CmoCh12G003940 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G003940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	bZIP transcription factor 44-like
Location	Cmo_Chr12: 2443942 .. 2444430 (-)
RNA-Seq Expression	CmoCh12G003940
Synteny	CmoCh12G003940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCGAGCGGAAATTCCTCTGGTTCCACTAGGCTTCTAAACTCAGGCTCTGAAGAGGATTTGCAGATTCTGATGGATCAGAGGAAACGGAAAAGAATGCAATCGAATCGTGAATCAGCGAGGCGATCTCGAATGCGGAAGCAACAGCATCTGGACGAATTGATGGCGCAAGTGGCTCGATTACGGAAGGATAACGCTCAGATTCTCTCGAATATCAACATTACATCGCAGCTTTATATGAATGTCGAGGCAGAGAACTCGATTCTGAGAGCTCAAATGGAGGAACTGACGCAGAGATTGCAATCGCTCGAGGAGATCTCTAATTGCATCGACATCGGCGGCAACAATGGCGGATTTGGAGAAGCGGAGGAGGAAGCATTTCAGATTCAGACTAATGCGGCCACCGATAGCTTCATGAACTCGATGAATTTTCTGTATGTCAACCAGCCGATCATGGCCACTGCTGATATCTTCCATTATTGA

mRNA sequence

ATGGCTTCTTCGAGCGGAAATTCCTCTGGTTCCACTAGGCTTCTAAACTCAGGCTCTGAAGAGGATTTGCAGATTCTGATGGATCAGAGGAAACGGAAAAGAATGCAATCGAATCGTGAATCAGCGAGGCGATCTCGAATGCGGAAGCAACAGCATCTGGACGAATTGATGGCGCAAGTGGCTCGATTACGGAAGGATAACGCTCAGATTCTCTCGAATATCAACATTACATCGCAGCTTTATATGAATGTCGAGGCAGAGAACTCGATTCTGAGAGCTCAAATGGAGGAACTGACGCAGAGATTGCAATCGCTCGAGGAGATCTCTAATTGCATCGACATCGGCGGCAACAATGGCGGATTTGGAGAAGCGGAGGAGGAAGCATTTCAGATTCAGACTAATGCGGCCACCGATAGCTTCATGAACTCGATGAATTTTCTGTATGTCAACCAGCCGATCATGGCCACTGCTGATATCTTCCATTATTGA

Coding sequence (CDS)

ATGGCTTCTTCGAGCGGAAATTCCTCTGGTTCCACTAGGCTTCTAAACTCAGGCTCTGAAGAGGATTTGCAGATTCTGATGGATCAGAGGAAACGGAAAAGAATGCAATCGAATCGTGAATCAGCGAGGCGATCTCGAATGCGGAAGCAACAGCATCTGGACGAATTGATGGCGCAAGTGGCTCGATTACGGAAGGATAACGCTCAGATTCTCTCGAATATCAACATTACATCGCAGCTTTATATGAATGTCGAGGCAGAGAACTCGATTCTGAGAGCTCAAATGGAGGAACTGACGCAGAGATTGCAATCGCTCGAGGAGATCTCTAATTGCATCGACATCGGCGGCAACAATGGCGGATTTGGAGAAGCGGAGGAGGAAGCATTTCAGATTCAGACTAATGCGGCCACCGATAGCTTCATGAACTCGATGAATTTTCTGTATGTCAACCAGCCGATCATGGCCACTGCTGATATCTTCCATTATTGA

Protein sequence

MASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQVARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDIGGNNGGFGEAEEEAFQIQTNAATDSFMNSMNFLYVNQPIMATADIFHY

Homology

[Close]

BLAST of CmoCh12G003940 vs. ExPASy Swiss-Prot
Match: C0Z2L5 (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-29
Identity = 90/168 (53.57%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 2   ASSSGNSS--GSTRLLNSGSEEDL--QILMDQRKRKRMQSNRESARRSRMRKQQHLDELM 61
           +S+SGN S   +T L NSGSE DL  + L+D+RKRKR QSNRESARRSRMRKQ+HLD+L 
Sbjct: 9   SSTSGNCSSVSTTGLANSGSESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLT 68

Query: 62  AQVARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDIGGN 121
           AQV  LRK+NAQI++ I +T+Q Y+ +EAEN ILRAQ+ EL  RLQSL EI + ++   +
Sbjct: 69  AQVTHLRKENAQIVAGIAVTTQHYVTIEAENDILRAQVLELNHRLQSLNEIVDFVE--SS 128

Query: 122 NGGFGEAEEEAFQIQTNAATDSFMNSMNFLYVNQPIMATA----DIFH 162
           + GFG   E    +      D  MN MN  + NQPIMA+A    D+F+
Sbjct: 129 SSGFG--METGQGLFDGGLFDGVMNPMNLGFYNQPIMASASTAGDVFN 172

[Close]

BLAST of CmoCh12G003940 vs. ExPASy Swiss-Prot
Match: O65683 (bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.3e-28
Identity = 82/165 (49.70%), Postives = 112/165 (67.88%), Query Frame = 0


Query: 1   MASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60
           M SSS  ++ ST   +SGSEE    LM+QRKRKRM SNRESARRSRM+KQ+ LD+L AQV
Sbjct: 1   MESSSSGTTSSTIQTSSGSEES---LMEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQV 60

Query: 61  ARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDI--GGNN 120
             L+K+N +I+++++IT+Q Y+ VEAENS+LRAQ++EL  RLQSL +I   +D     NN
Sbjct: 61  NHLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLDSSNNNNN 120

Query: 121 GGFGEAEEEAFQIQTNAATDSFMNSMNFLYV-NQPIMATADIFHY 163
              G        ++ +   D F+N MN  Y+ NQP+MA++D   Y
Sbjct: 121 NNMGMCSNPLVGLECD---DFFVNQMNMSYIMNQPLMASSDALMY 159

[Close]

BLAST of CmoCh12G003940 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-25
Identity = 76/164 (46.34%), Postives = 104/164 (63.41%), Query Frame = 0


Query: 2   ASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQVA 61
           +SSS   S S+    + +  D  + +D+RKRKRM SNRESARRSRMRKQ+H+D+L AQ+ 
Sbjct: 3   SSSSTYRSSSSSDGGNNNPSDSVVTVDERKRKRMLSNRESARRSRMRKQKHVDDLTAQIN 62

Query: 62  RLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDIGGNNGGF 121
           +L  DN QIL+++ +TSQLYM ++AENS+L AQMEEL+ RLQSL EI + +   G   G 
Sbjct: 63  QLSNDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNGAGFGV 122

Query: 122 GEAEEEAFQIQTNAATDSFMNSMNFL----------YVNQPIMA 156
            + +   F  +T    D + + MN +          Y NQPIMA
Sbjct: 123 DQIDGCGFDDRT-VGIDGYYDDMNMMSNVNHWGGSVYTNQPIMA 165

[Close]

BLAST of CmoCh12G003940 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-15
Identity = 56/133 (42.11%), Postives = 80/133 (60.15%), Query Frame = 0


Query: 28  DQRKRKRMQSNRESARRSRMRKQQHLDELMAQVARLRKDNAQILSNINITSQLYMNVEAE 87
           D+RKRKRM SNRESARRSRMRKQ+ L +L+ +V  L+ DNA+I   ++  S+ Y+ +E++
Sbjct: 23  DERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKNDNAKITEQVDEASKKYIEMESK 82

Query: 88  NSILRAQMEELTQRLQSLEEISNCIDIGGNNGGFGEAEEEAFQIQTNAATDSFMNSMNFL 147
           N++LRAQ  ELT RL+SL  +   ++         E   +A  I      +S  N     
Sbjct: 83  NNVLRAQASELTDRLRSLNSVLEMVE---------EISGQALDIP--EIPESMQNPWQMP 142

Query: 148 YVNQPIMATADIF 161
              QPI A+AD+F
Sbjct: 143 CPMQPIRASADMF 144

[Close]

BLAST of CmoCh12G003940 vs. ExPASy Swiss-Prot
Match: P24068 (Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 8.2e-13
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 5   SGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQVARLR 64
           S +S   T    SGS+ D       R+ KR  SNRESARRSR+RKQQHLDEL+ +VARL+
Sbjct: 2   SSSSLSPTAGRTSGSDGD-SAADTHRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQ 61

Query: 65  KDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCID 114
            DNA++ +     +  Y  VE EN++LRA+  EL  RL+S+ E+   ++
Sbjct: 62  ADNARVAARARDIASQYTRVEQENTVLRARAAELGDRLRSVNEVLRLVE 109

[Close]

BLAST of CmoCh12G003940 vs. ExPASy TrEMBL
Match: A0A6J1GJ02 (bZIP transcription factor 44-like OS=Cucurbita moschata OX=3662 GN=LOC111454700 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 8.3e-77
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60
           MASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV
Sbjct: 1   MASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60

Query: 61  ARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDIGGNNGG 120
           ARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDIGGNNGG
Sbjct: 61  ARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDIGGNNGG 120

Query: 121 FGEAEEEAFQIQTNAATDSFMNSMNFLYVNQPIMATADIFHY 163
           FGEAEEEAFQIQTNAATDSFMNSMNFLYVNQPIMATADIFHY
Sbjct: 121 FGEAEEEAFQIQTNAATDSFMNSMNFLYVNQPIMATADIFHY 162

[Close]

BLAST of CmoCh12G003940 vs. ExPASy TrEMBL
Match: A0A6J1KP74 (bZIP transcription factor 44-like OS=Cucurbita maxima OX=3661 GN=LOC111496343 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.0e-76
Identity = 159/162 (98.15%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60
           M SSSGNSSGSTRLLNSGSEEDLQ+LMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV
Sbjct: 1   MDSSSGNSSGSTRLLNSGSEEDLQVLMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60

Query: 61  ARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDIGGNNGG 120
           ARLRKDNAQILSNINITSQLYMNVEAENS+LRAQMEELTQRLQSLEEISNCIDIGGNNGG
Sbjct: 61  ARLRKDNAQILSNINITSQLYMNVEAENSVLRAQMEELTQRLQSLEEISNCIDIGGNNGG 120

Query: 121 FGEAEEEAFQIQTNAATDSFMNSMNFLYVNQPIMATADIFHY 163
           FGEAEEEAFQIQTNAATDSFMNSMNFLYVNQPIMATADIFHY
Sbjct: 121 FGEAEEEAFQIQTNAATDSFMNSMNFLYVNQPIMATADIFHY 162

[Close]

BLAST of CmoCh12G003940 vs. ExPASy TrEMBL
Match: A0A6J1KDL7 (bZIP transcription factor 44-like OS=Cucurbita maxima OX=3661 GN=LOC111492296 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.3e-65
Identity = 140/162 (86.42%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60
           MAS+SGNSSGSTRL NSGSEEDLQ+LMD RKRKRMQSNRESARRSRMRKQQHLDELMAQV
Sbjct: 1   MASASGNSSGSTRLQNSGSEEDLQVLMDLRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60

Query: 61  ARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDIGGNNGG 120
           A+LRKDNAQILSNIN+TSQLY NV+AENS+LRAQM ELTQRLQSLEEI+N I+ GG+NGG
Sbjct: 61  AQLRKDNAQILSNINVTSQLYTNVDAENSVLRAQMAELTQRLQSLEEIANFINTGGSNGG 120

Query: 121 FGEAEEEAFQIQTNAATDSFMNSMNFLYVNQPIMATADIFHY 163
           FGE EEEAFQIQTN A DSFM+ MNF YVNQPIMA ADIFHY
Sbjct: 121 FGETEEEAFQIQTNVAADSFMSPMNFQYVNQPIMAAADIFHY 162

[Close]

BLAST of CmoCh12G003940 vs. ExPASy TrEMBL
Match: A0A6J1HBS4 (bZIP transcription factor 44-like OS=Cucurbita moschata OX=3662 GN=LOC111462572 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.8e-64
Identity = 139/162 (85.80%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60
           MAS+SGNSSGSTRL NSGSEEDLQ+LMD RKRKRMQSNRESARRSRMRKQQHLDELMAQV
Sbjct: 1   MASASGNSSGSTRLQNSGSEEDLQVLMDLRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60

Query: 61  ARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDIGGNNGG 120
            +LRKDNAQILSNIN TSQLYMNV+AENS+LRAQM ELTQRLQSLEEI+N I+ GG+NGG
Sbjct: 61  TQLRKDNAQILSNINTTSQLYMNVDAENSVLRAQMAELTQRLQSLEEIANFINTGGSNGG 120

Query: 121 FGEAEEEAFQIQTNAATDSFMNSMNFLYVNQPIMATADIFHY 163
           FGE EEEAFQIQTN A +SFM+ MNF YVNQPIMA ADIFHY
Sbjct: 121 FGETEEEAFQIQTNVAANSFMSPMNFQYVNQPIMAAADIFHY 162

[Close]

BLAST of CmoCh12G003940 vs. ExPASy TrEMBL
Match: A0A5A7VIB6 (BZIP transcription factor 53 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005460 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.3e-63
Identity = 143/166 (86.14%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 1   MASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60
           M S+SGNSSGS RL NSGSEEDLQ+LMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV
Sbjct: 1   MDSASGNSSGSIRLQNSGSEEDLQVLMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60

Query: 61  ARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDI--GGNN 120
            +L+KDNAQILSNINITSQLYMNVEAENSIL+AQM ELTQRLQSLEEI+NCI+   G NN
Sbjct: 61  TQLKKDNAQILSNINITSQLYMNVEAENSILKAQMAELTQRLQSLEEIANCINNTGGNNN 120

Query: 121 GGFGEA--EEEAFQIQTNAATDSFMNSMNFLYVNQPIMATADIFHY 163
           GGFGE   EEEAFQIQT  A DSFMNSMNFLYVNQPIMA ADIFHY
Sbjct: 121 GGFGETEEEEEAFQIQTIVAADSFMNSMNFLYVNQPIMAAADIFHY 166

[Close]

BLAST of CmoCh12G003940 vs. TAIR 10
Match: AT1G75390.1 (basic leucine-zipper 44 )

HSP 1 Score: 131.0 bits (328), Expect = 8.9e-31
Identity = 90/168 (53.57%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 2   ASSSGNSS--GSTRLLNSGSEEDL--QILMDQRKRKRMQSNRESARRSRMRKQQHLDELM 61
           +S+SGN S   +T L NSGSE DL  + L+D+RKRKR QSNRESARRSRMRKQ+HLD+L 
Sbjct: 9   SSTSGNCSSVSTTGLANSGSESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLT 68

Query: 62  AQVARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDIGGN 121
           AQV  LRK+NAQI++ I +T+Q Y+ +EAEN ILRAQ+ EL  RLQSL EI + ++   +
Sbjct: 69  AQVTHLRKENAQIVAGIAVTTQHYVTIEAENDILRAQVLELNHRLQSLNEIVDFVE--SS 128

Query: 122 NGGFGEAEEEAFQIQTNAATDSFMNSMNFLYVNQPIMATA----DIFH 162
           + GFG   E    +      D  MN MN  + NQPIMA+A    D+F+
Sbjct: 129 SSGFG--METGQGLFDGGLFDGVMNPMNLGFYNQPIMASASTAGDVFN 172

[Close]

BLAST of CmoCh12G003940 vs. TAIR 10
Match: AT4G34590.1 (G-box binding factor 6 )

HSP 1 Score: 125.6 bits (314), Expect = 3.7e-29
Identity = 82/165 (49.70%), Postives = 112/165 (67.88%), Query Frame = 0


Query: 1   MASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQV 60
           M SSS  ++ ST   +SGSEE    LM+QRKRKRM SNRESARRSRM+KQ+ LD+L AQV
Sbjct: 1   MESSSSGTTSSTIQTSSGSEES---LMEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQV 60

Query: 61  ARLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDI--GGNN 120
             L+K+N +I+++++IT+Q Y+ VEAENS+LRAQ++EL  RLQSL +I   +D     NN
Sbjct: 61  NHLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLDSSNNNNN 120

Query: 121 GGFGEAEEEAFQIQTNAATDSFMNSMNFLYV-NQPIMATADIFHY 163
              G        ++ +   D F+N MN  Y+ NQP+MA++D   Y
Sbjct: 121 NNMGMCSNPLVGLECD---DFFVNQMNMSYIMNQPLMASSDALMY 159

[Close]

BLAST of CmoCh12G003940 vs. TAIR 10
Match: AT2G18160.1 (basic leucine-zipper 2 )

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-26
Identity = 76/164 (46.34%), Postives = 104/164 (63.41%), Query Frame = 0


Query: 2   ASSSGNSSGSTRLLNSGSEEDLQILMDQRKRKRMQSNRESARRSRMRKQQHLDELMAQVA 61
           +SSS   S S+    + +  D  + +D+RKRKRM SNRESARRSRMRKQ+H+D+L AQ+ 
Sbjct: 3   SSSSTYRSSSSSDGGNNNPSDSVVTVDERKRKRMLSNRESARRSRMRKQKHVDDLTAQIN 62

Query: 62  RLRKDNAQILSNINITSQLYMNVEAENSILRAQMEELTQRLQSLEEISNCIDIGGNNGGF 121
           +L  DN QIL+++ +TSQLYM ++AENS+L AQMEEL+ RLQSL EI + +   G   G 
Sbjct: 63  QLSNDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNGAGFGV 122

Query: 122 GEAEEEAFQIQTNAATDSFMNSMNFL----------YVNQPIMA 156
            + +   F  +T    D + + MN +          Y NQPIMA
Sbjct: 123 DQIDGCGFDDRT-VGIDGYYDDMNMMSNVNHWGGSVYTNQPIMA 165

[Close]

BLAST of CmoCh12G003940 vs. TAIR 10
Match: AT1G75390.2 (basic leucine-zipper 44 )

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 63/97 (64.95%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 2   ASSSGNSS--GSTRLLNSGSEEDL--QILMDQRKRKRMQSNRESARRSRMRKQQHLDELM 61
           +S+SGN S   +T L NSGSE DL  + L+D+RKRKR QSNRESARRSRMRKQ+HLD+L 
Sbjct: 9   SSTSGNCSSVSTTGLANSGSESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLT 68

Query: 62  AQVARLRKDNAQILSNINITSQLYMNVEAENSILRAQ 95
           AQV  LRK+NAQI++ I +T+Q Y+ +EAEN ILRAQ
Sbjct: 69  AQVTHLRKENAQIVAGIAVTTQHYVTIEAENDILRAQ 105

[Close]

BLAST of CmoCh12G003940 vs. TAIR 10
Match: AT3G62420.1 (basic region/leucine zipper motif 53 )

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-16
Identity = 56/133 (42.11%), Postives = 80/133 (60.15%), Query Frame = 0


Query: 28  DQRKRKRMQSNRESARRSRMRKQQHLDELMAQVARLRKDNAQILSNINITSQLYMNVEAE 87
           D+RKRKRM SNRESARRSRMRKQ+ L +L+ +V  L+ DNA+I   ++  S+ Y+ +E++
Sbjct: 23  DERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKNDNAKITEQVDEASKKYIEMESK 82

Query: 88  NSILRAQMEELTQRLQSLEEISNCIDIGGNNGGFGEAEEEAFQIQTNAATDSFMNSMNFL 147
           N++LRAQ  ELT RL+SL  +   ++         E   +A  I      +S  N     
Sbjct: 83  NNVLRAQASELTDRLRSLNSVLEMVE---------EISGQALDIP--EIPESMQNPWQMP 142

Query: 148 YVNQPIMATADIF 161
              QPI A+AD+F
Sbjct: 143 CPMQPIRASADMF 144

The following BLAST results are available for this feature:

BLAST of CmoCh12G003940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0Z2L5	1.3e-29	53.57	bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1	[more]
O65683	5.3e-28	49.70	bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1	[more]
Q9SI15	1.9e-25	46.34	bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1	[more]
Q9LZP8	2.3e-15	42.11	bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1	[more]
P24068	8.2e-13	45.87	Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2	[more]

BLAST of CmoCh12G003940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJ02	8.3e-77	100.00	bZIP transcription factor 44-like OS=Cucurbita moschata OX=3662 GN=LOC111454700 ...	[more]
A0A6J1KP74	7.0e-76	98.15	bZIP transcription factor 44-like OS=Cucurbita maxima OX=3661 GN=LOC111496343 PE...	[more]
A0A6J1KDL7	4.3e-65	86.42	bZIP transcription factor 44-like OS=Cucurbita maxima OX=3661 GN=LOC111492296 PE...	[more]
A0A6J1HBS4	2.8e-64	85.80	bZIP transcription factor 44-like OS=Cucurbita moschata OX=3662 GN=LOC111462572 ...	[more]
A0A5A7VIB6	2.3e-63	86.14	BZIP transcription factor 53 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of CmoCh12G003940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75390.1	8.9e-31	53.57	basic leucine-zipper 44	[more]
AT4G34590.1	3.7e-29	49.70	G-box binding factor 6	[more]
AT2G18160.1	1.3e-26	46.34	basic leucine-zipper 2	[more]
AT1G75390.2	1.7e-21	64.95	basic leucine-zipper 44	[more]
AT3G62420.1	1.6e-16	42.11	basic region/leucine zipper motif 53	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 81..108
None	No IPR available	COILS	Coil	Coil	coord: 46..73
None	No IPR available	GENE3D	1.20.5.170		coord: 28..84 e-value: 3.7E-11 score: 44.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR45764:SF38	BZIP TRANSCRIPTION FACTOR	coord: 1..160
None	No IPR available	PANTHER	PTHR45764	BZIP TRANSCRIPTION FACTOR 44	coord: 1..160
None	No IPR available	CDD	cd14702	bZIP_plant_GBF1	coord: 31..82 e-value: 1.45722E-19 score: 75.2629
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 30..82
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 26..90 e-value: 8.1E-18 score: 75.2
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 30..81 e-value: 1.2E-9 score: 38.2
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 33..48
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 28..75 score: 10.507265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G003940.1	CmoCh12G003940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding