CmoCh12G001020 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G001020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	nudix hydrolase 16, mitochondrial-like
Location	Cmo_Chr12: 555452 .. 558725 (-)
RNA-Seq Expression	CmoCh12G001020
Synteny	CmoCh12G001020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTTACCCTTGCCCGTTGATCTCAACGGTCATCTTCTCCTCCATATATAATCTCCCTTGGTTCTTAACCCACCGGATTCTCCCGCAAACTCCCCTCTGGACCCACTGGTTTTCTTTTCACCATCAATCCTAATCTCTCCCCTGTTTTGACCCGACCCCACCGCTAGATCCGCTTCAGCCGCAACCTTCCATCTCCATCTCTGTTTCTCTCTTTCTTCCAACCTTCCAACCCTAACCATCAATCGTCATTCATCGCCACTCTTCAATGGAGTTTCAGATTGCCTTCAACCGTCCATTCTGAGAGAAAAATGGACAATGTTGAAATTTCTCCCCTGCTTTAGGGATGTGCAGGATTTTGCATTCGCATTCGCATTCGTCTCTGAGTTTTGATCCCGCTGAACGATAGTTTATATACATATATTTATATGCATGTCTGATTTGGTGGCCCGCACCGGACGGCAGCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTATATTCCCACCATTATTTTTTAAGATTCGTAGACTCCAGCTATTTAATGTTTGTATGTTTGTGTCCTTCCTTGCTTCCAAGTCGTTTTCGTTGACCATCTTTGTCGAAGTTTTGTGAAAAATGAGGCCGCCATTGTCATTTTTTTTTACCACGTAATAGATATTGACTGCTTTGGTTTTCACTGTTGTTCTTGTTTCGGTATTGGTGTTTTTTTGATTCGTTGGTCGGTTCTTTAATCGATTAGGAACTCTATGGTTGTTTTCGGTTTAAACTACATTCCTACAGGTCTGCATAAATTTGAGTTCTTCTTTATTTTTAATGATCTGTGTATCGAGACCTGAGTGCTGAAGTTCTGCCAGATTATTGATTTGTGGTTGGGTATCCAGAATGTAATCTGTCACGAAAGTACTTTGGTGACACATTGCATTAATGAATCCGTCTTAGTAGGATTTAGGTCAGTTTCAGGAAGGAAAGGGGAAACTAATTTGATCGTGAATCTATTTATTCTTTCGCTCTGCTGATCTTACCTCATTCACCTCGGTAAAGCAGCTTGATCGATAGGGAGAGATGGCCGATCTTTCTTTTCTTACTCAGGGTGCTTCATCTCCTTTGCAGCGTGGTTAATTGTGGTGAATGGATGGACAGATGATGGTTGGGTTGGCACCATCTGGAAAGATGATGTCCTTTTGTCTGTCATAACTAGCAGCGACAGATTATGATAGCAGATTCATGACTTTTGATATTAGTGCATTGGCTTTGGCTGAAGTCAATCACATCCTTGATGACTTGATGGAAAGTTGGCCATCTATATTCCTTCCATAAAGCTATCAATAATTTCTTCCCTCTTCATCCAGTCTTGATGATTCAAGCGACGTGAGAAAAAGATACGACTAAATCTGCATAAATGGAATAACATCATGATCTTTGAGCACACTCAGTTGCATCATTCTCTTTTATACTTCTTTCAATGACTTCTTGTAGTTAATAAGAGATGGCTCATTTTAAATTTATCTCTATGGCCCTTCTGCATTGCATTTTATACATCCGGGCTGCTTGTGTTTTATGTTTTATTTAAACGAATGAAATGCAGTTGAATCAAATGATTGATCAATCAATGTGGTGGCAGATATAGTTTATGAATGCCTTTCTATTCTTTTGTAGGTGTATTCCTTTTAGGTATAGAAGTTCCGAAGGGAGTAGTGATGAAGTTTCGGATAAAGTCGTGGAGGTGCTTATGATTGACACGCCTAGTGGCCCGGGTCTTTTGTTCCCGAAGGTGTGAAGTTGTTTCCCTCTCATTTCTGCTTCTCTCATATGAAGAAAGTATATGAGCTTATTTTATCTCTAACCATCAGCATTTTCTCTAAAAGGGAGGCTGGGAGAATGACGAGACGGTGGAGGAGGCTGCTGTAAGGGAAGCTATCGAAGAGGCCGGAGTTCGTGGTGAACTTATGGTGAAATAGTACTTTAAATGCTTGAATTGTTTTTTCTCATTTCCTTTTGTGAAAATTGAAGGTTGTTTCATCTAACGTATATATATGATTGGAAGAGGAATGCTGAGGAGTGTTGAGGGGTGTATCATTTTTAGTAGCTTTCTGTAGGACTACGCAATGAAGTGGACGGTCCAGGCGGAGGATCTCTTGAGCCTCTATTACCGTGGCTGGTAGATATGCATGAATGCACACTTCGGAGAGACTAGGGAGAGCTCTTGAGCCTCTTATCTCTTGAGTCATGTTGTTTTGATGTTATATCTGCATTAATTTGTCGTTGGTTAACATATGTGAGATCCCACATTGGTTGGTTGGAGAGGGGAACGAAGCATTCTTATAAGGGTGTTGAAACCTCTCCCTAGCCGTGAGGCTGATGGCAATATGTAACGGGCCAAAGCAGACAATATCGGTTAGCGATGGGTTGTTACAAATGGTATTAGAGCTAGACACCGAGTGGTGTGCCAGTGAGGATGCTGGTCCCGAAGGAGTTGGGTTGTGAGATCCTACATCGATTGGAGAGGAGAATGAACATTCCTTATAAGGGTATGGAAACCTCTTCCTAGCATTTTAAAACTGTGAGGCTGACCTTGATACCTAACGGGACAAAGTGGGTAATATTTGCTAGCGGCTGGTGTAGGATGTTATTGAATGTTGCATTTTTTGATAGAATAGTTTACTGCCTTTCTTGTTTATGTCCGTATGTTCGTTTGTTTATCCTCTCGGAGACCGACACGAAGAAGTGGCGTGTAAAATCTGTTGGCTTTGTTCAGGGGTTCTTAGGAATCTATCACTTCAAGAGTAAAACACAGCAAGATGAGTTCAGTCCAGAAGGATTGTGTAGAGCAGCAATGTATGCTTTGTTTGTGAATGAGGAGCTTGAGTCATGGCCGGAGCAGAACACAAGAAACAGAAGCTGGGTGACCATTCCTGAGGCCATTGAAAGCTGCAGGCACGCGTGGATGAGAGATGCCCTTGTCATTGGTTTCAACAAATGGCATGCACAACATATGAACGATGAATCTTGACATCATCCAACCCAACCCGACCCAGCCACATGTAAGCACATTTCCTTTCAACTACGCTGCAATATTATGAATCTTTGAGGAACTAACACTGATTTCTTTCAAGATTTTTATTTATATACAGGCAGGCAATGTTTTGGTTGCTCATTTATTATAATTTCTGTACTACTGACCCCTTCAATTTGGAGGGCATTCAATATTATTTTTATATAAGCACCACTTCCAGCTTCCTTGAATTGAAGCTTTTGAAGCTTTTACA

mRNA sequence

CATTTTACCCTTGCCCGTTGATCTCAACGGTCATCTTCTCCTCCATATATAATCTCCCTTGGTTCTTAACCCACCGGATTCTCCCGCAAACTCCCCTCTGGACCCACTGGTTTTCTTTTCACCATCAATCCTAATCTCTCCCCTGTTTTGACCCGACCCCACCGCTAGATCCGCTTCAGCCGCAACCTTCCATCTCCATCTCTGTTTCTCTCTTTCTTCCAACCTTCCAACCCTAACCATCAATCGTCATTCATCGCCACTCTTCAATGGAGTTTCAGATTGCCTTCAACCGTCCATTCTGAGAGAAAAATGGACAATGTTGAAATTTCTCCCCTGCTTTAGGGATGTGCAGGATTTTGCATTCGCATTCGCATTCGTCTCTGAGTTTTGATCCCGCTGAACGATAGTTTATATACATATATTTATATGCATGTCTGATTTGGTGGCCCGCACCGGACGGCAGCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTATAGAAGTTCCGAAGGGAGTAGTGATGAAGTTTCGGATAAAGTCGTGGAGGTGCTTATGATTGACACGCCTAGTGGCCCGGGTCTTTTGTTCCCGAAGGGAGGCTGGGAGAATGACGAGACGGTGGAGGAGGCTGCTGTAAGGGAAGCTATCGAAGAGGCCGGAGTTCGTGGACTACGCAATGAAGTGGACGGTCCAGGCGGAGGATCTCTTGAGCCTCTATTACCGTGGCTGGGGTTCTTAGGAATCTATCACTTCAAGAGTAAAACACAGCAAGATGAGTTCAGTCCAGAAGGATTGTGTAGAGCAGCAATGTATGCTTTGTTTGTGAATGAGGAGCTTGAGTCATGGCCGGAGCAGAACACAAGAAACAGAAGCTGGGTGACCATTCCTGAGGCCATTGAAAGCTGCAGGCACGCGTGGATGAGAGATGCCCTTGTCATTGGTTTCAACAAATGGCATGCACAACATATGAACGATGAATCTTGACATCATCCAACCCAACCCGACCCAGCCACATGTAAGCACATTTCCTTTCAACTACGCTGCAATATTATGAATCTTTGAGGAACTAACACTGATTTCTTTCAAGATTTTTATTTATATACAGGCAGGCAATGTTTTGGTTGCTCATTTATTATAATTTCTGTACTACTGACCCCTTCAATTTGGAGGGCATTCAATATTATTTTTATATAAGCACCACTTCCAGCTTCCTTGAATTGAAGCTTTTGAAGCTTTTACA

Coding sequence (CDS)

ATGTCTGATTTGGTGGCCCGCACCGGACGGCAGCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTATAGAAGTTCCGAAGGGAGTAGTGATGAAGTTTCGGATAAAGTCGTGGAGGTGCTTATGATTGACACGCCTAGTGGCCCGGGTCTTTTGTTCCCGAAGGGAGGCTGGGAGAATGACGAGACGGTGGAGGAGGCTGCTGTAAGGGAAGCTATCGAAGAGGCCGGAGTTCGTGGACTACGCAATGAAGTGGACGGTCCAGGCGGAGGATCTCTTGAGCCTCTATTACCGTGGCTGGGGTTCTTAGGAATCTATCACTTCAAGAGTAAAACACAGCAAGATGAGTTCAGTCCAGAAGGATTGTGTAGAGCAGCAATGTATGCTTTGTTTGTGAATGAGGAGCTTGAGTCATGGCCGGAGCAGAACACAAGAAACAGAAGCTGGGTGACCATTCCTGAGGCCATTGAAAGCTGCAGGCACGCGTGGATGAGAGATGCCCTTGTCATTGGTTTCAACAAATGGCATGCACAACATATGAACGATGAATCTTGA

Protein sequence

MSDLVARTGRQQQRYDAGCRLIAGYRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES

Homology

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BLAST of CmoCh12G001020 vs. ExPASy Swiss-Prot
Match: Q9LHK1 (Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT16 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.0e-59
Identity = 114/187 (60.96%), Postives = 133/187 (71.12%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           M DLVARTGR QQRY+ G RL+AG     Y +S+   +  S KV++VLMI + SGPGLLF
Sbjct: 1   MCDLVARTGRLQQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETV EAA REA+EEAGVRG+                  + FLG Y FKSK+ 
Sbjct: 61  PKGGWENDETVREAAAREAVEEAGVRGI-----------------LMDFLGNYEFKSKSH 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSPEGLC+AAMYAL+V EEL +WPE  TR R W+TI EA+ESCRH WM+DALV GF 
Sbjct: 121 QDEFSPEGLCKAAMYALYVKEELATWPEHETRTRKWLTIEEAVESCRHPWMKDALVEGFC 170

Query: 181 KWHAQHM 183
           KWH + M
Sbjct: 181 KWHKEKM 170

[Close]

BLAST of CmoCh12G001020 vs. ExPASy Swiss-Prot
Match: Q93ZY7 (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT12 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.1e-35
Identity = 83/178 (46.63%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG---YRSSEGSSDEVSDKV-----VEVLMIDTPSGPG 60
           MS L +RTGR +QRYD   RL++G   YR  +    E    V     +EVLM+ +P+   
Sbjct: 1   MSVLSSRTGRDRQRYDNNFRLVSGCIPYRLMKADETEEDSGVDFVNKLEVLMVSSPNRHD 60

Query: 61  LLFPKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKS 120
           L+FPKGGWE+DETV EAA REAIEEAGV+G+  E            LP    LG++ F+S
Sbjct: 61  LVFPKGGWEDDETVLEAASREAIEEAGVKGILRE------------LP----LGVWEFRS 120

Query: 121 KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
           K+   E    G C+  M+AL V EELE WPE+  R R W+T+ EA+E CR+ WM+ AL
Sbjct: 121 KSSTVEDECLGGCKGYMFALKVTEELEDWPERKNRERRWLTVKEALELCRYEWMQRAL 162

[Close]

BLAST of CmoCh12G001020 vs. ExPASy Swiss-Prot
Match: Q52K88 (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.8e-33
Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG---YR----SSEGSSDEVSDKVVEVLMIDTPSGPGL 60
           MS+L ARTGR  QRYD   RL++G   YR      E S+    +  ++VLMI +P+   L
Sbjct: 1   MSNLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDL 60

Query: 61  LFPKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSK 120
           +FPKGGWE+DETV EAA REA+EEAGV+G+  E         +P       LG++ F+SK
Sbjct: 61  VFPKGGWEDDETVLEAASREAMEEAGVKGILRE---------DP-------LGVWEFRSK 120

Query: 121 TQQDEFS--PEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
           +   E      G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR+ WM+ AL
Sbjct: 121 SSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSAL 163

[Close]

BLAST of CmoCh12G001020 vs. ExPASy Swiss-Prot
Match: Q9LE73 (Nudix hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=NUDT4 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.3e-29
Identity = 74/171 (43.27%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 4   LVARTGRQQQRYD-AGCRLIAG---YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGG 63
           LV+RTGR  QRYD AG R + G   YR  +   + V  +V++VL++    G G+LFPKGG
Sbjct: 43  LVSRTGRDLQRYDHAGYRQVVGCVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGG 102

Query: 64  WENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEF 123
           WE DE++EEAA+RE IEEAGV G   E                  LG + +KSK  +   
Sbjct: 103 WETDESMEEAALRETIEEAGVTGELEEK-----------------LGKWQYKSK--RHSI 162

Query: 124 SPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
             +G     M+AL V++E E WPE   R R WV++ EA E C++ WMR+AL
Sbjct: 163 IHDGY----MFALLVSQEFERWPEAEMRQRRWVSLDEAREVCQNWWMREAL 190

[Close]

BLAST of CmoCh12G001020 vs. ExPASy Swiss-Prot
Match: Q9ZU95 (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT17 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 75/170 (44.12%), Postives = 102/170 (60.00%), Query Frame = 0


Query: 4   LVARTGRQQQRYDAGCRLIAG---YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGGW 63
           L +RTGRQ QRY+ G R + G   YR    +  ++SD+ VEVL+I +  G  L+FPKGGW
Sbjct: 9   LASRTGRQFQRYNKGRRQVVGCVPYRFKLSNDGKISDE-VEVLVISSQKGHALMFPKGGW 68

Query: 64  ENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEFS 123
           E DE+VEEAA RE +EEAGV            G++E        LG + F SK++   + 
Sbjct: 69  ELDESVEEAASRECLEEAGVL-----------GNVEHQ------LGKWDFLSKSRGTYY- 128

Query: 124 PEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
            EGL    M+ + V E+LE WPEQ+ R R W+ + EA E+CR  WM++AL
Sbjct: 129 -EGL----MFPMLVTEQLELWPEQHVRQRIWMNVTEAREACRDWWMKEAL 154

[Close]

BLAST of CmoCh12G001020 vs. ExPASy TrEMBL
Match: A0A6J1KKB0 (nudix hydrolase 16, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496053 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87
Identity = 166/191 (86.91%), Postives = 167/191 (87.43%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           MSDLVARTGRQQQRYDAGCRLIAG     YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF
Sbjct: 1   MSDLVARTGRQQQRYDAGCRLIAGCIPFRYRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETVEEAAVREAIEEAGVRG                   +GFLGIYHFKSKTQ
Sbjct: 61  PKGGWENDETVEEAAVREAIEEAGVRG-----------------ELMGFLGIYHFKSKTQ 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN
Sbjct: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 174

Query: 181 KWHAQHMNDES 187
           KWHAQHMNDES
Sbjct: 181 KWHAQHMNDES 174

[Close]

BLAST of CmoCh12G001020 vs. ExPASy TrEMBL
Match: A0A6J1GGN9 (nudix hydrolase 16, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454035 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87
Identity = 166/191 (86.91%), Postives = 167/191 (87.43%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           MSDLVARTGRQQQRYDAGCRLIAG     YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF
Sbjct: 1   MSDLVARTGRQQQRYDAGCRLIAGCIPFRYRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETVEEAAVREAIEEAGVRG                   +GFLGIYHFKSKTQ
Sbjct: 61  PKGGWENDETVEEAAVREAIEEAGVRG-----------------ELMGFLGIYHFKSKTQ 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN
Sbjct: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 174

Query: 181 KWHAQHMNDES 187
           KWHAQHMNDES
Sbjct: 181 KWHAQHMNDES 174

[Close]

BLAST of CmoCh12G001020 vs. ExPASy TrEMBL
Match: A0A6J1HB74 (nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462424 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 154/190 (81.05%), Postives = 163/190 (85.79%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           MSDLVARTGR QQRYDAGCRLIAG     YRSS+GSSDE+SDKVVEVLMIDTPSGPGLLF
Sbjct: 1   MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETVEEAAVREAIEEAGVRG                   +GFLG YHFKSKTQ
Sbjct: 61  PKGGWENDETVEEAAVREAIEEAGVRG-----------------QLMGFLGDYHFKSKTQ 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEF+P+GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIE+CRHAWMRDALV GFN
Sbjct: 121 QDEFTPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIENCRHAWMRDALVNGFN 173

Query: 181 KWHAQHMNDE 186
           KWHA++M+DE
Sbjct: 181 KWHAENMSDE 173

[Close]

BLAST of CmoCh12G001020 vs. ExPASy TrEMBL
Match: A0A6J1K726 (nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492230 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.9e-81
Identity = 153/190 (80.53%), Postives = 163/190 (85.79%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           MSDLVARTGR QQRYDAGCRL+AG     YRSS+GSSDEVSDKVVEVLMIDTPSGPGLLF
Sbjct: 1   MSDLVARTGRHQQRYDAGCRLVAGCIPFRYRSSDGSSDEVSDKVVEVLMIDTPSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETVEEAAVREAIEEAGVRG                   +GFLG YHFKSKTQ
Sbjct: 61  PKGGWENDETVEEAAVREAIEEAGVRG-----------------QLMGFLGDYHFKSKTQ 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEF+P+GLCRAAMYALFVNEELESWPEQ+TRNRSWVTIPEAIE+CRHAWMRDALV GFN
Sbjct: 121 QDEFTPDGLCRAAMYALFVNEELESWPEQDTRNRSWVTIPEAIENCRHAWMRDALVNGFN 173

Query: 181 KWHAQHMNDE 186
           KWHA++M+DE
Sbjct: 181 KWHAENMSDE 173

[Close]

BLAST of CmoCh12G001020 vs. ExPASy TrEMBL
Match: A0A5A7VFY1 (Nudix hydrolase 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001020 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 9.2e-80
Identity = 151/190 (79.47%), Postives = 159/190 (83.68%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           MSDLVARTGR QQRYDAGCRLIAG     YRSS+GSSDE+SDKVVEVLMIDTPSGPGLLF
Sbjct: 1   MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETVEEAAVREAIEEAGVRG                   +GFLG YHFKSKTQ
Sbjct: 61  PKGGWENDETVEEAAVREAIEEAGVRG-----------------ELMGFLGDYHFKSKTQ 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSP+GLCRAAMYAL V EELE WPEQNTRNRSWVTIPEAIE CRHAWMRDAL IGFN
Sbjct: 121 QDEFSPDGLCRAAMYALLVTEELECWPEQNTRNRSWVTIPEAIEKCRHAWMRDALAIGFN 173

Query: 181 KWHAQHMNDE 186
           KWHA++++DE
Sbjct: 181 KWHAENISDE 173

[Close]

BLAST of CmoCh12G001020 vs. TAIR 10
Match: AT3G12600.1 (nudix hydrolase homolog 16 )

HSP 1 Score: 231.1 bits (588), Expect = 7.3e-61
Identity = 114/187 (60.96%), Postives = 133/187 (71.12%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60
           M DLVARTGR QQRY+ G RL+AG     Y +S+   +  S KV++VLMI + SGPGLLF
Sbjct: 1   MCDLVARTGRLQQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLF 60

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQ 120
           PKGGWENDETV EAA REA+EEAGVRG+                  + FLG Y FKSK+ 
Sbjct: 61  PKGGWENDETVREAAAREAVEEAGVRGI-----------------LMDFLGNYEFKSKSH 120

Query: 121 QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFN 180
           QDEFSPEGLC+AAMYAL+V EEL +WPE  TR R W+TI EA+ESCRH WM+DALV GF 
Sbjct: 121 QDEFSPEGLCKAAMYALYVKEELATWPEHETRTRKWLTIEEAVESCRHPWMKDALVEGFC 170

Query: 181 KWHAQHM 183
           KWH + M
Sbjct: 181 KWHKEKM 170

[Close]

BLAST of CmoCh12G001020 vs. TAIR 10
Match: AT3G12600.2 (nudix hydrolase homolog 16 )

HSP 1 Score: 214.2 bits (544), Expect = 9.2e-56
Identity = 104/176 (59.09%), Postives = 124/176 (70.45%), Query Frame = 0


Query: 12  QQRYDAGCRLIAG-----YRSSEGSSDEVSDKVVEVLMIDTPSGPGLLFPKGGWENDETV 71
           +QRY+ G RL+AG     Y +S+   +  S KV++VLMI + SGPGLLFPKGGWENDETV
Sbjct: 3   EQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLFPKGGWENDETV 62

Query: 72  EEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSKTQQDEFSPEGLCR 131
            EAA REA+EEAGVRG+                  + FLG Y FKSK+ QDEFSPEGLC+
Sbjct: 63  REAAAREAVEEAGVRGI-----------------LMDFLGNYEFKSKSHQDEFSPEGLCK 122

Query: 132 AAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHM 183
           AAMYAL+V EEL +WPE  TR R W+TI EA+ESCRH WM+DALV GF KWH + M
Sbjct: 123 AAMYALYVKEELATWPEHETRTRKWLTIEEAVESCRHPWMKDALVEGFCKWHKEKM 161

[Close]

BLAST of CmoCh12G001020 vs. TAIR 10
Match: AT1G12880.1 (nudix hydrolase homolog 12 )

HSP 1 Score: 149.1 bits (375), Expect = 3.6e-36
Identity = 83/178 (46.63%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG---YRSSEGSSDEVSDKV-----VEVLMIDTPSGPG 60
           MS L +RTGR +QRYD   RL++G   YR  +    E    V     +EVLM+ +P+   
Sbjct: 1   MSVLSSRTGRDRQRYDNNFRLVSGCIPYRLMKADETEEDSGVDFVNKLEVLMVSSPNRHD 60

Query: 61  LLFPKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKS 120
           L+FPKGGWE+DETV EAA REAIEEAGV+G+  E            LP    LG++ F+S
Sbjct: 61  LVFPKGGWEDDETVLEAASREAIEEAGVKGILRE------------LP----LGVWEFRS 120

Query: 121 KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
           K+   E    G C+  M+AL V EELE WPE+  R R W+T+ EA+E CR+ WM+ AL
Sbjct: 121 KSSTVEDECLGGCKGYMFALKVTEELEDWPERKNRERRWLTVKEALELCRYEWMQRAL 162

[Close]

BLAST of CmoCh12G001020 vs. TAIR 10
Match: AT3G26690.1 (nudix hydrolase homolog 13 )

HSP 1 Score: 142.5 bits (358), Expect = 3.4e-34
Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG---YR----SSEGSSDEVSDKVVEVLMIDTPSGPGL 60
           MS+L ARTGR  QRYD   RL++G   YR      E S+    +  ++VLMI +P+   L
Sbjct: 1   MSNLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDL 60

Query: 61  LFPKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSK 120
           +FPKGGWE+DETV EAA REA+EEAGV+G+  E         +P       LG++ F+SK
Sbjct: 61  VFPKGGWEDDETVLEAASREAMEEAGVKGILRE---------DP-------LGVWEFRSK 120

Query: 121 TQQDEFS--PEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
           +   E      G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR+ WM+ AL
Sbjct: 121 SSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSAL 163

[Close]

BLAST of CmoCh12G001020 vs. TAIR 10
Match: AT3G26690.2 (nudix hydrolase homolog 13 )

HSP 1 Score: 142.5 bits (358), Expect = 3.4e-34
Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 1   MSDLVARTGRQQQRYDAGCRLIAG---YR----SSEGSSDEVSDKVVEVLMIDTPSGPGL 60
           MS+L ARTGR  QRYD   RL++G   YR      E S+    +  ++VLMI +P+   L
Sbjct: 1   MSNLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDL 60

Query: 61  LFPKGGWENDETVEEAAVREAIEEAGVRGLRNEVDGPGGGSLEPLLPWLGFLGIYHFKSK 120
           +FPKGGWE+DETV EAA REA+EEAGV+G+  E         +P       LG++ F+SK
Sbjct: 61  VFPKGGWEDDETVLEAASREAMEEAGVKGILRE---------DP-------LGVWEFRSK 120

Query: 121 TQQDEFS--PEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL 171
           +   E      G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR+ WM+ AL
Sbjct: 121 SSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSAL 163

The following BLAST results are available for this feature:

BLAST of CmoCh12G001020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHK1	1.0e-59	60.96	Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT16 PE=2...	[more]
Q93ZY7	5.1e-35	46.63	Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT12 PE=2...	[more]
Q52K88	4.8e-33	45.25	Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1...	[more]
Q9LE73	9.3e-29	43.27	Nudix hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=NUDT4 PE=1 SV=1	[more]
Q9ZU95	1.3e-27	44.12	Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT17 PE=2...	[more]

BLAST of CmoCh12G001020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KKB0	1.2e-87	86.91	nudix hydrolase 16, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC1114960...	[more]
A0A6J1GGN9	1.2e-87	86.91	nudix hydrolase 16, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1HB74	1.3e-81	81.05	nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1K726	4.9e-81	80.53	nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A5A7VFY1	9.2e-80	79.47	Nudix hydrolase 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00...	[more]

BLAST of CmoCh12G001020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12600.1	7.3e-61	60.96	nudix hydrolase homolog 16	[more]
AT3G12600.2	9.2e-56	59.09	nudix hydrolase homolog 16	[more]
AT1G12880.1	3.6e-36	46.63	nudix hydrolase homolog 12	[more]
AT3G26690.1	3.4e-34	45.25	nudix hydrolase homolog 13	[more]
AT3G26690.2	3.4e-34	45.25	nudix hydrolase homolog 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 5..172 e-value: 1.6E-22 score: 81.7
None	No IPR available	PANTHER	PTHR12629	DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE	coord: 1..82
None	No IPR available	PANTHER	PTHR12629	DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE	coord: 103..184
None	No IPR available	PANTHER	PTHR12629:SF63	OS03G0810300 PROTEIN	coord: 1..82
None	No IPR available	PANTHER	PTHR12629:SF63	OS03G0810300 PROTEIN	coord: 103..184
None	No IPR available	CDD	cd04666	Nudix_Hydrolase_9	coord: 37..167 e-value: 1.96267E-33 score: 113.479
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 42..166 e-value: 7.3E-10 score: 39.0
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 24..174 score: 10.852551
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 58..79
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 41..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G001020.1	CmoCh12G001020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity