CmoCh11G018840 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACGCAAAAGAGGGAACGATGAGTTTTTTGGCCGGAAGATTGGCCGGGAAGGAGGCGGCATACTTCATTCAGGAATCGAAACAAGCGGTCGGCCGCCTTGCTCAGAAGAATGCCGCCCAGAAACCACCGGCACAACCACCGTCTTCGGCCCAGAAACCACCGGACGGTGAATCTCAAGCCGACATTCTTCCAGAGGTTTTGAGGCACTCTCTGCCGTCTAAAATCTTCCGGGAGGAATCGGTGAACTCCAATGGATCCTTCTCTACTTCGAAATGGGTTCTTCCTTCTAACCCTAATTATCGGTCTGTATCTTTGGATGCTCTGAACCCTCTTAGGGCTTTTCTCTCACTTCCCCAGGTTACGTTCGGCCCCAAAAGGTTCGTTTCTGAAGTGGATTAGGGTTTAAGCTTTGATTGAATGAACTGGATTTATTTGCTTTCTTTGTTGTGGATATTGAGAAGGAATTTGGTTTCTGGGACTCTGTATAGCCATTTGCTTTGAATTGAACATACAGTAGGTGGCGCTGGATTCATCTTTTGTTGTCTGATTCCTGGTTTGTCTAATAGGTAGTGCGTTTTGAGTTGTGTTATTGACATTGGGATCTCACAATCTACTCCCTTCGGGGCTCAACATCCTCGTTGGCATTCGTTCCCTTCTCCAATCGATGTGGGATCCCTCAATCTACCCTCCTTTGGGGCTCAATGTCCTTGCTGACACACCGCCTCGTGTCCACTCCCCCTTCAGAGCGAACATCGCTCGGTGTCTGGATTTCTAGCTCTGATACCATTTGTAACAGCACAATCTCACTGCTAGCAAATATTGTCCTCTTTGAGCTTTTCCTTTCAGGTTTCCCTTTATTGTTTTAAAACATGTCTACTAGGGAGAGATTTTCATGCCCTTGTACAAAATGTTTCGTTCTCTTTCCTAACCAATGTGGGATCTCACCATTCACCCCCCTTCGGGACCTAGCGTCCTTGGTGGTACTCGTTCCCTTCTCCAATTGATGTGGGACCCCCCAATCCACCCCCTTTGGGGCCCAACGTCCTCACTGGCACACCGACTTATGCCCACTCCTATTTGGGGTTCAGCCTCTTCGTTGGCACACCGCCTCATGTCCATTTGTAATAGCTCAAGCCCACCGCTAGCAAATAGTGTCCTCTTTGGGCTTTCTTCCAAAGTTTTAAAACGCGTCTGCTAGGAAGACGTTTCCACACCCTTATAAAGGATGCATCGTTCTCTTCCCCAACCGATATGAGATCTCACCGTTTATAACACTTTCTACGGAGTGTTGTTCCATCCTTATTTGTGGACAAGTAAAGAAGGCCTCCTCCCATTTGGCTGGTGGCTTTTATGGCTTGAGGAACATAGGAGAGTTTTGGTGGCTGTGGGACACAACTAAGTTCAATACTTCCCTGTGTCCTTATCTAACATAAGTTAGATAACAACAACCTTTTTCTCTTATCTTCAGGTGGGAATTGCCTCAATACGAAAACTCAGTAGTGGCCTCAACAGCCAACGACTTAAGAACCGACAAGCACACCTCTATTAATCCTAAGAAGTTGAAGGCTGCTGCTGAAGGCCTTACAAATGGTAACCCTCCAAATGAAACAACTCTGTTTCTCTATCCCTCATCCTAATCAGCAGAGCTTTGGTTTCCCATGTAGTTGGAAAGGCATTTGGTGTATCTACTGCGCTTGTCTTTGGTGGCTCCACCTTCATCTTTGGGTTCACCATGTCCAAGCTAGACCTCAACAATGTAAACATGGATTCAACCTCTTATCTCTTCATAATCTTTGTATATGCACATATATTTCCGTTAAACTCGGGTCGTGGAAACGTCGTTTTCGCAGGCCGATGAGATTCAACAAAAAGGAAGAAGCATGTTTGAACCAAAGATAGAGATGGTTAGAGAGCAACTAGCTCCCCTCAAAGTCTGGGTATGTCATTATCATTTGTGATCCACACAGCATTCTCCCCTGTTGCGTGTTCGTTATCTAACCAGGGTTGTTTTTCGAGTTCTAGGCTGATGATATGTCGAAGAAATGGCGTGTTGAGAGAAATGGCGATATGAAAGAGAAGCCTCTCATAAAGGAACTATCAAAGATTTTGGGTTCTAAGACTCCCAACTGAACTGTATAATTTTTCTTGACCTTCTGTTGTTTATCTTGTATGTCTGTAAATGATAAGTGTAGAATGCTACTGCTTGCTAGCTAAGTTTATATAGAAGTTCCATGTTGATTTTATGCCTGAGGTTGAAAATATAAGACGTTCCAAGTTCTTGTCTGCAGCCCGATACACCGCCCAAACCCACTCTTAGCGGATATTGTCCTCTTTGTCTTTCCCTTTCGGGCTTCCCCTTAAGATTTTAAAACACGCTTTCTCACATCACAATCCACCCCATTTGGGTCTCGCTGGGACACTACTAGGTCTCTGGCTCTAATGCCATTTGTCGCGCTCCAAGCAGACAGCTAGCATATATTGTTCTCTTTGTATTTTTCCTTTTGGACTTCCCCTCATGGGTTTACAACACGAGTATCAGGGAGAGGTTTCCACATCCTTGTAAAGAATACTTCGTTCCCCTCTCCACTAGAAGTAATGTAATCGAGCAGAAGGGTTACCTGGGTTCGAGAAGAGGTGAGTTGGGCTTTCATATGAGCTTGAATTCTTGGGTTATGGGGGCTCGCCCACTCTTGGTCTATGAAACAACGATCTTCCTTTTGGGGTTCGCAGGCCGAAGACTGTGCGGTCTGAGATGAACAGAGAACATGGCTGTGGAATTGGAAGATGGTCTATTAATTAAACTTTCAATTTTATAATTATAATCTTTTAATTTTGTGTAATTTTAAAAAATATTTAATAAATACAAATTTATTAGACGAGTGATAATTATTTATTATTTATTTTTTATTTTTAAAATTAATTCTATAAACACATTATTTTAAAACTAAAAACAATAGTTTATTTTTAGAATTTGGCAATATAGTAATTTTAAGAAAAAAAAAATGATTTCTAGAAATAATTTGGAAACTGGTAGTCCCGGTTTCCGGTAAAAACTTCCCGCCACTGACGTGGAAAAGCTGAGCCATTCTGTCGAATTGGATAAACCTTCGCTCGAGGGTTTTAGGGATTGCTTCGACCCTGTAACTTGGATCGTCTTCATTTCTTCAAATTCGCAGGTAATTATCCAAATTTTCTCTATGTTTCTGATTACACCAGCGTAATTTTACCTGCGTTGGTAATCTAGCAATTGATGGAGTTGGAGTATGTTCCATTAATGGATAAAGTTTCCCGTTTCTCCGGGTGGAGGATTTTATCCATCTGAATTTATTTTTCTTTTTCTTTTTCTGTGCCGGTTCAGTTTGATATTGCTTCTTTTATGCATTCTTTAGCCTCTCTATGGTTTTGGTTTGGGGGAATCGTAGGAGAAGGAGAATTTTCGGTGATGGGAAATAGCCATTTCTGCTTACTTGAGCTTGAACTTGTGTGGTTATTTTAGTGGAGTCTGATGCAACTGAAGAAATTTCCGGTGGGAAAATTTGTTCATCAATGCACTGATTCATCTAAAAACATGCCTCTCTATGATTGTGACTGCCTTTCTTAAACCTGCTTATTGGAGATTTGTTATTTTACCTATCAATAATGAAAGTTTCGTGGGTCTGGAATGACACCATAAAGGCTCAATTAGATGTTAGAAATTCTGTATGAATACCCAGAAATAGAACAGAGAAAATCCACGAAGACTGAGAGAGCCCAAGTGCAAACGAGCTGACAAATTAAGTAAATAGTTAAGGTTGTGGAGTAATTATGGTAGCATCTATATGTGGAACATTTTAACACCTCAAAATTTGTATTGATCCTTGCAGA ACGCAAAAGAGGGAACGATGAGTTTTTTGGCCGGAAGATTGGCCGGGAAGGAGGCGGCATACTTCATTCAGGAATCGAAACAAGCGGTCGGCCGCCTTGCTCAGAAGAATGCCGCCCAGAAACCACCGGCACAACCACCGTCTTCGGCCCAGAAACCACCGGACGGTGAATCTCAAGCCGACATTCTTCCAGAGGTTTTGAGGCACTCTCTGCCGTCTAAAATCTTCCGGGAGGAATCGGTGAACTCCAATGGATCCTTCTCTACTTCGAAATGGGTTCTTCCTTCTAACCCTAATTATCGGTCTGTATCTTTGGATGCTCTGAACCCTCTTAGGGCTTTTCTCTCACTTCCCCAGGTTACGTTCGGCCCCAAAAGGTGGGAATTGCCTCAATACGAAAACTCAGTAGTGGCCTCAACAGCCAACGACTTAAGAACCGACAAGCACACCTCTATTAATCCTAAGAAGTTGAAGGCTGCTGCTGAAGGCCTTACAAATGTTGGAAAGGCATTTGGTGTATCTACTGCGCTTGTCTTTGGTGGCTCCACCTTCATCTTTGGGTTCACCATGTCCAAGCTAGACCTCAACAATGCCGATGAGATTCAACAAAAAGGAAGAAGCATGTTTGAACCAAAGATAGAGATGGTTAGAGAGCAACTAGCTCCCCTCAAAGTCTGGGCTGATGATATGTCGAAGAAATGGCGTGTTGAGAGAAATGGCGATATGAAAGAGAAGCCTCTCATAAAGGAACTATCAAAGATTTTGGGAGAAGGAGAATTTTCGGTGATGGGAAATAGCCATTTCTGCTTACTTGAGCTTGAACTTGTGTGA ATGAGTTTTTTGGCCGGAAGATTGGCCGGGAAGGAGGCGGCATACTTCATTCAGGAATCGAAACAAGCGGTCGGCCGCCTTGCTCAGAAGAATGCCGCCCAGAAACCACCGGCACAACCACCGTCTTCGGCCCAGAAACCACCGGACGGTGAATCTCAAGCCGACATTCTTCCAGAGGTTTTGAGGCACTCTCTGCCGTCTAAAATCTTCCGGGAGGAATCGGTGAACTCCAATGGATCCTTCTCTACTTCGAAATGGGTTCTTCCTTCTAACCCTAATTATCGGTCTGTATCTTTGGATGCTCTGAACCCTCTTAGGGCTTTTCTCTCACTTCCCCAGGTTACGTTCGGCCCCAAAAGGTGGGAATTGCCTCAATACGAAAACTCAGTAGTGGCCTCAACAGCCAACGACTTAAGAACCGACAAGCACACCTCTATTAATCCTAAGAAGTTGAAGGCTGCTGCTGAAGGCCTTACAAATGTTGGAAAGGCATTTGGTGTATCTACTGCGCTTGTCTTTGGTGGCTCCACCTTCATCTTTGGGTTCACCATGTCCAAGCTAGACCTCAACAATGCCGATGAGATTCAACAAAAAGGAAGAAGCATGTTTGAACCAAAGATAGAGATGGTTAGAGAGCAACTAGCTCCCCTCAAAGTCTGGGCTGATGATATGTCGAAGAAATGGCGTGTTGAGAGAAATGGCGATATGAAAGAGAAGCCTCTCATAAAGGAACTATCAAAGATTTTGGGAGAAGGAGAATTTTCGGTGATGGGAAATAGCCATTTCTGCTTACTTGAGCTTGAACTTGTGTGA MSFLAGRLAGKEAAYFIQESKQAVGRLAQKNAAQKPPAQPPSSAQKPPDGESQADILPEVLRHSLPSKIFREESVNSNGSFSTSKWVLPSNPNYRSVSLDALNPLRAFLSLPQVTFGPKRWELPQYENSVVASTANDLRTDKHTSINPKKLKAAAEGLTNVGKAFGVSTALVFGGSTFIFGFTMSKLDLNNADEIQQKGRSMFEPKIEMVREQLAPLKVWADDMSKKWRVERNGDMKEKPLIKELSKILGEGEFSVMGNSHFCLLELELV Homology
BLAST of CmoCh11G018840 vs. ExPASy TrEMBL
Match: A0A6J1ERF2 (uncharacterized protein LOC111437124 OS=Cucurbita moschata OX=3662 GN=LOC111437124 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 4.2e-134 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CmoCh11G018840 vs. ExPASy TrEMBL
Match: A0A6J1JKW8 (uncharacterized protein LOC111486122 OS=Cucurbita maxima OX=3661 GN=LOC111486122 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 1.8e-124 Identity = 237/250 (94.80%), Postives = 241/250 (96.40%), Query Frame = 0
BLAST of CmoCh11G018840 vs. ExPASy TrEMBL
Match: A0A1S3C0Z0 (uncharacterized protein LOC103495622 OS=Cucumis melo OX=3656 GN=LOC103495622 PE=4 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 2.1e-109 Identity = 206/250 (82.40%), Postives = 225/250 (90.00%), Query Frame = 0
BLAST of CmoCh11G018840 vs. ExPASy TrEMBL
Match: A0A0A0K240 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041920 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 4.4e-107 Identity = 202/250 (80.80%), Postives = 221/250 (88.40%), Query Frame = 0
BLAST of CmoCh11G018840 vs. ExPASy TrEMBL
Match: A0A6J1C1Z9 (uncharacterized protein LOC111007726 OS=Momordica charantia OX=3673 GN=LOC111007726 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 1.7e-106 Identity = 199/250 (79.60%), Postives = 222/250 (88.80%), Query Frame = 0
BLAST of CmoCh11G018840 vs. TAIR 10
Match: AT1G05060.1 (unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 272.7 bits (696), Expect = 3.2e-73 Identity = 150/258 (58.14%), Postives = 195/258 (75.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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