CmoCh11G019730 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G019730
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein TIC 214
Location	Cmo_Chr11: 13571793 .. 13575704 (+)
RNA-Seq Expression	CmoCh11G019730
Synteny	CmoCh11G019730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGGCATTCCGCGCAGAACTGCAATCTCTGTCTCTCTGCGAGTAGAACGCATTGCCGTAGGCGTCGATCAGCTAATTCGTCATCGTTAAATTGCAGGAAGCCCGAGCGATGAGAGCGACGATCGAGGATGCAGATGCGCGAGGTTTAATGCTTATTCAATCCATTATTTGCCGTGAGGAGAGGATTCCGGTTCAGAAGAATTGACACATTGATGCCTGGTTGACGGCGAATGGCGGCAAACTTCGGAATCGGCACTTCACAGAAACTTATGGAGGTATGAGTTTGAAATTTGTTACTTCGAAGAGTCAAATAGTCTTGTTTAATATTGTTTAGCGTTCGAGAATTGACGGCGATGCCAGTTAGCCATATGGGAAATTGAGAAGTTTCAACTAAATGCTATGAGATTGAAATTTATTGATGTTCATATTTTTTGTTTGAACATTGGCGGCTGTAGCTGTTTCTTACTGCATCATTGCCCTTGAAATCCAATAGGGGAGGAATCATCGTTCCATTATACTCATACTCTCCCTGGACCAAGAAATCTGTGGTTAGTTTAAGTTTTGTCTAAATGAAGCTTATGTCACTAACCATTTGAAATTATCTGTATGCTTGGAACTCTGATCTTTTATTGGTTGTTCTTGTAATGGGATTATATTCTTGAACTTCCCCACTTAAACAACTACAGATCCCAAGTCGTTTGGAGATTGGTTAGAGAGGGGAATGGAACATTTTATGTAAGGATGTAAAAACCTATCTTTAACGGACGTGTTTTAAAACTATAAGGGCGATGACGATATGAAACGGGCCAAAGCGGAATGAGTTCTTCCTTGGAGAATGTCTCATGAGTTTCGCAATACCCATCTGTTTAGAGGTATGTCATCTGTCTAGAAACTCTGGACGTTTTTCATTCTGCATCTTCACTTTTCCAATCCGTGTACTTTTCTGATTTGGTGCTTCATGTGTGCTGTTTCTTGTTTTATTCAATATATTTCATGTAGAGGTGTTCGATTAATGGTTATCCTGCAAATTCTAAATGATGTAATTAACAAGAAATTGAAAATGATGTGCGGAAATCTCTCCCTAACAAACATGTTTTAAAATTACGAGAATGATGGCGAGTGTAACGGACTAAAATAGACAATATTTGCTAGCAGTGGACTTGAACTGTTACTAATAGTATAAGAACTAGGCACCGTGCAGTGTGCCAACGAGAACACTAAGCCCTAAAGAGAGATGAATTGTGAGATCCCACATTAGTTGGAGAGGGGAACAAAATATTTGTTATAAGAGTGTGAAAACTTCTTCCTAGTAGATACGTTCTTAAATCGTGAGGCTGATGACGATATGTAACGGATCAAAGTGAACCATATCTGCTAGCAGTGGGCTTGAGCTGTTACAGAAAAAGTGATGGAGTGATGGAGAGTCATCCGTTCGAACTCCCAAATGGATTAAATCAGTATCTGGGGATATTCAAGTGGCTACAAGGATAGCAAGTTTGCATTTGAATGTTCATCCAATTATCCTAGTTCTCTGTCTAGGCAAGTTAGTTTGTTGATAACGAAGGATTCTAGGTTGACTCAACCTTAAAAGGTGGTCAGGTTTATACATTGAAACCATGATTAATGTTGCCATATGGGATGAAATCTTCCGTCTGACTTTACATCTAAAGCTCATCCAGCTAAAAACTCGCCCTTTACTCTTTAGAACTTGAACAACCTCATAAATTCCGGAAGGTGATGAGATAATCTCATTTTTTTTTTTTCAGAGGTTCTAGTAGAGGCTTATAGATTAAATCTATCATATTTTTATCATCTGGATAATCATTCGGTTATTGTGGTCGGACTCTATTATGGATTTCTAACCACATTTTCTATAGAGCCTTCTTATTTCTTCCTTCTCCGAGCTCGGGTAATGAAAGAAGGAATCGAGAATAAAGTATCAGCAACAATAGATTTTACTACGGGACAGCTCATGATGTTCATATCGATCTATTATGTGCCTCTACATTTAGCATTGGATAGATCTCATACTAGCTTTGTCGTATCTTTTCTTTCCTTTCTTTTTGAACCATCTTTTTTATCATGAATCTACTGTCAGAAAGACTAAAGAGTTTGTTATTCCTGGAACATCTGCATTAGAACGAAGTTTAATGGGTTCCTCAAATGACAGAGAGTGATAAATCTGAAGTGAAAATGATACACAGCTAATCTCAAAGTAAGCAGTGATGTATCTTGATTCCTAAAACAAGGACTAACCATACAATTGCTTTCTAACTAGAACAAGCACTGGCCACGTGCTGATGTCAATCAGGGATTAGGCGTCTGTTAAGTGCAGCTTCAAAGCGACTGCAAGACCTAGCTCTCATCTCTGTACTCATATCATTCTCCGGTGCTGGGTAGTAATCCAACCTTAGTTGTACATCTCGTAGATACGGAATATTAAGCAGAAAATTCATGAAGTGTTCATAAGCTGTTCCGTGTATAAATAGCTTCCTCAGAGTGAGGCACTCTGCTAATAGCCCTGCAGCTGGATGAGATAGGCTCCTCTGGTTGAAACTCCTGTCCTGTGGTGGCCAATAATCAAGCTCTGTAAGTCCTAGGCTACCTATACCATTTAGAAAGAACCTCTCCCACAAGGTGAGATCCATCTGGCCTGATGGGCAGGTTAGCGCATAGCCTATTGTGTCACTACAATCCAACTTCATCTTCGTTAGCTGAGGATATTGTCCAAGGATGTTTAACCCAAATGTATCCATTGGTTTGTGCCGTCCCCGACAGTCCCCTTCCACTTTGATCTGAATCTCTTGCAGAACTGGGCAGTCATCTAAACCAGCTGACTGCAATGGACTCAGGAAATCACCCACTCCAATCCATAGAGACAGATACTCCAAACGATCCCATCTCTTCCATAATTCACTACCATTGCTCTCCATGGAGAAGGAACAGTCAGGTTCAGTGGAGTGCTTGGATCTCTTCCTCTTCCTTGAATATCCGCCATTGTTTTCCCCCTCAAAGAGACTATGAGTTGAACAACTGGTAAGTTCATCAACTTCGTCGAGGTTGAAGTTCCCAAGTTCACAATCTTCTCCAGAGCCTTCCCATACACAATCGACATGAACACGACGAATCCGATCTTGAATTGGCTCTAGAGCTCGCAAAGAAGCTATGGTATGAAGATTATCACAGCATGAAATTTTGACGTCCACGAGAGTTCTCTTGAGCAAACTCACCATTGTCCTCAAACCCTTCATTGTAATTTTCTTACATCCCTCCACTTCGAACTTGGATAACCTCACACATCCCCTACCAATTTCTATCAAACCCATATCAGTTAAATCCGCACAATTCTTGACCGACAGCGATTCAAGCCCTTGACAAAGTGCAATCCCATCGAGCCGTGAACCCACCGCCATGCAGATTCCATGAAACTGCCCAAGCTTAAGACTCCTCAATTTCCGGCATCTAGTGTTCAGAACCTCTAGTGCCGGTCCGCTATCCCGGACATTCTTAGCAACATCCAGAAGCAAGTCCTCTAGCAATGGCAGCCCGGAGAATAGCTCAATTAGAGCAGCTGTGCTAATTCTAGCGTCTTCTGGCGTGAAACCATCGGCGGAGGGGTCTCCTTGGACACTCGCCATTGTCGAAGTATCCGCAAGGTGAAGAAGGCTAAGTCTTGGACAATTAGTAGCTATAGCGGACAGAGTTTCATCTCCTACAAACCCAAAATACCTGGGATCAAACGTGCACGCCATGAGAAGCTGGCTGAGGTTGGGGCAAGCCTCGGTAATGGTTACTATATCCGTCGATTTGAAACCATCAGTGAACGACGTTGTCATCAAATTTAGCTTCGAAATTGATTTAGCTGTCAGGGGATTGGCTAGCAGAACCGGCGGAATGTCCTCAATCCAGTAG

mRNA sequence

TGTGGCATTCCGCGCAGAACTGCAATCTCTGTCTCTCTGCGAGTAGAACGCATTGCCGTAGGCGTCGATCAGCTAATTCGTCATCGTTAAATTGCAGGAAGCCCGAGCGATGAGAGCGACGATCGAGGATGCAGATGCGCGAGGTTTAATGCTTATTCAATCCATTATTTGCCGTGAGGAGAGGATTCCGGTTCAGAAGAATTGACACATTGATGCCTGGTTGACGGCGAATGGCGGCAAACTTCGGAATCGGCACTTCACAGAAACTTATGGAGCGTTCGAGAATTGACGGCGATGCCAAGGTTCTAGTAGAGGCTTATAGATTAAATCTATCATATTTTTATCATCTGGATAATCATTCGGTTATTGTGGTCGGACTCTATTATGGATTTCTAACCACATTTTCTATAGAGCCTTCTTATTTCTTCCTTCTCCGAGCTCGGGTAATGAAAGAAGGAATCGAGAATAAAGTATCAGCAACAATAGATTTTACTACGGGACAGCTCATGATAACTGGGCAGTCATCTAAACCAGCTGACTGCAATGGACTCAGGAAATCACCCACTCCAATCCATAGAGACAGATACTCCAAACGATCCCATCTCTTCCATAATTCACTACCATTGCTCTCCATGGAGAAGGAACAGTCAGGTTCAGTGGAGTGCTTGGATCTCTTCCTCTTCCTTGAATATCCGCCATTAACCTCTAGTGCCGGTCCGCTATCCCGGACATTCTTAGCAACATCCAGAAGCAAGTCCTCTAGCAATGGCAGCCCGGAGAATAGCTCAATTAGAGCAGCTGTGCTAATTCTAGCGTCTTCTGGCGTGAAACCATCGGCGGAGGGGTCTCCTTGGACACTCGCCATTGTCGAAGTATCCGCAAGAGTTTCATCTCCTACAAACCCAAAATACCTGGGATCAAACGTGCACGCCATGAGAAGCTGGCTGAGGTTGGGGCAAGCCTCGGTAATGGTTACTATATCCGTCGATTTGAAACCATCAGTGAACGACGTTGTCATCAAATTTAGCTTCGAAATTGATTTAGCTGTCAGGGGATTGGCTAGCAGAACCGGCGGAATGTCCTCAATCCAGTAG

Coding sequence (CDS)

ATGGCGGCAAACTTCGGAATCGGCACTTCACAGAAACTTATGGAGCGTTCGAGAATTGACGGCGATGCCAAGGTTCTAGTAGAGGCTTATAGATTAAATCTATCATATTTTTATCATCTGGATAATCATTCGGTTATTGTGGTCGGACTCTATTATGGATTTCTAACCACATTTTCTATAGAGCCTTCTTATTTCTTCCTTCTCCGAGCTCGGGTAATGAAAGAAGGAATCGAGAATAAAGTATCAGCAACAATAGATTTTACTACGGGACAGCTCATGATAACTGGGCAGTCATCTAAACCAGCTGACTGCAATGGACTCAGGAAATCACCCACTCCAATCCATAGAGACAGATACTCCAAACGATCCCATCTCTTCCATAATTCACTACCATTGCTCTCCATGGAGAAGGAACAGTCAGGTTCAGTGGAGTGCTTGGATCTCTTCCTCTTCCTTGAATATCCGCCATTAACCTCTAGTGCCGGTCCGCTATCCCGGACATTCTTAGCAACATCCAGAAGCAAGTCCTCTAGCAATGGCAGCCCGGAGAATAGCTCAATTAGAGCAGCTGTGCTAATTCTAGCGTCTTCTGGCGTGAAACCATCGGCGGAGGGGTCTCCTTGGACACTCGCCATTGTCGAAGTATCCGCAAGAGTTTCATCTCCTACAAACCCAAAATACCTGGGATCAAACGTGCACGCCATGAGAAGCTGGCTGAGGTTGGGGCAAGCCTCGGTAATGGTTACTATATCCGTCGATTTGAAACCATCAGTGAACGACGTTGTCATCAAATTTAGCTTCGAAATTGATTTAGCTGTCAGGGGATTGGCTAGCAGAACCGGCGGAATGTCCTCAATCCAGTAG

Protein sequence

MAANFGIGTSQKLMERSRIDGDAKVLVEAYRLNLSYFYHLDNHSVIVVGLYYGFLTTFSIEPSYFFLLRARVMKEGIENKVSATIDFTTGQLMITGQSSKPADCNGLRKSPTPIHRDRYSKRSHLFHNSLPLLSMEKEQSGSVECLDLFLFLEYPPLTSSAGPLSRTFLATSRSKSSSNGSPENSSIRAAVLILASSGVKPSAEGSPWTLAIVEVSARVSSPTNPKYLGSNVHAMRSWLRLGQASVMVTISVDLKPSVNDVVIKFSFEIDLAVRGLASRTGGMSSIQ

Homology

[Close]

BLAST of CmoCh11G019730 vs. ExPASy Swiss-Prot
Match: A9LYF8 (Protein TIC 214 OS=Acorus americanus OX=263995 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-15
Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 33 NLSYFYHLDNHSVIVVGLYYGFLTTFSIEPSYFFLLRARVMKEGIENKVSATIDFTTGQL 92
          NL   Y    +SV+VVGLYYGFLTTFSI PSYFFLLRAR+M+EG E +VSAT  F TGQL
Sbjct: 10 NLGSLYIKIINSVVVVGLYYGFLTTFSIGPSYFFLLRARIMEEGTEREVSATTGFITGQL 69

Query: 93 MI 95
          M+
Sbjct: 70 MM 71

[Close]

BLAST of CmoCh11G019730 vs. ExPASy Swiss-Prot
Match: Q3V4X6 (Protein TIC 214 OS=Acorus calamus OX=4465 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-15
Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 33 NLSYFYHLDNHSVIVVGLYYGFLTTFSIEPSYFFLLRARVMKEGIENKVSATIDFTTGQL 92
          NL   Y    +SV+VVGLYYGFLTTFSI PSYFFLLRAR+M+EG E +VSAT  F TGQL
Sbjct: 10 NLGSLYIKIINSVVVVGLYYGFLTTFSIGPSYFFLLRARIMEEGTEREVSATTGFITGQL 69

Query: 93 MI 95
          M+
Sbjct: 70 MM 71

[Close]

BLAST of CmoCh11G019730 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 9.1e-15
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 43 HSVIVVGLYYGFLTTFSIEPSYFFLLRARVMKEGIENKVSATIDFTTGQLMI 95
          +SV+VVGLYYGFLTTFSI PSY FLLRARVM+EG E KVSAT  F TGQLM+
Sbjct: 20 NSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMM 71

[Close]

BLAST of CmoCh11G019730 vs. ExPASy Swiss-Prot
Match: A0A393 (Protein TIC 214 OS=Coffea arabica OX=13443 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 9.1e-15
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 43 HSVIVVGLYYGFLTTFSIEPSYFFLLRARVMKEGIENKVSATIDFTTGQLMI 95
          +SV+VVGLYYGFLTTFSI PSY FLLRARVM+EG E KVSAT  F TGQLM+
Sbjct: 20 NSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMM 71

[Close]

BLAST of CmoCh11G019730 vs. ExPASy Swiss-Prot
Match: Q7YJS6 (Protein TIC 214 OS=Calycanthus floridus var. glaucus OX=212734 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-14
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 43 HSVIVVGLYYGFLTTFSIEPSYFFLLRARVMKEGIENKVSATIDFTTGQLMI 95
          +SV+VVGLYYGFLTTFSI PSY FLLRARVM+EG E +VSAT  F TGQLMI
Sbjct: 20 NSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMI 71

[Close]

BLAST of CmoCh11G019730 vs. ExPASy TrEMBL
Match: A0A1C7D404 (Protein TIC 214 OS=Robinia pseudoacacia OX=35938 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.7e-13
Identity = 42/52 (80.77%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 43 HSVIVVGLYYGFLTTFSIEPSYFFLLRARVMKEGIENKVSATIDFTTGQLMI 95
          HSVIVVGLYYGFLTTFS+ PSY FLLRARVM+EG E KVSAT  F TGQLM+
Sbjct: 20 HSVIVVGLYYGFLTTFSLGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMM 71

[Close]

BLAST of CmoCh11G019730 vs. ExPASy TrEMBL
Match: A0A7T7CMV8 (Uncharacterized protein OS=Ulmus pumila OX=198266 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.8e-13
Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 0


Query: 43  HSVIVVGLYYGFLTTFSIEPSYFFLLRARVMKEGIENKVSATIDFTTGQLMI 95
           +SV+VVGLYYGFLTTFSI PSY FLLRARVM+EGIE KVSAT  F TGQLM+
Sbjct: 51  NSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGIEKKVSATTGFITGQLMM 102

[Close]

BLAST of CmoCh11G019730 vs. ExPASy TrEMBL
Match: A0A7U0FWR3 (Uncharacterized protein OS=Acorus gramineus OX=55184 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 33  NLSYFYHLDNHSVIVVGLYYGFLTTFSIEPSYFFLLRARVMKEGIENKVSATIDFTTGQL 92
           NL   Y    +SV+VVGLYYGFLTTFSI PSYFFLLRAR+M+EG E +VSAT  F TGQL
Sbjct: 53  NLGSLYIKIINSVVVVGLYYGFLTTFSIGPSYFFLLRARIMEEGTEREVSATTGFITGQL 112

Query: 93  MI 95
           M+
Sbjct: 113 MM 114

[Close]

BLAST of CmoCh11G019730 vs. ExPASy TrEMBL
Match: A0A0B5EJS8 (Hypothetical chloroplast RF19 OS=Acorus gramineus OX=55184 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 33 NLSYFYHLDNHSVIVVGLYYGFLTTFSIEPSYFFLLRARVMKEGIENKVSATIDFTTGQL 92
          NL   Y    +SV+VVGLYYGFLTTFSI PSYFFLLRAR+M+EG E +VSAT  F TGQL
Sbjct: 10 NLGSLYIKIINSVVVVGLYYGFLTTFSIGPSYFFLLRARIMEEGTEREVSATTGFITGQL 69

Query: 93 MI 95
          M+
Sbjct: 70 MM 71

[Close]

BLAST of CmoCh11G019730 vs. ExPASy TrEMBL
Match: A0A4Y5RC57 (Protein TIC 214 OS=Idiospermum australiense OX=13573 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-12
Identity = 42/52 (80.77%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 43 HSVIVVGLYYGFLTTFSIEPSYFFLLRARVMKEGIENKVSATIDFTTGQLMI 95
          +SV+VVGLYYGFLTTFSI PSY FLLRARVM+EG E KVSAT  F TGQLMI
Sbjct: 20 NSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMI 71

[Close]

BLAST of CmoCh11G019730 vs. TAIR 10
Match: ATMG00370.1 (Ycf1 protein )

HSP 1 Score: 75.9 bits (185), Expect = 6.0e-14
Identity = 43/65 (66.15%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 33 NLSYFYHLDNHSVIVVGLYYGFLTTFSIEPSYFFLLRARVM---KEGIENKVSATIDFTT 92
          NL Y      +SV+VVGLYYGFLTTFSI PSY FLLRARVM   +EG E KVSAT  F  
Sbjct: 10 NLVYLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKKVSATTGFIA 69

Query: 93 GQLMI 95
          GQLM+
Sbjct: 70 GQLMM 74

[Close]

BLAST of CmoCh11G019730 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-13
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0


Query: 43 HSVIVVGLYYGFLTTFSIEPSYFFLLRARVM---KEGIENKVSATIDFTTGQLMI 95
          +SV+VVGLYYGFLTTFSI PSY FLLRARVM   +EG E KVSAT  F  GQLM+
Sbjct: 21 NSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMM 75

[Close]

BLAST of CmoCh11G019730 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-13
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0


Query: 43 HSVIVVGLYYGFLTTFSIEPSYFFLLRARVM---KEGIENKVSATIDFTTGQLMI 95
          +SV+VVGLYYGFLTTFSI PSY FLLRARVM   +EG E KVSAT  F  GQLM+
Sbjct: 21 NSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMM 75

[Close]

BLAST of CmoCh11G019730 vs. TAIR 10
Match: AT2G07739.1 (Ycf1 protein )

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-13
Identity = 42/65 (64.62%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 33 NLSYFYHLDNHSVIVVGLYYGFLTTFSIEPSYFFLLRARVM---KEGIENKVSATIDFTT 92
          NL Y      +SV+VVGLYYGFLTTFSI P Y FLLRARVM   +EG E KVSAT  F  
Sbjct: 10 NLVYLCMKIINSVVVVGLYYGFLTTFSIGPFYLFLLRARVMDEGEEGTEKKVSATTGFIA 69

Query: 93 GQLMI 95
          GQLM+
Sbjct: 70 GQLMM 74

The following BLAST results are available for this feature:

BLAST of CmoCh11G019730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A9LYF8	3.1e-15	69.35	Protein TIC 214 OS=Acorus americanus OX=263995 GN=TIC214 PE=3 SV=1	[more]
Q3V4X6	3.1e-15	69.35	Protein TIC 214 OS=Acorus calamus OX=4465 GN=TIC214 PE=3 SV=1	[more]
A6MM95	9.1e-15	78.85	Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1	[more]
A0A393	9.1e-15	78.85	Protein TIC 214 OS=Coffea arabica OX=13443 GN=TIC214 PE=3 SV=1	[more]
Q7YJS6	1.2e-14	78.85	Protein TIC 214 OS=Calycanthus floridus var. glaucus OX=212734 GN=TIC214 PE=3 SV...	[more]

BLAST of CmoCh11G019730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1C7D404	6.7e-13	80.77	Protein TIC 214 OS=Robinia pseudoacacia OX=35938 GN=ycf1 PE=3 SV=1	[more]
A0A7T7CMV8	8.8e-13	80.77	Uncharacterized protein OS=Ulmus pumila OX=198266 GN=ycf1 PE=4 SV=1	[more]
A0A7U0FWR3	1.1e-12	69.35	Uncharacterized protein OS=Acorus gramineus OX=55184 GN=ycf1 PE=4 SV=1	[more]
A0A0B5EJS8	1.1e-12	69.35	Hypothetical chloroplast RF19 OS=Acorus gramineus OX=55184 GN=ycf1 PE=4 SV=1	[more]
A0A4Y5RC57	1.5e-12	80.77	Protein TIC 214 OS=Idiospermum australiense OX=13573 GN=ycf1 PE=3 SV=1	[more]

BLAST of CmoCh11G019730 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00370.1	6.0e-14	66.15	Ycf1 protein	[more]
ATCG01130.1	1.0e-13	72.73	Ycf1 protein	[more]
ATCG01000.1	1.0e-13	72.73	Ycf1 protein	[more]
AT2G07739.1	3.0e-13	64.62	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 44..94 e-value: 1.9E-20 score: 72.4
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 44..95
None	No IPR available	PANTHER	PTHR33163:SF32	PHOTOSYSTEM I ASSEMBLY YCF1-LIKE PROTEIN	coord: 44..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G019730.1	CmoCh11G019730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane