CmoCh11G018120 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G018120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transmembrane emp24 domain-containing protein p24beta2-like
Location	Cmo_Chr11: 12703976 .. 12707789 (-)
RNA-Seq Expression	CmoCh11G018120
Synteny	CmoCh11G018120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGTGGGGGTATTGCTGCTGAATTTGAGAAGATCAGAAGGGATTAGGTTTGTGATAGACAGGGAAGAATGTTTCTCTCATAATGTTCAATATGAGGGAGATACTGTTCATGTTTCTTTTGTTGTAATCAAGGCAGATTCAGCATGGCACTATGGCGATGATGGTGTTGATCTTGTGGTATCATTCTTTCCTCCATTTTATTTGCTTTTGTTTTGTTTAGCTTGTTATAAAAAAAAACTTGAAACTGGGTGTAGGAGTCCAAGTCTACCCCGGTAGATATTGTTCTTTTTGGGCTTTACCTTCCGAGCTTCCCCTCATAGTTTGTAAAACGCATCTACTAGGGGAGGTTTTCACGTCCTTGTAAGGAATGCTTCGTGCCCCTCTTCAATTGACGTGGAATCTCACAATCCACCTCCCTTGGGGGCTAGGGTCCTCGCTGGCACATCTCTCGATGTCTGGCTCTAATAACATTCTATCACGACCCTATCTCACTACTAGCAAATATTGTCATTTTTTGGGTTTTCCCTTTTGTGTTTTCCCTCAAGGTTTTTAAAATGATCTACTAGGGAGATGTTTCCACACCACCCTTATAAAGAATGCTTCATTCCTTTCTCCAACTAATGTGGAATCTCACAATCCACCTCCCTTGGGGGCGAGGGTCCTCGCTGGCACACCTCCCCTCCCGATGTATGGCTTTAATACCATTCTGTCACGACCCAATCCCAACGTTCAGATATTGTCCTTTTTGGAATTTTCCTTTCAAGGTTCCTCTCAAGGTTTTTAAAATGCATCTACTAGGGAGGGGTTTCCACACCCTTATAAGGAATGCTTTGTTCTCCTCTCCAACCGCATCTACTAGGGAGAGGTTTCCACATCCTTATAAGAAATGTTTCGTTCCCCTCTCCAACCAACGTGGAATCTCACATCGGACTAGCAAGGTTTTGTGTTTCTGTTGTTATCTGTTATGTTTGAGAAATGTTATTCTTAATTCTTGTCTCATGAAAATGGTGGGGAGTGGCGTCTTGGTGTTGTTGGGCAAGGACTTATGTTTTGATTTGACTGGAGAGAGAGAGAGATCCTAATGATAAAAGTTACATCCAGGCTTTTGGGTGCTAGAAGACGTAGAACATGTTTGGAATGACTTCTCAAGTGCTTAAAATACTTTTTCAACGCTTAAAAATCCTTTTATATGCATTTAGAAAGTCTGGACTCTAATATCAAAACTAGGAGCAAAAACGACTAATGTATCTTCGTATTAAGGGTGTTTACTTTCAAGTTATTTTTGTGAAGACACTTTGACTTGGAGCGAGTCAGAGACAGACAGACTCCTTTCTGAATAAGAGCTACGTCTTAGTTCTTGGAGTGCTAGAGTATTATTAGTAAAACTGGAACGAGTATTGTCGTATCTCGCTATATGAAGTGGACCAGGTGGTAACCTTTTGGAGATCCTTTGATTTGTAGGGAGGGAGGGAGAGCGTGTGTGTGGGAGATGCTTTAATTTTCTATGTTTAGGTTGGTGTCTAAACTAGCTCGTAGGACCTCGACTGCTCTCATAGGACAACCGTCTAACCCTACAATATTTGCTTGTGAATAAAACTCATAGGGTATTAAATCCTAGGCAGGTGGCTACCGTGGATAGGTATCAACTTAGATTTTTTTCCCCTGATTTTTCTCTTCTGAGGGAATTCTTTTATGGGAAATGATTTGCAATCCTTGTGTTATATTGATTTCCATTGTGGAACTTGTTGTTAATTCCATGTTCTTGCTTGAAATCTAGATAAAGGGTCCTAATGGTGAACATCTTCATGATGTCCGAGACAAGACGAGCGAAAAACATGAATTTGTTGTTCACAACAAAGGCCTTCATCGATTCTGCTTTACGAACAAGTCTCCGTACCACGAAACGATCGACTTTGATATGCACGTTGGTCATTTTTCCTATCAGGAGCAGCATGCAAAAGATGGTGAGATACCATTCTATGTTTTATTATGTACTGACATTGTTTTACAAGTTAAAATCAATCTCAAAATTGGTGCATATGCCTGCAGAGCATTTCAATCCTTTGATGGATCAAATATCTAAGCTGGAGGAGGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACTGATCGCCAGGAAATAGGTATGTCGATGAACTCGTCTCAAGCTTTTATAGTTTCTTCGACATCGACTTAGGAGTTTATTTCCTACGTTGAAGTTTTTCCTCGATGATATCGAGTGACTTTGAAACTTAACATATTAGATCCCGTTTGATAACTATTTGGATTTTGAAAACGTTTACAAAAGTAGATAACAAAGTAAAGGAACACATAGGTGGAAGTAACGTGAGCTTAATTTTTTAAAAGACAAAACAAGGAACCAAATAGTTATCAGTCGGGGCCTTAGGCAGTGTTCTTTTGAGTTCAACCACATGTAGGGGTGGAGGATTCCTGAGCGTGGCTACTCCCCAAAGTTTTGTTGTATAAGATATTCGAAGAAAGATTATGAGTAACAGAGAAGCCTTGCTTAACTTGGGGGTGTTCACGGGTTCGTAGGCTTGGTTGGCTTAAGCAACATCTCGGATATAACCCAATTGTTTAAGGTGCATATTTTATTAGAAACCATGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAACTCTCGGGGCGTTGCTTTTGGTTTCCCCGAAAGGCCTCATACTAATGGAGATGTATTCCTTACTTATGAACTCATGATTAACTCCTTAATTAGCCAATGTGGGACTCCTCTCCCAACAATCCTCCCCTCGAACAAAGTACACTATAGAACCCCCCTGAGGCCTATGGAGCACTAGAACAAAGTACACTCTTTGTTCGACACTTTAGTCAACTTTTGACTACACCTTCGAGGCTCACAACTTTTTTCTTTGACATTTGAGGATTCTATTGACATGACTAAATTAAGGGCATGACTCTGATACTATGTTAGAAACCACAACTCTCCATAATGGTATGATATTGTTCACTTTGAGCATAAGCTCTCATGACTCTTTTTTTTGTTTTCCGAAAAGACCTCATACCAATGGAGATGTATCCCTTACTTATAAACTCATGATCAACCCCTTGATTAGCCGATGTGGGACTCCTCTCCCAACAATCCTCAACATATTTGACCAACCCACTACTTAAAACTCGTACGGTTTGGTTCAGGTTGGGTTGAACGCATGTTCTTTTTTTTGGTACACTCGTAGCATATAGTCCATGGCAGATACCTCATAGGGGTATCAAGTGGAACTCGGGTCACATTTCCAGTTCAATCCGAATACCGATCTTGAAAGAATGAAGCTCGAGGTAGTAGATTGATTTGTTGGGTGATGTATTTGTGGTGTGTTTGATTGCAGTGAATGAAGCAATGAGCAAAAGGGCAATGCACAAGGCAATGTTTGAATCAGCAGCGCTTGTAGGGGCGAGTGTCCTCCAAGTCTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTGGCACTTCCAGAGTTTAAACCCCCTTTTTACTTCACCAACATTCTTTTTACCCCCACAGTAAAAGATTATATGCTAATCTATTTCTTCCTGTTCTTATTTATTTTTTTTTTTATTACTTTTGTTAGTGGAAATTCGGGAAGGAATTAGATTTTTATATTTAAATATGAATTTTTGAATTATTGTAAGAATATATGATATTCAAATATCTCGAGATGTTTAGCCATTTTATTGCCCATACCAGAGGTATATTGACTAC

mRNA sequence

ATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGTGGGGGTATTGCTGCTGAATTTGAGAAGATCAGAAGGGATTAGGTTTGTGATAGACAGGGAAGAATGTTTCTCTCATAATGTTCAATATGAGGGAGATACTGTTCATGTTTCTTTTGTTGTAATCAAGGCAGATTCAGCATGGCACTATGGCGATGATGGTGTTGATCTTGTGATAAAGGGTCCTAATGGTGAACATCTTCATGATGTCCGAGACAAGACGAGCGAAAAACATGAATTTGTTGTTCACAACAAAGGCCTTCATCGATTCTGCTTTACGAACAAGTCTCCGTACCACGAAACGATCGACTTTGATATGCACGTTGGTCATTTTTCCTATCAGGAGCAGCATGCAAAAGATGAGCATTTCAATCCTTTGATGGATCAAATATCTAAGCTGGAGGAGGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACTGATCGCCAGGAAATAGTGAATGAAGCAATGAGCAAAAGGGCAATGCACAAGGCAATGTTTGAATCAGCAGCGCTTGTAGGGGCGAGTGTCCTCCAAGTCTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTGGCACTTCCAGAGTTTAAACCCCCTTTTTACTTCACCAACATTCTTTTTACCCCCACAGTAAAAGATTATATGCTAATCTATTTCTTCCTGTTCTTATTTATTTTTTTTTTTATTACTTTTGTTAGTGGAAATTCGGGAAGGAATTAGATTTTTATATTTAAATATGAATTTTTGAATTATTGTAAGAATATATGATATTCAAATATCTCGAGATGTTTAGCCATTTTATTGCCCATACCAGAGGTATATTGACTAC

Coding sequence (CDS)

ATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGTGGGGGTATTGCTGCTGAATTTGAGAAGATCAGAAGGGATTAGGTTTGTGATAGACAGGGAAGAATGTTTCTCTCATAATGTTCAATATGAGGGAGATACTGTTCATGTTTCTTTTGTTGTAATCAAGGCAGATTCAGCATGGCACTATGGCGATGATGGTGTTGATCTTGTGATAAAGGGTCCTAATGGTGAACATCTTCATGATGTCCGAGACAAGACGAGCGAAAAACATGAATTTGTTGTTCACAACAAAGGCCTTCATCGATTCTGCTTTACGAACAAGTCTCCGTACCACGAAACGATCGACTTTGATATGCACGTTGGTCATTTTTCCTATCAGGAGCAGCATGCAAAAGATGAGCATTTCAATCCTTTGATGGATCAAATATCTAAGCTGGAGGAGGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACTGATCGCCAGGAAATAGTGAATGAAGCAATGAGCAAAAGGGCAATGCACAAGGCAATGTTTGAATCAGCAGCGCTTGTAGGGGCGAGTGTCCTCCAAGTCTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTGGCACTTCCAGAGTTTAA

Protein sequence

MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADSAWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDMHVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAMHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV

Homology

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BLAST of CmoCh11G018120 vs. ExPASy Swiss-Prot
Match: Q9S7M9 (Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana OX=3702 GN=At3g07680 PE=1 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.1e-84
Identity = 150/197 (76.14%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 18  LLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADSAWHYGDDGVDLVIKGPN 77
           LL + + + GIRFVIDREECFSH  +YEGDT+HVSFVVIK+DS WH+ +DGVDLVI GP 
Sbjct: 12  LLWSFQATLGIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVIHGPT 71

Query: 78  GEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDMHVGHFSYQEQHAKDEHF 137
           GE +HD R++ S KH+FVV  KG++RFCFTNKSPYHETIDFD+ +GHF+Y +QHAKDEHF
Sbjct: 72  GEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKDEHF 131

Query: 138 NPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAMHKAMFESAALVGASVLQ 197
            PLM+QISKLEEALYNIQFEQHWLEAQTDRQ IVNE MSKRA+HKA+FES AL+GAS LQ
Sbjct: 132 TPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGASFLQ 191

Query: 198 VYLLQRLFERKLGTSRV 215
           VYLL+RLFERKLG SRV
Sbjct: 192 VYLLRRLFERKLGMSRV 208

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BLAST of CmoCh11G018120 vs. ExPASy Swiss-Prot
Match: Q9LIL4 (Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana OX=3702 GN=At3g22845 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27
Identity = 69/205 (33.66%), Postives = 112/205 (54.63%), Query Frame = 0


Query: 11  MMAFVGVLLLN-LRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADSAWHYGDDGV 70
           +   +G++LLN + +   +   ++ EEC    V YEGDTV  +FVV+  D  W     G+
Sbjct: 10  VFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDIFWGSDHPGL 69

Query: 71  DLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDMHVGHFSYQE 130
           D  +  P G  +  ++  + +K EF     G+++FCF N     ET+ F +HVGH   + 
Sbjct: 70  DFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFYIHVGHIPNEH 129

Query: 131 QHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAMHKAMFESAA 190
             AKDEH +P+  +I++L EAL ++  EQ +L+A+  R    NE+  KR +   + E   
Sbjct: 130 DLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVIFYTVGEYIF 189

Query: 191 LVGASVLQVYLLQRLFERKLGTSRV 215
           L  AS LQV  +++LF + +  +RV
Sbjct: 190 LAAASGLQVLYIRKLFSKSVAYNRV 214

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BLAST of CmoCh11G018120 vs. ExPASy TrEMBL
Match: A0A6J1EKQ0 (transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschata OX=3662 GN=LOC111435219 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.0e-118
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60

Query: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120
           AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM
Sbjct: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120

Query: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180
           HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM
Sbjct: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh11G018120 vs. ExPASy TrEMBL
Match: A0A6J1JPF1 (transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita maxima OX=3661 GN=LOC111486518 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 2.9e-117
Identity = 212/214 (99.07%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMRCVVMMAFVGVLLLNLR+SEGIRFVIDREECFSHNV YEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRCVVMMAFVGVLLLNLRKSEGIRFVIDREECFSHNVLYEGDTVHVSFVVIKADS 60

Query: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120
           AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM
Sbjct: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120

Query: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180
           HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM
Sbjct: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh11G018120 vs. ExPASy TrEMBL
Match: A0A5D3D6W7 (Emp24/gp25L/p24 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00310 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 200/214 (93.46%), Postives = 205/214 (95.79%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMR VVMMAFVGVLLLNLR+SEGIRFVIDREECFSH VQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVVMMAFVGVLLLNLRKSEGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADS 60

Query: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120
            WHYGDDGVDLVIKGP GEHLHD RDKTSEKHEF+ HNKGLHRFCFTNKSPYHETIDFD+
Sbjct: 61  PWHYGDDGVDLVIKGPTGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180
           HVGHFSY EQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQ IVN+ MSKRA+
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh11G018120 vs. ExPASy TrEMBL
Match: A0A0A0K541 (GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031630 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.5e-110
Identity = 198/214 (92.52%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMR V+MMAFVGVLLL+LR+SEGIRFVIDREECFSH+VQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60

Query: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120
            WHYGDDGVDLVIKGP+GEHLHD RDKTSEKHEF+ HNKGLHRFCFTNKSPYHETIDFD+
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180
           HVGHFSY EQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQ IVNE M KRA+
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh11G018120 vs. ExPASy TrEMBL
Match: A0A6J1GLY5 (transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschata OX=3662 GN=LOC111455579 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.8e-110
Identity = 196/214 (91.59%), Postives = 205/214 (95.79%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMRCVVMMAF GVLLLNLR+SEGIRFVIDREECFSHNVQY+GDTVHVSFVVIK DS
Sbjct: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120
            WHYG+DGVDLVIKGP+GEHLHD+RDK SEKHEFV HNKGLHRFCFTNKSPYHETIDFD+
Sbjct: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180
           HVGHFSY EQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQ IVN+ MSKRA+
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKL TSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

[Close]

BLAST of CmoCh11G018120 vs. NCBI nr
Match: XP_022928389.1 (transmembrane emp24 domain-containing protein p24beta2-like [Cucurbita moschata])

HSP 1 Score: 434.9 bits (1117), Expect = 4.1e-118
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60

Query: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120
           AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM
Sbjct: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120

Query: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180
           HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM
Sbjct: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh11G018120 vs. NCBI nr
Match: XP_023529789.1 (transmembrane emp24 domain-containing protein p24beta2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433.3 bits (1113), Expect = 1.2e-117
Identity = 213/214 (99.53%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60

Query: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120
           AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM
Sbjct: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120

Query: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180
           HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMS+RAM
Sbjct: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSQRAM 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh11G018120 vs. NCBI nr
Match: XP_022989469.1 (transmembrane emp24 domain-containing protein p24beta2-like [Cucurbita maxima])

HSP 1 Score: 431.0 bits (1107), Expect = 5.9e-117
Identity = 212/214 (99.07%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMRCVVMMAFVGVLLLNLR+SEGIRFVIDREECFSHNV YEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRCVVMMAFVGVLLLNLRKSEGIRFVIDREECFSHNVLYEGDTVHVSFVVIKADS 60

Query: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120
           AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM
Sbjct: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120

Query: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180
           HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM
Sbjct: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh11G018120 vs. NCBI nr
Match: XP_038887290.1 (transmembrane emp24 domain-containing protein p24beta2 [Benincasa hispida])

HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110
Identity = 200/214 (93.46%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMR VVMMAFVGVLLLNLR SEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVVMMAFVGVLLLNLRESEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60

Query: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120
            WHYGDDGVDLVIKGP+GEHLHD RDKTSEKHEF+ HNKGLHRFCFTNKSPYHETIDFD+
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180
           HVGHFSY EQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQ IVN+ MSKRA+
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh11G018120 vs. NCBI nr
Match: KAA0059209.1 (emp24/gp25L/p24 family protein [Cucumis melo var. makuwa] >TYK19311.1 emp24/gp25L/p24 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 200/214 (93.46%), Postives = 205/214 (95.79%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60
           MERWAMR VVMMAFVGVLLLNLR+SEGIRFVIDREECFSH VQYEGDTVHVSFVVIKADS
Sbjct: 1   MERWAMRFVVMMAFVGVLLLNLRKSEGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADS 60

Query: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120
            WHYGDDGVDLVIKGP GEHLHD RDKTSEKHEF+ HNKGLHRFCFTNKSPYHETIDFD+
Sbjct: 61  PWHYGDDGVDLVIKGPTGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180
           HVGHFSY EQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQ IVN+ MSKRA+
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh11G018120 vs. TAIR 10
Match: AT3G07680.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 314.3 bits (804), Expect = 7.5e-86
Identity = 150/197 (76.14%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 18  LLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADSAWHYGDDGVDLVIKGPN 77
           LL + + + GIRFVIDREECFSH  +YEGDT+HVSFVVIK+DS WH+ +DGVDLVI GP 
Sbjct: 12  LLWSFQATLGIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVIHGPT 71

Query: 78  GEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDMHVGHFSYQEQHAKDEHF 137
           GE +HD R++ S KH+FVV  KG++RFCFTNKSPYHETIDFD+ +GHF+Y +QHAKDEHF
Sbjct: 72  GEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKDEHF 131

Query: 138 NPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAMHKAMFESAALVGASVLQ 197
            PLM+QISKLEEALYNIQFEQHWLEAQTDRQ IVNE MSKRA+HKA+FES AL+GAS LQ
Sbjct: 132 TPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGASFLQ 191

Query: 198 VYLLQRLFERKLGTSRV 215
           VYLL+RLFERKLG SRV
Sbjct: 192 VYLLRRLFERKLGMSRV 208

[Close]

BLAST of CmoCh11G018120 vs. TAIR 10
Match: AT3G22845.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-28
Identity = 69/205 (33.66%), Postives = 112/205 (54.63%), Query Frame = 0


Query: 11  MMAFVGVLLLN-LRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADSAWHYGDDGV 70
           +   +G++LLN + +   +   ++ EEC    V YEGDTV  +FVV+  D  W     G+
Sbjct: 10  VFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDIFWGSDHPGL 69

Query: 71  DLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDMHVGHFSYQE 130
           D  +  P G  +  ++  + +K EF     G+++FCF N     ET+ F +HVGH   + 
Sbjct: 70  DFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFYIHVGHIPNEH 129

Query: 131 QHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAMHKAMFESAA 190
             AKDEH +P+  +I++L EAL ++  EQ +L+A+  R    NE+  KR +   + E   
Sbjct: 130 DLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVIFYTVGEYIF 189

Query: 191 LVGASVLQVYLLQRLFERKLGTSRV 215
           L  AS LQV  +++LF + +  +RV
Sbjct: 190 LAAASGLQVLYIRKLFSKSVAYNRV 214

The following BLAST results are available for this feature:

BLAST of CmoCh11G018120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7M9	1.1e-84	76.14	Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana O...	[more]
Q9LIL4	2.0e-27	33.66	Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana O...	[more]

BLAST of CmoCh11G018120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EKQ0	2.0e-118	100.00	transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschat...	[more]
A0A6J1JPF1	2.9e-117	99.07	transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita maxima ...	[more]
A0A5D3D6W7	1.2e-110	93.46	Emp24/gp25L/p24 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0K541	7.5e-110	92.52	GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031630 PE=3 S...	[more]
A0A6J1GLY5	9.8e-110	91.59	transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschat...	[more]

BLAST of CmoCh11G018120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928389.1	4.1e-118	100.00	transmembrane emp24 domain-containing protein p24beta2-like [Cucurbita moschata]	[more]
XP_023529789.1	1.2e-117	99.53	transmembrane emp24 domain-containing protein p24beta2-like [Cucurbita pepo subs...	[more]
XP_022989469.1	5.9e-117	99.07	transmembrane emp24 domain-containing protein p24beta2-like [Cucurbita maxima]	[more]
XP_038887290.1	1.4e-110	93.46	transmembrane emp24 domain-containing protein p24beta2 [Benincasa hispida]	[more]
KAA0059209.1	2.4e-110	93.46	emp24/gp25L/p24 family protein [Cucumis melo var. makuwa] >TYK19311.1 emp24/gp25...	[more]

BLAST of CmoCh11G018120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07680.1	7.5e-86	76.14	emp24/gp25L/p24 family/GOLD family protein	[more]
AT3G22845.1	1.4e-28	33.66	emp24/gp25L/p24 family/GOLD family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 27..206 e-value: 3.0E-40 score: 149.7
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 34..206 e-value: 4.2E-33 score: 114.8
IPR009038	GOLD domain	PROSITE	PS50866	GOLD	coord: 35..122 score: 14.444189
None	No IPR available	PANTHER	PTHR22811:SF167	TMP21-RELATED PROTEIN-RELATED	coord: 14..210
IPR015720	Transmembrane emp24 domain-containing protein	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 14..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G018120.1	CmoCh11G018120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030134	COPII-coated ER to Golgi transport vesicle
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane