CmoCh12G003410 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G003410
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	GDSL esterase/lipase EXL3-like
Location	Cmo_Chr12: 2120591 .. 2129858 (+)
RNA-Seq Expression	CmoCh12G003410
Synteny	CmoCh12G003410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTTACTCCACTTCACAATAGCAGTCAAGCTTTTCCTTTGTCTTCAACTAGCTAGTGCTACTATAAACATTCCTCCCGGTTACTCGGTCCCCGCGGTTTTCGTGTTCGGGGATTCAGTTGTCGATACAGGCAACAATAACAATCTCATCACTCAAGCTAAGTGCAACTATCCGCCGTACGGTAGGGATTTTCTCGGTCAACAGGCAACCGGGCGATTTTCCAATGGCAGAGTTCCCTCCGACCTTCTAGGTCTAAACTAACCCGTTCGATTAAATTGTAGAGGTTCAAATTTTTTTCGGTTACATGGCTTGGACCAATGTTATCGATTTCTTTTTGTTTGTTTTGTTAGTTGATGCGTTGGGTATCAAAGAATTTTTACCACCGTATGCTAACCCGAGTCTACGGCCCGAAGACCTAATTACGGGTGTCAATTTTGCTTCTGGTGGTGCTGGATTTGATCCTCTGACCTCTCGATTAGCGGTAATGAATAAACTTTGAACACGGGACGATATTTTGAATGATATGCTAAACGGGTTCTTGAATTTTCAGCCAGCAATATCACTTGAAGATCAATTAGGCATGTTTAGGGAATACTCAAAGAAGCTAGAAGAACTAGTGGGAGTAGCAAGAGCAAAGTTCATAATAGCCAATGGCTTGTTCATGGTGGTGGCGGGAAGCAACGACATTGCCAACACATTTTATCTTGCAAGAATAAGGCAAATTCATTTCAATATCAACTCGTACACTGATTTCATGGCTCGGTATGCTTCCGCTTTTGCTAAGGTACAAAGTTTAGTCTCTCGACTTTCATATTTATATTCAATTTCTATTTTTTAATTTAAAAAATATTTAGTTTGTATGCATTGGAAGGGAACAAAACATTTCTCATAAGGGTGTGGAAACCTCTCACCAGCAGATGTGTTTTAAAACCTTGAGTGGAAGCCCAGTGAAAGCACAAAGAAGACAATATCTTCTAGCGATGGGCTTGAGCTGTTACAAATGGTATCAGAGCTAGAGACCAAGTGGAGTGCCAGCGAAGACGCTAGGCCCCCAAAGAAAGTGGATTTTGAGATCCTACATCGGTTGGAGAGGGGAACGTTCGTGTGGAAACCTCTTCCTAGTAGGCGCGTTTTAAAACCTTGAGTGAAAGCCCAGAAGTGAAAACCCAAAGAAGACAATATCTGTTAGCGATGGGCTTGGGCTGTTACAAATGGTATTAGAGCTAGACACCGGGCGGTGTGCCAATGAGGACGATGGTCCCCGAAGGGAAGTGGATTGTGAGATCCTACATCGGTTGGAGAGGGGAACGTTTCTTATAAGGATATGGAAACTTCTCCCGAGTAGAAGCAAGGAAAGTCGAAAGAGGACCACATCTTTTTCATCTAAATTTTAATGTGTTTATTTTCTTTAAAGGAATTGTATGCAACCGGTGGGCGGAGAATCGGATTCTTCGGGGCACCGCCGTTGGGGTGTGTGCCGTCGCAAAGAACCTTGGCTGGCGGGATTGAAAGGGTGTGCGTGAATGAGTACAACGCTGCTGCAGAGCTCTTCAATGGAAAATTGCACATCGCTTTGAATCAACTTCAAACTTCACTGCCTAACAGTAAACTAATTTACGTGGATATTTACAATCCTCTTCTTGACGTCATCCAAAACTATCGTAAATATGGTATTCAATCATCTCTCCCTCTCCATCTACTGAAAATTAGTGTAGACGCTCGTATGACTATTCTACTGAAAATAATAGCAAATCGTGCACAAGCTTAACCGAACGATTTGAAAAGCTGAAAACGTTCGTAATTGTTATTATTTTAGGGTTTGACGTTGCGGATAGAGGGTGTTGTGGAAGTGGGAAGATCGAGGTGACGTTTCTTTGTAACAAATTCGTGAAGACCTGCAATGATCCCAACAAGTTCGTGTTTTGGGATAGTTTTCATCCAACCGAAGCTACATACAGCTACCTCGTCGCTCCAATCATCCAAAAATATATTTCTAAATTCCTATAGTTTAATTAAAATTTAATTTTCATAAAAAAATATATTTCAAAATTGAAGGCAAAAAAGGATGTGTAACTTTAATTCTCTCAATTATATATGTATTATCATTTTGTTTACATTAATGATGAGCTAATAATTAATGATTTTTTAATTAATTATTAATATATTGTTATTATTAATTCAATTTTATCAAGAATAACAAAAAGCATATAATTAATAAATATTAAATTAAAAATGAGGACACGTGGCTAGTCTTCAATTGTCACATCACTTTCGTTGGAGTAATGCAATAATAGAGACACGTGGCTAGTTTTAAATTTTATTTTGTGTTCTTTAAAATATATTATATTTTATATGCTAAATTACTTTAATAAAAAAATTTAATTAAAAGTTTTATTTGTTTATTTTGAAAAGTGTTTCAAAAATATCTTTGAGTTGTCGATCATCTCCGTCCACGGGCATTGTTGACTACAATAATGGAAAATAAGGTATATGTACGAAAATGCTATTAAACTCAATCATAAACTAAAAATGTCAGTCGTATCCCTCAAACTAATAGTTATATGTAGTAAGCTGTTGTTGTTGTCGTCTTTTGCTTACATTCCCATATAACACCAATTTCAATTTCTCGAATCTTGCTTTCAAAACTCTCTTTCGAAATCTCTCTGCCTCGTTTTCTAAAACTTTCTTCTTGAATTGAGGCCAAAGGCTCGAGCATACGTCGCTTGGTCGTAAGCGACGCAAGAACGAATAGGCTTAACTCACTTGTGTGCTGAAAAGTGAGTGTCGCACAATCGCATGTCCGTTGCCATCCAAGTGTGATTGTGACAAGTCGAATGTTGGTACAAACAAGCACAATTTGATGGTATTGCTTCAAACTTTAAAAATAATTACATAATTAAAATATTATATGTCGAGACGTTGGGAGGAGAAGAGAAAGAAATATAGAGATATATGGTACCAAGACTCGAGAGATAGTCGATATTGTGAGATTCCATATCGGTTAGAGAGGGGAACGAAACATTCTTTTTTTTATACAGACGTGGAAATCTCTCCCTAATAGATGCGTTTTAACATGGGGGAAACTCAGGAGAGAAAGCCCAAAGAGAACAATATCCGTTAGCGATGGGCTTGGATGGTTTCAAATGGTGTCAGAGCCAGACACCGAACGGTGTGCCAACAAGGACGTTAGGCTCCAAGAAAAGTGGATTGTGAGATCCCACATTGATAATTACAAATGGTATAGAGCCAACTTGGACGGTTACAAATGGTACGAGAGTCAGCTTGGGCCGTTACAAATGATATCATGAGATCCCATATTGGTTGTTATAAATGGTAGTCCAAGGTCACTGCCTAAAAAAAATAAAATAAAAATAAAAATAAAAATAAATAAATAAAAAGGAAAAAGTCATATTATTTTTTGACGTCTTTTAAATTCATGATTAGATGTCCGTTTTAGTGTCGGCGACCTAATTGACGGCTAACCTTGCGGTTGCCGCCGTCCTTCAAATTCAGAGCTTCAACGCGCTTGCTGAGATCGAATTCAACTGCTTGAAGATTAAAGAGAGAATCATAGGCGACACTTCTGGTCGGTCCAATCACTGATCTTCTGGTTCCCCGAAATGGAGCCGATTACATTTATCGTCGACAAATTAAAAGATTTCGGGACCGCAAGCCACAATTTCTTCGATGGTTTAGTTCGTCGCCGCCAACAATCATCTCGCCGCCGTCCGGTAATGGTTCATGTATTATAGTCTCGTAGTATGTGTTTCTTCACGTCTGAAAATGGCGGTTCTCGTTGTTCCTATGAATTGTGATACTGTTTTTAGTTTCTATTTGTCCATTTCCACTTGTGTTTGGAGTAGGATGACTTCGGTTTTACTGGCTCATTCTGTACAGAAACTTTGAGTCTCCAAAGTTAGAAGGTTATGTGTTAACACTGTTGCATGTTGCCCTATGACCGTCCTTGGCTGAAATTTTTAATGAATATTCTCAATTGGCTTTGGAATTTTATACATTAGCGTAAATGACTCTGGTAATTACATGGCGATTAAGGTGTTTTGTTCTACCAGTTTTATTCTAAAACGAATTTAAGTAGCCAATTTAGGTAACTTTGCTGGTACATTATTTCAGATTGAAATCCTGAAGCGGCTGCAAAGGGAAACATTTTCAGATTTAATGAGACTTAGAGACAGACAAGAAAAGGTAGAGAAGGTACTATCCTTTAACAATACACAGAGGAGTAGTCCATTGCAAGAAAATGGCACTCATGTAAGAGGAGAGGTTGATATATTGGGTGCATTACTATTGATGAGTGTTATTGATAATCATAGCCTCAAAACACTTCGTAGAGCTGGAATCTCAACAGGAATTCACTCGAGATTGACTTTTGAAACGACTGTAAGAGAAAACGATTCTCTTGTTGCAGAGTTCGTGGCCAATCAGAAAGCCAAGGTGGATTTTGGTGTTGACTCTGGAAGTGAACTTACTCTATCTAAAGTTCTTTATAAGGCTAGTGTGAGAGATTGGATGTCTGCAATTGTAGCGCCTATTGGAGCTCGATGTAGGGATGTTGCTATAATTGCAAGCCCTTCTCGTCAGGTATATTTAGTTGCGATTACGTTTTTCTATCTATTGTTAGTATGACTGTTTGCTTATCAAGTTCTATACGAGTTTACTAGATTAGTATTTAATTTCGTGGGGCACTTTTAGGTTGAGGTAATAACCTTCATCCTAATGTAGTTAGGACGGAGTAAGCCACTCCATTTACTAGATTACCTTTGGACACTCACAAGCATAAAACCTTTATCATAATCCTTAAGTAGACTATCCAAGAATTAGCAAATGGATTGACATCTACCGTTTAGATTGATATAAGATTGGAAGGAGATGATATACCCCTCTCTCTCTCTCTCTTGCGAGTAAAGGTGTTTGAGACATTGCCCGAGTTTTTTTTTTTTTTTTTTTTCATTGAGAGAAAGATCAACATCAAATTTGAGTTCGGTCAGTCATAGGGTTATTTCTAGTCTAGTCTAGAATCAAGACCAAACAAAGCTTCACCTTAACTACGTACAAGGTACCTATGAAAACCTTGACCGTGGTGGACGCATGCACTCACAACTCAAAAGTCAAGCGAAAGATGCCCCTTTCTAGATAGAAAGAGAGGGTGAAACAAATCACGGCTATGAAAGATATATCACATGATTCTCTTGTAATCTCCCTCCATCAGAATGAAAGTTGCTAAGATCAAATGTGAATATAGCTCAAATTGAAAAGGCCATTGTAATTTTTTGGGTCATTCTCTTTTTCTTTTATGTGTATTCCGTTCAAATTATAGTTTAGTATCAGTATTAATCTAACTCTCGACAGTTTTGTTGTATGATCTGATGTTATAGGAATGCTTGTCGTCTAATATTTAATATCGGCGTAGAATTTGAACTCAAATTATATGGTGGTACTTTTTGTTGCGTAAAATATTGCCTGAGCCAGTTATATGCTCATATCGGTTACCAATTCGAATCAACTATTTATGTTCGTGAATGCTCTCGAGTACTTTCCATCGAAGACTATGTTCTAGTTGGCGTATAATTCATGAAGTTTAATCTATATGGTTTTTCTATGTGGTAGGAAAAGGGTCTTACAGACATTTCATCTTTTGGACCACCCCTTTTGGATCAGCCAAATGGTGGCGCCATTGGTTTAACGGTGAGAAGATCCAATGTTACTGCTTCCTTAGCTCAATTCATTTCAACAGAGGAAATACAACCAAGTTTTGGTCGGATTCAGCATTGCTTTAATACATTTGGACAACTGGTGTGTCAATTCTCAAGAGGAACAAAGCTCTCACTACTGGGTCTTCTCCAAGCGCCAAAATTATGCAATCAACACATCGATCTCGGAGCCCTTACAATTTCAGTCGGTCTTGGGAGTCGACATGAATCTTCTGAAACAGCTGCGACACCTGATTCATGTTTGTTAACAGCGTCGAGGAAAGCTATTTCAAGAGGATCTATGGCTTTACTGTTGGAGTCGGAACTCGACGAAGTGATCAGACTTGGAGGTTGGGTTGAGGTGAGGCAATCAAATCCGAATGACGTGCAATGGGCTGTGTCGATGTCTGATAATAATAGTGAAGAGGCATTAGGTTGGGGAATGAACTTAGGTGGGATTCATGGAGGCACATCAGGTACAGATCACTTTCAGATTGAATCATATATCAAACTGAACATGAGTAAGAGATTCAACGTAAAGCCAGGAATTGCATATGTGACCGACGGCGATGCCTATATGATGGCCTTGCTGGTTCGGTCTAACTGGTCTATATGATACCCATCTTATGAAGAAATATCATTTTGAGAGCTTGTCGATCCGTGCAAAGAACTGACTTAAACTTAGTCCTTGTGAAAGGTCCATAGTGCCTTCCAGCATTTGGGTGTGGATGTCAATATTATATTCATGCACGTCATAAGCAAAGGAATACCGGAAGAAATTGATATTTTTTTTAGATAAGGTTTTAAACATGTGGGAATCCGACAAAGGTCGATGCACAGGATAATCCAAAATCATTGTAGAGCATTTCAAGAAGTCGGTATTCATCTCGGTCAAGTCTACCGCTAGCAGATATTGTCCTCCTTTGGATTTCCCTTTCGGACTTCCTCTCAAGATTTTTAAAACGCGTTTGTTAGGAAGAGGGTTTCGGACTCTTATAAAAATGTTTTATTTTCTTTTTCAACCGAGGCGGGAGTTCATATTTTGAACCCTGTGGAAACCTAGAGTCATCTTGGGTATGATGGGCGATCCAAGATAATCCAAAGTCGCCTTGGAGCGCTTAAATTATCGTAAGAAATTAATATTCATCTTTCTACACTAGATTCTTAAACTTATACTTCTAGATTATAGACCTTTTAAACCTACCGGCCTTTTAGATTATTATTAAACATATCCTCTTCTCATATCAACCACATGCCAAGATTACGTTAACAACTTTTTTCATCCAATAGAATAGAAAATTTAATTACAAATAAAACATTAATTACGAAGTTTTATGGCATAAATCTTAACATAAAAATCTCTCCGTCTCAATTAACTTACCGATCAAACCTAGTATGACAAATACCACGTGACTTCTTCTTTAAGACTCGTTCTTATTCTTTTAAACAAATTTATTGTTGTTGTCACGTGAATACCCGGTGCAATATTCTAAACCATTAAATTTTTTTGTCAACAGTTAATTTTGAAATATTTAAGAATGAATGAATATTATATTTTAAGATTTAGAAAAATAAATATAATTTTGAATGAAACATGAAGGATTTATAATATATATAAAAATCCTATAATTAAATAAATAAATAAATAAATATATATATATATATATATATATATAATTTAGGCTAAGAAACGTGGTTATCGGTGGATTTTGCACTTGAAAACCCATTTTGTGGTCACCGTTTGGTTTTCGTCCGCTTTAGCAAATCGCGACTCTCTCTTTCTCTTTCTCTCTCTCTCTCTTTGGGTTTCAGACCTCACCGAATCTTCGAGAAAGGAGATACGGCACCATGTCTTCAGGGAGGAAGATCACGTTGAAAAGCTCCGATGGCGAGATCTTTGAGGTTGACGAAGCCGTCGCCTTGGAGTCACAGACGATCAAGCACATGATTGAAGACGATTGCGCCGATAGTGGAATCCCTCTCCCTAACGTGAACAGCAAGATCTTGTCCAAGGTTATCGAGTACTGCAAGAAGCACGTCGAGTCTCCCAAGCCGGAGGATCGTGCTGGCTCCGTCGAGGACGACCTCAAGACTTGGGACAGCGAATTCGTCAAAGTCGACCAGGCGACCTTGTTCGATCTCATTCTGGTATGCGGATGATACTTTCTAAATTTTCTTGCGGTTTCTTGCGGTTTTGTCCTTTTTTTTCCCTCTGTATCAATGCCCTCCGATTGTTCTCTTTTTGTGGCTAATTTCGGGTCTAGGGTTTGGATACTGCTTAGATTTGGGGTAAGGTTCTTTCGGTTCTTGTTTCGTTACGTACCCTATGGTTGCATAATACGTTTTCTGTTTTGGTATGATTTCTGAATCAGATATCTTACATTGTGAATAAGATATTGCAAAATTACTGAAACATGATAGCCGCCTGCTGTTATATGTGACATCTATAGCTATATTTTAGAACGGGAGTCGGTAGGGGAGTTTATTTATTGATTTGTAAGGGCTTTGTATGGGAGGTTCACAAATGTTTGTCATTGAGAAGGCTTTTGATGTATTAGGCGTTTGGCTGCAATCTTTATTCCTTATATAATCTTTGTTTGGAATTGTTACACTAAAACATGCGCGGTATATGTCCTGTTTATCGAGTGATGAAATTCATGTACACCAACAATAGCCATTCCAACTTGTTTTCTGTTTAATCCGATACAATCTTTTATGTTTTGGTTATGGCTGTAACATTTGTTTAGTTGAGGTAATTCGATGTCAATTGCTTATTTTCAAGTGGGATATGGGTGAATCTCTTTCCTCTTACCAGTTTATCTTGATCTTTCCTGGTTTTATTGATTTTATTTCTACTTTTGTTCCTTCCTAATAAGATTTAAACGAATTTTTTTATTTACCCGTTTCGAACTTGCTAACGTTTCGAACTTGCTAATCATATGATAATTATTCTTTGTTTTTATTTATGTGTGTGTGTGACTGTGTGTTTATATTTTATGGTTTATCTGAAATTTACTCGTTCTGTGTTGTATTTAGTTGAATTATTTCATCATCTTTTTTGACAAATGACTAACTTGAATCCACCTTAAATCCCTTTGGAAGAGTTAATGGTTTTCGTTGAGAGCTTAAAAATTAGGCTTTATAAATTAATGTTGTTTTGTTTTGTAAATTACATTGACAACCATAGTAACTTCATACGGTTGTTTGGTGAGAGAATAGTCGAGGAGTGCACACAAGATGTGCTTGGTATATATTGTGAGACGACACGGTTGACGCTCCCCCAAGTAGAGAGGCATCACCGTAACTTTTTGTTTCTTTTCGTTCCCTTAACTTGTGATAAGGGATAATGATGGTCAGAATCTAATCCTACATGACATTTGCAGGCTGCAAACTATCTCAATATCAAGAGCTTGCTAGATTTGACTTGTCAGACGGTGGCTGACATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACATTTAACATCAAGAATGACTTCACACCCGAGGAAGAGGAGGAAGTTCGTAGGGAGAATCAATGGGCGTTCGAGTAA

mRNA sequence

ATGCCTTTACTCCACTTCACAATAGCAGTCAAGCTTTTCCTTTGTCTTCAACTAGCTAGTGCTACTATAAACATTCCTCCCGGTTACTCGGTCCCCGCGGTTTTCGTGTTCGGGGATTCAGTTGTCGATACAGGCAACAATAACAATCTCATCACTCAAGCTAAGTGCAACTATCCGCCGTACGGTAGGGATTTTCTCGGTCAACAGGCAACCGGGCGATTTTCCAATGGCAGAGTTCCCTCCGACCTTCTAGTTGATGCGTTGGGTATCAAAGAATTTTTACCACCGTATGCTAACCCGAGTCTACGGCCCGAAGACCTAATTACGGGTGTCAATTTTGCTTCTGGTGGTGCTGGATTTGATCCTCTGACCTCTCGATTAGCGCCAGCAATATCACTTGAAGATCAATTAGGCATGTTTAGGGAATACTCAAAGAAGCTAGAAGAACTAGTGGGAGTAGCAAGAGCAAAGTTCATAATAGCCAATGGCTTGTTCATGGTGGTGGCGGGAAGCAACGACATTGCCAACACATTTTATCTTGCAAGAATAAGGCAAATTCATTTCAATATCAACTCGTACACTGATTTCATGGCTCGGTATGCTTCCGCTTTTGCTAAGATTGAAATCCTGAAGCGGCTGCAAAGGGAAACATTTTCAGATTTAATGAGACTTAGAGACAGACAAGAAAAGGTAGAGAAGGTACTATCCTTTAACAATACACAGAGGAGTAGTCCATTGCAAGAAAATGGCACTCATGTAAGAGGAGAGGTTGATATATTGGGTGCATTACTATTGATGAGTGTTATTGATAATCATAGCCTCAAAACACTTCGTAGAGCTGGAATCTCAACAGGAATTCACTCGAGATTGACTTTTGAAACGACTGTAAGAGAAAACGATTCTCTTGTTGCAGAGTTCGTGGCCAATCAGAAAGCCAAGGTGGATTTTGGTGTTGACTCTGGAAGTGAACTTACTCTATCTAAAGTTCTTTATAAGGCTAGTGTGAGAGATTGGATGTCTGCAATTGTAGCGCCTATTGGAGCTCGATGTAGGGATGTTGCTATAATTGCAAGCCCTTCTCGTCAGGAAAAGGGTCTTACAGACATTTCATCTTTTGGACCACCCCTTTTGGATCAGCCAAATGGTGGCGCCATTGGTTTAACGGTGAGAAGATCCAATGTTACTGCTTCCTTAGCTCAATTCATTTCAACAGAGGAAATACAACCAAGTTTTGGTCGGATTCAGCATTGCTTTAATACATTTGGACAACTGGTGTGTCAATTCTCAAGAGGAACAAAGCTCTCACTACTGGGTCTTCTCCAAGCGCCAAAATTATGCAATCAACACATCGATCTCGGAGCCCTTACAATTTCAGTCGGTCTTGGGAGTCGACATGAATCTTCTGAAACAGCTGCGACACCTGATTCATGTTTGTTAACAGCGTCGAGGAAAGCTATTTCAAGAGGATCTATGGCTTTACTGTTGGAGTCGGAACTCGACGAAGTGATCAGACTTGGAGGTTGGGTTGAGGTGAGGCAATCAAATCCGAATGACGTGCAATGGGCTGTGTCGATGTCTGATAATAATAGTGAAGAGGCATTAGGTTGGGGAATGAACTTAGGTGGGATTCATGGAGGCACATCAGGTACAGATCACTTTCAGATTGAATCATATATCAAACTGAACATGAGTAAGAGATTCAACGTAAAGCCAGGAATTGCATATGTGACCGACGGCGATGCCTATATGATGGCCTTGCTGACCTCACCGAATCTTCGAGAAAGGAGATACGGCACCATGTCTTCAGGGAGGAAGATCACGTTGAAAAGCTCCGATGGCGAGATCTTTGAGGTTGACGAAGCCGTCGCCTTGGAGTCACAGACGATCAAGCACATGATTGAAGACGATTGCGCCGATAGTGGAATCCCTCTCCCTAACGTGAACAGCAAGATCTTGTCCAAGGTTATCGAGTACTGCAAGAAGCACGTCGAGTCTCCCAAGCCGGAGGATCGTGCTGGCTCCGTCGAGGACGACCTCAAGACTTGGGACAGCGAATTCGTCAAAGTCGACCAGGCGACCTTGTTCGATCTCATTCTGGCTGCAAACTATCTCAATATCAAGAGCTTGCTAGATTTGACTTGTCAGACGGTGGCTGACATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACATTTAACATCAAGAATGACTTCACACCCGAGGAAGAGGAGGAAGTTCGTAGGGAGAATCAATGGGCGTTCGAGTAA

Coding sequence (CDS)

ATGCCTTTACTCCACTTCACAATAGCAGTCAAGCTTTTCCTTTGTCTTCAACTAGCTAGTGCTACTATAAACATTCCTCCCGGTTACTCGGTCCCCGCGGTTTTCGTGTTCGGGGATTCAGTTGTCGATACAGGCAACAATAACAATCTCATCACTCAAGCTAAGTGCAACTATCCGCCGTACGGTAGGGATTTTCTCGGTCAACAGGCAACCGGGCGATTTTCCAATGGCAGAGTTCCCTCCGACCTTCTAGTTGATGCGTTGGGTATCAAAGAATTTTTACCACCGTATGCTAACCCGAGTCTACGGCCCGAAGACCTAATTACGGGTGTCAATTTTGCTTCTGGTGGTGCTGGATTTGATCCTCTGACCTCTCGATTAGCGCCAGCAATATCACTTGAAGATCAATTAGGCATGTTTAGGGAATACTCAAAGAAGCTAGAAGAACTAGTGGGAGTAGCAAGAGCAAAGTTCATAATAGCCAATGGCTTGTTCATGGTGGTGGCGGGAAGCAACGACATTGCCAACACATTTTATCTTGCAAGAATAAGGCAAATTCATTTCAATATCAACTCGTACACTGATTTCATGGCTCGGTATGCTTCCGCTTTTGCTAAGATTGAAATCCTGAAGCGGCTGCAAAGGGAAACATTTTCAGATTTAATGAGACTTAGAGACAGACAAGAAAAGGTAGAGAAGGTACTATCCTTTAACAATACACAGAGGAGTAGTCCATTGCAAGAAAATGGCACTCATGTAAGAGGAGAGGTTGATATATTGGGTGCATTACTATTGATGAGTGTTATTGATAATCATAGCCTCAAAACACTTCGTAGAGCTGGAATCTCAACAGGAATTCACTCGAGATTGACTTTTGAAACGACTGTAAGAGAAAACGATTCTCTTGTTGCAGAGTTCGTGGCCAATCAGAAAGCCAAGGTGGATTTTGGTGTTGACTCTGGAAGTGAACTTACTCTATCTAAAGTTCTTTATAAGGCTAGTGTGAGAGATTGGATGTCTGCAATTGTAGCGCCTATTGGAGCTCGATGTAGGGATGTTGCTATAATTGCAAGCCCTTCTCGTCAGGAAAAGGGTCTTACAGACATTTCATCTTTTGGACCACCCCTTTTGGATCAGCCAAATGGTGGCGCCATTGGTTTAACGGTGAGAAGATCCAATGTTACTGCTTCCTTAGCTCAATTCATTTCAACAGAGGAAATACAACCAAGTTTTGGTCGGATTCAGCATTGCTTTAATACATTTGGACAACTGGTGTGTCAATTCTCAAGAGGAACAAAGCTCTCACTACTGGGTCTTCTCCAAGCGCCAAAATTATGCAATCAACACATCGATCTCGGAGCCCTTACAATTTCAGTCGGTCTTGGGAGTCGACATGAATCTTCTGAAACAGCTGCGACACCTGATTCATGTTTGTTAACAGCGTCGAGGAAAGCTATTTCAAGAGGATCTATGGCTTTACTGTTGGAGTCGGAACTCGACGAAGTGATCAGACTTGGAGGTTGGGTTGAGGTGAGGCAATCAAATCCGAATGACGTGCAATGGGCTGTGTCGATGTCTGATAATAATAGTGAAGAGGCATTAGGTTGGGGAATGAACTTAGGTGGGATTCATGGAGGCACATCAGGTACAGATCACTTTCAGATTGAATCATATATCAAACTGAACATGAGTAAGAGATTCAACGTAAAGCCAGGAATTGCATATGTGACCGACGGCGATGCCTATATGATGGCCTTGCTGACCTCACCGAATCTTCGAGAAAGGAGATACGGCACCATGTCTTCAGGGAGGAAGATCACGTTGAAAAGCTCCGATGGCGAGATCTTTGAGGTTGACGAAGCCGTCGCCTTGGAGTCACAGACGATCAAGCACATGATTGAAGACGATTGCGCCGATAGTGGAATCCCTCTCCCTAACGTGAACAGCAAGATCTTGTCCAAGGTTATCGAGTACTGCAAGAAGCACGTCGAGTCTCCCAAGCCGGAGGATCGTGCTGGCTCCGTCGAGGACGACCTCAAGACTTGGGACAGCGAATTCGTCAAAGTCGACCAGGCGACCTTGTTCGATCTCATTCTGGCTGCAAACTATCTCAATATCAAGAGCTTGCTAGATTTGACTTGTCAGACGGTGGCTGACATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACATTTAACATCAAGAATGACTTCACACCCGAGGAAGAGGAGGAAGTTCGTAGGGAGAATCAATGGGCGTTCGAGTAA

Protein sequence

MPLLHFTIAVKLFLCLQLASATINIPPGYSVPAVFVFGDSVVDTGNNNNLITQAKCNYPPYGRDFLGQQATGRFSNGRVPSDLLVDALGIKEFLPPYANPSLRPEDLITGVNFASGGAGFDPLTSRLAPAISLEDQLGMFREYSKKLEELVGVARAKFIIANGLFMVVAGSNDIANTFYLARIRQIHFNINSYTDFMARYASAFAKIEILKRLQRETFSDLMRLRDRQEKVEKVLSFNNTQRSSPLQENGTHVRGEVDILGALLLMSVIDNHSLKTLRRAGISTGIHSRLTFETTVRENDSLVAEFVANQKAKVDFGVDSGSELTLSKVLYKASVRDWMSAIVAPIGARCRDVAIIASPSRQEKGLTDISSFGPPLLDQPNGGAIGLTVRRSNVTASLAQFISTEEIQPSFGRIQHCFNTFGQLVCQFSRGTKLSLLGLLQAPKLCNQHIDLGALTISVGLGSRHESSETAATPDSCLLTASRKAISRGSMALLLESELDEVIRLGGWVEVRQSNPNDVQWAVSMSDNNSEEALGWGMNLGGIHGGTSGTDHFQIESYIKLNMSKRFNVKPGIAYVTDGDAYMMALLTSPNLRERRYGTMSSGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPKPEDRAGSVEDDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE

Homology

[Close]

BLAST of CmoCh12G003410 vs. ExPASy Swiss-Prot
Match: Q9FHW7 (SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.3e-68
Identity = 135/171 (78.95%), Postives = 146/171 (85.38%), Query Frame = 0


Query: 600 MSSGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 659
           MS+ RKITLKSSDGE FE+DEAVALESQTIKHMIEDDC D+GIPLPNV SKILSKVIEYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 660 KKHVESPKPED--------------RAGSVEDDLKTWDSEFVKVDQATLFDLILAANYLN 719
           K+HVE+ +  +               +GS ++DLKTWDSEF+KVDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 720 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 757
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]

BLAST of CmoCh12G003410 vs. ExPASy Swiss-Prot
Match: Q6PL11 (SKP1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP1 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.9e-64
Identity = 130/166 (78.31%), Postives = 140/166 (84.34%), Query Frame = 0


Query: 604 RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHV 663
           + ITLKSSDGE FEV+EAVA+ESQTI+HMIEDDCAD+GIPLPNVNSKILSKVIEYC KHV
Sbjct: 8   KMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHV 67

Query: 664 E-----SPKPEDRAGSVE--------DDLKTWDSEFVKVDQATLFDLILAANYLNIKSLL 723
                 + K  D A S          +DLK WD++FVKVDQATLFDLILAANYLNIK LL
Sbjct: 68  HAAAAAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVDQATLFDLILAANYLNIKGLL 127

Query: 724 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 757
           DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEE+RRENQWAFE
Sbjct: 128 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 173

[Close]

BLAST of CmoCh12G003410 vs. ExPASy Swiss-Prot
Match: Q39255 (SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.5e-64
Identity = 123/159 (77.36%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 602 SGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKK 661
           S +KI LKSSDGE FEV+EAVALESQTI HM+EDDC D+G+PLPNV SKIL+KVIEYCK+
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 662 HVESPKPE----DRAGSVEDDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTV 721
           HVE+   +    + A + +DDLK WD++F+K+DQATLF+LILAANYLNIK+LLDLTCQTV
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121

Query: 722 ADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 757
           ADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]

BLAST of CmoCh12G003410 vs. ExPASy Swiss-Prot
Match: Q651E8 (SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 5.2e-62
Identity = 124/165 (75.15%), Postives = 140/165 (84.85%), Query Frame = 0


Query: 606 ITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVE- 665
           ITL+S +G++FEV EAVA+ESQTI+HMIED CAD+GIPLPNV++KILSKVIEYC KHVE 
Sbjct: 11  ITLRSCEGQVFEVAEAVAMESQTIRHMIEDKCADTGIPLPNVSAKILSKVIEYCSKHVEA 70

Query: 666 -------------SPKPEDRAGSVEDDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLD 725
                        +P   +   +VED+LKT+D+EFVKVDQ+TLFDLILAANYLNIK LLD
Sbjct: 71  RGGAAAAADGDAPAPAAVEANKAVEDELKTFDAEFVKVDQSTLFDLILAANYLNIKGLLD 130

Query: 726 LTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 757
           LTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 131 LTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 175

[Close]

BLAST of CmoCh12G003410 vs. ExPASy Swiss-Prot
Match: Q9LNT9 (SKP1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=ASK4 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.5e-56
Identity = 114/158 (72.15%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 604 RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHV 663
           + I LKSSDGE FE++EAVA++SQTIKHMIEDDCAD+GIPLPNV   IL+KVIEYCKKHV
Sbjct: 6   KMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHV 65

Query: 664 ESPK----PEDRAGSVE-DDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 723
           E+       +D  GS E D+LK WDSEFVKVDQ TLFDLILAANYLNI  LLDLTC+ VA
Sbjct: 66  EAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVA 125

Query: 724 DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 757
           D ++GKTPE++R  FNIKND+TPEEE EVR EN+WAFE
Sbjct: 126 DQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

[Close]

BLAST of CmoCh12G003410 vs. ExPASy TrEMBL
Match: A0A6J1GGF9 (uncharacterized protein LOC111453974 OS=Cucurbita moschata OX=3662 GN=LOC111453974 PE=4 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 6.4e-212
Identity = 387/418 (92.58%), Postives = 396/418 (94.74%), Query Frame = 0


Query: 177 TFYLARIRQIHFNINSYTDFMAR---YASAFAKIEILKRLQRETFSDLMRLRDRQEKVEK 236
           TF + +++      +++ D + R    +S    IEILKRLQRETFSDLMRLRDRQEKVEK
Sbjct: 5   TFIVDKLKDFGTASHNFFDGLVRRRQQSSRRRPIEILKRLQRETFSDLMRLRDRQEKVEK 64

Query: 237 VLSFNNTQRSSPLQENGTHVRGEVDILGALLLMSVIDNHSLKTLRRAGISTGIHSRLTFE 296
           VLSFNNTQRSSPLQENGTHVRGEVDILGALLLMSVIDNHSLKTLRRAGISTGIHSRLTFE
Sbjct: 65  VLSFNNTQRSSPLQENGTHVRGEVDILGALLLMSVIDNHSLKTLRRAGISTGIHSRLTFE 124

Query: 297 TTVRENDSLVAEFVANQKAKVDFGVDSGSELTLSKVLYKASVRDWMSAIVAPIGARCRDV 356
           TTVRENDSLVAEFVANQKAKVDFGVDSGSELTLSKVLYKASVRDWMSAIVAPIGARCRDV
Sbjct: 125 TTVRENDSLVAEFVANQKAKVDFGVDSGSELTLSKVLYKASVRDWMSAIVAPIGARCRDV 184

Query: 357 AIIASPSRQEKGLTDISSFGPPLLDQPNGGAIGLTVRRSNVTASLAQFISTEEIQPSFGR 416
           AIIASPSRQEKGLTDISSFGPPLLDQPNGGAIGLTVRRSNVTASLAQFISTEEIQPSFGR
Sbjct: 185 AIIASPSRQEKGLTDISSFGPPLLDQPNGGAIGLTVRRSNVTASLAQFISTEEIQPSFGR 244

Query: 417 IQHCFNTFGQLVCQFSRGTKLSLLGLLQAPKLCNQHIDLGALTISVGLGSRHESSETAAT 476
           IQHCFNTFGQLVCQFSRGTKLSLLGLLQAPKLCNQHIDLGALTISVGLGSRHESSETAAT
Sbjct: 245 IQHCFNTFGQLVCQFSRGTKLSLLGLLQAPKLCNQHIDLGALTISVGLGSRHESSETAAT 304

Query: 477 PDSCLLTASRKAISRGSMALLLESELDEVIRLGGWVEVRQSNPNDVQWAVSMSDNNSEEA 536
           PDSCLLTASRKAISRGSMALLLESELDEVIRLGGWVEVRQSNPNDVQWAVSMSDNNSEEA
Sbjct: 305 PDSCLLTASRKAISRGSMALLLESELDEVIRLGGWVEVRQSNPNDVQWAVSMSDNNSEEA 364

Query: 537 LGWGMNLGGIHGGTSGTDHFQIESYIKLNMSKRFNVKPGIAYVTDGDAYMMALLTSPN 592
           LGWGMNLGGIHGGTSGTDHFQIESYIKLNMSKRFNVKPGIAYVTDGDAYMMALL   N
Sbjct: 365 LGWGMNLGGIHGGTSGTDHFQIESYIKLNMSKRFNVKPGIAYVTDGDAYMMALLVRSN 422

[Close]

BLAST of CmoCh12G003410 vs. ExPASy TrEMBL
Match: A0A6J1KTB8 (uncharacterized protein LOC111496222 OS=Cucurbita maxima OX=3661 GN=LOC111496222 PE=4 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 3.1e-206
Identity = 375/418 (89.71%), Postives = 390/418 (93.30%), Query Frame = 0


Query: 177 TFYLARIRQIHFNINSYTDFMAR---YASAFAKIEILKRLQRETFSDLMRLRDRQEKVEK 236
           TF + +++      +++ D + R    +S    IEILKRLQRETFSDLMRLRDRQEKVEK
Sbjct: 5   TFIVDKLKDFGTASHNFFDGLVRRRQQSSRRRPIEILKRLQRETFSDLMRLRDRQEKVEK 64

Query: 237 VLSFNNTQRSSPLQENGTHVRGEVDILGALLLMSVIDNHSLKTLRRAGISTGIHSRLTFE 296
           V SFNNTQRSSP QENGTHVRGEVDILGALLLMSVIDNHSLKTLR +GISTGIHSRLTFE
Sbjct: 65  VPSFNNTQRSSPFQENGTHVRGEVDILGALLLMSVIDNHSLKTLRSSGISTGIHSRLTFE 124

Query: 297 TTVRENDSLVAEFVANQKAKVDFGVDSGSELTLSKVLYKASVRDWMSAIVAPIGARCRDV 356
           TTVRENDSLVAEFVANQKAKVDFGVDSGSELTLSKVLYKASV DWMSAIVAPIGARCRDV
Sbjct: 125 TTVRENDSLVAEFVANQKAKVDFGVDSGSELTLSKVLYKASVSDWMSAIVAPIGARCRDV 184

Query: 357 AIIASPSRQEKGLTDISSFGPPLLDQPNGGAIGLTVRRSNVTASLAQFISTEEIQPSFGR 416
           AIIASPSR+EKGLTDISSFGPPLLDQPNGGAIGLTVRRSNVTASL QFISTEEIQPSFGR
Sbjct: 185 AIIASPSRREKGLTDISSFGPPLLDQPNGGAIGLTVRRSNVTASLVQFISTEEIQPSFGR 244

Query: 417 IQHCFNTFGQLVCQFSRGTKLSLLGLLQAPKLCNQHIDLGALTISVGLGSRHESSETAAT 476
           IQHCF+TFGQL+CQFSRGTKLSLLGLLQAPKLCNQH+DLGALTISVGLGSRHESSETA T
Sbjct: 245 IQHCFSTFGQLMCQFSRGTKLSLLGLLQAPKLCNQHVDLGALTISVGLGSRHESSETAET 304

Query: 477 PDSCLLTASRKAISRGSMALLLESELDEVIRLGGWVEVRQSNPNDVQWAVSMSDNNSEEA 536
           PDSCLLTASRKAISRGSMALLLESELDEVIRLGGWVEVRQSNPNDVQWAVSMSDNNSEEA
Sbjct: 305 PDSCLLTASRKAISRGSMALLLESELDEVIRLGGWVEVRQSNPNDVQWAVSMSDNNSEEA 364

Query: 537 LGWGMNLGGIHGGTSGTDHFQIESYIKLNMSKRFNVKPGIAYVTDGDAYMMALLTSPN 592
           LGWGMNLGGIHGGTSGTDHFQIESY+KLNMSKRFNVKPGIAYVTDGDAYMMALL   N
Sbjct: 365 LGWGMNLGGIHGGTSGTDHFQIESYVKLNMSKRFNVKPGIAYVTDGDAYMMALLVRSN 422

[Close]

BLAST of CmoCh12G003410 vs. ExPASy TrEMBL
Match: A0A1S3BBY0 (uncharacterized protein LOC103488388 OS=Cucumis melo OX=3656 GN=LOC103488388 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 3.5e-162
Identity = 304/386 (78.76%), Postives = 331/386 (85.75%), Query Frame = 0


Query: 207 IEILKRLQRETFSDLMRLRDRQEKVEKVLSFNNTQRSSPLQENGTHVRGEVDILGALLLM 266
           IEILKRLQRE FSDLMRLRDRQ+KVEKVLS  NTQRSSP QEN THV+GEV+ILGALL M
Sbjct: 38  IEILKRLQREAFSDLMRLRDRQDKVEKVLSLYNTQRSSPFQENATHVKGEVNILGALLFM 97

Query: 267 SVIDNHSLKTLRRAGISTGIHSRLTFETTVRENDSLVAEFVANQKAKVDFGVDSGSELTL 326
           SVIDNHS   L RAGISTGIHSRLTFETTVRE+DSLVAEFVANQKAKVDFGVDSGSELTL
Sbjct: 98  SVIDNHSFDALHRAGISTGIHSRLTFETTVRESDSLVAEFVANQKAKVDFGVDSGSELTL 157

Query: 327 SKVLYKASVRDWMSAIVAPIGARCRDVAIIASPSRQEKGLTDISSFGPPLLDQPNGGAIG 386
           SKVLYKA+V DWMSA V P+GARCRDVA+IA+PS QEKGLTD SSFGPPL DQPNGGAIG
Sbjct: 158 SKVLYKANVGDWMSATVVPVGARCRDVAVIANPSHQEKGLTDASSFGPPLFDQPNGGAIG 217

Query: 387 LTVRRSNVTASLAQFISTEEIQPSFGRIQHCFNTFGQLVCQFSRGTKLSLLGLLQAPKL- 446
           LTVR+SN+TASLAQFISTE IQPSF RIQH   TFGQLVCQ  RGTKLSLLGLLQ PKL 
Sbjct: 218 LTVRKSNLTASLAQFISTERIQPSFDRIQHHLGTFGQLVCQLPRGTKLSLLGLLQVPKLS 277

Query: 447 CNQHIDLGALTISVGLGSRHESSETAATPDSCLLTASRKAISRGSMALLLESELDEVIRL 506
            NQH++LGALTI V L SR +S ET   PD  LLT S +AISR S+ALLLESELDEV R+
Sbjct: 278 SNQHVNLGALTIPVCL-SRRKSPETVEGPDPRLLTVSGEAISRRSIALLLESELDEVTRI 337

Query: 507 GGWVEVRQSNPNDVQWAVSMSDNNSEEALGWGMNLGGIHGGTSGTDHFQIESYIKLNMSK 566
           GGWVE+ QSN   +QWAVSMSDNNSE+ALGWGM+L GI G +   DHFQ+ESY+KLN+SK
Sbjct: 338 GGWVELSQSNSKYLQWAVSMSDNNSEDALGWGMSLSGILGSSLDRDHFQVESYVKLNVSK 397

Query: 567 RFNVKPGIAYVTDGDAYMMALLTSPN 592
           +FN+KPGIAYVTDG+A MMA L   N
Sbjct: 398 KFNLKPGIAYVTDGNAKMMAFLVRSN 422

[Close]

BLAST of CmoCh12G003410 vs. ExPASy TrEMBL
Match: A0A6J1CSD9 (uncharacterized protein LOC111013892 OS=Momordica charantia OX=3673 GN=LOC111013892 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 3.1e-158
Identity = 298/385 (77.40%), Postives = 325/385 (84.42%), Query Frame = 0


Query: 207 IEILKRLQRETFSDLMRLRDRQEKVEKVLSFNNTQRSSPLQENGTHVRGEVDILGALLLM 266
           IEILKRLQRE FSDLMRLRDRQ+KVEK LSF  TQ+SSP QE+ THV+GEVD+LGALLLM
Sbjct: 38  IEILKRLQREAFSDLMRLRDRQDKVEKTLSFYGTQKSSPFQESATHVKGEVDLLGALLLM 97

Query: 267 SVIDNHSLKTLRRAGISTGIHSRLTFETTVRENDSLVAEFVANQKAKVDFGVDSGSELTL 326
           SVID +S   L RAGISTGIHSRLTFE TVRENDSLVAEFVANQKA VDFGV SGSELTL
Sbjct: 98  SVIDRNSCNALCRAGISTGIHSRLTFEATVRENDSLVAEFVANQKAIVDFGVHSGSELTL 157

Query: 327 SKVLYKASVRDWMSAIVAPIGARCRDVAIIASPSRQEKGLTDISSFGPPLLDQPNGGAIG 386
           SKV YKASV DWMSAI  P+GARCRDVA+IA+PS QEKGLTDISSFGPPLLDQP+GGAIG
Sbjct: 158 SKVFYKASVGDWMSAIAIPLGARCRDVAVIANPSHQEKGLTDISSFGPPLLDQPSGGAIG 217

Query: 387 LTVRRSNVTASLAQFISTEEIQPSFGRIQHCFNTFGQLVCQFSRGTKLSLLGLLQAPKLC 446
           LTVR+SNVTASLAQFISTE IQPSF RIQH  +TFGQLV Q  RGTKLSLLGLLQAPK  
Sbjct: 218 LTVRKSNVTASLAQFISTERIQPSFDRIQHYLSTFGQLVYQLPRGTKLSLLGLLQAPKF- 277

Query: 447 NQHIDLGALTISVGLGSRHESSETAATPDSCLLTASRKAISRGSMALLLESELDEVIRLG 506
            QH++LGALT+ V LGSRH S ET   PD    T SRKA+SRGS+ALLLESELDE+ R+G
Sbjct: 278 TQHVNLGALTLPVSLGSRHTSPETVEAPDPLSSTVSRKAMSRGSIALLLESELDELTRIG 337

Query: 507 GWVEVRQSNPNDVQWAVSMSDNNSEEALGWGMNLGGIHGGTSGTDHFQIESYIKLNMSKR 566
           GWVEV QSNP  +QWAVS+SD NSE+ALGWGM+L GI  G      FQ+ESY+KLNMSKR
Sbjct: 338 GWVEVSQSNPKHMQWAVSVSD-NSEDALGWGMSLSGITQGPLDRSQFQVESYVKLNMSKR 397

Query: 567 FNVKPGIAYVTDGDAYMMALLTSPN 592
           F++KPGIAYVTDGDA MMA L   N
Sbjct: 398 FSLKPGIAYVTDGDAKMMAFLVRSN 420

[Close]

BLAST of CmoCh12G003410 vs. ExPASy TrEMBL
Match: A0A0A0LQH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346070 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 5.3e-158
Identity = 300/383 (78.33%), Postives = 328/383 (85.64%), Query Frame = 0


Query: 207 IEILKRLQRETFSDLMRLRDRQEKVEKVLSFNNTQRSSPLQENGTHVRGEVDILGALLLM 266
           IEILKRLQRE FSDLMRLRDRQ+KVEKVLS  NTQRSSP QEN THV+GEV++LGALL M
Sbjct: 38  IEILKRLQREAFSDLMRLRDRQDKVEKVLSLYNTQRSSPFQENVTHVKGEVNVLGALLFM 97

Query: 267 SVIDNHSLKTLRRAGISTGIHSRLTFETTVRENDSLVAEFVANQKAKVDFGVDSGSELTL 326
           SVIDNHS K L RAGISTGIHSRLTFETTVRE+DSLVAEFVANQKAKVDFGVDSGSELTL
Sbjct: 98  SVIDNHSFKALHRAGISTGIHSRLTFETTVRESDSLVAEFVANQKAKVDFGVDSGSELTL 157

Query: 327 SKVLYKASVRDWMSAIVAPIGARCRDVAIIASPSRQEKGLTDISSFGPPLLDQPNGGAIG 386
           SKVLYKASV DWMSA V P+GARCRDV+IIA+PS QEKGLTD SSFGPPLLDQPNGGAIG
Sbjct: 158 SKVLYKASVGDWMSATVVPVGARCRDVSIIANPSHQEKGLTDASSFGPPLLDQPNGGAIG 217

Query: 387 LTVRRSNVTASLAQFISTEEIQPSFGRIQHCFNTFGQLVCQFSRGTKLSLLGLLQAPKL- 446
           LTVR+SN+TASLAQFISTE IQPSF RIQH   TFGQLVCQ  RG KLSLLGLLQ PKL 
Sbjct: 218 LTVRKSNLTASLAQFISTERIQPSFDRIQHHLGTFGQLVCQLPRGMKLSLLGLLQVPKLS 277

Query: 447 CNQHIDLGALTISVGLGSRHESSETAATPDSCLLTAS-RKAISRGSMALLLESELDEVIR 506
            NQH++LGALTI V L SR +S ET   PD  LLT S  +AISR S+ALLLESELDE  R
Sbjct: 278 SNQHVNLGALTIPVCL-SRRKSPETVDGPDPRLLTVSGEEAISRRSIALLLESELDEETR 337

Query: 507 LGGWVEVRQSNPNDVQWAVSMSDNNSEEALGWGMNLGGIHGGTSGTDHFQIESYIKLNMS 566
           + GWVE+ QSN   ++WAVS+SDNNSE+ALGWGM+L GI G     DHFQ+ESY+KLN+S
Sbjct: 338 IAGWVELSQSNSKYLRWAVSVSDNNSEDALGWGMSLSGILGSAIDRDHFQVESYVKLNVS 397

Query: 567 KRFNVKPGIAYVTDGDAYMMALL 588
           K+FN+KPGIAYVTDG+A MMA L
Sbjct: 398 KKFNLKPGIAYVTDGNAKMMAFL 419

[Close]

BLAST of CmoCh12G003410 vs. TAIR 10
Match: AT1G11320.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 46 Blast hits to 46 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 336.3 bits (861), Expect = 6.5e-92
Identity = 173/381 (45.41%), Postives = 236/381 (61.94%), Query Frame = 0


Query: 207 IEILKRLQRETFSDLMRLRDRQEKVEKVLSFNNTQRSSPLQENGTHVRGEVDILGALLLM 266
           I+ILKRLQRETFSDLM+LR+RQEKVE+++S     +  P QE  THVRGEVD+LGA+LLM
Sbjct: 38  IDILKRLQRETFSDLMKLRERQEKVERIISSQKLSKGGPFQETSTHVRGEVDVLGAILLM 97

Query: 267 SVIDNHSLKTLRRAGISTGIHSRLTFETTVRENDSLVAEFVANQKAKVDFGVDSGSELTL 326
              D  S   L + G+  G+ SR  FET++RE D LVAE VA            G EL+L
Sbjct: 98  GNTDEESFNGLNKEGVRPGLLSRFVFETSLRETDRLVAELVAGYNGAGSHRDFLGGELSL 157

Query: 327 SKVLYKASVRDWMSAIVAPIGARCRDVAIIASPSRQEKGLTDISSFGPPLLDQPNGGAIG 386
           +KV YKA + DW SAI  P+GA  RD+      S Q   LT++S  GPPLL Q NG AIG
Sbjct: 158 AKVFYKADINDWFSAIAIPVGAHFRDIEASTVSSYQGMSLTEVSELGPPLLSQHNGSAIG 217

Query: 387 LTVRRSNVTASLAQFISTEEIQPSFGRIQHCFNTFGQLVCQFSRGTKLSLLGLLQAPKLC 446
           LT R+SN+TASLAQ +S  E++        CF TFGQ+ C   R  KLSLLG  Q     
Sbjct: 218 LTFRKSNITASLAQSMSNVEVEQGLTAPNRCFRTFGQVTCHILRSLKLSLLGCHQVLTSS 277

Query: 447 NQHIDLGALTISVGLGSRHESSETAATPDSCLLTASRKAISRGSMALLLESELDEVIRLG 506
           +    +GA+T+ V    RH ++E   +     ++ +   +S  S+AL L+S +DE  +LG
Sbjct: 278 SNLHSVGAITVPVSFLRRHTATEPEPSAPPLEMSRNMNHVSSSSIALKLDSLMDESTKLG 337

Query: 507 GWVEVRQSNPNDVQWAVSMSDNNSEEALGWGMNLGGIHGGTSGTDHFQIESYIKLNMSKR 566
           GW+E++ S    V+W+VS++D N E+ +GWGM++GG+  G+   D FQ+ESY+K N+  R
Sbjct: 338 GWIEIQNSREKQVKWSVSITD-NPEDEVGWGMSVGGVVDGSRNHDQFQVESYLKFNIGDR 397

Query: 567 FNVKPGIAYVTDGDAYMMALL 588
           F + P + Y T+ D   + L+
Sbjct: 398 FRLSPCLVYHTNSDGRTIGLM 417

[Close]

BLAST of CmoCh12G003410 vs. TAIR 10
Match: AT5G42190.1 (E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein )

HSP 1 Score: 262.7 bits (670), Expect = 9.1e-70
Identity = 135/171 (78.95%), Postives = 146/171 (85.38%), Query Frame = 0


Query: 600 MSSGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYC 659
           MS+ RKITLKSSDGE FE+DEAVALESQTIKHMIEDDC D+GIPLPNV SKILSKVIEYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 660 KKHVESPKPED--------------RAGSVEDDLKTWDSEFVKVDQATLFDLILAANYLN 719
           K+HVE+ +  +               +GS ++DLKTWDSEF+KVDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 720 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 757
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]

BLAST of CmoCh12G003410 vs. TAIR 10
Match: AT1G75950.1 (S phase kinase-associated protein 1 )

HSP 1 Score: 248.4 bits (633), Expect = 1.8e-65
Identity = 123/159 (77.36%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 602 SGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKK 661
           S +KI LKSSDGE FEV+EAVALESQTI HM+EDDC D+G+PLPNV SKIL+KVIEYCK+
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 662 HVESPKPE----DRAGSVEDDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTV 721
           HVE+   +    + A + +DDLK WD++F+K+DQATLF+LILAANYLNIK+LLDLTCQTV
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121

Query: 722 ADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 757
           ADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]

BLAST of CmoCh12G003410 vs. TAIR 10
Match: AT1G20140.1 (SKP1-like 4 )

HSP 1 Score: 221.9 bits (564), Expect = 1.8e-57
Identity = 114/158 (72.15%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 604 RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHV 663
           + I LKSSDGE FE++EAVA++SQTIKHMIEDDCAD+GIPLPNV   IL+KVIEYCKKHV
Sbjct: 6   KMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHV 65

Query: 664 ESPK----PEDRAGSVE-DDLKTWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 723
           E+       +D  GS E D+LK WDSEFVKVDQ TLFDLILAANYLNI  LLDLTC+ VA
Sbjct: 66  EAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVA 125

Query: 724 DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 757
           D ++GKTPE++R  FNIKND+TPEEE EVR EN+WAFE
Sbjct: 126 DQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

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BLAST of CmoCh12G003410 vs. TAIR 10
Match: AT5G42170.1 (SGNH hydrolase-type esterase superfamily protein )

HSP 1 Score: 216.9 bits (551), Expect = 5.8e-56
Identity = 100/183 (54.64%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 22  TINIPPGYSVPAVFVFGDSVVDTGNNNNLITQAKCNYPPYGRDFLGQQATGRFSNGRVPS 81
           TI +PP  ++P +  FGDS+VD+GNNN+L T  KCN+PPYG+DF G+ ATGRFS+GRVPS
Sbjct: 39  TIKLPPNVTIPGIITFGDSIVDSGNNNHLRTALKCNFPPYGKDFPGKIATGRFSDGRVPS 98

Query: 82  DLLVDALGIKEFLPPYANPSLRPEDLITGVNFASGGAGFDPLTSRLAPAISLEDQLGMFR 141
           D++ + LGI E +P Y NP L+ EDL+ GVNFASGG+G+DPLT++L   +SL DQL  F+
Sbjct: 99  DIVAERLGIAETIPAYLNPKLKNEDLLKGVNFASGGSGYDPLTAKLVKVVSLSDQLKNFQ 158

Query: 142 EYSKKLEELVGVARAKFIIANGLFMVVAGSNDIANTFYLARIRQIHFNINSYTDFMARYA 201
           EY  KL+ +VG  +A F++ N L++VVA SNDIA+T+     R I +N  SY D++A  A
Sbjct: 159 EYKNKLKVIVGEEKANFLVKNSLYLVVASSNDIAHTY---TARSIKYNKTSYADYLADSA 218

Query: 202 SAF 205
           S F
Sbjct: 219 SKF 218

The following BLAST results are available for this feature:

BLAST of CmoCh12G003410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHW7	1.3e-68	78.95	SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1	[more]
Q6PL11	1.9e-64	78.31	SKP1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP1 PE=1 SV=1	[more]
Q39255	2.5e-64	77.36	SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1	[more]
Q651E8	5.2e-62	75.15	SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1	[more]
Q9LNT9	2.5e-56	72.15	SKP1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=ASK4 PE=1 SV=1	[more]

BLAST of CmoCh12G003410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGF9	6.4e-212	92.58	uncharacterized protein LOC111453974 OS=Cucurbita moschata OX=3662 GN=LOC1114539...	[more]
A0A6J1KTB8	3.1e-206	89.71	uncharacterized protein LOC111496222 OS=Cucurbita maxima OX=3661 GN=LOC111496222...	[more]
A0A1S3BBY0	3.5e-162	78.76	uncharacterized protein LOC103488388 OS=Cucumis melo OX=3656 GN=LOC103488388 PE=...	[more]
A0A6J1CSD9	3.1e-158	77.40	uncharacterized protein LOC111013892 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0LQH7	5.3e-158	78.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346070 PE=4 SV=1	[more]

BLAST of CmoCh12G003410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11320.1	6.5e-92	45.41	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G42190.1	9.1e-70	78.95	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein	[more]
AT1G75950.1	1.8e-65	77.36	S phase kinase-associated protein 1	[more]
AT1G20140.1	1.8e-57	72.15	SKP1-like 4	[more]
AT5G42170.1	5.8e-56	54.64	SGNH hydrolase-type esterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 603..706 e-value: 2.4E-55 score: 199.8
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 605..663 e-value: 4.9E-30 score: 103.5
IPR036514	SGNH hydrolase superfamily	GENE3D	3.40.50.1110	SGNH hydrolase	coord: 28..217 e-value: 3.2E-30 score: 107.6
IPR001087	GDSL lipase/esterase	PFAM	PF00657	Lipase_GDSL	coord: 34..204 e-value: 1.5E-9 score: 38.6
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 707..754 e-value: 2.1E-29 score: 101.3
IPR011333	SKP1/BTB/POZ domain superfamily	GENE3D	3.30.710.10	Potassium Channel Kv1.1; Chain A	coord: 600..756 e-value: 2.8E-75 score: 253.9
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 604..666
None	No IPR available	PANTHER	PTHR35097:SF1	GDSL ESTERASE/LIPASE	coord: 205..588
None	No IPR available	PANTHER	PTHR35097	GDSL ESTERASE/LIPASE	coord: 205..588
None	No IPR available	CDD	cd18322	BTB_POZ_SKP1	coord: 605..721 e-value: 3.62428E-66 score: 212.837
IPR008265	Lipase, GDSL, active site	PROSITE	PS01098	LIPASE_GDSL_SER	coord: 34..45
IPR036296	SKP1-like, dimerisation domain superfamily	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 679..754

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G003410.1	CmoCh12G003410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0016298	lipase activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds