CmoCh11G018390 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G018390
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr11: 12840452 .. 12840954 (-)
RNA-Seq ExpressionCmoCh11G018390
SyntenyCmoCh11G018390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAGTAGGTAAAAGTGGTGTTGAAATTAAAATAAATAAATAAATAAGAAAAGAAAAGAAAAGTAAATTGGAATGATAATAGGTTCGTAAATTAGTAATATATAAATGATAGCATCAAGGAATTTTGGAAGCGGAAGCTTGTGCGTTACCAAACAACGGCCATAGAATATGCTCTTAGCTGTTACCAACTTTGCCGGGAACTTCATCGGACGCCTCTCAGCCGGAGCTCCAATCACTGCTTCTCAACTGTAACCATTTCAATTTTACTTCTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCACTGCACCTTCTTCTCCATCGGAGGTTGAATTTGACTTCCATTTATTCTCTTCTTCACTGACTTAGCTCGTCTTCTGCAGCTCTCAATCGCCTGCTCGAATTCCGAGGCTGGATTCTTAATTGACGGTTGTGACTATTTTCTGGCGGAATTCTGTCCTTCCAAGTCAAATTACTACACCTGTGTGCTTTTCTAG

mRNA sequence

ATGATTAGTAGCATCAAGGAATTTTGGAAGCGGAAGCTTGTGCGTTACCAAACAACGGCCATAGAATATGCTCTTAGCTGTTACCAACTTTGCCGGGAACTTCATCGGACGCCTCTCAGCCGGAGCTCCAATCACTGCTTCTCAACTCTCTCAATCGCCTGCTCGAATTCCGAGGCTGGATTCTTAATTGACGGTTGTGACTATTTTCTGGCGGAATTCTGTCCTTCCAAGTCAAATTACTACACCTGTGTGCTTTTCTAG

Coding sequence (CDS)

ATGATTAGTAGCATCAAGGAATTTTGGAAGCGGAAGCTTGTGCGTTACCAAACAACGGCCATAGAATATGCTCTTAGCTGTTACCAACTTTGCCGGGAACTTCATCGGACGCCTCTCAGCCGGAGCTCCAATCACTGCTTCTCAACTCTCTCAATCGCCTGCTCGAATTCCGAGGCTGGATTCTTAATTGACGGTTGTGACTATTTTCTGGCGGAATTCTGTCCTTCCAAGTCAAATTACTACACCTGTGTGCTTTTCTAG

Protein sequence

MISSIKEFWKRKLVRYQTTAIEYALSCYQLCRELHRTPLSRSSNHCFSTLSIACSNSEAGFLIDGCDYFLAEFCPSKSNYYTCVLF
Homology
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BLAST of CmoCh11G018390 vs. NCBI nr
Match: KAG6589109.1 (WRKY transcription factor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.8 bits (338), Expect = 3.5e-28
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 1  MISSIKEFWKRKLVRYQTTAIEYALSCYQLCRELHRTPLSRSSNHCFSTLSIACSNSEAG 60
          MISSIKEFWKRKLVRYQTTAIEYALSCYQLCRELHRTPLSRSSNHCFSTLSIACSNSEAG
Sbjct: 1  MISSIKEFWKRKLVRYQTTAIEYALSCYQLCRELHRTPLSRSSNHCFSTLSIACSNSEAG 60

Query: 61 FLIDGCD 68
          FLIDG +
Sbjct: 61 FLIDGLE 67

The following BLAST results are available for this feature:
BLAST of CmoCh11G018390 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh11G018390 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh11G018390 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589109.13.5e-2897.01WRKY transcription factor 1, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CmoCh11G018390 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G018390.1CmoCh11G018390.1mRNA