CmoCh11G017180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G017180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR21-like
Location	Cmo_Chr11: 12180495 .. 12180815 (+)
RNA-Seq Expression	CmoCh11G017180
Synteny	CmoCh11G017180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATTCGTCTACCGGAGATCATTCTTCACGCCAAGCAAATTACTCACCGGCAAATTGGGTTTGAAGTGATGAAGCACCGACCGGCGTCATCGGACGTTCCGAAAGGCCATTTCGTGGTCTATGTTGGGGAGGACGAAGAAGAAAGGAAGCGATTCGTGGTGCCATTGTCGTACTTGAAGAATCCTCTGTTTCAAGAACTGTTGAGTAAGGCTGCTGAAGAGTTTGGATTTGAACATCAGTTTGGTGGGATTACGATTCCTTGCGCGCAGGATCATTTTCTCGGTTTAACTTCTCGATTGAACACACCCATAAGCTGA

mRNA sequence

ATGGGTATTCGTCTACCGGAGATCATTCTTCACGCCAAGCAAATTACTCACCGGCAAATTGGGTTTGAAGTGATGAAGCACCGACCGGCGTCATCGGACGTTCCGAAAGGCCATTTCGTGGTCTATGTTGGGGAGGACGAAGAAGAAAGGAAGCGATTCGTGGTGCCATTGTCGTACTTGAAGAATCCTCTGTTTCAAGAACTGTTGAGTAAGGCTGCTGAAGAGTTTGGATTTGAACATCAGTTTGGTGGGATTACGATTCCTTGCGCGCAGGATCATTTTCTCGGTTTAACTTCTCGATTGAACACACCCATAAGCTGA

Coding sequence (CDS)

ATGGGTATTCGTCTACCGGAGATCATTCTTCACGCCAAGCAAATTACTCACCGGCAAATTGGGTTTGAAGTGATGAAGCACCGACCGGCGTCATCGGACGTTCCGAAAGGCCATTTCGTGGTCTATGTTGGGGAGGACGAAGAAGAAAGGAAGCGATTCGTGGTGCCATTGTCGTACTTGAAGAATCCTCTGTTTCAAGAACTGTTGAGTAAGGCTGCTGAAGAGTTTGGATTTGAACATCAGTTTGGTGGGATTACGATTCCTTGCGCGCAGGATCATTTTCTCGGTTTAACTTCTCGATTGAACACACCCATAAGCTGA

Protein sequence

MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS

Homology

[Close]

BLAST of CmoCh11G017180 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.2e-19
Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 0


Query: 10  LHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELL 69
           L AKQI  R+           SS  P+G   VYVGE+++++KR+VVP+SYL  PLFQ+LL
Sbjct: 8   LGAKQIIRRE-----------SSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLL 67

Query: 70  SKAAEEFGFEHQFGGITIPCAQDHFLGLTSRL 102
           SK+ EEFG++H  GG+TIPC +  F  +TS++
Sbjct: 68  SKSEEEFGYDHPMGGLTIPCHESLFFTVTSQI 88

[Close]

BLAST of CmoCh11G017180 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.0e-19
Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL 60
           MG RLP I         R+      +    S +VPKG+ VVYVG   ++ +RF++P+SYL
Sbjct: 1   MGFRLPGI---------RKTSIAANQASSKSVEVPKGYLVVYVG---DKMRRFLIPVSYL 60

Query: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLN 103
             P FQ+LL++A EEFG++H  GG+TIPC +D FL +TS LN
Sbjct: 61  NQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90

[Close]

BLAST of CmoCh11G017180 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.0e-19
Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 20  IGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAAEEFGFE 79
           +G + +  R  +S  PKG   VYVG  E ++KR++VPLSYL  P FQ LLSK+ EEFGF+
Sbjct: 8   LGAKKILSRSTASAAPKGFLAVYVG--ESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFD 67

Query: 80  HQFGGITIPCAQDHFLGLTSRL 102
           H  GG+TIPC +D F+ +TSRL
Sbjct: 68  HPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of CmoCh11G017180 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.0e-19
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 9   ILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQEL 68
           +L AK+I  R  G        A S  PKG   VYVG  E ++KR++VP+SYL  P FQ L
Sbjct: 7   LLGAKKILSRSTG--------AGSAAPKGFLAVYVG--ESQKKRYLVPVSYLNQPSFQAL 66

Query: 69  LSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRL 102
           LSK+ EEFGF+H  GG+TIPC +D F+ +TSRL
Sbjct: 67  LSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh11G017180 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.9e-18
Identity = 46/85 (54.12%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 20  IGFEVMKHRPAS--SDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAAEEFG 79
           +GF +   R AS  +D PKG+  VYVG   E+ KRFV+P+SYL  P FQ+LLS+A EEFG
Sbjct: 1   MGFRLPGIRKASKAADAPKGYLAVYVG---EKLKRFVIPVSYLNQPSFQDLLSQAEEEFG 60

Query: 80  FEHQFGGITIPCAQDHFLGLTSRLN 103
           ++H  GG+TIPC++D F  +TS LN
Sbjct: 61  YDHPMGGLTIPCSEDVFQCITSCLN 82

[Close]

BLAST of CmoCh11G017180 vs. ExPASy TrEMBL
Match: A0A6J1EK13 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111435269 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.7e-54
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL 60
           MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL
Sbjct: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL 60

Query: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 107
           KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS
Sbjct: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 106

[Close]

BLAST of CmoCh11G017180 vs. ExPASy TrEMBL
Match: A0A6J1JMM0 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111486593 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.0e-54
Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL 60
           MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDE+ERKRFVVPLSYL
Sbjct: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEKERKRFVVPLSYL 60

Query: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 107
           KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS
Sbjct: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 106

[Close]

BLAST of CmoCh11G017180 vs. ExPASy TrEMBL
Match: A0A0A0K2G9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009150 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQIT-------HRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRF 60
           MGIRLPEIILHAKQIT       HRQ+G+EV KHR + SDVPKGHFVVYVGE+EE+RKRF
Sbjct: 1   MGIRLPEIILHAKQITHRAAAPSHRQVGYEVTKHRSSFSDVPKGHFVVYVGEEEEDRKRF 60

Query: 61  VVPLSYLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 107
           VVPLSYLKNPLFQELLSKAA+EFGF++ FGGITIPCAQD FLGLTSRLN  IS
Sbjct: 61  VVPLSYLKNPLFQELLSKAADEFGFDNHFGGITIPCAQDQFLGLTSRLNRLIS 113

[Close]

BLAST of CmoCh11G017180 vs. ExPASy TrEMBL
Match: A0A1S3BJM3 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103490313 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.9e-43
Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQIT-------HRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRF 60
           MGIR PEIILHAKQIT       HRQ+G+EV K R +SSDVPKGHFVVYVGE+EE+RKRF
Sbjct: 1   MGIRFPEIILHAKQITHRVAAPSHRQVGYEVTKQRSSSSDVPKGHFVVYVGEEEEDRKRF 60

Query: 61  VVPLSYLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 107
           VVPLSYLKNPLFQELLSKAA+EFGF++QFGGITIPCA+D FLGLTSRLN  IS
Sbjct: 61  VVPLSYLKNPLFQELLSKAADEFGFDNQFGGITIPCAEDQFLGLTSRLNRLIS 113

[Close]

BLAST of CmoCh11G017180 vs. ExPASy TrEMBL
Match: A0A5A7U3A0 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00950 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 9.7e-42
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQIT-------HRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRF 60
           MGIR PEIILHAKQIT       HRQ+G+EV K R +SSDVPKGHFVVYVGE+EE+RKRF
Sbjct: 1   MGIRFPEIILHAKQITHRVAAPSHRQVGYEVTKQRSSSSDVPKGHFVVYVGEEEEDRKRF 60

Query: 61  VVPLSYLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRL 102
           VVPLSYLKNPLFQELLSKAA+EFGF++QFGGITIPCA+D FLGLTSR+
Sbjct: 61  VVPLSYLKNPLFQELLSKAADEFGFDNQFGGITIPCAEDQFLGLTSRM 108

[Close]

BLAST of CmoCh11G017180 vs. NCBI nr
Match: XP_022928472.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023529823.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.5 bits (563), Expect = 3.5e-54
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL 60
           MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL
Sbjct: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL 60

Query: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 107
           KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS
Sbjct: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 106

[Close]

BLAST of CmoCh11G017180 vs. NCBI nr
Match: XP_022989530.1 (auxin-responsive protein SAUR21-like [Cucurbita maxima])

HSP 1 Score: 219.9 bits (559), Expect = 1.0e-53
Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL 60
           MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDE+ERKRFVVPLSYL
Sbjct: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEKERKRFVVPLSYL 60

Query: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 107
           KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS
Sbjct: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 106

[Close]

BLAST of CmoCh11G017180 vs. NCBI nr
Match: XP_038887901.1 (auxin-responsive protein SAUR21-like [Benincasa hispida])

HSP 1 Score: 188.3 bits (477), Expect = 3.3e-44
Identity = 93/112 (83.04%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQIT------HRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFV 60
           MGI LP IILHAKQIT      HRQ+G+EV K R ASSDVPKGHFVVYVGE+EEERKRFV
Sbjct: 1   MGIHLPAIILHAKQITHRAAPSHRQVGYEVTKQRSASSDVPKGHFVVYVGEEEEERKRFV 60

Query: 61  VPLSYLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 107
           VPLSYLKNPLFQELLSKAA+EFGFEHQ GGITIPCAQD FLGLTSRL+ PIS
Sbjct: 61  VPLSYLKNPLFQELLSKAADEFGFEHQLGGITIPCAQDQFLGLTSRLSRPIS 112

[Close]

BLAST of CmoCh11G017180 vs. NCBI nr
Match: XP_004144830.2 (auxin-responsive protein SAUR21 [Cucumis sativus] >KGN43219.1 hypothetical protein Csa_020319 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43
Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQIT-------HRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRF 60
           MGIRLPEIILHAKQIT       HRQ+G+EV KHR + SDVPKGHFVVYVGE+EE+RKRF
Sbjct: 1   MGIRLPEIILHAKQITHRAAAPSHRQVGYEVTKHRSSFSDVPKGHFVVYVGEEEEDRKRF 60

Query: 61  VVPLSYLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 107
           VVPLSYLKNPLFQELLSKAA+EFGF++ FGGITIPCAQD FLGLTSRLN  IS
Sbjct: 61  VVPLSYLKNPLFQELLSKAADEFGFDNHFGGITIPCAQDQFLGLTSRLNRLIS 113

[Close]

BLAST of CmoCh11G017180 vs. NCBI nr
Match: XP_008447999.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo])

HSP 1 Score: 183.7 bits (465), Expect = 8.1e-43
Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQIT-------HRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRF 60
           MGIR PEIILHAKQIT       HRQ+G+EV K R +SSDVPKGHFVVYVGE+EE+RKRF
Sbjct: 1   MGIRFPEIILHAKQITHRVAAPSHRQVGYEVTKQRSSSSDVPKGHFVVYVGEEEEDRKRF 60

Query: 61  VVPLSYLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 107
           VVPLSYLKNPLFQELLSKAA+EFGF++QFGGITIPCA+D FLGLTSRLN  IS
Sbjct: 61  VVPLSYLKNPLFQELLSKAADEFGFDNQFGGITIPCAEDQFLGLTSRLNRLIS 113

[Close]

BLAST of CmoCh11G017180 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.9 bits (263), Expect = 2.0e-23
Identity = 53/102 (51.96%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL 60
           M IR+P ++  +KQI  RQ          +S DVPKG+  VYVG  E+  KRFVVP+SYL
Sbjct: 1   MAIRIPRVLQSSKQIL-RQAKLLSSSSSSSSLDVPKGYLAVYVG--EQNMKRFVVPVSYL 60

Query: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLN 103
             P FQ+LL KA EEFGF+H  GG+TIPC+++ F+ L SR N
Sbjct: 61  DQPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CmoCh11G017180 vs. TAIR 10
Match: AT4G34780.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 101.7 bits (252), Expect = 3.8e-22
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 3   IRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYLKN 62
           IR   I+   K++  ++I    ++H     +V KGHF VYVGEDE E KRFVVP+SYL +
Sbjct: 2   IRFKTIVFQVKRVLDKKI--SRLRH---IINVRKGHFAVYVGEDEMETKRFVVPISYLNH 61

Query: 63  PLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRL 102
           PLFQ LL KA +EFG +HQ   +TIPCA+D FL +TSRL
Sbjct: 62  PLFQALLRKAEDEFGTDHQRTYLTIPCAKDVFLDITSRL 95

[Close]

BLAST of CmoCh11G017180 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-21
Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL 60
           M IRL  +I ++KQ   +Q            S VPKGH  VYVGE+ E +KRFVVP+SYL
Sbjct: 1   MAIRLSRVI-NSKQSQKQQ------------SRVPKGHVAVYVGEEMESKKRFVVPISYL 60

Query: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 107
            +P FQ LLS+A EEFGF H  GG+TIPC ++ F+GL +     +S
Sbjct: 61  NHPSFQGLLSRAEEEFGFNHPIGGLTIPCREETFVGLLNSYGCIVS 93

[Close]

BLAST of CmoCh11G017180 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-21
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYL 60
           M IR+  ++  +KQ+       + + H   +  +PKGH  VYVGE  ++R RFVVP++YL
Sbjct: 1   MAIRISRVLQSSKQL------LKSLSHSSNNVAIPKGHLAVYVGEMMQKR-RFVVPVTYL 60

Query: 61  KNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNT 104
            +P FQ+LL KA EEFGF+H  GG+TIPC +  F+ L SRL+T
Sbjct: 61  SHPCFQKLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLST 96

[Close]

BLAST of CmoCh11G017180 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20
Identity = 51/104 (49.04%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 1   MGIRLPEIILHAKQITHRQIGFEV--MKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLS 60
           MGI+L   +  AKQ   R +   +  +     +++VPKGH  VYVGE    RKRFV+P+S
Sbjct: 1   MGIQLIG-LSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGE-TYHRKRFVIPIS 60

Query: 61  YLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLN 103
           YL +PLFQ LL+ A EEFGF+H  GG+TIPC +D+F  L S L+
Sbjct: 61  YLNHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILS 102

The following BLAST results are available for this feature:

BLAST of CmoCh11G017180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41220	2.2e-19	48.91	Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 S...	[more]
P33080	5.0e-19	46.08	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9FJF9	5.0e-19	53.66	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FK62	5.0e-19	51.61	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
P33081	1.9e-18	54.12	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CmoCh11G017180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK13	1.7e-54	100.00	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114352...	[more]
A0A6J1JMM0	5.0e-54	99.06	auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111486593...	[more]
A0A0A0K2G9	1.4e-43	80.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009150 PE=3 SV=1	[more]
A0A1S3BJM3	3.9e-43	79.65	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103490313 PE=...	[more]
A0A5A7U3A0	9.7e-42	79.63	HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G0...	[more]

BLAST of CmoCh11G017180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928472.1	3.5e-54	100.00	auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023529823.1 auxin-...	[more]
XP_022989530.1	1.0e-53	99.06	auxin-responsive protein SAUR21-like [Cucurbita maxima]	[more]
XP_038887901.1	3.3e-44	83.04	auxin-responsive protein SAUR21-like [Benincasa hispida]	[more]
XP_004144830.2	2.8e-43	80.53	auxin-responsive protein SAUR21 [Cucumis sativus] >KGN43219.1 hypothetical prote...	[more]
XP_008447999.1	8.1e-43	79.65	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]	[more]

BLAST of CmoCh11G017180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	2.0e-23	51.96	SAUR-like auxin-responsive protein family	[more]
AT4G34780.1	3.8e-22	53.54	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	1.4e-21	49.06	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.9e-21	46.60	SAUR-like auxin-responsive protein family	[more]
AT4G34770.1	1.2e-20	49.04	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 19..99 e-value: 2.4E-26 score: 91.7
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..103
None	No IPR available	PANTHER	PTHR31929:SF129	AUXIN-INDUCED PROTEIN 15A-LIKE	coord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G017180.1	CmoCh11G017180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0016021	integral component of membrane