CmoCh11G019080 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCTCACGCTCTCAACATTCTTTGAATGGACAAGAAGAACGCCGCTGCAGCCGGTGTTGATCCGCCGCCGGAGAAATCCTCCTCCGCCGCCACAGGAGCTGAAGAACCGTCGGAGAGTGGGTGGACGGAGTATCTAGAGGATTATTTGTGGTCGGAAATTGAGAGAAAAAGCAGTTTTTTGTGTTGTTCAAGTAGTGGGAGCTGTAGTTGGGACATTTCAGAAGCCAATAAGGAAAAAATCAATGGTTTAAGCCCATTTTGTAGCGTTGGGGAGGTGATTTTGGATGCCCCAAACAAGCTAAGCTTCAAAAAAACAACAACTCAGAGGATTTTTGACGATGATTCCTTAGAAGATACGGCCACTTCTCCTGTTCTAACTCCAAAAGTACCCTTTAATTCTCTCTTTTTCCTCTCATTTTTGCTTTATTTTTCAATTATTTCATTGAATTTTTCTGTTTTAGGTTGCTGATTTGAACGTATGAACAACCCATCTAAATCCTAGGATCGATGAACATGTCGTGATCCGTAACTCCACGGTAATTATAATTATGGGTCAAATAATTTACCTTGTTAGACCCTTTAGATGTAAAAAAAGTAAGATTAAAATTATGGGTTTTGTTCCTTTTTTGTGTTTTTTTTAACCCAATTGAGGATTTTTGTAGGGCAGCAATGGCCATCGGGGAATTATGATTCAAACCCAGAAAAAGCTGCAGAGAAGCAAAGGAAAAAAGGGCTGTGTTTGAGTCCAATTTACATGTAATTTTAGCTCTCAAACTCGCTATTATAATCTATAATTCTCTCGTTTCGTTCGTTGTTTTGGATTATTCGAGTAATCAAGTTTTTTTCTTTCACCCAG ATCTCACGCTCTCAACATTCTTTGAATGGACAAGAAGAACGCCGCTGCAGCCGGTGTTGATCCGCCGCCGGAGAAATCCTCCTCCGCCGCCACAGGAGCTGAAGAACCGTCGGAGAGTGGGTGGACGGAGTATCTAGAGGATTATTTGTGGTCGGAAATTGAGAGAAAAAGCAGTTTTTTGTGTTGTTCAAGTAGTGGGAGCTGTAGTTGGGACATTTCAGAAGCCAATAAGGAAAAAATCAATGGTTTAAGCCCATTTTGTAGCGTTGGGGAGGTGATTTTGGATGCCCCAAACAAGCTAAGCTTCAAAAAAACAACAACTCAGAGGATTTTTGACGATGATTCCTTAGAAGATACGGCCACTTCTCCTGTTCTAACTCCAAAAGTTGCTGATTTGAACGTATGAACAACCCATCTAAATCCTAGGATCGATGAACATGTCGTGATCCGTAACTCCACGGGCAGCAATGGCCATCGGGGAATTATGATTCAAACCCAGAAAAAGCTGCAGAGAAGCAAAGGAAAAAAGGGCTGTGTTTGAGTCCAATTTACATGTAATTTTAGCTCTCAAACTCGCTATTATAATCTATAATTCTCTCGTTTCGTTCGTTGTTTTGGATTATTCGAGTAATCAAGTTTTTTTCTTTCACCCAG ATGGACAAGAAGAACGCCGCTGCAGCCGGTGTTGATCCGCCGCCGGAGAAATCCTCCTCCGCCGCCACAGGAGCTGAAGAACCGTCGGAGAGTGGGTGGACGGAGTATCTAGAGGATTATTTGTGGTCGGAAATTGAGAGAAAAAGCAGTTTTTTGTGTTGTTCAAGTAGTGGGAGCTGTAGTTGGGACATTTCAGAAGCCAATAAGGAAAAAATCAATGGTTTAAGCCCATTTTGTAGCGTTGGGGAGGTGATTTTGGATGCCCCAAACAAGCTAAGCTTCAAAAAAACAACAACTCAGAGGATTTTTGACGATGATTCCTTAGAAGATACGGCCACTTCTCCTGTTCTAACTCCAAAAGTTGCTGATTTGAACGTATGA MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLEDTATSPVLTPKVADLNV Homology
BLAST of CmoCh11G019080 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.6e-06 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 0
BLAST of CmoCh11G019080 vs. ExPASy TrEMBL
Match: A0A6J1ESI7 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111437171 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 3.1e-63 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CmoCh11G019080 vs. ExPASy TrEMBL
Match: A0A6J1JN61 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111486202 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.8e-56 Identity = 116/126 (92.06%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of CmoCh11G019080 vs. ExPASy TrEMBL
Match: A0A6J1C2S1 (uncharacterized protein LOC111007924 OS=Momordica charantia OX=3673 GN=LOC111007924 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20 Identity = 73/128 (57.03%), Postives = 86/128 (67.19%), Query Frame = 0
BLAST of CmoCh11G019080 vs. ExPASy TrEMBL
Match: A0A1S3C0F7 (uncharacterized protein LOC103495585 OS=Cucumis melo OX=3656 GN=LOC103495585 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 6.2e-19 Identity = 71/131 (54.20%), Postives = 84/131 (64.12%), Query Frame = 0
BLAST of CmoCh11G019080 vs. ExPASy TrEMBL
Match: A0A0A0K3L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044250 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 6.4e-16 Identity = 65/121 (53.72%), Postives = 77/121 (63.64%), Query Frame = 0
BLAST of CmoCh11G019080 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 0
BLAST of CmoCh11G019080 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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