CmoCh11G018810 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTAATCTTCTGTAGCGTTGCGACTCGAACAGTATCTTAGATTATTAGCGGGGTTAATTCATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACGTATTGTCTCTTTGGGAACAAACATGATTTTTGTTCTTCCTCTTGTTCTTCGTCTTCTTCTTTTGTTTTTGTGTTCAAAGCGACGCTTAATTGGTTTGCATTTTCTGCAATTGCTTTTGGTTGCTTCTGGTGAGTGTTCATTGATTTTTGGAATTGCATTTCTGTGGTTGTTGCAGCTGGTGATTGTGTGTTAATGCGACCGTCCGACTCCGATAAGCCTCCATACGTTGCTCGCGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTGAGTTCTATGGTGTACCTTGTTCCTTACATGTTTCTACTAAAGCAATCTCATGTTGGTAATTATATAAGAAAATTTGTGGTTTATCTGTGTTTTGGGTTCTTTTTTTTAATTGCAGGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTAATCTCAACCTACTTTTGCAGCTATGTGCTTTGTTTCCTTGGGTGCAAATTTAGGGAGGATAATCTGATGCTTGCTTGTTTTATAACTTCGTTATGTAGCTTTTGTTTGGAGATAGTGTCGTGTTGTTCACCCGTTGCAGGCTATTATATGTCGGTTTTTCTTGGAATTTTAAAGATAGGCACTCTGTTCAATAACTTGTTGTGCCATTGTTAGGGTGATGCACCAAAATGTGAACAAGAATGTGGAGATGGAAAGCCTTGTTTTCTCGTCCTCTCTAAACTAACATATATGTTTTGCAGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTAAGGGATGTTGATTCATCTTTACATGAGAGAAATACTGCTAAAATCGTATGACTTATGTTAAAATGTAGAGGAGCTGCAGAATTACTTGAGAACATTATGTGCCTCTTCTGGTCAAACCATTAGAAATTCAATAACTGGTATGCCTATAAGCAAAGTGATGATGTTGGCAAGAAATGCCAATAAAAGAAATCTAACATTTATGCTTTTGCTAAATTTTATTATCATGGAGATTTTTTGTGTAGACTACTGAATTCTCGTTATGTGCTGCTAGGCTGAAGTTTGAAGTCCTATTAGGGTAATTCTTGTATGCATTCTGTGAGATCCCACATCAATTGGAGAGAAGCATTCTTTTAAGGATGTGGAAACCTATCCCTAGCAGATGCGTTTAAAAACTTTGAGGGAGCCCAAAAAGGAAAACCCAAAGAGGACAATATTTGCTAATGGTGGGTTTGGGCCGTAACACATTCTATGAAACTTGCTTTGGGAAACTCATTGCATAATATAGGTCTTGAACACAATTTGGTTTAGGTTGATTGATAACTTCATTTTAGTTGGTACTCCTTTGTCTCTAACTGGATAGTGGTACTGTATTTATGCTTATTTGGTTAGGTTGCAATCAATAAAATATGAAATGACACATAATTGAAGTTGATTAATTGATGTGCACTAGAAGGCACATTCAAACCTTTTGTTTTGCCTAGGAATACTCTTCCCTCCCGGACTGCCCTTTGTGCACGAGTAGTTCACATTTGGTGCTACATTTTCTTCTTGATGACTTTGGTTGTATTGGAGCTCTAAAGTTTGTCGTTTTTAAGCAACTCTGAGTCGACTATTGGAGCTCTAAAGTTACCATGTTGTTTCAAGTTTTTAAGCAACTCTTGACGACTTCGTTTTAAGTTTCTCTGAGTCGACTATTGGAACTCTGAGTCAACTCTGTGTTGAACATAGTGTAGTATTAGTGAACAACTGATTTGGGACAATCCCCAATGTTTGGTGTAAAAGGGTCAGAGGCAGTGTAACACACTGAATTTCTGTCTCGTGCTCTCTGGTTTTTATTTATTGTGAAAGGATTTAGGCAATGAAACAGAAATATGGATTCTCATGTTGAATTCTCATGCTAGGTGGAACCAAAGCGTCGGAAGAGATGATTGGCTGATGAAGGTTCATGGAAGTGACAAGGAGGTGCGATTTCCTGCGCCTTTAGTTTCTGTTAATGTCGATGTTGTGGAAATGTACAGTGAAGATAAGATATTGTGCTCGCACAAACCAGAGGTTCTTTTTTTTAAAACTACAATGTTCAAATACATTTACGTGTGCTAA TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTAATCTTCTGTAGCGTTGCGACTCGAACAGTATCTTAGATTATTAGCGGGGTTAATTCATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACCTGGTGATTGTGTGTTAATGCGACCGTCCGACTCCGATAAGCCTCCATACGTTGCTCGCGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGACTACTGAATTCTCGTTATGTGCTGCTAGGCTGAAGTTTGAAGTCCTATTAGGGTGGAACCAAAGCGTCGGAAGAGATGATTGGCTGATGAAGGTTCATGGAAGTGACAAGGAGGTGCGATTTCCTGCGCCTTTAGTTTCTGTTAATGTCGATGTTGTGGAAATGTACAGTGAAGATAAGATATTGTGCTCGCACAAACCAGAGGTTCTTTTTTTTAAAACTACAATGTTCAAATACATTTACGTGTGCTAA ATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACCTGGTGATTGTGTGTTAATGCGACCGTCCGACTCCGATAAGCCTCCATACGTTGCTCGCGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGACTACTGAATTCTCGTTATGTGCTGCTAGGCTGAAGTTTGAAGTCCTATTAGGGTGGAACCAAAGCGTCGGAAGAGATGATTGGCTGATGAAGGTTCATGGAAGTGACAAGGAGGTGCGATTTCCTGCGCCTTTAGTTTCTGTTAATGTCGATGTTGTGGAAATGTACAGTGAAGATAAGATATTGTGCTCGCACAAACCAGAGGTTCTTTTTTTTAAAACTACAATGTTCAAATACATTTACGTGTGCTAA MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKTTEFSLCAARLKFEVLLGWNQSVGRDDWLMKVHGSDKEVRFPAPLVSVNVDVVEMYSEDKILCSHKPEVLFFKTTMFKYIYVC Homology
BLAST of CmoCh11G018810 vs. ExPASy Swiss-Prot
Match: F4JL28 (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 4.0e-103 Identity = 168/207 (81.16%), Postives = 191/207 (92.27%), Query Frame = 0
BLAST of CmoCh11G018810 vs. ExPASy Swiss-Prot
Match: Q9FEN9 (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 1.3e-77 Identity = 135/199 (67.84%), Postives = 156/199 (78.39%), Query Frame = 0
BLAST of CmoCh11G018810 vs. ExPASy Swiss-Prot
Match: F4JGB7 (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2) HSP 1 Score: 271.6 bits (693), Expect = 1.1e-71 Identity = 142/230 (61.74%), Postives = 167/230 (72.61%), Query Frame = 0
BLAST of CmoCh11G018810 vs. ExPASy Swiss-Prot
Match: Q9P281 (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC1 PE=1 SV=4) HSP 1 Score: 65.9 bits (159), Expect = 8.9e-10 Identity = 38/125 (30.40%), Postives = 59/125 (47.20%), Query Frame = 0
BLAST of CmoCh11G018810 vs. ExPASy Swiss-Prot
Match: Q3UHR0 (BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahcc1 PE=1 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09 Identity = 40/125 (32.00%), Postives = 59/125 (47.20%), Query Frame = 0
BLAST of CmoCh11G018810 vs. ExPASy TrEMBL
Match: A0A5D3C9X7 (Chromatin remodeling protein EBS-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004500 PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 7.8e-142 Identity = 251/302 (83.11%), Postives = 265/302 (87.75%), Query Frame = 0
BLAST of CmoCh11G018810 vs. ExPASy TrEMBL
Match: A0A6J1JN00 (chromatin remodeling protein EBS-like OS=Cucurbita maxima OX=3661 GN=LOC111486148 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 3.4e-121 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of CmoCh11G018810 vs. ExPASy TrEMBL
Match: A0A6J1ESB9 (chromatin remodeling protein EBS-like OS=Cucurbita moschata OX=3662 GN=LOC111437125 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 3.4e-121 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of CmoCh11G018810 vs. ExPASy TrEMBL
Match: A0A7J6HIS8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_018649 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 5.4e-119 Identity = 211/273 (77.29%), Postives = 232/273 (84.98%), Query Frame = 0
BLAST of CmoCh11G018810 vs. ExPASy TrEMBL
Match: A0A6J1C3E6 (chromatin remodeling protein EBS-like OS=Momordica charantia OX=3673 GN=LOC111007999 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 1.6e-118 Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of CmoCh11G018810 vs. TAIR 10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 375.9 bits (964), Expect = 2.9e-104 Identity = 168/207 (81.16%), Postives = 191/207 (92.27%), Query Frame = 0
BLAST of CmoCh11G018810 vs. TAIR 10
Match: AT4G22140.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 375.9 bits (964), Expect = 2.9e-104 Identity = 168/207 (81.16%), Postives = 191/207 (92.27%), Query Frame = 0
BLAST of CmoCh11G018810 vs. TAIR 10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 291.2 bits (744), Expect = 9.2e-79 Identity = 135/199 (67.84%), Postives = 156/199 (78.39%), Query Frame = 0
BLAST of CmoCh11G018810 vs. TAIR 10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 259.2 bits (661), Expect = 3.9e-69 Identity = 127/194 (65.46%), Postives = 150/194 (77.32%), Query Frame = 0
BLAST of CmoCh11G018810 vs. TAIR 10
Match: AT4G39100.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 247.7 bits (631), Expect = 1.2e-65 Identity = 115/163 (70.55%), Postives = 130/163 (79.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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