CmoCh11G019750 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G019750
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionmultiprotein bridging factor 1B
LocationCmo_Chr11: 13582921 .. 13586329 (+)
RNA-Seq ExpressionCmoCh11G019750
SyntenyCmoCh11G019750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTATTTACTTTTCCCACTCATCTTCTAACCCTAAAGCTCGGCGGCAAATATTTTCCTACCGCACAGAGAGTTGCAGAAACAGGGAGAGGAGACGAAAATGTCTGGAATTGGACCCATTTCACAGGATTGGGAACCTGTTGTCATCAGGAAGAAGGCTCCCAACGCCGCCGCCAAGAAGGACGAGAAAGCTGTAAACGCCGCCCGCCGCGCCGGTGCCGAGATCGAAACCTTAAAGAAATGTTTGCTCCTATTTCCATTTCTCTTTTCTGTTTTATTTCTATTATTCATCATCAATCCTGCAACATTTTTTTCTTGCGTGTTTGTAGAATGATTGTTGATCTTGAATTTGAGATAGTTTTTTTTTTCTTTTACTGGAATGGTGCTCGATTGTGGAAATTTGTTTATCGCTCTTTGATGTTCGCTCGAACTGATAGATGATGAACTAGTTCCATTGTGATTTGTTTGTTGAAATTTGACGTTATCATCGTTTTTTGAATACTGATTGTATTATGACTCGGATACATGTATGAATAGATACATGCGTTGAATGGTCACTTGTAGATACATGTATAGAAACATGTATGAATGGATACATGTAGGTTCATTGGTTCATAATTAAATAGGTGCATGACTTTTGGATAATGAACGGTAATGGAGAATGTCCCGATTTACCTGTATATATGTATGTTGGCATTGGCGGAAGAAGTAGAAAATCAATCAAGCATTCTTTCATTACAAAGTTCTCTTCTCTCAAAGAATTCTACTAAATTTCTCTGTTGTCACCAATACGGGTCATGTGTTCTAGAACTTCTTGTTGAAGATAATATTATAAACATTCTAGAATAAATTAATTTTGCATATGTTTCAACAAGAACAGAAAAAAGAAAGAAAATCAGTTCACTTCAGATGAATTTCTTAGCCACTTATTCCCTTTTCTCCTCTAATTTTTAAATGAAACCACTAATTAAAGCCATTTTTTCCGTATTGTGATTTGTTTTTTCTTTCTTTCTTCAGCTAATGCTGGAACAAATAAAGCTGCCTCTAGCGGTACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAATCTCTCTCGTGAGTACATTACATCTTAATGCCTTTTACAGATAAATGTAGGCGGCACGTTCCAATATTTACAATATCCCTAGTTTTTTTTATCTCTTTTGTGCTATTCGGGGATAGTAACCAATTCCCTAAATCTATGGAGTTCACCTAAAAATTGATTTATCTTATTATTAATCAAGAATTTCGTATAGAGCTAGAAGGACCCTCAGACGTATAGAGCTAGAAGGACCCTCAGACGTATAGAGCTAGAAGGACCCTCAGACGTATAGAGCTAGAAGGACCCTCAGACGTATAGAGCTAGAAGGACCCTCAGAAACTGCAAATACTAATTTATTAAGAACGATATTCCTAATGAAAGACGATGAATCAACCTTAAATTTTGTGGTCTATTTTCTTACCTGACAATATTAATTTCTTGCTAGTGTTGAGATTTATTTTGTTCTCACTATTTTTATTGCGTTCATTATGTATGTATGTATGTATGTTGACTTCAGAAGAGTATTTACTATGTGCTTAGAGAGCATTTCAAACTGTTATGGATACTTTTAGGATAGTAGTTAGGAATTTCATGTTATGTTTCACTTTTTTAGTTTTCTGATGTGAATATCTGCAAATTATGTAATATTGAAATTTGGTAAGTATCTTTCATTGATTAGAATGTAATATACTTCGATCCTCTGTGACTTGTTTAGCATTGGATGTTGCATAGGCCAAACCAAAAATGAAAATGAAACTTTTTGTAAAAGGGAAAATATTTTTGGAATTTATGGTCAAGTCCTTGTATCCCTTTTAACACGGTCATGAGAAGAAAGTGTTTGTTAGTGTAACAGCTCAAGCCCAAGGCTAGCAGATATTGTCTTCTTTGGACTTCCTCTCAAGGTTTTTAAAATGCGTGTGCTAGGGACAAGTTTCCACACCCTTATAAAGAATGCTTTGTTCCCTTCTCCAACCGAAATGAGATCTCACAATCCACCCCCCTTTGGGCCCAGCGTTCTTGCTGGCACACTACCCGATGTCTAGCTCTAATACCATTTGTAGCAGTCCAAGCCCACAGCTAGATATTGTCTTTTTTGGACTTTTCCTTTCGAGCTTACCCTCAAGGTTATTAAAATGCGTTTGTTAGGAAGAGGTTTCCACCCCCTTTTATAGAGAATGCTTCGGACCCCTCTCCAATCGATGCGGAATCTCATAGTTAGCCCTAGTGTTGGTAGAAGATCAATCTGCCTTCCAAACAATTTCTTGTTCCTTAAGTGGTAACTGATGCAATTTCCATTAGCTTCAGGATGCTTGCTGGCCCCTTTTTGTATATTAATGAAATATCATTTTCTTATTAGAAGAAAATAATTACAATTCTTTTTAACCTTTTATCATGTACCAAGATCAAGTTTCACAAAGTATACCTATAAATTAGTGAGTATTGTTAAACGACACTTTTGCTCTCGTAGTTTGTATTCAATCTTATACCATATATCCTTTGTTTTTCTTTTAATCGTCCTTTTAGCATTTTTCAAGCTTCCTTGCCTTTTGCTTATGGAAATTAATACAAGCCCAAACTTGTTGTGTCGTGGCTGCTTCTAGAACCTCGAGTTGAGAAACTACAACTTCGAACCATGTCTCACATCGTGAATGCAAGCAATGCTGTGCGAGTTTAATCTTCGCTATAGAGGATTTCTCCTTACTTGCTCTGGATTTATAATAGGAGCTAAACTAACATTTTGGTTTTTCTGCTCATCTACTGTAACCACAGATGAAAAGGTACCAACTGAGCTGAAGAAGGCCATTATGCAGGCTCGAACAGATAAGAAGCTCACTCAGTCTCAGCTTGCTCAAGTATGTATCATTTCTGTTCATGCTTTTGCCCACTTCATTTGCATTTTCTTTACAAACCTTACCGACGACGCCTGCCCCGCACAGGGCCAGGTTGGTTACTGGCCATATTCTTCTTTGAGCTTGGTAACAGAGACGTGATGAGCTTTTGTTTGTTTGTTTTTGGCTTTTAGTTGATCAATGAGAAGCCACAAATCATTCAGGAGTACGAATCTGGCAAAGCCATTCCAAATCAACAAATAATCACCAAGCTTGAGAGAGCTCTTGGAACTAAGCTTCGTGGAAAAAAGTAGGAGGGCTTATTAGGCCCTTTGGTTATTATGTAAGTGGTGAATTTGGCTATAACAAGAGCTTTTGGCTTCAGATATTGTGTAGTGTGAATTGGCTTTACTTTGATTTCTCATGAACACACTTACATTTTCAAGTCGTTTTTTGGGATTATACACTGCAAGAAATAGAACCGTACGGGATAAGATGGTCTCTGCCCAGC

mRNA sequence

TTTCTATTTACTTTTCCCACTCATCTTCTAACCCTAAAGCTCGGCGGCAAATATTTTCCTACCGCACAGAGAGTTGCAGAAACAGGGAGAGGAGACGAAAATGTCTGGAATTGGACCCATTTCACAGGATTGGGAACCTGTTGTCATCAGGAAGAAGGCTCCCAACGCCGCCGCCAAGAAGGACGAGAAAGCTGTAAACGCCGCCCGCCGCGCCGGTGCCGAGATCGAAACCTTAAAGAAATCTAATGCTGGAACAAATAAAGCTGCCTCTAGCGGTACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAATCTCTCTCATGAAAAGGTACCAACTGAGCTGAAGAAGGCCATTATGCAGGCTCGAACAGATAAGAAGCTCACTCAGTCTCAGCTTGCTCAATTGATCAATGAGAAGCCACAAATCATTCAGGAGTACGAATCTGGCAAAGCCATTCCAAATCAACAAATAATCACCAAGCTTGAGAGAGCTCTTGGAACTAAGCTTCGTGGAAAAAAGTAGGAGGGCTTATTAGGCCCTTTGGTTATTATGTAAGTGGTGAATTTGGCTATAACAAGAGCTTTTGGCTTCAGATATTGTGTAGTGTGAATTGGCTTTACTTTGATTTCTCATGAACACACTTACATTTTCAAGTCGTTTTTTGGGATTATACACTGCAAGAAATAGAACCGTACGGGATAAGATGGTCTCTGCCCAGC

Coding sequence (CDS)

ATGTCTGGAATTGGACCCATTTCACAGGATTGGGAACCTGTTGTCATCAGGAAGAAGGCTCCCAACGCCGCCGCCAAGAAGGACGAGAAAGCTGTAAACGCCGCCCGCCGCGCCGGTGCCGAGATCGAAACCTTAAAGAAATCTAATGCTGGAACAAATAAAGCTGCCTCTAGCGGTACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAATCTCTCTCATGAAAAGGTACCAACTGAGCTGAAGAAGGCCATTATGCAGGCTCGAACAGATAAGAAGCTCACTCAGTCTCAGCTTGCTCAATTGATCAATGAGAAGCCACAAATCATTCAGGAGTACGAATCTGGCAAAGCCATTCCAAATCAACAAATAATCACCAAGCTTGAGAGAGCTCTTGGAACTAAGCTTCGTGGAAAAAAGTAG

Protein sequence

MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGTSLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIITKLERALGTKLRGKK
Homology
[Close]
BLAST of CmoCh11G019750 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.5e-60
Identity = 121/142 (85.21%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPI+QDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IET++K NAGTNKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+ LDD+TENL+HE+VPTELKKAIMQARTDKKLTQSQLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of CmoCh11G019750 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.0e-60
Identity = 120/142 (84.51%), Postives = 137/142 (96.48%), Query Frame = 0 

Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPI+QDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IET++K NAG+NKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+KLDD+TENLSH++VPTELKKAIMQAR +KKLTQSQLA LINEKPQ+IQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of CmoCh11G019750 vs. ExPASy Swiss-Prot
Match: Q9LV58 (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 66/139 (47.48%), Postives = 100/139 (71.94%), Query Frame = 0 

Query: 5   GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT--SL 64
           G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T+KK +AG+NK   S     +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIP 124
           NT+KL++ETE  + ++V  E++  I +AR +KK++Q+ LA+ INE+ Q++QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGTKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]
BLAST of CmoCh11G019750 vs. ExPASy Swiss-Prot
Match: Q6GPQ6 (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.9e-28
Identity = 72/133 (54.14%), Postives = 92/133 (69.17%), Query Frame = 0 

Query: 10  DWEPV-VIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGTSLNTRKLD 69
           DW+ V V+RKK P AA  K ++A+ AA+R G E+ET KK +AG NK  +   + NT KLD
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNKQHT--ITRNTAKLD 64

Query: 70  DETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIIT 129
            ETE L H++VP E+ K I Q R  K +TQ  LA  INEKPQ+I +YE GKAIPN Q++ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMG 124

Query: 130 KLERALGTKLRGK 142
           K+ER +G KLRGK
Sbjct: 125 KIERVIGLKLRGK 135

[Close]
BLAST of CmoCh11G019750 vs. ExPASy Swiss-Prot
Match: Q6PBY3 (Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=edf1 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 73/132 (55.30%), Postives = 90/132 (68.18%), Query Frame = 0 

Query: 10  DWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGTSLNTRKLDD 69
           DW+ V + +K  +AA  K ++AV AA+R G  +ET KK  AG NK      + NT KLD 
Sbjct: 5   DWDTVTVLRKKGSAAQSKSKQAVTAAQRKGEAVETSKKWAAGQNK--QHVVTKNTAKLDR 64

Query: 70  ETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIITK 129
           ETE LSH++VP E+ K I Q R +K LTQ  LA  INEKPQII EYE GKAIPN Q++ K
Sbjct: 65  ETEELSHQRVPLEVGKVIQQGRQNKGLTQKDLATKINEKPQIIAEYECGKAIPNNQVMGK 124

Query: 130 LERALGTKLRGK 142
           +ERA+G KLRGK
Sbjct: 125 IERAIGLKLRGK 134

[Close]
BLAST of CmoCh11G019750 vs. ExPASy TrEMBL
Match: A0A6J1JEK2 (multiprotein-bridging factor 1a OS=Cucurbita maxima OX=3661 GN=LOC111486196 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.0e-66
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of CmoCh11G019750 vs. ExPASy TrEMBL
Match: A0A6J1EWB8 (multiprotein-bridging factor 1a OS=Cucurbita moschata OX=3662 GN=LOC111437149 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.0e-66
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of CmoCh11G019750 vs. ExPASy TrEMBL
Match: A0A6J1D2X2 (multiprotein-bridging factor 1a OS=Momordica charantia OX=3673 GN=LOC111016839 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.2e-64
Identity = 136/142 (95.77%), Postives = 141/142 (99.30%), Query Frame = 0 

Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIETLKKSNAGTNKAASS T
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL+H++VPTELKKAIMQARTDKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTDKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of CmoCh11G019750 vs. ExPASy TrEMBL
Match: A0A6J1GKJ7 (multiprotein-bridging factor 1b-like OS=Cucurbita moschata OX=3662 GN=LOC111455121 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.1e-63
Identity = 134/142 (94.37%), Postives = 141/142 (99.30%), Query Frame = 0 

Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPISQDWEP+VIRKKAPNAAAKKDEKAVNAARRAGAEIETL+KSNAGTNKAASS T
Sbjct: 1   MAGIGPISQDWEPIVIRKKAPNAAAKKDEKAVNAARRAGAEIETLRKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of CmoCh11G019750 vs. ExPASy TrEMBL
Match: A0A6J1HZG6 (multiprotein-bridging factor 1b-like OS=Cucurbita maxima OX=3661 GN=LOC111468320 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.8e-63
Identity = 134/142 (94.37%), Postives = 140/142 (98.59%), Query Frame = 0 

Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIET +KSNAGTNKAASS T
Sbjct: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of CmoCh11G019750 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 232.3 bits (591), Expect = 2.5e-61
Identity = 121/142 (85.21%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPI+QDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IET++K NAGTNKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+ LDD+TENL+HE+VPTELKKAIMQARTDKKLTQSQLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of CmoCh11G019750 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 231.5 bits (589), Expect = 4.2e-61
Identity = 120/142 (84.51%), Postives = 137/142 (96.48%), Query Frame = 0 

Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPI+QDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IET++K NAG+NKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+KLDD+TENLSH++VPTELKKAIMQAR +KKLTQSQLA LINEKPQ+IQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of CmoCh11G019750 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-29
Identity = 66/139 (47.48%), Postives = 100/139 (71.94%), Query Frame = 0 

Query: 5   GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT--SL 64
           G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T+KK +AG+NK   S     +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIP 124
           NT+KL++ETE  + ++V  E++  I +AR +KK++Q+ LA+ INE+ Q++QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGTKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]
BLAST of CmoCh11G019750 vs. TAIR 10
Match: AT3G24500.2 (multiprotein bridging factor 1C )

HSP 1 Score: 61.2 bits (147), Expect = 7.6e-10
Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 0 

Query: 5  GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT--SL 64
          G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T+KK +AG+NK   S     +
Sbjct: 7  GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65 NTRKLDDETENLSHEKVPTELKKAIMQAR 92
          NT+KL++ETE  + ++V  E++  + + R
Sbjct: 67 NTKKLEEETEPAAMDRVKAEVRLCLRRWR 95

The following BLAST results are available for this feature:
BLAST of CmoCh11G019750 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SJI83.5e-6085.21Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV... [more]
Q9LXT36.0e-6084.51Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV... [more]
Q9LV582.7e-2847.48Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV... [more]
Q6GPQ67.9e-2854.14Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G... [more]
Q6PBY31.3e-2755.30Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=e... [more]
BLAST of CmoCh11G019750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JEK22.0e-66100.00multiprotein-bridging factor 1a OS=Cucurbita maxima OX=3661 GN=LOC111486196 PE=4... [more]
A0A6J1EWB82.0e-66100.00multiprotein-bridging factor 1a OS=Cucurbita moschata OX=3662 GN=LOC111437149 PE... [more]
A0A6J1D2X23.2e-6495.77multiprotein-bridging factor 1a OS=Momordica charantia OX=3673 GN=LOC111016839 P... [more]
A0A6J1GKJ72.1e-6394.37multiprotein-bridging factor 1b-like OS=Cucurbita moschata OX=3662 GN=LOC1114551... [more]
A0A6J1HZG67.8e-6394.37multiprotein-bridging factor 1b-like OS=Cucurbita maxima OX=3661 GN=LOC111468320... [more]
BLAST of CmoCh11G019750 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G42680.12.5e-6185.21multiprotein bridging factor 1A [more]
AT3G58680.14.2e-6184.51multiprotein bridging factor 1B [more]
AT3G24500.11.9e-2947.48multiprotein bridging factor 1C [more]
AT3G24500.27.6e-1040.45multiprotein bridging factor 1C [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..64
NoneNo IPR availablePANTHERPTHR10245:SF118MULTIPROTEIN BRIDGING FACTOR 1Bcoord: 1..142
NoneNo IPR availablePANTHERPTHR10245ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1coord: 1..142
IPR001387Cro/C1-type helix-turn-helix domainSMARTSM00530mbf_short4coord: 86..141
e-value: 4.3E-10
score: 49.5
IPR001387Cro/C1-type helix-turn-helix domainPFAMPF01381HTH_3coord: 87..138
e-value: 1.8E-12
score: 47.1
IPR001387Cro/C1-type helix-turn-helix domainPROSITEPS50943HTH_CROC1coord: 87..141
score: 12.233327
IPR001387Cro/C1-type helix-turn-helix domainCDDcd00093HTH_XREcoord: 85..138
e-value: 3.80852E-9
score: 47.933
IPR013729Multiprotein bridging factor 1, N-terminalPFAMPF08523MBF1coord: 9..79
e-value: 3.1E-23
score: 82.0
IPR010982Lambda repressor-like, DNA-binding domain superfamilyGENE3D1.10.260.40coord: 71..142
e-value: 2.2E-28
score: 99.6
IPR010982Lambda repressor-like, DNA-binding domain superfamilySUPERFAMILY47413lambda repressor-like DNA-binding domainscoord: 81..138

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G019750.1CmoCh11G019750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding