CmoCh12G000860 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G000860
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUbiquinone biosynthesis protein COQ4 homolog, mitochondrial
LocationCmo_Chr12: 463930 .. 467011 (-)
RNA-Seq ExpressionCmoCh12G000860
SyntenyCmoCh12G000860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCACTGCTCTCTTAATTCCTTCCCGCTTCTCCCTTGGTGGCATTTGTTCGTTCTGGACCTTTCTCCCGCTCTTCGATTCATAGAATCATTTCTATTGCCTTCTTTAACTCTCTCAATCTGGATCAGGAACGTTCGCTTTCACTTTCTCTTGCTCCCTGATTGAATCTCATTCGAAGAATTGCTCGGAGAAAAGGTAATCACGTTTCGTTTCAATTCATTTCGTTTCGTGTTGTAAATTTTAGTCGCAGTCTTTCCTCTCGCTTCTTAGCTCAATGATAACGTTTTTTCGGTCGATTATATTATCAATTGTTATTACTGAATTAGCGTCTCTTTCTGAAACTGCTTGTATGTGTTTGCATAGCATGACAATTCAATGCGTTTGTAAAATTTGGTGTTGCGTGCTCAACCGATTCAATCAGCTGATTCATGGCCTATATTTCAATTTGATTCAGCTTTTCTATTTGATTTTTGTTTGGTCGAACGTGTCGCGGCTTTCGTTTGGCAATTCTCGGTGTTGGATTTACTTTGGACTCTGATGTCATTAGTTTTTCTTAATTCAACTTTGGTTTCCTTGTTGATTTACGGGGAAATTTATGGAGTTTTGAATATATTTCTCGACATCGGTTTTCCAGAGAATCACGTTCGTACTAATGAATGATTTGCTCTTACTACTTACTCGAGAAATCCTGGACAATTTAGTGAGAACAGATCGATTGCGAAAGTGGTGGAGTTCGCTCTATAGGATATTTTTTTTCTTTATTACCATCATATCCATAGTTTTATGTTATGTTGCAAGGATAAGCTATGAGATATTATGATGTTGCTGATATTCAGGCAGAAGCTAACTATTTCTGCAGATGGTTTTGTTGTTTATCTACTGTTAGTCATGGAGTCTATTGAAATCAGACGGCCTATAGTTTGTCGCAGTTATCTTTTAGCCTCTCAAGATTTTTTCATTATTCGTAGAGAAGAGAGGTTGGGATCTGGTTAGACATTTAAGCTAAATTAATTTTGATCCTAAAGTAGATGATGACTTTTCTGCTAGTGAATTTGCTTTAAACATTGGTGTCACACTGTGCTGTAGCCTTTTGCTGTACTTTACGTTCTTTTAAGGTAGGGCATTCTTTACATCTCAACACTTCAATGACCAAACAAATAATTTCCAAGTTTTGTTGAGCCAGCATTCCCTTGATATTTCTCTAAAAATCCTACTCTCAGCATATGACACATATTCCCCTTGTATAGCAAGTGTTAGGAGAAATGCTTCCTAAAGTGCCAAGTTCTGTTAAGTATTACTTCTCTTTTAATTTAATATGTACCTTCTCTTGGCTGGAGTTGTGATCTATTCTATCTAGATAGCCTCTATTTAGGTCTAAAATTACTTAAGATTTTTGTATACTTGATATTTGGTTTTAGGTATTTTTATATTTTCATTGTTGAAGTATGGTTTAGAACTTCTGATGAAGAGAAATAGCCAATTTTTGAAGGTATTGTTGGTTAGTTTGAACTTGTACGTATCTAGTAAATTACTTTTTATGGTTTCGTTATGGTCTTCAATGATCGAGCATTTTTATCTTTTTTCCCCCCTCATTACAGCAAACAGAAAAAAAAAAGGTACTGTTGGATATGGTAGGTGTACGTATCCAGCTAAATAAATGGCAGCAAGCAGCTGTTGCACTTGGTTCAGCAGTAGGCGCCTTGCTTGATCCACGCCGAGCAGATCTAATAGCAGCTCTTGGGGAGACAACCGGAAAGCCATCATTTGAAAGAGTCCTCGAGAGGATGAAAAGAAGTGATGAAGGCAGAGTAAGCTCTTAATTTTGTAATACTATGTTTAATATTTCCATGTTTCATATTCCTTCGTGGTTTGCAAGTCTTTTCTCATGGAATAAAAATGAAAAACCTAATATGCTTATATTTAATAAGATGAAGAATACAAAAGGAATAGAATGGTTATCTTGTATAACTGATGGAATTGCTTTTATTTGATTGCTGCAGAAACAACTTGGTTTAGTTTTTCTTCTTTAAATTCATTTTTGAGAATGAATTGGGACTTGTAAGTTATTGACTTGATGTTCTTGTGTATTCCTATTGGATAATGTAATTGGCTGAGAAGCTCATGCATTACTTTCTTCCCCTCCCCATCAAGGCTTCCTTTCCTCTCTTGGAAACAAAAACATGAAACACTAGTTTAACCGAAGTGTTGGTATTGGAAATGCTCTAGAACACATGATATGGAGCAATGCAACTAAGTTGGAACCTCAATTTACCATTTCAAATGAATATTTTAGTTTCTTTTATTTCATTCTCTTGCCTGGTTAAATTGTTTCATTTTTTCCATTTGGCTAATATGGAAGGCATCAACATTTCAAATTTATTGAGAGATCGTCATTTTCGCTCAGTTATTTCCTTTCCGTCATGTTACTTGTCCCAAATGAACTTTATCATGATGTTCCAGTTTCAGCTTTCTAAATTTATTTTTCATCTGTTGTATGACTAGAATCTCTTGAAATTCCTTGGTACCATGTATGGGCTTTCGTGAGTCGTCCATTTGAGTATGAAACAAAACAAATTTCTTCTACAGGCAGTGTTGTTGGAGCGACCACGTGTTTTATCATCAGAAGTTGGGCATGCGTGGGACCTTCCATCCAACACATTTGGCTCTGCATATGCCAATTTTATGGGTTCCAGGAACTTTTCTCCAGATGACCGGCCTCCTGTTCGGTTCATGGATACTGACGAACTGGAATATGTTGCCATGCGAGCTCGCGAGGTTCATGACTTTTGGCACACGCTTTTTGGTCTTCCCACCAACTTGATTGGTGAGTCGGCATTGAAGGTTATTGAATTTGAGCAAATGCACCTCCCAATGTGCATGCTGTCCGTTTTGGGAGGCACAGCAAGGTTCAATGATAAACAGAGAAATTTGTTCTTCCTGCACTACTTCCCTTGGGCCATCCGTGCTGGCATGCGGTGCAATGATCTCATGTGCATATATTATGAGCGACACTTCCACGAGGATTTGGATGACGTGCGGGCGAAATGGGGAATAATTCCTGCACCTCCATCTCCAAAAGGTTAA

mRNA sequence

GCACTGCTCTCTTAATTCCTTCCCGCTTCTCCCTTGGTGGCATTTGTTCGTTCTGGACCTTTCTCCCGCTCTTCGATTCATAGAATCATTTCTATTGCCTTCTTTAACTCTCTCAATCTGGATCAGGAACGTTCGCTTTCACTTTCTCTTGCTCCCTGATTGAATCTCATTCGAAGAATTGCTCGGAGAAAAGCAAACAGAAAAAAAAAAGGTACTGTTGGATATGGTAGGTGTACGTATCCAGCTAAATAAATGGCAGCAAGCAGCTGTTGCACTTGGTTCAGCAGTAGGCGCCTTGCTTGATCCACGCCGAGCAGATCTAATAGCAGCTCTTGGGGAGACAACCGGAAAGCCATCATTTGAAAGAGTCCTCGAGAGGATGAAAAGAAGTGATGAAGGCAGAGCAGTGTTGTTGGAGCGACCACGTGTTTTATCATCAGAAGTTGGGCATGCGTGGGACCTTCCATCCAACACATTTGGCTCTGCATATGCCAATTTTATGGGTTCCAGGAACTTTTCTCCAGATGACCGGCCTCCTGTTCGGTTCATGGATACTGACGAACTGGAATATGTTGCCATGCGAGCTCGCGAGGTTCATGACTTTTGGCACACGCTTTTTGGTCTTCCCACCAACTTGATTGGTGAGTCGGCATTGAAGGTTATTGAATTTGAGCAAATGCACCTCCCAATGTGCATGCTGTCCGTTTTGGGAGGCACAGCAAGGTTCAATGATAAACAGAGAAATTTGTTCTTCCTGCACTACTTCCCTTGGGCCATCCGTGCTGGCATGCGGTGCAATGATCTCATGTGCATATATTATGAGCGACACTTCCACGAGGATTTGGATGACGTGCGGGCGAAATGGGGAATAATTCCTGCACCTCCATCTCCAAAAGGTTAA

Coding sequence (CDS)

ATGGTAGGTGTACGTATCCAGCTAAATAAATGGCAGCAAGCAGCTGTTGCACTTGGTTCAGCAGTAGGCGCCTTGCTTGATCCACGCCGAGCAGATCTAATAGCAGCTCTTGGGGAGACAACCGGAAAGCCATCATTTGAAAGAGTCCTCGAGAGGATGAAAAGAAGTGATGAAGGCAGAGCAGTGTTGTTGGAGCGACCACGTGTTTTATCATCAGAAGTTGGGCATGCGTGGGACCTTCCATCCAACACATTTGGCTCTGCATATGCCAATTTTATGGGTTCCAGGAACTTTTCTCCAGATGACCGGCCTCCTGTTCGGTTCATGGATACTGACGAACTGGAATATGTTGCCATGCGAGCTCGCGAGGTTCATGACTTTTGGCACACGCTTTTTGGTCTTCCCACCAACTTGATTGGTGAGTCGGCATTGAAGGTTATTGAATTTGAGCAAATGCACCTCCCAATGTGCATGCTGTCCGTTTTGGGAGGCACAGCAAGGTTCAATGATAAACAGAGAAATTTGTTCTTCCTGCACTACTTCCCTTGGGCCATCCGTGCTGGCATGCGGTGCAATGATCTCATGTGCATATATTATGAGCGACACTTCCACGAGGATTTGGATGACGTGCGGGCGAAATGGGGAATAATTCCTGCACCTCCATCTCCAAAAGGTTAA

Protein sequence

MVGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFPWAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPKG
Homology
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BLAST of CmoCh12G000860 vs. ExPASy Swiss-Prot
Match: Q9ZPR0 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g03690 PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 7.1e-108
Identity = 177/220 (80.45%), Postives = 201/220 (91.36%), Query Frame = 0 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           R+ L++WQQAAVA+GSA+GAL+DPRRADLIAALGETTGKP+FE VLERMK+S+EGRA+LL
Sbjct: 7   RVPLSRWQQAAVAMGSALGALVDPRRADLIAALGETTGKPAFEMVLERMKKSEEGRAILL 66

Query: 65  ERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAREV 124
           ERPRV+S +VGHAWDLP NTFG+AYA FMGSRNFSPDDRPPVRFM+TDEL YVA RAREV
Sbjct: 67  ERPRVVSEQVGHAWDLPENTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVATRAREV 126

Query: 125 HDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFPWA 184
           HD WHTLFGLPTNLIGES+LKVIEFEQM+LPMCMLSV+GGT RFN+KQR++F  HY PWA
Sbjct: 127 HDLWHTLFGLPTNLIGESSLKVIEFEQMYLPMCMLSVIGGTVRFNEKQRSMFLKHYLPWA 186

Query: 185 IRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPK 225
           +RAG +C DLMC+YYERHF EDL+ VR KWGIIPAP  PK
Sbjct: 187 VRAGRQCTDLMCVYYERHFSEDLEQVRRKWGIIPAPQHPK 226

[Close]
BLAST of CmoCh12G000860 vs. ExPASy Swiss-Prot
Match: Q16FT5 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Aedes aegypti OX=7159 GN=AAEL014646 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.1e-51
Identity = 94/214 (43.93%), Postives = 137/214 (64.02%), Query Frame = 0 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           +I+L + Q+  ++ GS++ AL+DPRR D+IA LGETTG P+ E + ++M+ SDEGR +L 
Sbjct: 55  QIKLTELQRVILSAGSSIAALVDPRRHDMIACLGETTGVPALENIRDQMRNSDEGRQILE 114

Query: 65  ERPRVLSSEVG--HAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 124
           ++PR+ +  V       LP NTFG  Y +FM     +PD R  V+FMD  EL YV  R R
Sbjct: 115 DKPRINTRTVNMDALKKLPENTFGYQYVSFMEKYEITPDSRMEVKFMDDPELAYVMTRYR 174

Query: 125 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 184
           E HD  HT+FG+PTN++GE A+K +E   + LPMC    + G  R   KQR  +   Y P
Sbjct: 175 ETHDLVHTVFGMPTNMLGEVAIKWVEAINIGLPMCYGGAIFGAFRLRPKQRQNYLQRYLP 234

Query: 185 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGI 217
           WA+RAG R   LMC+Y+E+ + +D++++R +  I
Sbjct: 235 WALRAGQRARPLMCVYWEKRWEQDIEELRKELNI 268

[Close]
BLAST of CmoCh12G000860 vs. ExPASy Swiss-Prot
Match: B3M6C8 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila ananassae OX=7217 GN=GF24309 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.4e-48
Identity = 88/214 (41.12%), Postives = 136/214 (63.55%), Query Frame = 0 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           RI+++ +Q+  +  GS++ ALLDPRR D+IA LGETTG+ + E +L+ M+ S+EG+ ++ 
Sbjct: 47  RIEISPFQRVILGAGSSIAALLDPRRHDMIACLGETTGEGALENILDTMQASEEGQRIMA 106

Query: 65  ERPRVLSSEVGHAW--DLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 124
           E+PR+ +S +       LP+++FG+AY  F+     +PD R  VRF++  +L Y+  R R
Sbjct: 107 EKPRIHTSTIDFKLLESLPADSFGAAYVKFLKDNQVTPDSRMAVRFLEDPKLAYLMTRYR 166

Query: 125 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 184
           E HD  HT+ G+PTN++GE A+K +E     LPMC    + G  R   KQR  +  HY P
Sbjct: 167 ECHDLIHTVLGMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLP 226

Query: 185 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGI 217
           WA+  G R   LM +Y+E+ + + L D+RA+ GI
Sbjct: 227 WALENGKRSKPLMPVYWEKRWEQKLQDLRAELGI 260

[Close]
BLAST of CmoCh12G000860 vs. ExPASy Swiss-Prot
Match: B3NHV5 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila erecta OX=7220 GN=GG15811 PE=3 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 6.0e-46
Identity = 84/214 (39.25%), Postives = 136/214 (63.55%), Query Frame = 0 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           RI+++ +Q+  +A GS++ ALLDPRR D+IA LGETTG+ +   +L+ M+ S+EG+ ++ 
Sbjct: 49  RIEISPFQRVFLAAGSSIAALLDPRRHDMIACLGETTGEDALWTILDSMQASEEGQRIMA 108

Query: 65  ERPRVLSSEVGHAW--DLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 124
           ++PR+ +S +   +   LP +TFG+AY  F+     +PD R  VRF++  +L Y+  R R
Sbjct: 109 DKPRIHTSTIDFKYLETLPPDTFGAAYVKFLKDNQVTPDSRMAVRFLEEPKLAYLMTRYR 168

Query: 125 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 184
           E HD  HT+  +PTN++GE ++K +E     LPMC    + G  R   KQR  +  HY P
Sbjct: 169 ECHDLIHTVLDMPTNMLGEVSVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLP 228

Query: 185 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGI 217
           WA+  G R   LM +Y+E+ + +++ D+R++ GI
Sbjct: 229 WALENGKRTKPLMPVYWEKRWEQNIHDLRSELGI 262

[Close]
BLAST of CmoCh12G000860 vs. ExPASy Swiss-Prot
Match: B4PJV6 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila yakuba OX=7245 GN=GE22150 PE=3 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 2.3e-45
Identity = 83/214 (38.79%), Postives = 135/214 (63.08%), Query Frame = 0 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           RI+++ +Q+  +  GS++ ALLDPRR D+IA LGETTG+ +   +L+ M+ S+EG+ ++ 
Sbjct: 49  RIEISPFQRVFLGAGSSIAALLDPRRHDMIACLGETTGEDALLTILDTMQASEEGQRIMA 108

Query: 65  ERPRVLSSEVGHAW--DLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 124
           ++PR+ +S +   +   LP +TFG+AY  F+     +PD R  VRF++  +L Y+  R R
Sbjct: 109 DKPRIHTSTIDFKYLETLPPDTFGAAYVKFLKDNQVTPDSRMAVRFLEDPKLAYLMTRYR 168

Query: 125 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 184
           E HD  HT+  +PTN++GE A+K +E     LPMC    + G  R   KQR  +  HY P
Sbjct: 169 ECHDLIHTVLDMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLP 228

Query: 185 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGI 217
           WA+  G R   LM +Y+E+ + +++ ++R++ GI
Sbjct: 229 WALENGKRSKPLMPVYWEKRWEQNIHELRSELGI 262

[Close]
BLAST of CmoCh12G000860 vs. ExPASy TrEMBL
Match: A0A6J1GJM7 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111454470 PE=3 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.0e-129
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0 

Query: 1   MVGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGR 60
           MVGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGR
Sbjct: 1   MVGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGR 60

Query: 61  AVLLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR 120
           AVLLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR
Sbjct: 61  AVLLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR 120

Query: 121 AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHY 180
           AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHY
Sbjct: 121 AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHY 180

Query: 181 FPWAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPKG 226
           FPWAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPKG
Sbjct: 181 FPWAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPKG 225

[Close]
BLAST of CmoCh12G000860 vs. ExPASy TrEMBL
Match: A0A6J1GIJ1 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111454470 PE=3 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.0e-129
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0 

Query: 1   MVGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGR 60
           MVGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGR
Sbjct: 1   MVGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGR 60

Query: 61  AVLLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR 120
           AVLLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR
Sbjct: 61  AVLLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR 120

Query: 121 AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHY 180
           AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHY
Sbjct: 121 AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHY 180

Query: 181 FPWAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPKG 226
           FPWAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPKG
Sbjct: 181 FPWAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPKG 225

[Close]
BLAST of CmoCh12G000860 vs. ExPASy TrEMBL
Match: A0A6J1KM27 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111496490 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.8e-125
Identity = 218/225 (96.89%), Postives = 221/225 (98.22%), Query Frame = 0 

Query: 1   MVGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGR 60
           MVGVRIQLNKWQQAAVA GSAVGALLDPRRADLIAALGETTGKP+FERVLERMKRS EGR
Sbjct: 1   MVGVRIQLNKWQQAAVAFGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKRSAEGR 60

Query: 61  AVLLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR 120
           AVLLERPRVLSSEVG AWDLPSNTFG+AYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR
Sbjct: 61  AVLLERPRVLSSEVGDAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR 120

Query: 121 AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHY 180
           AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFF HY
Sbjct: 121 AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFQHY 180

Query: 181 FPWAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPKG 226
           FPWAIRAGMRCNDLMC+YYERHFHEDLDDVRAKWGIIPAPPSPKG
Sbjct: 181 FPWAIRAGMRCNDLMCVYYERHFHEDLDDVRAKWGIIPAPPSPKG 225

[Close]
BLAST of CmoCh12G000860 vs. ExPASy TrEMBL
Match: A0A6J1KR89 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111496490 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 8.7e-125
Identity = 217/224 (96.88%), Postives = 220/224 (98.21%), Query Frame = 0 

Query: 1   MVGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGR 60
           MVGVRIQLNKWQQAAVA GSAVGALLDPRRADLIAALGETTGKP+FERVLERMKRS EGR
Sbjct: 1   MVGVRIQLNKWQQAAVAFGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKRSAEGR 60

Query: 61  AVLLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR 120
           AVLLERPRVLSSEVG AWDLPSNTFG+AYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR
Sbjct: 61  AVLLERPRVLSSEVGDAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMR 120

Query: 121 AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHY 180
           AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFF HY
Sbjct: 121 AREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFQHY 180

Query: 181 FPWAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPK 225
           FPWAIRAGMRCNDLMC+YYERHFHEDLDDVRAKWGIIPAPPSPK
Sbjct: 181 FPWAIRAGMRCNDLMCVYYERHFHEDLDDVRAKWGIIPAPPSPK 224

[Close]
BLAST of CmoCh12G000860 vs. ExPASy TrEMBL
Match: A0A1S3BDF6 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103488460 PE=3 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 5.0e-120
Identity = 208/220 (94.55%), Postives = 215/220 (97.73%), Query Frame = 0 

Query: 3   GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAV 62
           GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKP+FERVLERMKRS EGRAV
Sbjct: 4   GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKRSAEGRAV 63

Query: 63  LLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 122
           L+ERPRVLSSEVGHAWDLPSNTFG AYANFMGSRNFSPDDRPPVRFMDT+ELEYVAMRAR
Sbjct: 64  LIERPRVLSSEVGHAWDLPSNTFGGAYANFMGSRNFSPDDRPPVRFMDTEELEYVAMRAR 123

Query: 123 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 182
           EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFN+KQR LFF HYFP
Sbjct: 124 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNEKQRKLFFQHYFP 183

Query: 183 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPS 223
           W+IRAGM+C DLMCIYYERHFHEDL+DVRAKWGIIPAPPS
Sbjct: 184 WSIRAGMQCTDLMCIYYERHFHEDLNDVRAKWGIIPAPPS 223

[Close]
BLAST of CmoCh12G000860 vs. TAIR 10
Match: AT2G03690.1 (coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein )

HSP 1 Score: 391.3 bits (1004), Expect = 5.1e-109
Identity = 177/220 (80.45%), Postives = 201/220 (91.36%), Query Frame = 0 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           R+ L++WQQAAVA+GSA+GAL+DPRRADLIAALGETTGKP+FE VLERMK+S+EGRA+LL
Sbjct: 7   RVPLSRWQQAAVAMGSALGALVDPRRADLIAALGETTGKPAFEMVLERMKKSEEGRAILL 66

Query: 65  ERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAREV 124
           ERPRV+S +VGHAWDLP NTFG+AYA FMGSRNFSPDDRPPVRFM+TDEL YVA RAREV
Sbjct: 67  ERPRVVSEQVGHAWDLPENTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVATRAREV 126

Query: 125 HDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFPWA 184
           HD WHTLFGLPTNLIGES+LKVIEFEQM+LPMCMLSV+GGT RFN+KQR++F  HY PWA
Sbjct: 127 HDLWHTLFGLPTNLIGESSLKVIEFEQMYLPMCMLSVIGGTVRFNEKQRSMFLKHYLPWA 186

Query: 185 IRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPK 225
           +RAG +C DLMC+YYERHF EDL+ VR KWGIIPAP  PK
Sbjct: 187 VRAGRQCTDLMCVYYERHFSEDLEQVRRKWGIIPAPQHPK 226

The following BLAST results are available for this feature:
BLAST of CmoCh12G000860 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZPR07.1e-10880.45Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Arabidopsis thali... [more]
Q16FT56.1e-5143.93Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Aedes aegypti OX=... [more]
B3M6C86.4e-4841.12Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila ananas... [more]
B3NHV56.0e-4639.25Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila erecta... [more]
B4PJV62.3e-4538.79Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila yakuba... [more]
BLAST of CmoCh12G000860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GJM72.0e-129100.00Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucurbita moschat... [more]
A0A6J1GIJ12.0e-129100.00Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucurbita moschat... [more]
A0A6J1KM271.8e-12596.89Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucurbita maxima ... [more]
A0A6J1KR898.7e-12596.88Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucurbita maxima ... [more]
A0A1S3BDF65.0e-12094.55Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucumis melo OX=3... [more]
BLAST of CmoCh12G000860 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G03690.15.1e-10980.45coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 famil... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007715Ubiquinone biosynthesis protein Coq4PFAMPF05019Coq4coord: 5..220
e-value: 2.3E-80
score: 269.1
IPR007715Ubiquinone biosynthesis protein Coq4PANTHERPTHR12922UBIQUINONE BIOSYNTHESIS PROTEINcoord: 4..224
NoneNo IPR availablePANTHERPTHR12922:SF9UBIQUINONE BIOSYNTHESIS PROTEIN COQ4 HOMOLOG, MITOCHONDRIALcoord: 4..224
IPR027540Ubiquinone biosynthesis protein Coq4, eukaryotesHAMAPMF_03111Coq4coord: 1..219
score: 31.578442

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G000860.1CmoCh12G000860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006744 ubiquinone biosynthetic process
cellular_component GO:0031314 extrinsic component of mitochondrial inner membrane
cellular_component GO:0005743 mitochondrial inner membrane