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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGAAGTTTGTATTGCGTTTGAGGACGTTCATACAAGGCATTTTTGGCGACACTATGTAAGATATACATACATACATATTTATATATATATATATATATATATATATATAACTCACCTTAAGAAATAGTAAATTCATCAGAAGCTAGAGAACAAAAAGTTAACCTGTATAGGCTAGTTAATTTCTTCTGCATAATGTATATTTATTGGGACTTTTTCAATCTTTTTCAGAAGCGTACATGCATCCATTATGACCCCAGAAAACACAGAACTGCTTCAGAAGGAAGTTTATGCTTATTCTTACTCTGAAGAAGATAAAGGTGAGATTCTAATTGACCAAATTCTTCCTGATTGGACCTGATCGAGGTTTAAAATATAGATGTTGAAAGAAATGTCGATGCCTCAGTTTTTTTTGATAATATCTATGGAAATAGTAGATGGGAATGTTGATTCACCCTTTATGTCGACATTGAATCTATTGACACACGTTATATGTTGCCGGAAATTTAATACCATGCTCTTCGTAACTACCTGTTTGTTTTATTCTTCCTGTCTCACTGTTGCAGAGTTTAAGCTTCCAAAACTGTTGAGTTCACTGGTGATGAGGCTACGAAACTGA mRNA sequence ATGAAGAAGTTTGTATTGCGTTTGAGGACGTTCATACAAGGCATTTTTGGCGACACTATAAGCGTACATGCATCCATTATGACCCCAGAAAACACAGAACTGCTTCAGAAGGAAGTTTATGCTTATTCTTACTCTGAAGAAGATAAAGAGTTTAAGCTTCCAAAACTGTTGAGTTCACTGGTGATGAGGCTACGAAACTGA Coding sequence (CDS) ATGAAGAAGTTTGTATTGCGTTTGAGGACGTTCATACAAGGCATTTTTGGCGACACTATAAGCGTACATGCATCCATTATGACCCCAGAAAACACAGAACTGCTTCAGAAGGAAGTTTATGCTTATTCTTACTCTGAAGAAGATAAAGAGTTTAAGCTTCCAAAACTGTTGAGTTCACTGGTGATGAGGCTACGAAACTGA Protein sequence MKKFVLRLRTFIQGIFGDTISVHASIMTPENTELLQKEVYAYSYSEEDKEFKLPKLLSSLVMRLRN
Homology
BLAST of CmoCh11G017960 vs. NCBI nr
Match: KAG7022776.1 (hypothetical protein SDJN02_16512, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 86.7 bits (213), Expect = 8.4e-14 Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
Query: 21 SVHASIMTPENTELLQKEVYAYSYSEEDKEFKLPKLL-SSLVMRLRN 67
SVHASIMTPENTELLQKEVYAYSYSEEDKEFKLPKLL SSLVMRLRN
Sbjct: 693 SVHASIMTPENTELLQKEVYAYSYSEEDKEFKLPKLLQSSLVMRLRN 739
BLAST of CmoCh11G017960 vs. NCBI nr
Match: KAG6589061.1 (hypothetical protein SDJN03_17626, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07 Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0
Query: 34 LLQKEVYAYSYSEEDKEFKLPKLLSSLVMRLRN 67
LLQKEVYAYSYSEEDKEFKLPKLLSSLVMRLRN
Sbjct: 702 LLQKEVYAYSYSEEDKEFKLPKLLSSLVMRLRN 734
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
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| KAG7022776.1 | 8.4e-14 | 97.87 | hypothetical protein SDJN02_16512, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6589061.1 | 1.5e-07 | 100.00 | hypothetical protein SDJN03_17626, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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