CmoCh11G017730 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCCTCAGCTATGAACTCAAGAAACTCACACCAAATCATCAACAAAGTTAACGAGCAATTGAGCAAATTCAAGGATTCTCAAGCCACATCTTCTTTACTATGCCATAGGCTTGGTGCCCTTCAAGTCTTGTATGATTATGTTGATAAGCTGCTTCTTTTACCACACTCCCAACAAGCATTAGCCCAAGGGAGTGATAAGGAAGTGTTGGATGACTTACTAGAAGGATCTCTCGAGCTGCTCGACTTGTGTGATACGGCTAAGAACGGCTTGTTACAAACCATGGAATGTACTCGTGAGCTCGAGTCGATTTTGCGTCGAAGGCGAGGAGACGTTTGTAGTTCTAGTTCACTTCAGAAGTCAAGGAAGTTGATAAAGAAAACAATCCATAAAGCCTTGAAGGGAATGGAAGGCAAACATTTCTACAAAGATCATGGAAGTTCAACCATTGTGAACTTGATTAAAGAGGTTGAAGCAATGACATACCATAGTATAGAGTTCTTATTGTTCTTCATAGCAGGAACAAAGTTGATATCAAAATGGAGCTGCTGGGCTTCATTTTCCAAGCTTGTTCAACCCAAAAGAGTAGCATGCATAAGCGAAGAAACAAGCATAAGTGTAATAGAAAGATTGGACTTGATATTAAGTTCAATTAGCAATCACCAAACAGAGGTTGAAGATATGCAGAACTTGGTGAGGGAGTGTGGGGCAAGCATTAAGGAAGTTGAAGAAGAACTTGAGGGTCTTTATAGGTTCATAATCAAAACAAGAGTGTCTCTTCTTAACATCTTCAACTACTAAATTTTGAGAAGTGTTGAACAAAACTATATAGAACATGTTGTATATTTGTTTAATTATCAACTAAACAGCTCTGTGTAAGTGAAGTTATGCAGAATTATAATGGTCTTAGTCCCATCTATCACAACAATCATCGCTTTATTTGTAACAGCGCAGCGCAGGCCCACTGCTAGCATATATTGTCTGTTTTGGCTTGTTATGTATTGCTATCAGCCTCACGGTTTTACAATGCGTCTACTCGGGAGAGGTTTTCATACCCTTATAAGGAATGCTTTGTTCTCCTCACCAAGTGATGTGGGATCTCACAGTCCACCCCTCTTGGGGACCTAGCGTTCTTGCTGGCACATCGCCTGATGACTGACTCTGATACCATTTGTAATGGCTCAAACCCACCGTTAGTAGATATTGTCCGCTTTGGCCCGTTATATATTGCCGTCAACCTCACGGTTTTAAAATGCGTCTACTAGGGAGAACTTTCCACACCCTTGTAGGGAACGTTTTGTTCCCCTCTCCAACTCATGTGGAATCTCACAATCCACCCCTTTGAGGGCCTAGCATCCTCGCTGGCACACCACCCGATGACTGACTCTGATACCATTTGTAACAGCCTAAACCTACCGCTAGTAGATATTGTCTGCTTAGGCCCGTTACGTATCGCTGTTAGCCTTATGGTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTCGTTTCCTCTCCAACTGATGTGGGATCTCACAATTTACCCCTCATTGAGGCCTAGCGTCCTCACTATCACACCGCCTAGTGACTAGCTCTGATACCATTTTTAACAACCCAAGCCCACCGCCAGCAGATATTATCCACTTTGGCTCGTTATGTATCGCCGTCAGCCTCACAGTTTTAAAATTCATCTACTAGGGAGACATTTCCACACCCTTATAAGGAATGCTTCGTTCCCTTCTCCAACTAATGTGGGATCTCACACCAACGAGTTACGTCAATCAAAGTATGAATTCAAGAGACAATTCACTTGTTCATTTTTTAGAACATAAGCATGAGAGCTAGAAGATGGCAGCATAGTGGGGATTCCAATGCTTACAATAGTTGAGAATGGAGGAAGCTTACAAGATAGAACAAGTTTTAAAATGGACATCATTCAGCCAGAATTTAAGCAAGAGGATACAATGATATCCAAGACTCTGTCAACAGCACTCGTTGGCTTTATAATATGAACTAGTTGCAGGTTATATGAACACATTGAAGGATTAAGTATATAAACAAGGAGCTAACAACCCGGTGATCGGTTAACATATCACAAACATCGCCCGACACATATCCGATCCAATCTTGTCTAATAGAAAGATTCTCCTGCAATTCGAACACGTTAATATGTTTAGTTTATGCATTGAAAGCTCAAAGGATAGGAGACATTGCCAAAACATTGCTGCAATAACGTTTAGATCCAGATTCCTTGTGTCTCTCCAGCCCCAGTTGTTATATTGAAGCTGTTCAACTTTTTTGAAGGTCATTAGCTACCCTTTTGGCTTCTCCAAGAGAGAAAGAACCAAGATTTGCATGGTTGCATTGATGAGCTACTTCTTCTACCATTCACCCAACAAACTCTTGTCCGCGAGAGAGATAACATGTAACAGCCCAAGCTCACCGCTAGTAGATATTGTTCTTTTTGGTCTCTTCCTTTCAGATTTCCTCTCAAGGTTTTTGAACGCGTCTGTAGGGAAAGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCAATGTGGGATATCACAATCCACCCCCCTTCAGGGCCCAGCGTCTTTACTAGCACACTGTCTCGTGTCTACTCCCCTTCGGGGAACAGTCTCCTCATTGGCACATCACTCGATGTCTGGCTCTGATACCATTTGTAACCATCCAAGCCCACCGCTAGCAGATATTGTCCTCCTTAGGCTTTCTCTATCAGGCTTCCTCTCAAGGTTTTTGAACGCGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAAGGTGTTTTGTTCTCCTCCCCAACCAATGTGGGATATCACGTAACAAAGGGGTTGATGATGTGCTTGAAGGGTCTTTAAGGATCTTAGACTTGTGTGATATGGCTAAAGATGCATTGTTGCAGACAAAAGAATGCGTACGTGAACTCGAATCAGTTTTACGTCAAAGAAGAGGTGAATCGGTTATCGCTAACGAGCTTCGAAAGTGCTCGAGTTCTAGGAAGTTGATAAAGAAAACAATTCACAAGGCATTGAAGGGAATCAAAAGGAAGTGTTCTAAGCAATGTGAGGAAAATTCAGCAACAGTTAGCTTGTTAAATGAAGTAGAAGCAGTGACATGTAGTACTGTTGAATCAGTATTGTTCTTCATTGCAGGACAAAAGTTGATATCAAAGTTGAGTCCATGGTCTTTGGTCTCCGAGCTGGTACAACCCAAAAGAGTTGCCTGCAAAGATGAAGATGAGGTAGACATGTTGGATGCCATACTATATGCAATTGCTAGCCACACGACCGATAAATCGTTCAACTTGCACGACCCGTTGACGAAATTTGAGTCGTGTATTCAAGAACTTGAAGATGATCTCGAGAGTCTACAAAGGCATCTAATAAGAAATAGAGTTTCCCTTCTCAATATCCTAAATCACTAA ATGGATGCCTCAGCTATGAACTCAAGAAACTCACACCAAATCATCAACAAAGTTAACGAGCAATTGAGCAAATTCAAGGATTCTCAAGCCACATCTTCTTTACTATGCCATAGGCTTGGTGCCCTTCAAGTCTTGTATGATTATGTTGATAAGCTGCTTCTTTTACCACACTCCCAACAAGCATTAGCCCAAGGGAGTGATAAGGAAGTGTTGGATGACTTACTAGAAGGATCTCTCGAGCTGCTCGACTTGTGTGATACGGCTAAGAACGGCTTGTTACAAACCATGGAATGTACTCGTGAGCTCGAGTCGATTTTGCGTCGAAGGCGAGGAGACGTTTGTAGTTCTAGTTCACTTCAGAAGTCAAGGAAGTTGATAAAGAAAACAATCCATAAAGCCTTGAAGGGAATGGAAGGCAAACATTTCTACAAAGATCATGGAAGTTCAACCATTGTGAACTTGATTAAAGAGGTTGAAGCAATGACATACCATAGTATAGAGTTCTTATTGTTCTTCATAGCAGGAACAAAGTTGATATCAAAATGGAGCTGCTGGGCTTCATTTTCCAAGCTTGTTCAACCCAAAAGAGTAGCATGCATAAGCGAAGAAACAAGCATAAGTGTAATAGAAAGATTGGACTTGATATTAAGTTCAATTAGCAATCACCAAACAGAGGTTGAAGATATGCAGAACTTGGTGAGGGAGTGTGGGGCAAGCATTAAGGAAGTTGAAGAAGAACTTGAGGGTCTTTATAGGATCTTAGACTTGTGTGATATGGCTAAAGATGCATTGTTGCAGACAAAAGAATGCGTACGTGAACTCGAATCAGTTTTACGTCAAAGAAGAGGTGAATCGGTTATCGCTAACGAGCTTCGAAAGTGCTCGAGTTCTAGGAAGTTGATAAAGAAAACAATTCACAAGGCATTGAAGGGAATCAAAAGGAAGTGTTCTAAGCAATGTGAGGAAAATTCAGCAACAGTTAGCTTGTTAAATGAAGTAGAAGCAGTGACATGTAGTACTGTTGAATCAGTATTGTTCTTCATTGCAGGACAAAAGTTGATATCAAAGTTGAGTCCATGGTCTTTGGTCTCCGAGCTGGTACAACCCAAAAGAGTTGCCTGCAAAGATGAAGATGAGGTAGACATGTTGGATGCCATACTATATGCAATTGCTAGCCACACGACCGATAAATCGTTCAACTTGCACGACCCGTTGACGAAATTTGAGTCGTGTATTCAAGAACTTGAAGATGATCTCGAGAGTCTACAAAGGCATCTAATAAGAAATAGAGTTTCCCTTCTCAATATCCTAAATCACTAA ATGGATGCCTCAGCTATGAACTCAAGAAACTCACACCAAATCATCAACAAAGTTAACGAGCAATTGAGCAAATTCAAGGATTCTCAAGCCACATCTTCTTTACTATGCCATAGGCTTGGTGCCCTTCAAGTCTTGTATGATTATGTTGATAAGCTGCTTCTTTTACCACACTCCCAACAAGCATTAGCCCAAGGGAGTGATAAGGAAGTGTTGGATGACTTACTAGAAGGATCTCTCGAGCTGCTCGACTTGTGTGATACGGCTAAGAACGGCTTGTTACAAACCATGGAATGTACTCGTGAGCTCGAGTCGATTTTGCGTCGAAGGCGAGGAGACGTTTGTAGTTCTAGTTCACTTCAGAAGTCAAGGAAGTTGATAAAGAAAACAATCCATAAAGCCTTGAAGGGAATGGAAGGCAAACATTTCTACAAAGATCATGGAAGTTCAACCATTGTGAACTTGATTAAAGAGGTTGAAGCAATGACATACCATAGTATAGAGTTCTTATTGTTCTTCATAGCAGGAACAAAGTTGATATCAAAATGGAGCTGCTGGGCTTCATTTTCCAAGCTTGTTCAACCCAAAAGAGTAGCATGCATAAGCGAAGAAACAAGCATAAGTGTAATAGAAAGATTGGACTTGATATTAAGTTCAATTAGCAATCACCAAACAGAGGTTGAAGATATGCAGAACTTGGTGAGGGAGTGTGGGGCAAGCATTAAGGAAGTTGAAGAAGAACTTGAGGGTCTTTATAGGATCTTAGACTTGTGTGATATGGCTAAAGATGCATTGTTGCAGACAAAAGAATGCGTACGTGAACTCGAATCAGTTTTACGTCAAAGAAGAGGTGAATCGGTTATCGCTAACGAGCTTCGAAAGTGCTCGAGTTCTAGGAAGTTGATAAAGAAAACAATTCACAAGGCATTGAAGGGAATCAAAAGGAAGTGTTCTAAGCAATGTGAGGAAAATTCAGCAACAGTTAGCTTGTTAAATGAAGTAGAAGCAGTGACATGTAGTACTGTTGAATCAGTATTGTTCTTCATTGCAGGACAAAAGTTGATATCAAAGTTGAGTCCATGGTCTTTGGTCTCCGAGCTGGTACAACCCAAAAGAGTTGCCTGCAAAGATGAAGATGAGGTAGACATGTTGGATGCCATACTATATGCAATTGCTAGCCACACGACCGATAAATCGTTCAACTTGCACGACCCGTTGACGAAATTTGAGTCGTGTATTCAAGAACTTGAAGATGATCTCGAGAGTCTACAAAGGCATCTAATAAGAAATAGAGTTTCCCTTCTCAATATCCTAAATCACTAA MDASAMNSRNSHQIINKVNEQLSKFKDSQATSSLLCHRLGALQVLYDYVDKLLLLPHSQQALAQGSDKEVLDDLLEGSLELLDLCDTAKNGLLQTMECTRELESILRRRRGDVCSSSSLQKSRKLIKKTIHKALKGMEGKHFYKDHGSSTIVNLIKEVEAMTYHSIEFLLFFIAGTKLISKWSCWASFSKLVQPKRVACISEETSISVIERLDLILSSISNHQTEVEDMQNLVRECGASIKEVEEELEGLYRILDLCDMAKDALLQTKECVRELESVLRQRRGESVIANELRKCSSSRKLIKKTIHKALKGIKRKCSKQCEENSATVSLLNEVEAVTCSTVESVLFFIAGQKLISKLSPWSLVSELVQPKRVACKDEDEVDMLDAILYAIASHTTDKSFNLHDPLTKFESCIQELEDDLESLQRHLIRNRVSLLNILNH Homology
BLAST of CmoCh11G017730 vs. ExPASy TrEMBL
Match: A0A6J1EJB7 (uncharacterized protein LOC111435126 OS=Cucurbita moschata OX=3662 GN=LOC111435126 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 7.6e-133 Identity = 252/254 (99.21%), Postives = 253/254 (99.61%), Query Frame = 0
BLAST of CmoCh11G017730 vs. ExPASy TrEMBL
Match: A0A0A0K659 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023950 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 4.1e-94 Identity = 195/273 (71.43%), Postives = 222/273 (81.32%), Query Frame = 0
BLAST of CmoCh11G017730 vs. ExPASy TrEMBL
Match: A0A5D3DIB4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003600 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.0e-92 Identity = 195/274 (71.17%), Postives = 222/274 (81.02%), Query Frame = 0
BLAST of CmoCh11G017730 vs. ExPASy TrEMBL
Match: A0A1S3BIF9 (uncharacterized protein LOC103490228 OS=Cucumis melo OX=3656 GN=LOC103490228 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.0e-92 Identity = 195/274 (71.17%), Postives = 222/274 (81.02%), Query Frame = 0
BLAST of CmoCh11G017730 vs. ExPASy TrEMBL
Match: A0A6J1JME4 (uncharacterized protein LOC111486500 OS=Cucurbita maxima OX=3661 GN=LOC111486500 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 5.0e-92 Identity = 187/210 (89.05%), Postives = 196/210 (93.33%), Query Frame = 0
BLAST of CmoCh11G017730 vs. NCBI nr
Match: KAG6589038.1 (hypothetical protein SDJN03_17603, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 803.9 bits (2075), Expect = 6.9e-229 Identity = 423/434 (97.47%), Postives = 427/434 (98.39%), Query Frame = 0
BLAST of CmoCh11G017730 vs. NCBI nr
Match: XP_022928232.1 (uncharacterized protein LOC111435126 [Cucurbita moschata]) HSP 1 Score: 483.8 bits (1244), Expect = 1.6e-132 Identity = 252/254 (99.21%), Postives = 253/254 (99.61%), Query Frame = 0
BLAST of CmoCh11G017730 vs. NCBI nr
Match: XP_023530303.1 (uncharacterized protein LOC111792910 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 473.4 bits (1217), Expect = 2.1e-129 Identity = 244/254 (96.06%), Postives = 251/254 (98.82%), Query Frame = 0
BLAST of CmoCh11G017730 vs. NCBI nr
Match: XP_038888978.1 (uncharacterized protein LOC120078742 [Benincasa hispida]) HSP 1 Score: 361.3 bits (926), Expect = 1.2e-95 Identity = 196/272 (72.06%), Postives = 221/272 (81.25%), Query Frame = 0
BLAST of CmoCh11G017730 vs. NCBI nr
Match: KGN43321.1 (hypothetical protein Csa_020438 [Cucumis sativus]) HSP 1 Score: 355.1 bits (910), Expect = 8.4e-94 Identity = 195/273 (71.43%), Postives = 222/273 (81.32%), Query Frame = 0
BLAST of CmoCh11G017730 vs. TAIR 10
Match: AT2G17080.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 127.9 bits (320), Expect = 2.0e-29 Identity = 91/243 (37.45%), Postives = 148/243 (60.91%), Query Frame = 0
BLAST of CmoCh11G017730 vs. TAIR 10
Match: AT4G35200.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 121.7 bits (304), Expect = 1.5e-27 Identity = 88/246 (35.77%), Postives = 145/246 (58.94%), Query Frame = 0
BLAST of CmoCh11G017730 vs. TAIR 10
Match: AT2G17070.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 120.6 bits (301), Expect = 3.3e-27 Identity = 91/253 (35.97%), Postives = 147/253 (58.10%), Query Frame = 0
BLAST of CmoCh11G017730 vs. TAIR 10
Match: AT4G35210.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 109.8 bits (273), Expect = 5.8e-24 Identity = 82/246 (33.33%), Postives = 139/246 (56.50%), Query Frame = 0
BLAST of CmoCh11G017730 vs. TAIR 10
Match: AT3G51400.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 80.5 bits (197), Expect = 3.7e-15 Identity = 63/196 (32.14%), Postives = 104/196 (53.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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