CmoCh11G017140 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTCCGTTTGCCTAGAATTGTTAATGCTAAGCAAAGTCCTCGACGATCTTCATTGTCTCGAAACGGAGCATCAGTGGTCGACGTTCCAAAGGGGTACTTTACAGTTTATGTTGGTGAAGAACAAAAGAAGCGTTTTGTCATTCCATTATCTTACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGTAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGACCATTTCCTTGATGTCACTTGTAGCTTGAATGGCTCATGA ATGGGTTTCCGTTTGCCTAGAATTGTTAATGCTAAGCAAAGTCCTCGACGATCTTCATTGTCTCGAAACGGAGCATCAGTGGTCGACGTTCCAAAGGGGTACTTTACAGTTTATGTTGGTGAAGAACAAAAGAAGCGTTTTGTCATTCCATTATCTTACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGTAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGACCATTTCCTTGATGTCACTTGTAGCTTGAATGGCTCATGA ATGGGTTTCCGTTTGCCTAGAATTGTTAATGCTAAGCAAAGTCCTCGACGATCTTCATTGTCTCGAAACGGAGCATCAGTGGTCGACGTTCCAAAGGGGTACTTTACAGTTTATGTTGGTGAAGAACAAAAGAAGCGTTTTGTCATTCCATTATCTTACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGTAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGACCATTTCCTTGATGTCACTTGTAGCTTGAATGGCTCATGA MGFRLPRIVNAKQSPRRSSLSRNGASVVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLNGS Homology
BLAST of CmoCh11G017140 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 7.1e-28 Identity = 63/98 (64.29%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of CmoCh11G017140 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.1e-27 Identity = 60/96 (62.50%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh11G017140 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.7e-26 Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 0
BLAST of CmoCh11G017140 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.3e-26 Identity = 61/96 (63.54%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of CmoCh11G017140 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 6.6e-26 Identity = 63/98 (64.29%), Postives = 71/98 (72.45%), Query Frame = 0
BLAST of CmoCh11G017140 vs. ExPASy TrEMBL
Match: A0A6J1EP25 (auxin-induced protein X15-like OS=Cucurbita moschata OX=3662 GN=LOC111435258 PE=3 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.2e-49 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of CmoCh11G017140 vs. ExPASy TrEMBL
Match: A0A6J1JF08 (auxin-induced protein X15-like OS=Cucurbita maxima OX=3661 GN=LOC111486309 PE=3 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 7.3e-44 Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 0
BLAST of CmoCh11G017140 vs. ExPASy TrEMBL
Match: A0A6J1GL62 (auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454989 PE=3 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.4e-39 Identity = 84/98 (85.71%), Postives = 88/98 (89.80%), Query Frame = 0
BLAST of CmoCh11G017140 vs. ExPASy TrEMBL
Match: A0A0A0K5T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009020 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 3.5e-38 Identity = 84/100 (84.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of CmoCh11G017140 vs. ExPASy TrEMBL
Match: A0A6J1I180 (auxin-induced protein X10A-like OS=Cucurbita maxima OX=3661 GN=LOC111468494 PE=3 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 4.6e-38 Identity = 83/100 (83.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of CmoCh11G017140 vs. NCBI nr
Match: XP_022928448.1 (auxin-induced protein X15-like [Cucurbita moschata]) HSP 1 Score: 205.3 bits (521), Expect = 2.4e-49 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of CmoCh11G017140 vs. NCBI nr
Match: KAG6588984.1 (hypothetical protein SDJN03_17549, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 200.3 bits (508), Expect = 7.8e-48 Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 0
BLAST of CmoCh11G017140 vs. NCBI nr
Match: XP_022989152.1 (auxin-induced protein X15-like [Cucurbita maxima]) HSP 1 Score: 186.0 bits (471), Expect = 1.5e-43 Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 0
BLAST of CmoCh11G017140 vs. NCBI nr
Match: KAG6588982.1 (hypothetical protein SDJN03_17547, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 176.8 bits (447), Expect = 9.2e-41 Identity = 86/100 (86.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of CmoCh11G017140 vs. NCBI nr
Match: XP_023529827.1 (auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.8 bits (447), Expect = 9.2e-41 Identity = 87/98 (88.78%), Postives = 89/98 (90.82%), Query Frame = 0
BLAST of CmoCh11G017140 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 122.9 bits (307), Expect = 1.5e-28 Identity = 57/99 (57.58%), Postives = 77/99 (77.78%), Query Frame = 0
BLAST of CmoCh11G017140 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26 Identity = 52/77 (67.53%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of CmoCh11G017140 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 114.0 bits (284), Expect = 6.8e-26 Identity = 51/76 (67.11%), Postives = 63/76 (82.89%), Query Frame = 0
BLAST of CmoCh11G017140 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.5 bits (275), Expect = 7.5e-25 Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 0
BLAST of CmoCh11G017140 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24 Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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