGTAACTGTAGTTGGGCGTTCTCACTTCGTAACGTTTCAACTTTAGTGGGATCTATGGATATTTCGTCCTTTGACACCACGTGTCCTAAGAACGAAACTTGTTGCAGCCAGAACTAACATTTAGAGAACTTGACATACAACTTGTTCTCCCTCAGGGTGGTCAAGACTTTTCGTAGGGGTTCTTGGTGTTCTAAGTTTGTTTTCGAGTATACAAGGATGGTGTGTATGAACACGATAACAAATGTGTACAATAGTCTTTGAATACGCGGTTCATTAATTCCATCAACATAGCTGGGACATTGGTGAGACCAAACAACATCACTACGAATTCGTAGTGACTGTATTTTGTTCTAAGAAACACTGTCTTTAGTACGTCTTTTTCTTTAATTTTGATTTGGTGGTAACCTGACTGAAGGTCTATCTTAAAGAATATCGTTTCCTCCCTGAGTTGATCGAATAGGTTTTCTATACGAGGCAGAAGGTATTTGTTCTTTATTGTTCTCTTATTTAGCTCTGTATAATTGATGCACAGACGCATCAATCTGTCTTTCTTTTTGACAAACAACACTGGCGCACCCCAAGGGGATATGTTAGGTCGAATGAAACCTTTGTCCAATAGCTCTTGTAACTGTGCCTTAAGTTCTTTCACCTCCGCTAGCGCCATACGATAGGGTGCTTTGAACATAGGTCTAGTTCCCGGTTCGAGTTCTATAGCGAAGTCGACCGCTCGGGAAGGGGGTATTCTTGGTAGGTCTTCTAGAAATACGTTGGGAACTCATTTACTATTGGTACGTTGTCTAAGGTCTTTTCTTTTCCTCTTACATCTAGACACATGCTAATATAGCCCAACCGCCTTGTTGGACTAGTTTCTTTGCTTTCATCATCGAGACTACCTTTGGAGCAGTCCTAGAGCTTGTGCCTTTAAACTTAAAACTGGCTCCTGCTAGTGGTGAGAATACTACCTCCTTTTTGCGACAGTCTATAGTAGCACGGTTTTCAGCTAACCAATTCATGCCTAGTATTACGTCGAAGTTAGATATGTTAACTACTATCAGGTCTACACTTAGGTTTTAGTCTGTTATGATTACTTGACCATTCTTTACTAGCCTAGATCTACCCCGGAGGGGTGCTTACAACCAATTCATGCAATAAGGGTTCTAATTCATACCGTGTGTTTGTGCAACAAAAAGCATAGAGATAGAATCAAATAAAGTAAAAATGTAATGACCTAAAATGGGTAGTGTACCTCACCACGGTATCGGACCTCCCAGTGTCCCTGTTGGTGGATGCATATGCCTTAGCTTGAGCTTGTGTTTGCACCAGCTGGTCCGCCTCTTCCATTGCTCTAGGCGGGTTAGGTTGGGTTTCGGTGTCCTTGGTCGTGCAGTTGACAGTGATGTGACCTTGACCACATCGATAACGGGCTTGCGATCCAACCATGCACCTTTATCCATGCATTCTTCCACATATCCTACACCCCGCTTCTCCCCTTCCTCTAGCCCCATCCTGATTTACGAGGTTTCGTTCAGTGCGTCAGGGAGGGTACCTCTCATTCTATCATAGGGCAGGTCTGTTGTTATAGCGGGGCCTACACTGAATCATGTGGACGCTTACGTCCAATTGTTACTGGTTGTTCCCGTCGCGCCTCATCCTTAGGTTTTTCTAAAGCCTTGGCAGTTCTCAAGGCTTCGTCATAGGTCTTTGGATATATGGCTTCCACCGTGCAACGAATCTTTGGTTCCAAACCCAAAACAAACTTCTCTATTATCTTCTGCTCTTGTGTCAACCAAGGACGACGTGAATCTCTTCAGCCTCATGAACTCTCTATCATATTTCTCTATGGTAAGTCCGCCTTGCACTAGATGGACGAACTCTTGTTGTCTCTTGAGCTGTTCCGCCTTAGGATAGTTTTGTTTAGGAAAGCTTTCTTAAACGGTTTCCACTCCATTGCTCTCCCGCTGGGTTTAGACTCTCTTTGTTGTCCCTCCACCACACTTCAGTGTCCTTCTGTAGGACGAATGTCACACAGGCGACCTTTTGGTTATCAGGACACCCCATCGACTTAAATATGGTTTATACAGATGAAATCCACGTCTTTGCCTCTATTGGATCCTTTGAGGTACTGGTGAATGTCGAGGGTCGTACTGCTTGAAGTCCTTTAGCCAGTTTGCCCCTCTAGTAGGTTGCAGAGGGTTAGCCGGGGCGTTGGCCTATTGGGTGACTATTAAGGTGTGGATTAAGGCCTGGAGAGACTCCCACATCAGTCTGGTAGTAGCGTCTACTCCAGCCACAGGGGCCGCAGCCTTAGGTGTGGCTTGCCGTGGCGGCGCAGGTTGTGGTGGTGGTGCATTTTGTGGTGGCACAAATGGTTGCAAGAGGTGGAGGAGCAACTCGTTGCGGCGGCATAGCTGTACCCGATCCAGTCTATAATCCTTCTCGAGGTGGGTTCTCTTCAGCCTCACCTTGTCCTCTTCCTCTAATAGGGTGTAACGACCCACAGACCCACCGGTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCAGGCTTCCCCTCAAGGCTTTAAAACGCATCTACTAGAGGAAGGTTTCCACACCCTTATAAAGGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATCCACCCCCCTTCGGGGCCCAGCGTCCTCGCTGGCACTCTCTCCTTCCTTCAATCGATGTTGGACCGCCCCTAAATCCACCCCCTTTAGGGCCCAGTGTCCTTACTGGCACACCGCCTCGTGTCTACCTCCCTTCGGGGAACAACGAGAAGGCTGGCACATCGTCCGGTGTCTGGCTCTCATACCATTTGTAACGACCCAAATCCACTGCTAGCAGATATTGTCCTCTTTGGGCTTCCCCTTTCAGGCTTCCCCTCAAGGCTTTAAAACGCTTCTACTAGGGGAAGGTTTCCACCTCCTCCCCAACCAATGTGGGACATCACATAGGAGATCGTCCCCTTCCTCGTTTTCCTCTTTTACATCCTCTAGACGGCATGGTTCTAGAAACCAAGATAACGTTACTTAATTCTAAGGCTCATTACTATGAACATATACTATATCTCACGTCATCTGATTTCACATCATATTGAATCAATCAACATGCTACAATCACATCATACTCTTTAATTTAAAGCACATGGAATGTCAATTCAACACAACGACATTGTAAAAACAATTGCTTGCGAGTTTCTAAAAGCATTTACTTTTTCTTATCTTATGCAAGGTATACCTGAACGGTGACGGTGCATCGACGTTTGGACCATAGGATGTGCCAAAAGCCTATGTCGTAGGCTAGTCTACAAAATCTATAACCTAGAGCTTTGATACTAACTATAACGACCTTAAATTTCTACTTACTCAGAATCGCTACTAACATCTCATGCTCAACTCGTATGCAGAATTTAACTCTTAAAAGAAACATCATTTATACATAAATATCAAAAAATTTAAAAACAACTTTATCTCTGGAAAACACGGTCGTGGTCTTATATGTTTCATACGAAATACTAAAATTTAAAATAAAATAAATATCAAATAATTTAAAACATATGAAATGCAAGACAACCTATTCTAACCTAAGACTAGGAATTTAAATATGCAACTATCCTATGCATGTGTCATGGTCTCTACTCGCGATGTTGCCATCATCCGTATATGGGTGCCTTGCCTTCACCTGAAAAATGATATGGCACACGGCTTGAGTATTTCGAAAAATACTCTGTAAGTGACCCCACTATAGGGGCCATGTTGAATGCAAACACATGCAAATATGCTCTAGGGACCTATCTCTATCTCATACTAGGGGTAGCCTTCAGTCGGGACTAACTTGGATCTGTAGGACTTTCCTACACACAACCCACACGTGCGAGTGTGAATCCCCAGGTGGTTCACACCCCACCTGGTCCCATACTGGTCAAGCTATCTGTCTGACGTTCGGAGGTCAGTAGACCCTTGGGTGTCATGCTCAACATGATCATTGTCATCATCATACTATGCACGTCCGCACTCATCATCATAAAGGGAATGTATCCCGATGCTTATGTACACACAACATGCATGAAGTCCCTCGATTTATCGTCTTAAAACATTCTTCTGTCACAACCCTAGTCTCATCTCTATATTACATTTAGTAATACATGCTCATTAGATATTTATATTAATATCATTATTCATGCTCTTAGGGTTGTGTCCTAGGTCGATCTCTCGACATGATGCAACATGACATTCATCATTATAAAGCATGCTTAATATGGAAAACATCATCATATTAAGGTAAACGTCATACATCATAATCATCATAATGTCATCAAATGCATCAAGCACAACAAGTACATCATATATCATCATATAACTCACTTATGTCATCATACATCATCACAGAATTCACGTACGGTATCATACGTCACAGCTCATACATCATACATCATATAATTCACATACGTCATCATAAGTCATCATACAACATAGCTCATACAATTTTTCTACCACATCCTATAGTAAGGCCACTTACTTGGTTGGCCTTAGCCAGCGTTCTCCCTAATTATTATACGTTAGCTCTCGTTCCTCGAAAGCTGTTCCAAACGTTGTTGGAGTTCGTTTCCTATTTTTGAAAGAGATGAATGACATTAAACAAAATTGCACATTGGACATAGTAGAATTACCCAATGATAAGAAACAATAGGACCCAAATGAGTGTTTTCTATAAAGTGCAAAGCCTATGGTAGCTTTGAAAGATTCAAAACCGGACTCGTTGCTTAAGGCTTCACTCAGACCTATGAAATTGGTTAGCAAGAAACGTTTTCTCTTGTTGCGATAACTAACTCTAATGCTTTTCTCCATGGGGAACTTGGAGAAGAGGTATTTAAGAACTTACCACTAGGTTTTGAGGAAGATCTCATCCTTTTGGATAAGGTGCGTAAAGATTTATAGAAACCTCTTCCTTTTGGGATGCTGTGGTGGTGGGTTCTCTTCTGAGTCCAACACCCTTTTGACATAGGATCATTCCGAGTAAATACGGTCTTCAGCCTTTCGAGTGGCTTAACGAACTTACAGAAACCCTTGGAAAGACATTTCTTTCAAGCTCCCTCTCTTCTTTTGTCCAGCAAGGTGGGGGGATGGGAAGGAAACGTACTTCGAAAGGATAATCCGTCAGGGGATAGGCCCCTCTATGCTATGTCTCCCTATTTATACCATTCATCTTTTATGAAAAATTATTATGTGGCTGACTTTCTAGACCCTTGTGGGAGCTCTCCCTCCTCATTTGGTTTCCTTGTCCGTTATCCCGTAGGGAATCAACATACAGCTTAGCTCTCTTATCCTTGATTAGGGAGGTCATTCATAGATAGGGGAGGAAGTTTTTTTTGTTCTTGAGCCCTAACCCGACTCAGGGTTTTTCTTGTCGCGGGTTCTTTTAGTGCTTATATTGAGGCCCTCCTCAATTGGCTAGTTGATTTTTCTTTGTTATGAAAGGTGAAAGTTCCAAAAAAGTTCAGTTCTTCGTTTTACCGATCATCCATGAAAGAAAAAATAAGCTTGATTGACACCCTTTTGACAATCGCAATAAGAATCTTATTTTATTTTTTTCATTTTCGACCGTGATTGAAATGTCTCGGGGAGAATTTAGGCTAATTTATATAAAAAATACTCATATTCTTCCAAAAGGTACAAAAAGTTACAATAATTTTGTTTAAGAGATTATAAGTTGCAATATTACCCTTTACCGTTCATAAGCGTTTCTAAATTACTTGGAACGTTTTTAATTTTGTTCAACCATAATTGAAGAGTGTTAGGAAGTATTTTTGTTTGAACTATGGTCTGTGATATGTCTCCCTTCCATTTCTAGCCAGATTGATAACTTTCTGGAGTTGATTTTGTAACTTGGGGGCTGTCCATCTTTAAGTTCTTGATTCTGTAAAGTTAGGAAAAAAATTACTATATGAAGTTGAAATTCTTCAGAATGTTGGACAGGAAATCGACGGAGCGGTGACTGGAATAACGTGTCGTGACTAGGATGCTTGTTTGGACTAAGTTTATAAGACTCTCATTTAATTTCATTGACTATTCGTCCAACATTCTAATGGTTTTTTTTTTTTTGGTCTACGTGCAATTTTGAAAGTTCAAGAATAGTACGACGACTTTCGAAATAATAGAAGTATTTTTTAACCAAAAGACGAAGTTCCGATATATTTTTTATAATTTAGCCTAGAATTTTTTTCCATTTCAGTTGATTTAACTCTAGTGAATGGTAGCACATGAAACTCTATTCAAAAGTTCATATTTTTGGTTCCTGGTTAACCTCTAATCTTGCCACTACTTTCTGGAACATTCTTTCTTTGCTGTTTGGTGCCGACATTTTTTAGAAGTTATGCACTTAGTCTTGTTATTAAATTCCAGGAATTTGAGCCATTAATTCAGAAGCCTTACACCATTGTGTACTTCCACTCAGCAGCTTCTTTACAGCCGTAAGTGATCTTCTATATTTATTTTAAAACGAGCAAGGAACTTTGGGATGAACACACTTCTATTCAAATGGAAAGCTTAGACAATGAGAAGTTGTGTGCATTTTGTTCTTGATTTTGTATCGGTTAGTAGTCTACTGGAAGTTATTCAACTTTTCTGACCGTGTTTACGGTTTCTATACCGTTAGTCGGCCCGACATGGGATGGATGAAGAGATTGCAGCAGATTCTTGGCCGAAAACACCAGCGAAACCTCCAGGTATGAACTCCAACTTATCCGAATGCTAGATGCGTACTGAGCAAAAATCTCCCTTTATCTTTCTCATCTATCGGTATGATTTTTGTAGGCAATATACGTTCTTCACCCGACTTTCGGATTGAAAGCTGCAGTATTTGCCATGCAATTGCTCGTGGATAACGCGGTAGGCTTAAAGTTTGTTTAAATATCTCGTTTTTAAGCATGGAATGAGATTAAAAGTGTTAGTAACCTGAAGTAACTGATATCCAGGTATGGAACAAGGTTGTGTATATCGATCGACTACTACAGCTGTTCAAATATGTTCCACGAGAGCAGTTGACCATCCCGGACTTCGTATTTCAGTGAGTTCATGCTTCCTTTGAACTTTTATTCAACAATGATTACAAATCCTCGAATTTAGAGGATAGATGCCTTGTATTATGCCTTTGTTCGTGAAGTTTACAATTAAGATAACTTAGATGCATCGTTCTATGATAAATGCAGGCACGACTTAGAAGTAAATGGAGGGAAGGGCCTCATTGTGGATCCTCGAACAAAATACGTATATCATCGACCTTAACATCGAAGAAAATGTATGGATAATTATCCATTAGCGTCTCGTATTAGGTGGGTAGGCGTTGGTTATGTTTGTAGAAATGGCATACCATTTTCTTTCATCCTTATTTTTGTTGAAGTATTGGTTCGTTTGCGTAATGAAGATGAAATAACGTTATTCGTTTTGTATATTATGTCGGATAAGCCTTTTTAATAAAATGAAGAAAAGAAAAAGTTGGTTTGATGA

mRNA sequence

ATGGTTCCTGCACTTAGGAACCCATCATATTTGGATTCATACCTGGATCCTGCTTTCATGGCTTTAATCAAAGATCCGGATCAAAGACGCAAGGAACAATGGGAAAAAACTGCCCAGGCTCAGACTGGATGGAATTATGGTAGAATACTTGGATTTGGTGAACTTGGTGGAGCTCCTTTATCTGCTGCTGAAGAATACTCACTTCATTCAAGATACCTTGCTAAAGCAAATTCTCTTAATCTCTCTGAAATTGGGGAGATGAAAATTGTTTACCGTGGTGGAGTTGATAGCGAGGGTCGCCCTGTTATGGTCGTTGTGGGAGCACATTTTCTACTGCGTTGTCTCGACCTTGAGCGATTTGTGCTCTATGTTGTAAAGGAATTTGAGCCATTAATTCAGAAGCCTTACACCATTGTGTACTTCCACTCAGCAGCTTCTTTACAGCCTCGGCCCGACATGGGATGGATGAAGAGATTGCAGCAGATTCTTGGCCGAAAACACCAGCGAAACCTCCAGGCAATATACGTTCTTCACCCGACTTTCGGATTGAAAGCTGCAGTATTTGCCATGCAATTGCTCGTGGATAACGCGGTATGGAACAAGGTTGTGTATATCGATCGACTACTACAGCTGTTCAAATATGTTCCACGAGAGCAGTTGACCATCCCGGACTTCGTATTTCAGCACGACTTAGAAGTAAATGGAGGGAAGGGCCTCATTGTGGATCCTCGAACAAAATACGTATATCATCGACCTTAACATCGAAGAAAATGTATGGATAATTATCCATTAGCGTCTCGTATTAGGTGGGTAGGCGTTGGTTATGTTTGTAGAAATGGCATACCATTTTCTTTCATCCTTATTTTTGTTGAAGTATTGGTTCGTTTGCGTAATGAAGATGAAATAACGTTATTCGTTTTGTATATTATGTCGGATAAGCCTTTTTAATAAAATGAAGAAAAGAAAAAGTTGGTTTGATGA

Coding sequence (CDS)

ATGGTTCCTGCACTTAGGAACCCATCATATTTGGATTCATACCTGGATCCTGCTTTCATGGCTTTAATCAAAGATCCGGATCAAAGACGCAAGGAACAATGGGAAAAAACTGCCCAGGCTCAGACTGGATGGAATTATGGTAGAATACTTGGATTTGGTGAACTTGGTGGAGCTCCTTTATCTGCTGCTGAAGAATACTCACTTCATTCAAGATACCTTGCTAAAGCAAATTCTCTTAATCTCTCTGAAATTGGGGAGATGAAAATTGTTTACCGTGGTGGAGTTGATAGCGAGGGTCGCCCTGTTATGGTCGTTGTGGGAGCACATTTTCTACTGCGTTGTCTCGACCTTGAGCGATTTGTGCTCTATGTTGTAAAGGAATTTGAGCCATTAATTCAGAAGCCTTACACCATTGTGTACTTCCACTCAGCAGCTTCTTTACAGCCTCGGCCCGACATGGGATGGATGAAGAGATTGCAGCAGATTCTTGGCCGAAAACACCAGCGAAACCTCCAGGCAATATACGTTCTTCACCCGACTTTCGGATTGAAAGCTGCAGTATTTGCCATGCAATTGCTCGTGGATAACGCGGTATGGAACAAGGTTGTGTATATCGATCGACTACTACAGCTGTTCAAATATGTTCCACGAGAGCAGTTGACCATCCCGGACTTCGTATTTCAGCACGACTTAGAAGTAAATGGAGGGAAGGGCCTCATTGTGGATCCTCGAACAAAATACGTATATCATCGACCTTAA

Protein sequence

MVPALRNPSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGELGGAPLSAAEEYSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKAAVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYHRP

Homology

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BLAST of CmoCh12G006540 vs. ExPASy Swiss-Prot
Match: Q54TH9 (Rho GTPase-activating protein gacY OS=Dictyostelium discoideum OX=44689 GN=gacY PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-29
Identity = 55/161 (34.16%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 69  HSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEF 128
           ++ YL K+ S    EI  +  +Y  G D+ GR ++V++ +H  +R +D+ER +LY +   
Sbjct: 355 YNEYLTKSKSQRFPEIEALNFIYPAGKDNLGRTIIVIIASHLPVREMDMERVLLYTISIM 414

Query: 129 EPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKAAVF 188
           +P++++ Y +VY H+  +   +P M WMK++  I  RK+++NL+ +Y++HPT  +K  + 
Sbjct: 415 DPVVEEEYVLVYVHTNMNNSNKPSMAWMKKVYTIFNRKYKKNLKGLYIVHPTTWIKFTLG 474

Query: 189 AMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQH 230
             +  + +  W K+ YID L +LFK  PREQL +P+ +  H
Sbjct: 475 IFKHFLSSKFWKKLTYIDDLGELFKTFPREQLALPNAIMMH 515

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BLAST of CmoCh12G006540 vs. ExPASy Swiss-Prot
Match: Q5CZL1 (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis OX=8364 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.2e-28
Identity = 64/183 (34.97%), Postives = 110/183 (60.11%), Query Frame = 0


Query: 53  GELGGAPLSAAEEYSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLL 112
           G+L GA +    + + ++R+L++A + +LS+I  +K +Y+ GVD+ GR VMVVVG +  +
Sbjct: 303 GQLSGAAMQKQHQRN-YNRWLSRARTEDLSDIAALKALYQSGVDNCGRTVMVVVGRNIPV 362

Query: 113 RCLDLERFVLYVVKEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQ 172
             +D+E+ +LY +   + +  K Y +VYFH+       PD  ++K +  I+  K+++NL+
Sbjct: 363 LLIDMEKALLYFIHMMDHVAAKEYVLVYFHTLTGEHNHPDSDFLKNMYDIVDVKYKKNLK 422

Query: 173 AIYVLHPTFGLKAAVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLE 232
           A+Y +HPTF  K + +       + + +KV  ++ L QLF  VP EQ+ IP FV  +D  
Sbjct: 423 ALYFVHPTFRSKVSSWFFTTFTVSGLKDKVHQVESLHQLFSAVPPEQIEIPPFVLDYDAR 482

Query: 233 VNG 236
            NG
Sbjct: 483 ENG 484

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BLAST of CmoCh12G006540 vs. ExPASy Swiss-Prot
Match: Q5XGM5 (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.1e-27
Identity = 62/183 (33.88%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 53  GELGGAPLSAAEEYSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLL 112
           G+L GA +    + + ++R+L++A + +LS+I  +K +Y+ GVD+ GR VMVVVG +  +
Sbjct: 303 GQLSGAAMQKQHQRN-YNRWLSRARTEDLSDIAALKALYQSGVDNCGRSVMVVVGRNIPV 362

Query: 113 RCLDLERFVLYVVKEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQ 172
             +D+E+ +LY +   + +  K Y +VYFH+        D  ++K +  I+  K+++NL+
Sbjct: 363 LLIDMEKALLYFIHMMDHVTAKDYVLVYFHTLTGEHNHLDSDFLKNMYDIIDVKYKKNLK 422

Query: 173 AIYVLHPTFGLKAAVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLE 232
           A+Y +HPTF  K + +       + + +KV  ++ L QLF  +P EQ+ IP FV  +D  
Sbjct: 423 ALYFVHPTFRSKVSTWFFTTFTVSGLKDKVHQVESLHQLFTAIPPEQIEIPPFVLDYDAR 482

Query: 233 VNG 236
            NG
Sbjct: 483 ENG 484

[Close]

BLAST of CmoCh12G006540 vs. ExPASy Swiss-Prot
Match: Q2KIX2 (Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus OX=9913 GN=GDAP2 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26
Identity = 63/188 (33.51%), Postives = 112/188 (59.57%), Query Frame = 0


Query: 48  RILGFGELGGAPLSAAEEYSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVG 107
           R++  G+L  A L    + + ++R+L +A S +LS+I  +K +Y+ GVD+ GR VMVVVG
Sbjct: 299 RLILQGQLSEAALQKQHQRN-YNRWLCQARSEDLSDIASLKALYQTGVDNCGRTVMVVVG 358

Query: 108 AHFLLRCLDLERFVLYVVKEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKH 167
            +  +  +D+++ +LY +   + +  K Y +VYFH+  S     D  ++K+L  ++  K+
Sbjct: 359 RNIPVTLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSEYNHLDSDFLKKLYDVVDVKY 418

Query: 168 QRNLQAIYVLHPTFGLKAAVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVF 227
           +RNL+A+Y +HPTF  K + +       + + +K+ ++D L QLF  +  EQ+  P FV 
Sbjct: 419 KRNLKAVYFVHPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVL 478

Query: 228 QHDLEVNG 236
           ++D   NG
Sbjct: 479 EYDARENG 485

[Close]

BLAST of CmoCh12G006540 vs. ExPASy Swiss-Prot
Match: Q66H63 (Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus OX=10116 GN=Gdap2 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-26
Identity = 62/183 (33.88%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 53  GELGGAPLSAAEEYSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLL 112
           G+L  A L    + + ++R+L +A S +LS+I  +K +Y+ GVD+ GR VMVVVG +  +
Sbjct: 304 GQLSEAALQKQHQRN-YNRWLCQARSEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPV 363

Query: 113 RCLDLERFVLYVVKEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQ 172
             +D+++ +LY +   + +  K Y +VYFH+  S     D  ++K+L  ++  K++RNL+
Sbjct: 364 TLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSEYNHLDSDFLKKLYDVVDIKYKRNLK 423

Query: 173 AIYVLHPTFGLKAAVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLE 232
           A+Y +HPTF  K + +       + + +K+ ++D L QLF  +  EQ+  P FV ++D  
Sbjct: 424 AVYFVHPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDAR 483

Query: 233 VNG 236
            NG
Sbjct: 484 ENG 485

[Close]

BLAST of CmoCh12G006540 vs. ExPASy TrEMBL
Match: A0A6J1GJF0 (protein GDAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111454405 PE=3 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.1e-139
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 6   RNPSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGELGGAPLSAAEE 65
           RNPSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGELGGAPLSAAEE
Sbjct: 316 RNPSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGELGGAPLSAAEE 375

Query: 66  YSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV 125
           YSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV
Sbjct: 376 YSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV 435

Query: 126 KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKA 185
           KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKA
Sbjct: 436 KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKA 495

Query: 186 AVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 245
           AVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT
Sbjct: 496 AVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 555

Query: 246 KYVYHRP 253
           KYVYHRP
Sbjct: 556 KYVYHRP 562

[Close]

BLAST of CmoCh12G006540 vs. ExPASy TrEMBL
Match: A0A6J1KPN2 (protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496470 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 5.3e-139
Identity = 245/247 (99.19%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 6   RNPSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGELGGAPLSAAEE 65
           RNPSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGELGGAPLSAAEE
Sbjct: 316 RNPSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGELGGAPLSAAEE 375

Query: 66  YSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV 125
           YSLHSRYLAK+NSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV
Sbjct: 376 YSLHSRYLAKSNSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV 435

Query: 126 KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKA 185
           KEFEPLIQ+PYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKA
Sbjct: 436 KEFEPLIQRPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKA 495

Query: 186 AVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 245
           AVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT
Sbjct: 496 AVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 555

Query: 246 KYVYHRP 253
           KYVYHRP
Sbjct: 556 KYVYHRP 562

[Close]

BLAST of CmoCh12G006540 vs. ExPASy TrEMBL
Match: A0A0A0KS03 (Macro domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487740 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.1e-135
Identity = 240/247 (97.17%), Postives = 241/247 (97.57%), Query Frame = 0


Query: 6   RNPSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGELGGAPLSAAEE 65
           RN SYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFG+LGG PLSAAEE
Sbjct: 313 RNSSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGDLGGPPLSAAEE 372

Query: 66  YSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV 125
           YSLHSRYLAKANSLNLSEI EMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV
Sbjct: 373 YSLHSRYLAKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV 432

Query: 126 KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKA 185
           KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNL AIYVLHPTFGLKA
Sbjct: 433 KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKA 492

Query: 186 AVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 245
           AV AMQLLVDN VWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT
Sbjct: 493 AVLAMQLLVDNVVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 552

Query: 246 KYVYHRP 253
           KYVYHRP
Sbjct: 553 KYVYHRP 559

[Close]

BLAST of CmoCh12G006540 vs. ExPASy TrEMBL
Match: A0A1S4E5F4 (protein GDAP2 homolog OS=Cucumis melo OX=3656 GN=LOC103503322 PE=3 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 4.7e-135
Identity = 239/247 (96.76%), Postives = 241/247 (97.57%), Query Frame = 0


Query: 6   RNPSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGELGGAPLSAAEE 65
           RN SYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGR+LGFG+LGG PLSAAEE
Sbjct: 313 RNSSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRMLGFGDLGGPPLSAAEE 372

Query: 66  YSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV 125
           YSLHSRYLAKANSLNLSEI EMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV
Sbjct: 373 YSLHSRYLAKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV 432

Query: 126 KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKA 185
           KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNL AIYVLHPTFGLKA
Sbjct: 433 KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKA 492

Query: 186 AVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 245
           AV AMQLLVDN VWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT
Sbjct: 493 AVLAMQLLVDNVVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 552

Query: 246 KYVYHRP 253
           KYVYHRP
Sbjct: 553 KYVYHRP 559

[Close]

BLAST of CmoCh12G006540 vs. ExPASy TrEMBL
Match: A0A6J1G3J6 (protein GDAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450452 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 6.7e-134
Identity = 236/247 (95.55%), Postives = 241/247 (97.57%), Query Frame = 0


Query: 6   RNPSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGELGGAPLSAAEE 65
           RN SYLD+YLDPAFMALIKDPDQRRKEQWEKTAQAQTGW+YGR+LGFG+LGG PLSAAEE
Sbjct: 314 RNSSYLDAYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWSYGRMLGFGDLGGPPLSAAEE 373

Query: 66  YSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV 125
           YSLHSRYLAKANSLNLSEI EMKIVYRGGVDS+G PVMVVVGAHFLLRCLDLERFVLYVV
Sbjct: 374 YSLHSRYLAKANSLNLSEIAEMKIVYRGGVDSDGHPVMVVVGAHFLLRCLDLERFVLYVV 433

Query: 126 KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKA 185
           KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNL AIYVLHPTFGLKA
Sbjct: 434 KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKA 493

Query: 186 AVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 245
           AVFAMQLLVDN VWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT
Sbjct: 494 AVFAMQLLVDNVVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 553

Query: 246 KYVYHRP 253
           KYVYHRP
Sbjct: 554 KYVYHRP 560

[Close]

BLAST of CmoCh12G006540 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein )

HSP 1 Score: 444.5 bits (1142), Expect = 5.7e-125
Identity = 212/247 (85.83%), Postives = 231/247 (93.52%), Query Frame = 0


Query: 6   RNPSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGELGGAPLSAAEE 65
           RN ++LDSYLDPAFM+LIKDPD+RRKEQWEKTAQAQ+G+N+ ++LGFG+LGG PLSAAEE
Sbjct: 316 RNSNHLDSYLDPAFMSLIKDPDERRKEQWEKTAQAQSGFNFVKLLGFGDLGGPPLSAAEE 375

Query: 66  YSLHSRYLAKANSLNLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVV 125
           YSLHSRYLAKANS+NLSEI EMKIVYRGGVD+EG PVMVVVGAHFLLRCLDLERFVLYV+
Sbjct: 376 YSLHSRYLAKANSINLSEIAEMKIVYRGGVDTEGHPVMVVVGAHFLLRCLDLERFVLYVI 435

Query: 126 KEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKA 185
           KEFEP+IQKPY+IVYFHSAASLQ +PD+GWMKRL+QILGRKHQRNLQAIYVLHPTF LKA
Sbjct: 436 KEFEPVIQKPYSIVYFHSAASLQVQPDLGWMKRLEQILGRKHQRNLQAIYVLHPTFHLKA 495

Query: 186 AVFAMQLLVDNAVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 245
            +  MQ  VDN VW KVVY DRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT
Sbjct: 496 TILTMQFFVDNVVWKKVVYADRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRT 555

Query: 246 KYVYHRP 253
           KYVY RP
Sbjct: 556 KYVYQRP 562

[Close]

BLAST of CmoCh12G006540 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 68.9 bits (167), Expect = 6.5e-12
Identity = 42/152 (27.63%), Postives = 81/152 (53.29%), Query Frame = 0


Query: 84  IGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEP-LIQKPYTIVYFH 143
           I +++I    G D  GR ++ ++G  F  R L L+    Y+ ++  P L +KP+ ++Y H
Sbjct: 14  IEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRLGRKPFAVLYVH 73

Query: 144 SAASLQPR-PDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKAAVFAM---QLLVDNAV 203
           +        P +  ++ +   +    + NLQ +Y LHP  GL++ +F     + L    +
Sbjct: 74  TGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHP--GLQSRLFLATCGRFLFSGGL 133

Query: 204 WNKVVYIDRLLQLFKYVPREQLTIPDFVFQHD 231
           + K+ YI R+  L+++V R ++ +P+FV+ HD
Sbjct: 134 YGKLRYISRVDYLWEHVRRNEIEMPEFVYDHD 163

[Close]

BLAST of CmoCh12G006540 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-09
Identity = 37/154 (24.03%), Postives = 75/154 (48.70%), Query Frame = 0


Query: 80  NLSEIGEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEF-EPLIQKPYTI 139
           + S++  ++     G+D  G  +  +VG +F  R +  ER   Y+ ++      + P  +
Sbjct: 45  DFSDLDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCL 104

Query: 140 VYFHSAASLQPR-PDMGWMKRLQQILGRKHQRNLQAIYVLHPTFGLKAAVFAM-QLLVDN 199
           VY HS        P +  ++ + + L    +  LQ +Y +HP    +  +  + +LL+  
Sbjct: 105 VYMHSTVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSG 164

Query: 200 AVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHD 231
            ++ K+ Y+ RL  L++ + + ++ IPDFV  HD
Sbjct: 165 GLYWKIKYVSRLQYLWEDIKKGEVEIPDFVKNHD 198

The following BLAST results are available for this feature:

BLAST of CmoCh12G006540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54TH9	1.9e-29	34.16	Rho GTPase-activating protein gacY OS=Dictyostelium discoideum OX=44689 GN=gacY ...	[more]
Q5CZL1	8.2e-28	34.97	Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis O...	[more]
Q5XGM5	9.1e-27	33.88	Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis OX=83...	[more]
Q2KIX2	1.2e-26	33.51	Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus OX=9913 G...	[more]
Q66H63	2.0e-26	33.88	Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus OX...	[more]

BLAST of CmoCh12G006540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJF0	1.1e-139	100.00	protein GDAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111454405 PE=3 SV=1	[more]
A0A6J1KPN2	5.3e-139	99.19	protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496470 PE=3 SV=1	[more]
A0A0A0KS03	2.1e-135	97.17	Macro domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487740 PE=3 ...	[more]
A0A1S4E5F4	4.7e-135	96.76	protein GDAP2 homolog OS=Cucumis melo OX=3656 GN=LOC103503322 PE=3 SV=1	[more]
A0A6J1G3J6	6.7e-134	95.55	protein GDAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450452 PE=3 SV=1	[more]

BLAST of CmoCh12G006540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69340.1	5.7e-125	85.83	appr-1-p processing enzyme family protein	[more]
AT4G35750.1	6.5e-12	27.63	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT3G10210.1	3.0e-09	24.03	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001251	CRAL-TRIO lipid binding domain	SMART	SM00516	sec14_4	coord: 83..229 e-value: 4.1E-9 score: 46.3
IPR001251	CRAL-TRIO lipid binding domain	PFAM	PF13716	CRAL_TRIO_2	coord: 99..230 e-value: 8.3E-31 score: 107.1
IPR001251	CRAL-TRIO lipid binding domain	CDD	cd00170	SEC14	coord: 87..223 e-value: 1.73936E-24 score: 93.6038
IPR036865	CRAL-TRIO lipid binding domain superfamily	GENE3D	3.40.525.10		coord: 83..234 e-value: 2.4E-45 score: 155.9
IPR036865	CRAL-TRIO lipid binding domain superfamily	SUPERFAMILY	52087	CRAL/TRIO domain	coord: 82..220
None	No IPR available	PANTHER	PTHR11106	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	coord: 6..233
None	No IPR available	PANTHER	PTHR11106:SF109	APPR-1-P PROCESSING ENZYME FAMILY PROTEIN	coord: 6..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G006540.1	CmoCh12G006540.1	mRNA