Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACTGGGTAACAACAATTTCTTTTGTCTTGTATTCTACTTGAAAGTTCTTCATTTTTATTACTGTTTTTATTCCCTCTTTGCTTTTCTACCCAATGATCTTATGTTGTTTTGTAAAAGGAAAGTTTATTTACTATCGTTTTCGTGCTATTTACGCTCGTCAATCTACTGCCTTTTGTCCAACTTGCTGTTCTAAGTTACATTTGTAATTATGTATCTGCAGAAAGTGACCTTCCATTTTACTCTTCAATGACCAGCTCAAATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCGAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCTGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCCGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGACAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCTAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGGTGCAAAAGCTAGTTAGGGAAAGTCACTCTTCCGAGTCTTTAGACAGCCTAGGTATCCAGGTATGCATATTTCTGGTCAAGTTATTAATCATGTTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACACCCTTTATAAATGTGTGGAAACCTCTCCCTAGCAGACGCATTTTAAAAACTTTGAGGGAAACTCCGAAAGGGAAAGCCCAAAGAAGGCAATATTTGCTAACGGTGGACTTGGTCTGTTACAAATGGTATTAGAGCCAAACACCGAGCGGTGTGCTAGCGAGAATGCTGGGCCCCGAAGGGGGGTGAATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGCCGATGCGTTTTAAAAACTTTGAGATAAATCCCGTAAGGGAAAACCCAAAGAGGACAATATCTACTAGCGGTGTGCTTGGGCTTGAACTGTTACAGATGTTCCTCTTGCACCTCATGTTCAAGTGATTCTGAACTTTTCAGTGCACTTCATGTTCAAGTGATTCTGAACTTTTCAGGTTTGATGTTTTTCAGAATTGGTTGATGTAGGTTGGATTTCTTGTAATGGCAGATATCTAGTGAAAAAGCCAACTCGGAAGACCCTGCTTCAGCTTTCAAATCTGTTGAATCTTGCAATGACAATTCTGCTCTGGGAACTGAGGCAGAATCACCAAATGAAAACATTCCAACACAACAACCTTCAGCTCATAATAATGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGTCAATGGTGAAGAAGAACACCATGGAAATATCAACTCAGACTACCCAGGACCCATGACCAGTAGTGCTGGGACACAGGAGTGTTATGGAAGCAACGATTCTGCATTCGGAACCCAAGTTTCGACAAGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATGTAAGTAGCAAGCAATCTCTCTTCTCTTCTTGATCTATCCTGTCCTAAATTGTAATCCAAGGTGAATGATATTTACAGATTACAACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGAGTGCTTTCTTTGTTTTGCTATCAGTAGAGGTAGATTCTGTCCACACATGTAAGTAGAAGATGCATTATTTCTTTGCTATTATGTGAAATTTAAGGTGTTAGTAATACCTCATCTCTTTCTCTCTGGTTGTTTCTTGTTTCTGCACTCATTCATATTGTTCTTTGATTTGTATAAGAACACGATATGACATAGTTTCTCTGCATAGAATGATATTATCACAACTCTTCCACAAGAGTTAAATTTTTATCACAAACTCTTATATGAGACAAT
mRNA sequence
ATGAAACTGGAAAGTGACCTTCCATTTTACTCTTCAATGACCAGCTCAAATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCGAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCTGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCCGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGACAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCTAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGGTGCAAAAGCTAGTTAGGGAAAGTCACTCTTCCGAGTCTTTAGACAGCCTAGGTATCCAGATATCTAGTGAAAAAGCCAACTCGGAAGACCCTGCTTCAGCTTTCAAATCTGTTGAATCTTGCAATGACAATTCTGCTCTGGGAACTGAGGCAGAATCACCAAATGAAAACATTCCAACACAACAACCTTCAGCTCATAATAATGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGTCAATGGTGAAGAAGAACACCATGGAAATATCAACTCAGACTACCCAGGACCCATGACCAGTAGTGCTGGGACACAGGAGTGTTATGGAAGCAACGATTCTGCATTCGGAACCCAAGTTTCGACAAGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATATTACAACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGAGTGCTTTCTTTGTTTTGCTATCAGTAGAGGTAGATTCTGTCCACACATGTAAGTAGAAGATGCATTATTTCTTTGCTATTATGTGAAATTTAAGGTGTTAGTAATACCTCATCTCTTTCTCTCTGGTTGTTTCTTGTTTCTGCACTCATTCATATTGTTCTTTGATTTGTATAAGAACACGATATGACATAGTTTCTCTGCATAGAATGATATTATCACAACTCTTCCACAAGAGTTAAATTTTTATCACAAACTCTTATATGAGACAAT
Coding sequence (CDS)
ATGAAACTGGAAAGTGACCTTCCATTTTACTCTTCAATGACCAGCTCAAATTGTGTTCCAGAATCTATTGAATGCAATTACAATACTGAGTTGCAACACCAGATCGTTAGTATCGATCCAATTGGTCTCTTGTGTCGAGAAAAGATAAACCACGAGGATGCCATTCAATCTCCATCTTCAACTGGTGGTGGGAATAGTTGCCTGACCACTAAAATTAACCACTCGTCTGTAGATTGTTTTGATGATAATGCTGAAGGTATTAATGCATTTATGTCATCATCCGGTAAGAAATCCTCAGACTCGTATGTGGACAAAAGTGTCATGGAATGTCAAATGTCGACAATGATAGTATGTGACAAGGAAATTAATGTCAATGATGTGAAGGACATCTGTATTGATGAAGGGGTGCCTTCTTTGGTCAACTTCATCTTTAGGAGTACGGATGAGAAGTCAAGCTACAAAACCCTGCCTTTGAACCAAAATGAAGGTTCTATAAAAGAACAAAAGAATTCTTCTGAGGTGTTGGAGTCCATTGCAGATAATAAAAAAATCTCTTTAGAAGATCACTTTGCCACGGACTGGAGTACTCATAATGATGCTAAGGATCTGAATCAGATAGAGGAAGCAAAACTCAATCAAAGTGAACCACAAGTTCCGGTGCAAAAGCTAGTTAGGGAAAGTCACTCTTCCGAGTCTTTAGACAGCCTAGGTATCCAGATATCTAGTGAAAAAGCCAACTCGGAAGACCCTGCTTCAGCTTTCAAATCTGTTGAATCTTGCAATGACAATTCTGCTCTGGGAACTGAGGCAGAATCACCAAATGAAAACATTCCAACACAACAACCTTCAGCTCATAATAATGAATTTGAGAAGGGAAGTACTACATTGAATCTCAATTCAATCTCTCCCATGGTCAATGGTGAAGAAGAACACCATGGAAATATCAACTCAGACTACCCAGGACCCATGACCAGTAGTGCTGGGACACAGGAGTGTTATGGAAGCAACGATTCTGCATTCGGAACCCAAGTTTCGACAAGTCGATTAATTTCAAGCCAGACTGCACACGACAGTGGCGAGTCTAGTTTCTCTGCTCTAGATCCATTAGCTAGCCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCGGAAAGTAGCACGACAAGCACCCGCTCTTTTGCCTTCCCTATATTACAACAGTCTGAATGGAATAGCAGCCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGATGGAGGGAGGGGCTTCTATGCTGCAGATTCTGA
Protein sequence
MKLESDLPFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQISSEKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISPMVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF
Homology
BLAST of CmoCh12G000950 vs. ExPASy TrEMBL
Match:
A0A6J1GGY0 (uncharacterized protein LOC111454119 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454119 PE=4 SV=1)
HSP 1 Score: 848.6 bits (2191), Expect = 1.2e-242
Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 0
Query: 1 MKLESDLPFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSS 60
MKLESDLPFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSS
Sbjct: 1 MKLESDLPFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSS 60
Query: 61 TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDK 120
TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDK
Sbjct: 61 TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDK 120
Query: 121 EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIAD 180
EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIAD
Sbjct: 121 EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIAD 180
Query: 181 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQI 240
NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQI
Sbjct: 181 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQI 240
Query: 241 SSEKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNS 300
SSEKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNS
Sbjct: 241 SSEKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNS 300
Query: 301 ISPMVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGE 360
ISPMVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGE
Sbjct: 301 ISPMVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGE 360
Query: 361 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAE 420
SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAE
Sbjct: 361 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAE 420
Query: 421 RRHYRKYRGWREGLLCCRF 440
RRHYRKYRGWREGLLCCRF
Sbjct: 421 RRHYRKYRGWREGLLCCRF 439
BLAST of CmoCh12G000950 vs. ExPASy TrEMBL
Match:
A0A6J1GH17 (uncharacterized protein LOC111454119 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454119 PE=4 SV=1)
HSP 1 Score: 822.0 bits (2122), Expect = 1.2e-234
Identity = 425/426 (99.77%), Postives = 425/426 (99.77%), Query Frame = 0
Query: 14 TSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKIN 73
T SNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKIN
Sbjct: 8 TGSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKIN 67
Query: 74 HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICID 133
HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICID
Sbjct: 68 HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICID 127
Query: 134 EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATD 193
EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATD
Sbjct: 128 EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATD 187
Query: 194 WSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQISSEKANSEDPASA 253
WSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQISSEKANSEDPASA
Sbjct: 188 WSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQISSEKANSEDPASA 247
Query: 254 FKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISPMVNGEEEHHG 313
FKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISPMVNGEEEHHG
Sbjct: 248 FKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISPMVNGEEEHHG 307
Query: 314 NINSDYPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLV 373
NINSDYPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLV
Sbjct: 308 NINSDYPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLV 367
Query: 374 TYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAERRHYRKYRGWREG 433
TYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAERRHYRKYRGWREG
Sbjct: 368 TYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAERRHYRKYRGWREG 427
Query: 434 LLCCRF 440
LLCCRF
Sbjct: 428 LLCCRF 433
BLAST of CmoCh12G000950 vs. ExPASy TrEMBL
Match:
A0A6J1KPB6 (uncharacterized protein LOC111496042 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496042 PE=4 SV=1)
HSP 1 Score: 807.4 bits (2084), Expect = 3.0e-230
Identity = 422/439 (96.13%), Postives = 427/439 (97.27%), Query Frame = 0
Query: 1 MKLESDLPFYSSMTSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSS 60
MKLESD PFYSSMTSSNCVPESIE NYNTELQHQI+SIDPIGLLCREKINHEDAIQSPSS
Sbjct: 1 MKLESDPPFYSSMTSSNCVPESIEGNYNTELQHQIISIDPIGLLCREKINHEDAIQSPSS 60
Query: 61 TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDK 120
TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMS MIVCDK
Sbjct: 61 TGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDK 120
Query: 121 EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIAD 180
EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGS+KEQKNSSEVLESIAD
Sbjct: 121 EINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSVKEQKNSSEVLESIAD 180
Query: 181 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQI 240
NKKISLEDHFA+DWSTHNDAKDLNQIEEAKLNQSEPQV VQKLVRESHSSESLD+LGIQI
Sbjct: 181 NKKISLEDHFASDWSTHNDAKDLNQIEEAKLNQSEPQVLVQKLVRESHSSESLDNLGIQI 240
Query: 241 SSEKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNS 300
SSEKANSEDPASAFKSVESCNDNSALGTEAES NENIPTQ PSA NNEFEKGSTTLNLNS
Sbjct: 241 SSEKANSEDPASAFKSVESCNDNSALGTEAESTNENIPTQHPSARNNEFEKGSTTLNLNS 300
Query: 301 ISPMVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGE 360
ISPM NGEEEHHGNI D+PGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHD GE
Sbjct: 301 ISPMANGEEEHHGNIKLDFPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDCGE 360
Query: 361 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAE 420
SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPIL QSEWNSSPVKMVKAE
Sbjct: 361 SSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPIL-QSEWNSSPVKMVKAE 420
Query: 421 RRHYRKYRGWREGLLCCRF 440
RRHYRKYRGWREGLLCCRF
Sbjct: 421 RRHYRKYRGWREGLLCCRF 438
BLAST of CmoCh12G000950 vs. ExPASy TrEMBL
Match:
A0A6J1KID4 (uncharacterized protein LOC111496042 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496042 PE=4 SV=1)
HSP 1 Score: 783.5 bits (2022), Expect = 4.7e-223
Identity = 409/426 (96.01%), Postives = 414/426 (97.18%), Query Frame = 0
Query: 14 TSSNCVPESIECNYNTELQHQIVSIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKIN 73
T SNCVPESIE NYNTELQHQI+SIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKIN
Sbjct: 8 TGSNCVPESIEGNYNTELQHQIISIDPIGLLCREKINHEDAIQSPSSTGGGNSCLTTKIN 67
Query: 74 HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICID 133
HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMS MIVCDKEINVNDVKDICID
Sbjct: 68 HSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEINVNDVKDICID 127
Query: 134 EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATD 193
EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGS+KEQKNSSEVLESIADNKKISLEDHFA+D
Sbjct: 128 EGVPSLVNFIFRSTDEKSSYKTLPLNQNEGSVKEQKNSSEVLESIADNKKISLEDHFASD 187
Query: 194 WSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQISSEKANSEDPASA 253
WSTHNDAKDLNQIEEAKLNQSEPQV VQKLVRESHSSESLD+LGIQISSEKANSEDPASA
Sbjct: 188 WSTHNDAKDLNQIEEAKLNQSEPQVLVQKLVRESHSSESLDNLGIQISSEKANSEDPASA 247
Query: 254 FKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSISPMVNGEEEHHG 313
FKSVESCNDNSALGTEAES NENIPTQ PSA NNEFEKGSTTLNLNSISPM NGEEEHHG
Sbjct: 248 FKSVESCNDNSALGTEAESTNENIPTQHPSARNNEFEKGSTTLNLNSISPMANGEEEHHG 307
Query: 314 NINSDYPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLV 373
NI D+PGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHD GESSFSALDPLASLV
Sbjct: 308 NIKLDFPGPMTSSAGTQECYGSNDSAFGTQVSTSRLISSQTAHDCGESSFSALDPLASLV 367
Query: 374 TYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSSPVKMVKAERRHYRKYRGWREG 433
TYSGPIAYSGSISLRSESSTTSTRSFAFPIL QSEWNSSPVKMVKAERRHYRKYRGWREG
Sbjct: 368 TYSGPIAYSGSISLRSESSTTSTRSFAFPIL-QSEWNSSPVKMVKAERRHYRKYRGWREG 427
Query: 434 LLCCRF 440
LLCCRF
Sbjct: 428 LLCCRF 432
BLAST of CmoCh12G000950 vs. ExPASy TrEMBL
Match:
A0A6J1BS70 (uncharacterized protein LOC111005214 OS=Momordica charantia OX=3673 GN=LOC111005214 PE=4 SV=1)
HSP 1 Score: 540.4 bits (1391), Expect = 6.9e-150
Identity = 307/450 (68.22%), Postives = 355/450 (78.89%), Query Frame = 0
Query: 1 MKLESDLPFYSSMTSSNCVPESIECNYNT-ELQHQIVSIDPIGLLCREKINHEDAIQSPS 60
MKLESD P Y S+TS CVP+ +ECNY+T E Q+Q++S +PIGL C EKIN EDAIQS
Sbjct: 1 MKLESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSY 60
Query: 61 STGGGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCD 120
STG NSC TK + SSVD FDDNA+GI+AF++ S KK SDSYVDKSVME QM IVCD
Sbjct: 61 STGHENSCTGTKXSCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCD 120
Query: 121 KEINVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSIKEQKNSSEVLES 180
+EI+VNDVKDICID+G+ SL NF FRSTDEKS +K L L + NE IKE +NSS+V +S
Sbjct: 121 QEIDVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKS 180
Query: 181 IADNKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLG 240
IAD+KKISLEDHFA DW+TH+DAKDL QIEEA+L+ E +V +QKLVR+S SE+L ++G
Sbjct: 181 IADDKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETLYNIG 240
Query: 241 IQISSEKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLN 300
+QIS EKAN +D AS KSV ALG+ AESPN+N PT P AHN+EFE GS TLN
Sbjct: 241 VQISGEKANLDDSASVSKSV-------ALGSSAESPNDNNPT-YPLAHNHEFENGSITLN 300
Query: 301 LNSISPMVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVST--------SRL 360
NS+SP+VNG EE+HGN +YP P+ SS+ TQEC S+ SA TQVST +RL
Sbjct: 301 FNSVSPVVNGGEENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARL 360
Query: 361 ISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEW 420
+SSQT HD GESSFSA+DPLASLVTYSGPIAYSGSISLRSESS STRSFAFPIL QSEW
Sbjct: 361 VSSQTQHDIGESSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPIL-QSEW 420
Query: 421 NSSPVKMVKAERRHYRKYRGWREGLLCCRF 440
NSSPVKMVKAERRHYRKYRGWREGLLCCRF
Sbjct: 421 NSSPVKMVKAERRHYRKYRGWREGLLCCRF 441
BLAST of CmoCh12G000950 vs. TAIR 10
Match:
AT2G03810.1 (18S pre-ribosomal assembly protein gar2-related )
HSP 1 Score: 125.6 bits (314), Expect = 1.0e-28
Identity = 130/389 (33.42%), Postives = 178/389 (45.76%), Query Frame = 0
Query: 82 DNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICIDEGVPSLVN 141
D + +A + S KK Y+DK+V C + ++VC KE + VKDIC+DEGVP
Sbjct: 70 DTSHDCDANVDSPEKKDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEK 129
Query: 142 FIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHND-- 201
F+F D S T L + + K N SE + K+ + F D T D
Sbjct: 130 FLFGEKDSVKSSSTEDLMKAD---KTNVNPSETKSAEDSISKVD-DSEFCNDHKTDRDVE 189
Query: 202 ---AKDLNQIEEAKLNQSEPQVPVQKLVRESHS-----------SESLDSLGI---QISS 261
+D E N ++ + V + V+ S + S D + I S
Sbjct: 190 ESSGEDFADAEGTSSNYNQEHLIVTEEVKASPTHGLSPSEIEPDENSKDEVAISQDNDSK 249
Query: 262 EKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSIS 321
E D S +S N ++ ++S E P+Q E + L
Sbjct: 250 ECLTLGDILSREDEQKSLNQDN---ISSDSHEEQSPSQLQDKEKRSLETTAIETELEKTE 309
Query: 322 PMVNGEEE---------HHGNINSDYP-GPMTSSAGTQECYGSNDSAFGTQVSTSRLISS 381
GEE+ N + P P T + Q C N S + S+SR
Sbjct: 310 EPKQGEEKLSSVSTTTSQEPNKTCNEPEKPETENHHQQNCLVEN-SYEDDKFSSSRF--- 369
Query: 382 QTAHDSGESSFSALD--PLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWN 440
GE+SFSA D ++ +TYSGPIAYSGS+S+RS++STTS RSFAFPIL QSEWN
Sbjct: 370 ------GETSFSAADSVSISGHITYSGPIAYSGSLSVRSDASTTSGRSFAFPIL-QSEWN 429
BLAST of CmoCh12G000950 vs. TAIR 10
Match:
AT2G03810.2 (18S pre-ribosomal assembly protein gar2-related )
HSP 1 Score: 125.6 bits (314), Expect = 1.0e-28
Identity = 130/389 (33.42%), Postives = 178/389 (45.76%), Query Frame = 0
Query: 82 DNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICIDEGVPSLVN 141
D + +A + S KK Y+DK+V C + ++VC KE + VKDIC+DEGVP
Sbjct: 70 DTSHDCDANVDSPEKKDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEK 129
Query: 142 FIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHND-- 201
F+F D S T L + + K N SE + K+ + F D T D
Sbjct: 130 FLFGEKDSVKSSSTEDLMKAD---KTNVNPSETKSAEDSISKVD-DSEFCNDHKTDRDVE 189
Query: 202 ---AKDLNQIEEAKLNQSEPQVPVQKLVRESHS-----------SESLDSLGI---QISS 261
+D E N ++ + V + V+ S + S D + I S
Sbjct: 190 ESSGEDFADAEGTSSNYNQEHLIVTEEVKASPTHGLSPSEIEPDENSKDEVAISQDNDSK 249
Query: 262 EKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSIS 321
E D S +S N ++ ++S E P+Q E + L
Sbjct: 250 ECLTLGDILSREDEQKSLNQDN---ISSDSHEEQSPSQLQDKEKRSLETTAIETELEKTE 309
Query: 322 PMVNGEEE---------HHGNINSDYP-GPMTSSAGTQECYGSNDSAFGTQVSTSRLISS 381
GEE+ N + P P T + Q C N S + S+SR
Sbjct: 310 EPKQGEEKLSSVSTTTSQEPNKTCNEPEKPETENHHQQNCLVEN-SYEDDKFSSSRF--- 369
Query: 382 QTAHDSGESSFSALD--PLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWN 440
GE+SFSA D ++ +TYSGPIAYSGS+S+RS++STTS RSFAFPIL QSEWN
Sbjct: 370 ------GETSFSAADSVSISGHITYSGPIAYSGSLSVRSDASTTSGRSFAFPIL-QSEWN 429
BLAST of CmoCh12G000950 vs. TAIR 10
Match:
AT2G03810.3 (18S pre-ribosomal assembly protein gar2-related )
HSP 1 Score: 125.6 bits (314), Expect = 1.0e-28
Identity = 130/389 (33.42%), Postives = 178/389 (45.76%), Query Frame = 0
Query: 82 DNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICIDEGVPSLVN 141
D + +A + S KK Y+DK+V C + ++VC KE + VKDIC+DEGVP
Sbjct: 70 DTSHDCDANVDSPEKKDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEK 129
Query: 142 FIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHND-- 201
F+F D S T L + + K N SE + K+ + F D T D
Sbjct: 130 FLFGEKDSVKSSSTEDLMKAD---KTNVNPSETKSAEDSISKVD-DSEFCNDHKTDRDVE 189
Query: 202 ---AKDLNQIEEAKLNQSEPQVPVQKLVRESHS-----------SESLDSLGI---QISS 261
+D E N ++ + V + V+ S + S D + I S
Sbjct: 190 ESSGEDFADAEGTSSNYNQEHLIVTEEVKASPTHGLSPSEIEPDENSKDEVAISQDNDSK 249
Query: 262 EKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSIS 321
E D S +S N ++ ++S E P+Q E + L
Sbjct: 250 ECLTLGDILSREDEQKSLNQDN---ISSDSHEEQSPSQLQDKEKRSLETTAIETELEKTE 309
Query: 322 PMVNGEEE---------HHGNINSDYP-GPMTSSAGTQECYGSNDSAFGTQVSTSRLISS 381
GEE+ N + P P T + Q C N S + S+SR
Sbjct: 310 EPKQGEEKLSSVSTTTSQEPNKTCNEPEKPETENHHQQNCLVEN-SYEDDKFSSSRF--- 369
Query: 382 QTAHDSGESSFSALD--PLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWN 440
GE+SFSA D ++ +TYSGPIAYSGS+S+RS++STTS RSFAFPIL QSEWN
Sbjct: 370 ------GETSFSAADSVSISGHITYSGPIAYSGSLSVRSDASTTSGRSFAFPIL-QSEWN 429
BLAST of CmoCh12G000950 vs. TAIR 10
Match:
AT2G03810.4 (18S pre-ribosomal assembly protein gar2-related )
HSP 1 Score: 125.6 bits (314), Expect = 1.0e-28
Identity = 130/389 (33.42%), Postives = 178/389 (45.76%), Query Frame = 0
Query: 82 DNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEINVNDVKDICIDEGVPSLVN 141
D + +A + S KK Y+DK+V C + ++VC KE + VKDIC+DEGVP
Sbjct: 70 DTSHDCDANVDSPEKKDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEK 129
Query: 142 FIFRSTDEKSSYKTLPLNQNEGSIKEQKNSSEVLESIADNKKISLEDHFATDWSTHND-- 201
F+F D S T L + + K N SE + K+ + F D T D
Sbjct: 130 FLFGEKDSVKSSSTEDLMKAD---KTNVNPSETKSAEDSISKVD-DSEFCNDHKTDRDVE 189
Query: 202 ---AKDLNQIEEAKLNQSEPQVPVQKLVRESHS-----------SESLDSLGI---QISS 261
+D E N ++ + V + V+ S + S D + I S
Sbjct: 190 ESSGEDFADAEGTSSNYNQEHLIVTEEVKASPTHGLSPSEIEPDENSKDEVAISQDNDSK 249
Query: 262 EKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNSIS 321
E D S +S N ++ ++S E P+Q E + L
Sbjct: 250 ECLTLGDILSREDEQKSLNQDN---ISSDSHEEQSPSQLQDKEKRSLETTAIETELEKTE 309
Query: 322 PMVNGEEE---------HHGNINSDYP-GPMTSSAGTQECYGSNDSAFGTQVSTSRLISS 381
GEE+ N + P P T + Q C N S + S+SR
Sbjct: 310 EPKQGEEKLSSVSTTTSQEPNKTCNEPEKPETENHHQQNCLVEN-SYEDDKFSSSRF--- 369
Query: 382 QTAHDSGESSFSALD--PLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWN 440
GE+SFSA D ++ +TYSGPIAYSGS+S+RS++STTS RSFAFPIL QSEWN
Sbjct: 370 ------GETSFSAADSVSISGHITYSGPIAYSGSLSVRSDASTTSGRSFAFPIL-QSEWN 429
BLAST of CmoCh12G000950 vs. TAIR 10
Match:
AT1G13650.2 (BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in 255 species: Archae - 22; Bacteria - 222; Metazoa - 684; Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes - 2392 (source: NCBI BLink). )
HSP 1 Score: 53.1 bits (126), Expect = 6.4e-07
Identity = 36/91 (39.56%), Postives = 49/91 (53.85%), Query Frame = 0
Query: 335 SNDSAFGTQVSTSRLISSQTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTT 394
+ +S + L+ + GE SF +TY GP++ S ++S+RS+ T
Sbjct: 102 TEESEADNSCDDNNLLKRNLPNGFGEISFCEAKSSLDYITYCGPLSGSENLSIRSDG--T 161
Query: 395 STRSFAFPILQQSEWNSSPVKMVKAERRHYR 426
S SFA PIL QSEWNSSPV+M KAE R
Sbjct: 162 SASSFALPIL-QSEWNSSPVRMGKAEETQLR 189
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1GGY0 | 1.2e-242 | 100.00 | uncharacterized protein LOC111454119 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1GH17 | 1.2e-234 | 99.77 | uncharacterized protein LOC111454119 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1KPB6 | 3.0e-230 | 96.13 | uncharacterized protein LOC111496042 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1KID4 | 4.7e-223 | 96.01 | uncharacterized protein LOC111496042 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1BS70 | 6.9e-150 | 68.22 | uncharacterized protein LOC111005214 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
Match Name | E-value | Identity | Description | |
AT2G03810.1 | 1.0e-28 | 33.42 | 18S pre-ribosomal assembly protein gar2-related | [more] |
AT2G03810.2 | 1.0e-28 | 33.42 | 18S pre-ribosomal assembly protein gar2-related | [more] |
AT2G03810.3 | 1.0e-28 | 33.42 | 18S pre-ribosomal assembly protein gar2-related | [more] |
AT2G03810.4 | 1.0e-28 | 33.42 | 18S pre-ribosomal assembly protein gar2-related | [more] |
AT1G13650.2 | 6.4e-07 | 39.56 | BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein g... | [more] |