CmoCh11G016440 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGGCTTGCTTTCAATTCCGCTGGTGGGGGTTCCATGACATCGACGATGGGAAGGCGATCCATATGGGTTGCTCTTCTCGTCATCTCTCTTCTTTTTTCGTTGCGACCTCAGAGAGTTTCTTCCACTCTTCCTCTTCAATCATTGAATCAGGTGCTTATTTTCGCCGATGAATTTAACTTCCGTCTGTTATTATTCAAATTTTGCGAGATGGATCTTCATTAATCCCTTTTGAAATGTAATTTCACTGTTTGATTTCGCAAATGAACGATGGATGGGAAGATTCTATAGTAGTGACTTTGTTGAAATGATCTAGAGTTTGATTTAGATTCCTCACGACTTGGTCTCTTTGACCGGATGATCTGTTTTAGAATGTTCTCTGCGTTTCTGCATCGAAATCCAATGAAAATTTGTTGATGTGATTTCTGAAAATTCATCTGGGAGTCGAAATATTTGAAGTTTTCTGAAACTTTGTTGTATTTTTCATCGCTACTTATGTCCACTTCCACTGAATTTGTGTGCTATGAGTGAGGATGTGAGATCTCACCTCGGTTGGGCAAGAGATCGAAGCATTCTTTACAAGGATGTAGACAAGTTTTAAAAGCTTGAAAGGGAAAGCCCAAAGAGGATAATATTTGCCAGTGGTGGGTTTGGATTGTTACAAATGGTATCAGAGTCAGTCAATTGTTACAAACGGTATCAGAGCCAGACACCAAGCGATGTGCCAGCGAGGAGGCTGAGTCTCGAAGGGGGTGAGGCGGTGTGTCAGCAAGGACGCTGGGCCCTAAAGGGGGTGAATTAGGGGGTCCCACATCGATTGGAGAAGGGAACGAGTGTCAGCGAGGACGCTGGGCCCCGAAGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAGCATTCTTTACAACGGTGGAAACCTCTCCCTAGCAGATGCATTTTAAAAACCTAGAGGGGAAGCCTGATAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTAACTTGTTACAAATGGTATCAAAGCCAGACATCGGACGATATGCCAACGAGGAGGCTGAACCCCGAAGGGAGTGGACACGAGGCGGTGCACCAGCAAAGACGTTAGGCCCTAAATGGGGGTGGATTGGGGGGTCCCACATCGATTGAAGAAGGGAACGAGTGCCAGTGAGGGCGTTGGACCCCGAAAGGGGTGGATTGTGAGATCCACATCAGTTGGAGAGGAAATGAAACATTATTTATAAGCGTGTGGAAACCTGTCCCTAGTAGACGCGTTTTAAAAACCTTGAGAGGAAGCCCGAAAGGAAAAGCCAGAGGAAGACAATATTTTTTCCATTTTCTTACTTGTTATGGTTAAATGCAATTTATTACTGGAGGAACTTCAATTCTATGAATGACCCTCTTCTTTGCTGTCATTTTCCATAGGGTTCTAAAGATTCTGCCACTGAGAGGTAATATTTGGTTTCTTTACCGTCACCTATGTTCCTATATAATGGTAATAAATTTTGAGCTTTGGAGTTGATGTCCAGTGCTCCAAAGCAGGATTGGAACGATGCTCGTGAGGTACACTGCTCGAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGGTATTCATTCAACATTTGATTCTTATAGTTATTGTTTTTACCTCGACGCATCGATACGACCATTCGTATGATATGAAACTTTATCGAACTAAATCAGAACGTTTTTACCTCGACGCAGTATCTAATGCCCTTTGTGGATAAAAAGAAACACAAGATTTCAACGGAGTGTAGGCTTCACCCGGATAATGATATGTTCAGAGATCAAGAACAGCACAAAACGCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTATCTTGATCAGCATTTTGACAATAGACACTATGATTTGCTGAATGTGGTAAGTTTCCGTTGATGATTCAATTCCCAATTGATTCTTAGTTAGTCATATAAGATCATTCTAGAACGTCTCTAAGAATCGTGAGCTTTCGTTAGTTCGTAGTGGATTATATGTCTATACTTTTTTGAGTTCCTGTTGTGAGGTGGGAGGAACCGAACATTTAATCCTTTGATCAAAGGTATATATCTTAATTAGTTGAGATAATGCTCAGGCTGACGTTCACAGTGGATTATATTGCAATAGTCAAGTAGATATAACACGAAACTTTAGGTACATTATAATATGTTTATGCTTCTTTCTAGTTATCCGATCGTGCCTATTCGAGTAGACAGGGTATTCATATGGACTTCAGTCAAAAAGATCTTAAACTGACCCAAGTACCTGTAGTATTTTGTGTCTTTAGTAACCGATCTGTGTCTTAATAATAGTTTCCACTATGCTTTTGTGAGATTCCATATTGGTTGGAGAGGGAAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCTCTAGTAGATGCGTTTTAAAACCTTGAGGGGAAGCCCGAAAGCCCCGAAAGGAAAAGTTCAAAGAGGACAATATCTACTGGCGGTGGGCTTGGACTATTACAAATGGTATCAGAGTCAGACACTGGGCAGTGTGCCAGCGAGGACATTAGGCTCCAAGGGGTGGATTGTGAGATCCTACATTGGTTGGAGAGAAAACGAAACATTCCTTATAAGGGTGTAAAAATCTCTTTATAGTAGACGCGTTTTAAAATCTTGAGAGAAAATCCAAAAGAGAAAGCCTAAAGAGGACAATATCTTCTAGCGGTGGGCTTGAGCTTGGGCTGTTACACCTTTCTTCTACTTATACATCACGAGTATAACCCCTAGACGTTAGAAAAAGCATTGTGTACTTCAGTTTTAGCTGATATGGCACTCGAATCATCTTGCTCGTGTTTAATCCAGAGTCGAAACAAGTGCATGGCAGATCTTTGTGGTGCATTGCACTGTGATCATGTGATGGATTCAGTATCACAGAAGAAAAGTAAATGCAATCCTGCTGCTACTGCAAGAAACAAACACATGTGTGAGGTAACCTCAAAAAACTTCCTGTAGATTTCTTCTTTATATACTCACAATTCACCACACAATTGTTAACTCATTGCAGGCTCTTGCTGATAGTTGTTTTCCCATCAACCAGGGTGTAGCGAGCCATCTTCACGGTAGCTTCAGAACTCTCCCCTACAACTTTCATTACTATCATCTATCTAATGGAACTCTTTTGGTGTTATTCAAATGGTAGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACTTGTAGCGGAAAGCCAAAACCGTTCTCGAGAGGTCGACAGGTATGTAGTTTCGTTGTATGTATATATATGGCTCCTTTTTATCAATGTCTCATGGTATATGATGCCTGTTGAGTGTCACAATCGCACTCTTGTAATAGCGAGAGAGCGATTGTGCGGCACTTGTTCTAACCAAGCGAACAAGTCAGCCGTGAGAAATTCGGACATCACGGACAACGTCGACATATGTTCAAACCTCGAGTCATGTTGAGAGAAAAGGTTTAGAAAACGTGCGCGAGGAAATACATTTGAAACGGTTTGAAGAATTGAAGAAAACAACGTTATATGACTATAAGCAAATTAAGAAATATCACGGCTTAAATAGGTAAGAAGAAATGACAACTAGTCATATCCCCTATAGTACATTTTGGGGCATTTTAGCCCTGGCGAGTGTAAACATGGTTTTGGTAAATGGTCATACACCCTCGTATTGTCCCAACGTGAAATGGTAAAGGCCTATTTAGGATGAAAGCATGTAAAAGGGGTTTTGGAACGAGTATGCAACCATAGACAATATGTCTTGGACAAGTAAGATCGGGACATCTGTTGTGCGGCCATGCGGCCATAGACAATACGCTTTGGACAAGCATGACCGTGACATTGAGTAATCTTCAAGTTATCACATTGGTCTCTCTTATCTTGATCGGCTCTGAAAAATATCAACATGCCTTGTTGTGTTGTCAATGAACTTTTAACATACGTAAGAATTGTTCAGTCAAATCATCTGAAGTTTGTGTTTCGTTACTGCATCAAATTCACTTGTTTATCCAATAATCATCTAAGGTTCATCGGTCTCTTCCTGTTCTAACAGCTAGCAAGAAAACAATTCTAACCCGTTTTCTTTTTTTAAAAAAACCCAACTTTCATCGAAAAAGAAGAAAGAATCTATGTGAGATCCCACATTGGTTGGAGAGGAGAACGTAGCATTCCTTTTAAGAGTGTGGAAACTTTTCTTTAGCAGACATGTTTTAAAACCGTGAGACTAACAGCGATATATAATAGGCCAAAGTGGATAATATCTGCTAGCGGTGAGCTTGGGCTGTAACAAATGGTACAGAGCTAGACACCAGGAGGTGTGTCAGCGAGGACGTTGGGTGGGCCCCCAAGGGTGTGGATTGTGAGATCCTACATCGGTTGGAGAGGATAACGAAACATTCATTTTAATGGTGTGGAAACCTCTTCCTAGCATACGCGTTTTAAAATCGTGAGGCTGACGACGATACGTAACGAACCAGAGCGGATAATATCTATTAGTAGTGAGCTTGAGCGGTTACAATTGGTATTAGAGCCTAACATCAGTGAGGATGCTGGCCCCCAAAGGGGGTAGATTGTGAGATCTCAGATCAGTTGGAGAGGAGAACATAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAATCGTGAGGCTGACGACGATATGTAATGAGCCAAAGTGGACAATATCTTCTAGCGGTGGGCTTGGGGTGTTATAAATGGTATCAGAGTTAGACACTAGGAGGTGTGTCAACAAGGACGTTTAAAACCGTGAGACTTGACGACGATATATATTGTAAGATCCTGCATGGGTTAGAGAGGAGAATAAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTGACACATTTAAAACCGTGAGACTTGACGACGATATATAACATGCTAAAGCAGACGAGTGATGGGTTTGAGTTGTTACAATCTACAAGAACATACAAAATGTAAACCCACAAAAAGAGTCCCCAACTACCAGAAATGACCTCGTCACCCGTCCAACCATATTCACCACCTCCTCCAAAGACCTCGTCACCCGTCCACCCATATGTTACAAATATCGCTTCTACATGAATCAAATATCGAGTGGATGAACATGTCATTGTAGACTTTATTCTTTTCTTGCACTTGTACTACTGAAAACCTCTGATGAACTTTCTTTTTGTCGAATGCATTCTTCGTGCAGGTTAGGACGAGTTGGTCCTACGTCGTTATTTCAGTTTTGACCATACTTATTGTGCTGTTTTTCTATGTCTTCGTTTACTTATATAAGAGGTATCTCTCCTTAGACCGGCCTACCTTCCATTTGTATCAGTCGATGAAAGGTTCGACCTTGGCTTGACAATCGTGTTCATTTTGCAGAGGAATGCGAACGAGACCACAAGTGTTGAAGCGCCTCTCGGAAAGTGGAAGAAAGAAAAAACCTTCGTAGAATAGAAAGAAACTCTTGCCCTTTCATTAACAATATGCATATTTATTTACGTAACGGGCCGTAACGGGCCAAACCGGACAACATCTTCTCGATCACTTTTTAGGTAGAGAGGGCAAAGCTTGTTCGTTTTAAGGAGTTTGTTTTCCCTCATCATTTGTAATTATAGAGCTCTAAATACAAACCCATCATCTCGGGAGCAATAAGATTTTTGTATCATAACATTTCCTTTGATGGTAAATTCTAACTCTTAAACTTTCGGGAG AGAGGCTTGCTTTCAATTCCGCTGGTGGGGGTTCCATGACATCGACGATGGGAAGGCGATCCATATGGGTTGCTCTTCTCGTCATCTCTCTTCTTTTTTCGTTGCGACCTCAGAGAGTTTCTTCCACTCTTCCTCTTCAATCATTGAATCAGGGTTCTAAAGATTCTGCCACTGAGAGTGCTCCAAAGCAGGATTGGAACGATGCTCGTGAGGTACACTGCTCGAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGTATCTAATGCCCTTTGTGGATAAAAAGAAACACAAGATTTCAACGGAGTGTAGGCTTCACCCGGATAATGATATGTTCAGAGATCAAGAACAGCACAAAACGCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTATCTTGATCAGCATTTTGACAATAGACACTATGATTTGCTGAATGTGAGTCGAAACAAGTGCATGGCAGATCTTTGTGGTGCATTGCACTGTGATCATGTGATGGATTCAGTATCACAGAAGAAAAGTAAATGCAATCCTGCTGCTACTGCAAGAAACAAACACATGTGTGAGGCTCTTGCTGATAGTTGTTTTCCCATCAACCAGGGTGTAGCGAGCCATCTTCACGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACTTGTAGCGGAAAGCCAAAACCGTTCTCGAGAGGTCGACAGGTTAGGACGAGTTGGTCCTACGTCGTTATTTCAGTTTTGACCATACTTATTGTGCTGTTTTTCTATGTCTTCGTTTACTTATATAAGAGAGGAATGCGAACGAGACCACAAGTGTTGAAGCGCCTCTCGGAAAGTGGAAGAAAGAAAAAACCTTCGTAGAATAGAAAGAAACTCTTGCCCTTTCATTAACAATATGCATATTTATTTACGTAACGGGCCGTAACGGGCCAAACCGGACAACATCTTCTCGATCACTTTTTAGGTAGAGAGGGCAAAGCTTGTTCGTTTTAAGGAGTTTGTTTTCCCTCATCATTTGTAATTATAGAGCTCTAAATACAAACCCATCATCTCGGGAGCAATAAGATTTTTGTATCATAACATTTCCTTTGATGGTAAATTCTAACTCTTAAACTTTCGGGAG ATGACATCGACGATGGGAAGGCGATCCATATGGGTTGCTCTTCTCGTCATCTCTCTTCTTTTTTCGTTGCGACCTCAGAGAGTTTCTTCCACTCTTCCTCTTCAATCATTGAATCAGGGTTCTAAAGATTCTGCCACTGAGAGTGCTCCAAAGCAGGATTGGAACGATGCTCGTGAGGTACACTGCTCGAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGTATCTAATGCCCTTTGTGGATAAAAAGAAACACAAGATTTCAACGGAGTGTAGGCTTCACCCGGATAATGATATGTTCAGAGATCAAGAACAGCACAAAACGCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTATCTTGATCAGCATTTTGACAATAGACACTATGATTTGCTGAATGTGAGTCGAAACAAGTGCATGGCAGATCTTTGTGGTGCATTGCACTGTGATCATGTGATGGATTCAGTATCACAGAAGAAAAGTAAATGCAATCCTGCTGCTACTGCAAGAAACAAACACATGTGTGAGGCTCTTGCTGATAGTTGTTTTCCCATCAACCAGGGTGTAGCGAGCCATCTTCACGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACTTGTAGCGGAAAGCCAAAACCGTTCTCGAGAGGTCGACAGGTTAGGACGAGTTGGTCCTACGTCGTTATTTCAGTTTTGACCATACTTATTGTGCTGTTTTTCTATGTCTTCGTTTACTTATATAAGAGAGGAATGCGAACGAGACCACAAGTGTTGAAGCGCCTCTCGGAAAGTGGAAGAAAGAAAAAACCTTCGTAG MTSTMGRRSIWVALLVISLLFSLRPQRVSSTLPLQSLNQGSKDSATESAPKQDWNDAREVHCSRERSRAAWKIIEEYLMPFVDKKKHKISTECRLHPDNDMFRDQEQHKTHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYDLLNVSRNKCMADLCGALHCDHVMDSVSQKKSKCNPAATARNKHMCEALADSCFPINQGVASHLHEFFLRQFCDAHTCSGKPKPFSRGRQVRTSWSYVVISVLTILIVLFFYVFVYLYKRGMRTRPQVLKRLSESGRKKKPS Homology
BLAST of CmoCh11G016440 vs. ExPASy TrEMBL
Match: A0A6J1EKH9 (uncharacterized protein LOC111435184 OS=Cucurbita moschata OX=3662 GN=LOC111435184 PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 6.6e-162 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
BLAST of CmoCh11G016440 vs. ExPASy TrEMBL
Match: A0A5A7URM7 (Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00300 PE=4 SV=1) HSP 1 Score: 493.4 bits (1269), Expect = 6.2e-136 Identity = 242/282 (85.82%), Postives = 263/282 (93.26%), Query Frame = 0
BLAST of CmoCh11G016440 vs. ExPASy TrEMBL
Match: A0A0A0L8D2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592150 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 8.1e-136 Identity = 241/282 (85.46%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of CmoCh11G016440 vs. ExPASy TrEMBL
Match: A0A6J1J0Y1 (uncharacterized protein LOC111482459 OS=Cucurbita maxima OX=3661 GN=LOC111482459 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135 Identity = 240/280 (85.71%), Postives = 259/280 (92.50%), Query Frame = 0
BLAST of CmoCh11G016440 vs. ExPASy TrEMBL
Match: A0A1S3BMS8 (uncharacterized protein LOC103491758 OS=Cucumis melo OX=3656 GN=LOC103491758 PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 6.9e-135 Identity = 240/280 (85.71%), Postives = 262/280 (93.57%), Query Frame = 0
BLAST of CmoCh11G016440 vs. NCBI nr
Match: XP_022928324.1 (uncharacterized protein LOC111435184 [Cucurbita moschata]) HSP 1 Score: 579.7 bits (1493), Expect = 1.4e-161 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
BLAST of CmoCh11G016440 vs. NCBI nr
Match: KAG6588922.1 (hypothetical protein SDJN03_17487, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 577.0 bits (1486), Expect = 8.8e-161 Identity = 282/283 (99.65%), Postives = 282/283 (99.65%), Query Frame = 0
BLAST of CmoCh11G016440 vs. NCBI nr
Match: KAG7022689.1 (hypothetical protein SDJN02_16423, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 564.7 bits (1454), Expect = 4.5e-157 Identity = 277/284 (97.54%), Postives = 280/284 (98.59%), Query Frame = 0
BLAST of CmoCh11G016440 vs. NCBI nr
Match: XP_023532028.1 (uncharacterized protein LOC111794116 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 563.5 bits (1451), Expect = 1.0e-156 Identity = 276/280 (98.57%), Postives = 277/280 (98.93%), Query Frame = 0
BLAST of CmoCh11G016440 vs. NCBI nr
Match: XP_038891552.1 (uncharacterized protein LOC120080934 [Benincasa hispida]) HSP 1 Score: 497.7 bits (1280), Expect = 6.8e-137 Identity = 239/280 (85.36%), Postives = 262/280 (93.57%), Query Frame = 0
BLAST of CmoCh11G016440 vs. TAIR 10
Match: AT5G63280.1 (C2H2-like zinc finger protein ) HSP 1 Score: 298.5 bits (763), Expect = 5.6e-81 Identity = 148/282 (52.48%), Postives = 209/282 (74.11%), Query Frame = 0
BLAST of CmoCh11G016440 vs. TAIR 10
Match: AT5G40710.1 (zinc finger (C2H2 type) family protein ) HSP 1 Score: 298.1 bits (762), Expect = 7.4e-81 Identity = 146/282 (51.77%), Postives = 208/282 (73.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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