CmoCh12G003740 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G003740
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionV-type proton ATPase proteolipid subunit
LocationCmo_Chr12: 2318825 .. 2321667 (+)
RNA-Seq ExpressionCmoCh12G003740
SyntenyCmoCh12G003740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATCTATCTGCTTATGCGACTTGGAGAAAAAACAAATGCAATGTTCGGACCGACACGACTGTAAGTAGTGAATATTTCCTTCCCCTTTCTTTCTCTTGCAATTTTATTGTCAGCTCACTTTACAGTTTACAATTTTTTTGTGTTGCTATGTTTGCAGATTGTAGGTTGCTTCTCTCATCCCCATAAATAGGTATCTTTCTTTTAGCCTAATGATAGATCCTCAACTTATTGTAGCTGTTGCATATATGTATATAGATTTTGTAATGTCATGGATAGAAGTATGATCTAAAGTAAGCATGTGACCTCGGTATGTGATTCGTGATCGAGGCCAATATCCATTATGAAATCATGCATTTAGGATCGTGGGCATGTTCCAATCGTGTTATTCCAATAAATTGAAGGTTTGAAGTCCCGTCCTAGTCTTTTATAACGTGTCACAACTCGAAAGAAGAAAACGACAAGAAAGAAACACGTGCTTTTGTATTTCTTACTCTTCTTCAGATTCAGTGTTTATGCAACTGATCCATCAATTTGCAGTTCTTTAGTTCTTATTCTCAGTGCAACAATCCTTCTGGTGTTTGGTGAGTAGCAGGAAAGTTGAATTTAATACCCATCTGATGGTCTGTTTTTATGATGCTTCATTCTTTGTGAATCTTTTGTTAGCAGAAGAACATAACTTCGATCTCGTCACTTGTGAATGGTAGCTCGATGCGATCGAATTGACCGACTCGGTGACTGGTTCTTCCTAGTTTTTGCTTCACTTTATTGCCTGTCGTGCTAGTATCCTTTTAAAAATGATGCGGTCTTTTCCGGTATTCAATTATTTATAAAGGCTAAATTATTATAGGAACGAAGCGAATGGTGCTCGGATGCTCAAATAGTACTAGAAATTCTCCGTAGCTCGAAACTTAATTGCTCAGATAGTATTAGAAATTCTTCGTAGCTCTAAACTTAGTATAAGGTCGGGACGTTTAAAGGAATCCCATGGTCGTATAAAGTTCAATAGCTTCTATTATTTGTAACTTTTTGAAAACATTTGAACATATTGTAAAAGTTCTGTTTATAAAGTTTGAATGATTATTTTGAAAATAATATTAAATGACGATATGATTGAGTTGCATTACGTTCAGGCACGCTGGCAAGATTGGGCCTATTGTTGGCCCATTATTTACATCTTATTCTGCTCGCGGCCCAATTATGTTCCTTGATTGGGCCTTCATATGGCCCAGTGGGAAGCCCAGCTGTAGGACCCGATTGTGTTATTCGTAGGCATATAATAATAGTAGTAATAAATAATAATGTAAATTCGTGATAGCGTGAGTATTTCAGAGGGCTGGGGAGAGAGAGATCTGATCCAGTCGGAGAACTTCTTCATCTTCACCGTCGAACACAGAAAAGATGTCGTCAACCTTCAGCGGCGATGAAACGGCGCCCTTCTTCGGCTTCCTCGGCGCTGCTGCGGCCCTCGTCTTCTCCTGTGAGTTATCGTTTGTTCAATGCGGTTAATTTGAGTTTTCTGGGTGTGGATCTTTGATTTGTATGGCGATGGTGTTTCTTGTTGTTTTTGAATCGATTAGGTATGGGAGCTGCTTACGGAACGGCGAAGAGTGGGGTGGGAGTTGCGTCGATGGGAGTAATGAGGCCTGAGTTGGTTATGAAGTCGATTGTGCCGGTGGTTATGGCTGGAGTTTTGGGTATTTATGGGCTTATTATTGCTGTGATTATCAGTACGGGGATTAACCCTAAGGCCAAATCTTATTACCTCTTCGATGGCTACGCGCATCTTTCCTCTGGGCTTGCTTGTGGCCTTGCTGGTCTATCTGCTGGCATGGCTATTGGGATCGTCGGCGATGCTGGTGTTAGGTACTATTTGTTAACGTTTTGGGATGTTTTATTGTCGTCGTGCATCCATTTTTCCCGTCTGTTCACTGTTTTTCACTGATTATCGCTTGATTCGTACATTTTTCCCGTCTTAGTGTTAGTACATTATGTTCTGGTGGATTATGGTCTGTATGTTTGGTGCGATTAGGTTGTTGTAATTTGCGTAAGCTCTGCCAATCAAATAAATTGTTTCTGGTTGTAGTGCGATAATCTTCGCATGGTTGAGTCTGTTTGTTAATTGCCCATTTTATCGAGTTCCTGCGTTTTTTTCTGGGTTTCTAGGAGCTGTGCACGGATATTTACATGTATTTTTTATTTTCAGATATTCTATTCTGGTCTTGTCATTTGGAGATTAGCATAAGAACTCGTTTTGGTCTATGAAGTTAATTTTTGTTATGTATTTGGCCAGAGTCTAAGTGGCATCTATTTGACTTGTATTTTGAAACTTATGCTTAAGCTTTTATATTGGGTGTGGAAATGTGTTGCTGAAGACTTATGTTCAAACGTATTGCACAAATGAATTTGTATGAGACTCAGAATCAGAACCCTTTTGTATCATGAGTAGAACAAATTAAGTGTGAGTTCATAATAGTTTGCAACATGTAGCTTGCCGGTATTTGTCTGTATTTTGTTTTCTCGAACCCTTTCGATGTAAAATGCACTTGTCACTTATACTTGTCCTCTACAGAGCCAATGCACAGCAGCCTAAGCTTTTCGTTGGGATGATTCTTATTCTAATTTTTGCCGAAGCTCTGGCTCTCTACGGACTTATTGTTGGCATTATTCTCTCTTCCCGAGCTGGTCAGTCGAGAGCTGATTAATTGGATGCTTTGTGCGTGGACTGGAGTTTGTGTAGTATGTCTCCTCTTTTTGTCAAGAATTGGTTTTGTACTCTTTGAGTAAATGGGTTACTATCATTAAGCTTGCTTACTCTCTTAATTGTTTTTGTGAGGTGTGA

mRNA sequence

ATGAGATCTATCTGCTTATGCGACTTGGAGAAAAAACAAATGCAATGTTCGGACCGACACGACTATTGTAGATTCAGTGTTTATGCAACTGATCCATCAATTTGCAGTTCTTTAGTTCTTATTCTCAGTGCAACAATCCTTCTGGTGTTTGAAGAACATAACTTCGATCTCGTCACTTGTGAATGTCGGAGAACTTCTTCATCTTCACCGTCGAACACAGAAAAGATGTCGTCAACCTTCAGCGGCGATGAAACGGCGCCCTTCTTCGGCTTCCTCGGCGCTGCTGCGGCCCTCGTCTTCTCCTGTATGGGAGCTGCTTACGGAACGGCGAAGAGTGGGGTGGGAGTTGCGTCGATGGGAGTAATGAGGCCTGAGTTGGTTATGAAGTCGATTGTGCCGGTGGTTATGGCTGGAGTTTTGGGTATTTATGGGCTTATTATTGCTGTGATTATCAGTACGGGGATTAACCCTAAGGCCAAATCTTATTACCTCTTCGATGGCTACGCGCATCTTTCCTCTGGGCTTGCTTGTGGCCTTGCTGGTCTATCTGCTGGCATGGCTATTGGGATCGTCGGCGATGCTGGTGTTAGAGCCAATGCACAGCAGCCTAAGCTTTTCGTTGGGATGATTCTTATTCTAATTTTTGCCGAAGCTCTGGCTCTCTACGGACTTATTGTTGGCATTATTCTCTCTTCCCGAGCTGAATTGGTTTTGTACTCTTTGAGTAAATGGGTTACTATCATTAAGCTTGCTTACTCTCTTAATTGTTTTTGTGAGGTGTGA

Coding sequence (CDS)

ATGAGATCTATCTGCTTATGCGACTTGGAGAAAAAACAAATGCAATGTTCGGACCGACACGACTATTGTAGATTCAGTGTTTATGCAACTGATCCATCAATTTGCAGTTCTTTAGTTCTTATTCTCAGTGCAACAATCCTTCTGGTGTTTGAAGAACATAACTTCGATCTCGTCACTTGTGAATGTCGGAGAACTTCTTCATCTTCACCGTCGAACACAGAAAAGATGTCGTCAACCTTCAGCGGCGATGAAACGGCGCCCTTCTTCGGCTTCCTCGGCGCTGCTGCGGCCCTCGTCTTCTCCTGTATGGGAGCTGCTTACGGAACGGCGAAGAGTGGGGTGGGAGTTGCGTCGATGGGAGTAATGAGGCCTGAGTTGGTTATGAAGTCGATTGTGCCGGTGGTTATGGCTGGAGTTTTGGGTATTTATGGGCTTATTATTGCTGTGATTATCAGTACGGGGATTAACCCTAAGGCCAAATCTTATTACCTCTTCGATGGCTACGCGCATCTTTCCTCTGGGCTTGCTTGTGGCCTTGCTGGTCTATCTGCTGGCATGGCTATTGGGATCGTCGGCGATGCTGGTGTTAGAGCCAATGCACAGCAGCCTAAGCTTTTCGTTGGGATGATTCTTATTCTAATTTTTGCCGAAGCTCTGGCTCTCTACGGACTTATTGTTGGCATTATTCTCTCTTCCCGAGCTGAATTGGTTTTGTACTCTTTGAGTAAATGGGTTACTATCATTAAGCTTGCTTACTCTCTTAATTGTTTTTGTGAGGTGTGA

Protein sequence

MRSICLCDLEKKQMQCSDRHDYCRFSVYATDPSICSSLVLILSATILLVFEEHNFDLVTCECRRTSSSSPSNTEKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAELVLYSLSKWVTIIKLAYSLNCFCEV
Homology
[Close]
BLAST of CmoCh12G003740 vs. ExPASy Swiss-Prot
Match: Q43434 (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum OX=3635 GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.9e-76
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 76  MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 135
           MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 136 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 195
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 196 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159

[Close]
BLAST of CmoCh12G003740 vs. ExPASy Swiss-Prot
Match: Q96473 (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana OX=23013 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.9e-76
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 76  MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 135
           MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 136 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 195
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 196 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159

[Close]
BLAST of CmoCh12G003740 vs. ExPASy Swiss-Prot
Match: P59228 (V-type proton ATPase subunit c2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c2 PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 6.4e-76
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 76  MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 135
           M+STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 136 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 195
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 196 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159

[Close]
BLAST of CmoCh12G003740 vs. ExPASy Swiss-Prot
Match: P0DH92 (V-type proton ATPase subunit c1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c1 PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-75
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 78  STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 137
           STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 138 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 197
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 198 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 158

[Close]
BLAST of CmoCh12G003740 vs. ExPASy Swiss-Prot
Match: P0DH93 (V-type proton ATPase subunit c3 OS=Arabidopsis thaliana OX=3702 GN=VHA-c3 PE=1 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-75
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 78  STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 137
           STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 138 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 197
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 198 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 158

[Close]
BLAST of CmoCh12G003740 vs. ExPASy TrEMBL
Match: A0A6P6A480 (V-type proton ATPase proteolipid subunit OS=Durio zibethinus OX=66656 GN=LOC111306128 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 4.3e-75
Identity = 161/163 (98.77%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 72  NTEKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSI 131
           ++EKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSI
Sbjct: 27  SSEKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSI 86

Query: 132 VPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 191
           VPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV
Sbjct: 87  VPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 146

Query: 192 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 147 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 189

[Close]
BLAST of CmoCh12G003740 vs. ExPASy TrEMBL
Match: A0A5B6ZQ73 (V-type proton ATPase proteolipid subunit (Fragment) OS=Davidia involucrata OX=16924 GN=Din_015880 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 5.6e-75
Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 0 

Query: 72  NTEKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSI 131
           N +KMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSI
Sbjct: 36  NQKKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSI 95

Query: 132 VPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 191
           VPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV
Sbjct: 96  VPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 155

Query: 192 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 156 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 198

[Close]
BLAST of CmoCh12G003740 vs. ExPASy TrEMBL
Match: A0A5B7ABH9 (V-type proton ATPase proteolipid subunit (Fragment) OS=Davidia involucrata OX=16924 GN=Din_023460 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.6e-74
Identity = 161/164 (98.17%), Postives = 161/164 (98.17%), Query Frame = 0 

Query: 71  SNTEKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKS 130
           S   KMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKS
Sbjct: 35  STIRKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKS 94

Query: 131 IVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGI 190
           IVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGI
Sbjct: 95  IVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGI 154

Query: 191 VGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           VGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 155 VGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 198

[Close]
BLAST of CmoCh12G003740 vs. ExPASy TrEMBL
Match: A0A218WQ75 (V-type proton ATPase proteolipid subunit OS=Punica granatum OX=22663 GN=CDL15_Pgr021358 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.6e-74
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 74  EKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVP 133
           E+MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVP
Sbjct: 51  EEMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVP 110

Query: 134 VVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGD 193
           VVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGD
Sbjct: 111 VVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGD 170

Query: 194 AGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           AGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 171 AGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 211

[Close]
BLAST of CmoCh12G003740 vs. ExPASy TrEMBL
Match: A0A7J6EW84 (SWIRM domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_024506 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.8e-74
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 75   KMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV 134
            KMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV
Sbjct: 2023 KMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV 2082

Query: 135  VMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDA 194
            VMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDA
Sbjct: 2083 VMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDA 2142

Query: 195  GVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
            GVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 2143 GVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 2182

[Close]
BLAST of CmoCh12G003740 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 285.4 bits (729), Expect = 4.5e-77
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 76  MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 135
           M+STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 136 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 195
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 196 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159

[Close]
BLAST of CmoCh12G003740 vs. TAIR 10
Match: AT2G16510.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 283.1 bits (723), Expect = 2.2e-76
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 78  STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 137
           STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 138 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 197
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 198 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 158

[Close]
BLAST of CmoCh12G003740 vs. TAIR 10
Match: AT4G38920.1 (vacuolar-type H(+)-ATPase C3 )

HSP 1 Score: 283.1 bits (723), Expect = 2.2e-76
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 78  STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 137
           STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 138 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 197
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 198 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 158

[Close]
BLAST of CmoCh12G003740 vs. TAIR 10
Match: AT4G34720.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 283.1 bits (723), Expect = 2.2e-76
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 78  STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 137
           STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 138 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 197
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 198 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 158

[Close]
BLAST of CmoCh12G003740 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 282.0 bits (720), Expect = 5.0e-76
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0 

Query: 77  SSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 136
           SS FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 3   SSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 62

Query: 137 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 196
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV
Sbjct: 63  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 122

Query: 197 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 235
           RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA
Sbjct: 123 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 160

The following BLAST results are available for this feature:
BLAST of CmoCh12G003740 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q434342.9e-76100.00V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum OX=3635 GN... [more]
Q964732.9e-76100.00V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana OX=2... [more]
P592286.4e-7699.37V-type proton ATPase subunit c2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c2 PE=2 S... [more]
P0DH923.2e-75100.00V-type proton ATPase subunit c1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c1 PE=2 S... [more]
P0DH933.2e-75100.00V-type proton ATPase subunit c3 OS=Arabidopsis thaliana OX=3702 GN=VHA-c3 PE=1 S... [more]
BLAST of CmoCh12G003740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6P6A4804.3e-7598.77V-type proton ATPase proteolipid subunit OS=Durio zibethinus OX=66656 GN=LOC1113... [more]
A0A5B6ZQ735.6e-7598.77V-type proton ATPase proteolipid subunit (Fragment) OS=Davidia involucrata OX=16... [more]
A0A5B7ABH91.6e-7498.17V-type proton ATPase proteolipid subunit (Fragment) OS=Davidia involucrata OX=16... [more]
A0A218WQ751.6e-7499.38V-type proton ATPase proteolipid subunit OS=Punica granatum OX=22663 GN=CDL15_Pg... [more]
A0A7J6EW842.8e-74100.00SWIRM domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_024506 PE=3 ... [more]
BLAST of CmoCh12G003740 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G19910.14.5e-7799.37ATPase, F0/V0 complex, subunit C protein [more]
AT2G16510.12.2e-76100.00ATPase, F0/V0 complex, subunit C protein [more]
AT4G38920.12.2e-76100.00vacuolar-type H(+)-ATPase C3 [more]
AT4G34720.12.2e-76100.00ATPase, F0/V0 complex, subunit C protein [more]
AT1G75630.15.0e-7699.37vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000245V-ATPase proteolipid subunitPRINTSPR00122VACATPASEcoord: 105..129
score: 82.74
coord: 131..155
score: 71.05
coord: 182..208
score: 85.77
coord: 209..232
score: 82.68
NoneNo IPR availableGENE3D1.20.120.610coord: 86..237
e-value: 8.8E-64
score: 215.7
NoneNo IPR availablePANTHERPTHR10263V-TYPE PROTON ATPASE PROTEOLIPID SUBUNITcoord: 78..234
NoneNo IPR availablePANTHERPTHR10263:SF63V-TYPE PROTON ATPASE PROTEOLIPID SUBUNITcoord: 78..234
NoneNo IPR availableCDDcd18176ATP-synt_Vo_c_ATP6C_rpt2coord: 164..231
e-value: 1.06772E-35
score: 119.918
NoneNo IPR availableCDDcd18175ATP-synt_Vo_c_ATP6C_rpt1coord: 88..155
e-value: 3.05955E-36
score: 121.488
IPR011555V-ATPase proteolipid subunit C, eukaryoticTIGRFAMTIGR01100TIGR01100coord: 88..196
e-value: 2.5E-51
score: 170.4
IPR002379V-ATPase proteolipid subunit C-like domainPFAMPF00137ATP-synt_Ccoord: 92..151
e-value: 2.1E-13
score: 50.4
coord: 172..230
e-value: 6.0E-20
score: 71.3
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 89..152
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 162..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G003740.1CmoCh12G003740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006325 chromatin organization
biological_process GO:0016570 histone modification
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0015078 proton transmembrane transporter activity