CmoCh11G015530 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G015530
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	WD repeat-containing protein LWD1
Location	Cmo_Chr11: 11185666 .. 11190294 (+)
RNA-Seq Expression	CmoCh11G015530
Synteny	CmoCh11G015530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATAGCTAGGGCGTTCATAACACACCCGAGGGGGCTACTACGCTCATTGCGCACTTGCATCATCACCAGAGCTTAGCTACCACTTCGCCGAGCTCCTACACCTACCAGAACGTCGAATCATCACGTGGCTGCTAAAACAAGCTAAACTTCACACCGCGCCCATAAGACCCTCTCATGGTCGAAGGATCCACAGCAACCTAAATAAGCCTCGCTTACTGGTATCTGAGCAATTCTTTCCGTTGCTTTTATAGAACTTCCCTCCTGTGTTAGCAAACCATCACCTATTAATACAACACCAACATTATTTGATTCTAAATGTCAAACATCGATGCAAAGGTTAGATTAAACCACCTCTATCGACCCAACTAGTCCTCTAACAAGCAAGTAAGCCAACTAGTAGGTTATCTCTCTACATTAGAGCTTTGGTCAGTGGCGAGTGGAAGGGCATCGCTAGGATCACAAAATATTTAATATCTCTTTATAAATCTTTTAATTAAGAAGATAAATATTTCACTAGATGATCATAAACGACTCAATCTTAATTCTAAACAAGTTATGAATTCTTGGTTGTGACGGGTTTGTCTATTGGTTAATTCAATATATCTACTATTTTAGAGATAAGTAGATGAGTGGTTCACTTAAGTACTGATTTCGAAACATGAACCATCGACCCTTATCCCTCCTACGGGCTCGAGAGAGATTAAGTTTATGATTGAATCATAAAAAAATTGTTAATTATAGAATCAAGGGTGATGGGTCTACGATAGCAGTCGCGTTAATAACCACACATCTAGAACGGTACCGACGATGGTTTAGCCGTGGCTAGGTCTAGGTCGTCGAGTTGCGTGCAAATTATGATATGAATTGAAATTTGAAAAATAATTTTAAATCTGAATTAAAAGGAAAATAATAATAATAAAAATAAAAGATGGCCAATGGAAATAGGATAATTGGATATTTGTATAAATAATAATTTATGTTGCGGTGGATTTGGTTGTGGCCGGGAGGGTTCAGCAAGTTCCTACTCCAATTTGACTCGTTCCGATCATCCTCACAGTTCAATCACAACAGGTCGCTGCCTTTTCCCGGCGGAGAGAGAGGCGGAGAGAGAGGCGGATGGGTGCAAACAGTGAGGCCAACCAAGATGGCTCCGACGAGCAGCAGAAGCGGTCTGAGATCTATACCTATGAGGCGCCATGGCACATCTACGCGATGAACTGGAGCGTCCGGCGAGACAAGAAGTACCGGCTAGCAATCGCTAGTCTTCTGGAGCAGTATCCCAACAGGGTGGAGATTGTCCAGCTTGATGATTCCAGCGGCGAGATCCGCTCCGACCCTAACCTCTCCTTTGAGCATCCCTATCCTCCCACCAAGACCATCTTCATTCCAGACAAGGAGTGCCAGCGCCCTGATCTTCTCGCCACTTCCAGCGATTTTCTCCGCGTATGGCGCATCTCAGACGATCCTTCATCTGTGGAGCTCAAGAGTCTTCTTAATGGCAACAAGAACAGCGAGTTTTGTGGCCCTCTAACCTCCTTTGACTGGAACGATGCTGAGCCAAAGCGCATCGGAACCTCCAGTATCGACACGACCTGCACCATTTGGGATATTGAACGCGAGACCGTCGACACGCAACTTATCGCCCACGATAAGGAGGTTTATGACATCGCTTGGGGCGGTGTTGGTGTATTTGCTTCCGTTTCCGCCGATGGTTCTGTCCGCGTCTTCGATTTGCGTGACAAGGAGCACTCTACCATCATCTACGAGAGTTCTGAGCCTGACACTCCATTGGTTCGGCTAGGCTGGAACAAGCAGGACCCGAGATATATGGCCACGATTATCATGGACAGCGCCAAGGTTGTCGTGCTTGACATTCGCTTCCCGACGCTCCCCGTCGTCGAGTTACAGAGGCACCAAGCTAGTGCGAACGCCATTGCATGGGCGCCTCATAGTTCTTGCCACATTTGCACTGCAGGGGATGATTCTCAGGCCTTGATTTGGGATTTGTCGTCCATGGGCCAACCAGTCGAAGGTGGCCTCGATCCCATTCTTGCCTACACCGCTGGAGCAGAAATCGAGCAGCTGCAATGGTCCTCTTCCCAGCCGGACTGGGTTGCGATTGCCTTTTCCACCAAGCTTCAGATTCTGAGGGTATGATCCATGTGAGTGATTCCATGTAACTTCTCTACCAGAAAACATAATGGGGTCTACTTGTTCTAGCATGTTCGTTCCATTTCTTTACGCAACAACACTTTGGCCATACTACTAATTGTTGTACAATTCCGCCATGAACCCATAATATGCCTTCAGCTGTTCGTACTCTGTTCTTTTAACGAAATTTCCTTTTGGTATATGCAGCAACACCTAGCTTTGGTTCTTCACCTACACAGATAGTCATGTCTGAGAACCATCATATGTAACTATGTTCTTGAAACTTGATTCAACACTCGAATTTAGATTTATCCTTCCTAGTGCTTTCTATATTGATGCTTTTTCTGATAAATATTATCGAACACTTATGAAGTATGAATATTTTGTGCATTTCTCTCAACTTGGAAATTCCTTCTTTCCATACAAAGTTTCTGCTGGATTTAAAGTGTGCTAACTATCTGTTCTGGAATGGGGAGGAACTTGATGAGAATTAAGTCCATTGTTCGAAGCACATAGCCTTATCATCGACGAATGTTAGAATTGAATGATGATAAATTTACACGACGACAAGAATTTAGAAGAGGGAAAATGTTATCTAAAGGTGAAAAGTTTCGAATTCGTCTCGGAAGTTTGTAAGAAAGTGGTAGGTATTCAATTTTTTCTGATCTTTGATTACCTCTTTTCTCATCCACCAATTCAATGAGTGTATGTCATGTAAGTTTATCATCAGCAAATTTTAACATTAATCAACAGTGGGGAAAAGCCTGCAGGTGTGCAAGGTGCTGTCTTCACCTTATTTTCCTCAAGTGAGGTGATCACCAATACATGAAGCTTTAAGGTGTTTCCAAGTATTTACTTCAACAGAATTTACTTTTATATGATTTGATGTTGAAGGGCTTATAATTGAAGAACAGGGATGAAAAGGAAGGCTTGTTCCTATCTGCATCTTCGCTCGAGTCTCTTCGGTACCAACCTATAAGCTATCGCCATCAAAGGACTCTGAACCCATCTACACAATCCTCCTCCATTGGTATTGTCTGCTTTTCTCGTTCTTTTTCCTTTCTCCCAGTTCTCACGCTGAAAGTTGAATCAGAACAAACAGGTTAGCCTTTTTGTTTGATTTAATTACTCATCTTTGTAACATTAATCATTTATTATGACAAAATAAGAAAGATTTCTTATTGCTCATGACTTTTCTGTATCTTTAATGTCAAAACACTTCAATTTTGTTTGATAATTGATATTTTAGACTTACATTTAAAGTTTCTTATTTCCTGATTTTATTTTCTAAGGTATTAGGTATTGTGCATCATCATATCATTCCATACTCAGGTTTAGCCTTGTCTCTTCGATCTTCTGCACCTTGGAACATGTTGCACTTTTTAAGAAGATTGCTATATAGTAAAGCTATGTTGTTCCATAGAAAAGGTAGGAGAGTAAATGTTTTGATCCTTTGGAATAAGTAACTACGTAGAAGAACCAAAATGGAATTTAAGGCATTATTTACATGCAATAGTGAAATAGATTACAAGAGGGCTCTGTAGTCTACCTGTGTTCTTATCTGTTTAGCTTTTAGGGATGCAAGAACAAAAAAGAGTCCAGCATTTCATTTACATCTAATTTTTGGAGTGACAATGGTATGGCTGGTTTTAACTTGATCATGTTTTTTTTTTTTTTTTTTTTTCAGTTGACAGGCTTTAGTACGATGGTTGTTTTGAATTTTCGTTTTGTCGAACTGTCATGGACACTTCGAGTTAGTTTTTGCTATGGAGTCAACCAAAAGTCTAGCACCCATTCTACCTTTTATTCCCCTGAATTCTGTGTTTAGAAAGCTAACTCAAGAAGATTAGCAACATGTTTTCTATGATTCACAATTTGGCTGCTGGTTGATGGCTCACACAGATTGAAATCTTTCTTTGAATCTTGTGATGGCATTGCCATTGTGATTCAAACAGTAGAAAATTGTAACAGTCCCTACCAAATGAAACATTCATAGATTTTCTGGCCCATTGGCAGGAGATTCCTCAACTTAAACCTTACACCTTAATGCCATATAACATATCTACTGCAGTCCTAGTGGTGTGATACCATGCTCATGGTGACATTGCTAAGAGAAGATCTTAAAGGAAAAAATAAGCTTTAGGCAGCAATCCCTTCCGACCAGAAGAGTTGAATACAAGGCATTTTCAATCAAAGCTTCCTTCAGGTTCTACCGTCAATACCCTTGCTTAACTCCTTGTTCGGTAAACTAGTCGCTGGTTGTCAACTTTCTGTTGTCTTTCAATCCATTAATGGTGTGCCAAACCACACATCCTTATGTTCAATTTAAGTGTTATACATCCTTTACAAGTGATTGTTAGGATCGCACAACAATGTATACACTCGAACACAAAAAACAAAATGAAAGGAGAATATTGGTTAAAGGATTTGTATTAATGACTCAGCTTATTATATATAGTTTTAACAGATATAA

mRNA sequence

ATGGTTCAATCACAACAGGTCGCTGCCTTTTCCCGGCGGAGAGAGAGGCGGAGAGAGAGGCGGATGGGTGCAAACAGTGAGGCCAACCAAGATGGCTCCGACGAGCAGCAGAAGCGGTCTGAGATCTATACCTATGAGGCGCCATGGCACATCTACGCGATGAACTGGAGCGTCCGGCGAGACAAGAAGTACCGGCTAGCAATCGCTAGTCTTCTGGAGCAGTATCCCAACAGGGTGGAGATTGTCCAGCTTGATGATTCCAGCGGCGAGATCCGCTCCGACCCTAACCTCTCCTTTGAGCATCCCTATCCTCCCACCAAGACCATCTTCATTCCAGACAAGGAGTGCCAGCGCCCTGATCTTCTCGCCACTTCCAGCGATTTTCTCCGCGTATGGCGCATCTCAGACGATCCTTCATCTGTGGAGCTCAAGAGTCTTCTTAATGGCAACAAGAACAGCGAGTTTTGTGGCCCTCTAACCTCCTTTGACTGGAACGATGCTGAGCCAAAGCGCATCGGAACCTCCAGTATCGACACGACCTGCACCATTTGGGATATTGAACGCGAGACCGTCGACACGCAACTTATCGCCCACGATAAGGAGGTTTATGACATCGCTTGGGGCGGTGTTGGTGTATTTGCTTCCGTTTCCGCCGATGGTTCTGTCCGCGTCTTCGATTTGCGTGACAAGGAGCACTCTACCATCATCTACGAGAGTTCTGAGCCTGACACTCCATTGGTTCGGCTAGGCTGGAACAAGCAGGACCCGAGATATATGGCCACGATTATCATGGACAGCGCCAAGGTTGTCGTGCTTGACATTCGCTTCCCGACGCTCCCCGTCGTCGAGTTACAGAGGCACCAAGCTAGTGCGAACGCCATTGCATGGGCGCCTCATAGTTCTTGCCACATTTGCACTGCAGGGGATGATTCTCAGGCCTTGATTTGGGATTTGTCGTCCATGGGCCAACCAGTCGAAGGTGGCCTCGATCCCATTCTTGCCTACACCGCTGGAGCAGAAATCGAGCAGCTGCAATGGTCCTCTTCCCAGCCGGACTGGGTTGCGATTGCCTTTTCCACCAAGCTTCAGATTCTGAGGCAACACCTAGCTTTGGTTCTTCACCTACACAGATAGTCATGTCTGAGAACCATCATATGTAACTATGTTCTTGAAACTTGATTCAACACTCGAATTTAGATTTATCCTTCCTAGTGCTTTCTATATTGATGCTTTTTCTGATAAATATTATCGAACACTTATGAAGTATGAATATTTTGTGCATTTCTCTCAACTTGGAAATTCCTTCTTTCCATACAAAGTTTCTGCTGGATTTAAAGTGTGCTAACTATCTGTTCTGGAATGGGGAGGAACTTGATGAGAATTAAGTCCATTGTTCGAAGCACATAGCCTTATCATCGACGAATGTTAGAATTGAATGATGATAAATTTACACGACGACAAGAATTTAGAAGAGGGAAAATGTTATCTAAAGGTGAAAAGTTTCGAATTCGTCTCGGAAGTTTGTAAGAAAGTGGTAGGTATTCAATTTTTTCTGATCTTTGATTACCTCTTTTCTCATCCACCAATTCAATGAGTGTATGTCATGTAAGTTTATCATCAGCAAATTTTAACATTAATCAACAGTGGGGAAAAGCCTGCAGGTGTGCAAGGTGCTGTCTTCACCTTATTTTCCTCAAGTGAGGTGATCACCAATACATGAAGCTTTAAGGTGTTTCCAAGTATTTACTTCAACAGAATTTACTTTTATATGATTTGATGTTGAAGGGCTTATAATTGAAGAACAGGGATGAAAAGGAAGGCTTGTTCCTATCTGCATCTTCGCTCGAGTCTCTTCGGTACCAACCTATAAGCTATCGCCATCAAAGGACTCTGAACCCATCTACACAATCCTCCTCCATTGGTATTGTCTGCTTTTCTCGTTCTTTTTCCTTTCTCCCAGTTCTCACGCTGAAAGTTGAATCAGAACAAACAGTTGACAGGCTTTAGTACGATGGTTGTTTTGAATTTTCGTTTTGTCGAACTGTCATGGACACTTCGAGTTAGTTTTTGCTATGGAGTCAACCAAAAGTCTAGCACCCATTCTACCTTTTATTCCCCTGAATTCTGTGTTTAGAAAGCTAACTCAAGAAGATTAGCAACATGTTTTCTATGATTCACAATTTGGCTGCTGGTTGATGGCTCACACAGATTGAAATCTTTCTTTGAATCTTGTGATGGCATTGCCATTGTGATTCAAACAGTAGAAAATTGTAACAGTCCCTACCAAATGAAACATTCATAGATTTTCTGGCCCATTGGCAGGAGATTCCTCAACTTAAACCTTACACCTTAATGCCATATAACATATCTACTGCAGTCCTAGTGGTGTGATACCATGCTCATGGTGACATTGCTAAGAGAAGATCTTAAAGGAAAAAATAAGCTTTAGGCAGCAATCCCTTCCGACCAGAAGAGTTGAATACAAGGCATTTTCAATCAAAGCTTCCTTCAGGTTCTACCGTCAATACCCTTGCTTAACTCCTTGTTCGGTAAACTAGTCGCTGGTTGTCAACTTTCTGTTGTCTTTCAATCCATTAATGGTGTGCCAAACCACACATCCTTATGTTCAATTTAAGTGTTATACATCCTTTACAAGTGATTGTTAGGATCGCACAACAATGTATACACTCGAACACAAAAAACAAAATGAAAGGAGAATATTGGTTAAAGGATTTGTATTAATGACTCAGCTTATTATATATAGTTTTAACAGATATAA

Coding sequence (CDS)

ATGGTTCAATCACAACAGGTCGCTGCCTTTTCCCGGCGGAGAGAGAGGCGGAGAGAGAGGCGGATGGGTGCAAACAGTGAGGCCAACCAAGATGGCTCCGACGAGCAGCAGAAGCGGTCTGAGATCTATACCTATGAGGCGCCATGGCACATCTACGCGATGAACTGGAGCGTCCGGCGAGACAAGAAGTACCGGCTAGCAATCGCTAGTCTTCTGGAGCAGTATCCCAACAGGGTGGAGATTGTCCAGCTTGATGATTCCAGCGGCGAGATCCGCTCCGACCCTAACCTCTCCTTTGAGCATCCCTATCCTCCCACCAAGACCATCTTCATTCCAGACAAGGAGTGCCAGCGCCCTGATCTTCTCGCCACTTCCAGCGATTTTCTCCGCGTATGGCGCATCTCAGACGATCCTTCATCTGTGGAGCTCAAGAGTCTTCTTAATGGCAACAAGAACAGCGAGTTTTGTGGCCCTCTAACCTCCTTTGACTGGAACGATGCTGAGCCAAAGCGCATCGGAACCTCCAGTATCGACACGACCTGCACCATTTGGGATATTGAACGCGAGACCGTCGACACGCAACTTATCGCCCACGATAAGGAGGTTTATGACATCGCTTGGGGCGGTGTTGGTGTATTTGCTTCCGTTTCCGCCGATGGTTCTGTCCGCGTCTTCGATTTGCGTGACAAGGAGCACTCTACCATCATCTACGAGAGTTCTGAGCCTGACACTCCATTGGTTCGGCTAGGCTGGAACAAGCAGGACCCGAGATATATGGCCACGATTATCATGGACAGCGCCAAGGTTGTCGTGCTTGACATTCGCTTCCCGACGCTCCCCGTCGTCGAGTTACAGAGGCACCAAGCTAGTGCGAACGCCATTGCATGGGCGCCTCATAGTTCTTGCCACATTTGCACTGCAGGGGATGATTCTCAGGCCTTGATTTGGGATTTGTCGTCCATGGGCCAACCAGTCGAAGGTGGCCTCGATCCCATTCTTGCCTACACCGCTGGAGCAGAAATCGAGCAGCTGCAATGGTCCTCTTCCCAGCCGGACTGGGTTGCGATTGCCTTTTCCACCAAGCTTCAGATTCTGAGGCAACACCTAGCTTTGGTTCTTCACCTACACAGATAG

Protein sequence

MVQSQQVAAFSRRRERRRERRMGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR

Homology

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BLAST of CmoCh11G015530 vs. ExPASy Swiss-Prot
Match: Q9LPV9 (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 3.3e-190
Identity = 322/345 (93.33%), Postives = 332/345 (96.23%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MG +S+  QDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAI SLLEQYPNRVEI
Sbjct: 1   MGTSSDPIQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLD+S+GEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLR+WRI+DD S V
Sbjct: 61  VQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKS LN NKNSEFCGPLTSFDWN+AEP+RIGTSS DTTCTIWDIERE VDTQLIAHDKE
Sbjct: 121 ELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           V+DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFP LPVVELQRHQAS NAIAWAPHSSCHICTAGDDSQALIWD+SSM
Sbjct: 241 IIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           GQ VEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR
Sbjct: 301 GQHVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmoCh11G015530 vs. ExPASy Swiss-Prot
Match: Q38960 (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 3.8e-178
Identity = 301/345 (87.25%), Postives = 320/345 (92.75%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           M  +S+  Q+GS+EQ KRSEIYTYEAPW IYAMNWS+RRDKKYRLAI SL+EQYPNRVEI
Sbjct: 1   MVTSSDQIQNGSEEQSKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLD+S+GEIRSDPNL FEHPYPPTKT FIPDKECQRPDLLATSSDFLR+WRISDD S V
Sbjct: 61  VQLDESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKS L+ +KNSEF GP+TSFDWN+AEP+RIGTSSIDTTCTIWDIERE VDTQLIAHDKE
Sbjct: 121 ELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVS DGSVRVFDLRDKEHSTIIYES EP TPLVRL WNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           +IM SAK+VVLDIRFP LPVVELQRHQAS NAIAWAPHSS HIC+AGDDSQALIWD+SSM
Sbjct: 241 VIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           GQ VEGGLDPILAYTAGAE+EQLQWSSSQPDWVAIAFS KLQILR
Sbjct: 301 GQHVEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILR 345

[Close]

BLAST of CmoCh11G015530 vs. ExPASy Swiss-Prot
Match: Q9XGN1 (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.8e-124
Identity = 216/337 (64.09%), Postives = 264/337 (78.34%), Query Frame = 0


Query: 34  DEQQKRSEIYTYEAPWHIYAMNW-SVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIR 93
           D   +     TY++P+ +YAM + S+R    +R+A+ S LE Y NR++I+  D  S  ++
Sbjct: 7   DSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVK 66

Query: 94  SDPNLSFEHPYPPTKTIFIPDKECQRP---DLLATSSDFLRVWRISDDPSSVELKSLLNG 153
             PNLSFEHPYPPTK +F P    +RP   DLLA+S DFLR+W I++D S+VE  S+LN 
Sbjct: 67  PLPNLSFEHPYPPTKLMFSP-PSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNN 126

Query: 154 NKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWGG 213
           +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQLIAHDKEV+DIAWG 
Sbjct: 127 SKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGE 186

Query: 214 VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 273
             VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KV
Sbjct: 187 ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKV 246

Query: 274 VVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGL 333
           V+LDIR PT+PV EL+RHQAS NAIAWAP S  HIC+ GDD+QALIW+L ++  P   G+
Sbjct: 247 VILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP--NGI 306

Query: 334 DPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           DP+  Y+AG+EI QLQWSSSQPDW+ IAF+ K+Q+LR
Sbjct: 307 DPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLR 340

[Close]

BLAST of CmoCh11G015530 vs. ExPASy Swiss-Prot
Match: Q552R1 (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr68 PE=3 SV=2)

HSP 1 Score: 407.5 bits (1046), Expect = 1.6e-112
Identity = 196/330 (59.39%), Postives = 249/330 (75.45%), Query Frame = 0


Query: 38  KRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIRSDPNL 97
           ++  IYTY +PW IY ++WS R ++ +RLAI S LE Y NRV+++QL++ + +   +   
Sbjct: 2   EKKRIYTYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQF--EVVC 61

Query: 98  SFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSVELKSLLNGNKNSEFCG 157
            FEHPYPPTK ++IPDK   RPDLLAT+ D+LR+W +  +  S++LKSLL  N  SEFC 
Sbjct: 62  GFEHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLT-NVISEFCA 121

Query: 158 PLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWG-GVGVFASV 217
           PL+SFDWN+ +P  + TSSIDTTCTIW+IE     TQLIAHDKEV+DIA+  G  +FASV
Sbjct: 122 PLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASV 181

Query: 218 SADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF 277
            ADGS+R+FDLR+ EHSTIIYE+     PL+RL WNKQDP Y+ATI  DS KV++LDIR 
Sbjct: 182 GADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRV 241

Query: 278 PTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYT 337
           P++P  EL  H+++ N I+WAPHSSCHICT  DD QALIWDLSSM +P+E   DP+L Y 
Sbjct: 242 PSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE---DPLLTYN 301

Query: 338 AGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           A AEI QL WSSSQPDW+AIAFS+ LQIL+
Sbjct: 302 ALAEINQLSWSSSQPDWIAIAFSSHLQILK 324

[Close]

BLAST of CmoCh11G015530 vs. ExPASy Swiss-Prot
Match: P61962 (DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 6.1e-112
Identity = 201/344 (58.43%), Postives = 247/344 (71.80%), Query Frame = 0


Query: 38  KRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIRSDPNL 97
           KR EIY YEAPW +YAMNWSVR DK++RLA+ S +E+Y N+V++V LD+ S E       
Sbjct: 6   KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFIC--RN 65

Query: 98  SFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSVELKSLLNGNKNSEFCG 157
           +F+HPYP TK ++IPD +   PDLLATS D+LRVWR+ +  +   L+ LLN NKNS+FC 
Sbjct: 66  TFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGE--TETRLECLLNNNKNSDFCA 125

Query: 158 PLTSFDWNDAEPKRIGTSSIDTTCTIWDIERET-----------VDTQLIAHDKEVYDIA 217
           PLTSFDWN+ +P  +GTSSIDTTCTIW +E              V TQLIAHDKEVYDIA
Sbjct: 126 PLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIA 185

Query: 218 W----GGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATI 277
           +    GG  +FASV ADGSVR+FDLR  EHSTIIYE  +   PL+RL WNKQDP Y+AT+
Sbjct: 186 FSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATM 245

Query: 278 IMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSMG 337
            MD  +VV+LD+R P  PV  L  H+A  N IAWAPHSSCHICTA DD QALIWD+  M 
Sbjct: 246 AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMP 305

Query: 338 QPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           + +E   DPILAYTA  EI  +QW+S+QPDW+AI ++  L+ILR
Sbjct: 306 RAIE---DPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILR 341

[Close]

BLAST of CmoCh11G015530 vs. ExPASy TrEMBL
Match: A0A6J1JN20 (WD repeat-containing protein LWD1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486692 PE=4 SV=1)

HSP 1 Score: 728.8 bits (1880), Expect = 1.2e-206
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR 378
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR 356

[Close]

BLAST of CmoCh11G015530 vs. ExPASy TrEMBL
Match: A0A6J1EKJ7 (WD repeat-containing protein LWD1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435197 PE=4 SV=1)

HSP 1 Score: 728.8 bits (1880), Expect = 1.2e-206
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR 378
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR 356

[Close]

BLAST of CmoCh11G015530 vs. ExPASy TrEMBL
Match: A0A6J1JKU2 (WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486692 PE=4 SV=1)

HSP 1 Score: 707.6 bits (1825), Expect = 2.8e-200
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmoCh11G015530 vs. ExPASy TrEMBL
Match: A0A6J1ERG2 (WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435197 PE=4 SV=1)

HSP 1 Score: 707.6 bits (1825), Expect = 2.8e-200
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmoCh11G015530 vs. ExPASy TrEMBL
Match: A0A6J1D3C8 (WD repeat-containing protein LWD1 OS=Momordica charantia OX=3673 GN=LOC111016936 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 6.9e-199
Identity = 342/345 (99.13%), Postives = 343/345 (99.42%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MGANS+ NQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSDPNQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFPTLPVVELQRHQAS NAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmoCh11G015530 vs. NCBI nr
Match: XP_022928339.1 (WD repeat-containing protein LWD1 isoform X1 [Cucurbita moschata] >XP_022989680.1 WD repeat-containing protein LWD1 isoform X1 [Cucurbita maxima] >XP_023529990.1 WD repeat-containing protein LWD1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 728.8 bits (1880), Expect = 2.4e-206
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR 378
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR 356

[Close]

BLAST of CmoCh11G015530 vs. NCBI nr
Match: XP_038901322.1 (WD repeat-containing protein LWD1 isoform X1 [Benincasa hispida])

HSP 1 Score: 719.9 bits (1857), Expect = 1.1e-203
Identity = 351/356 (98.60%), Postives = 353/356 (99.16%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MGA+S+ NQD SDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGASSDPNQDASDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFPTLPVVELQRHQAS NAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR 378
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRQHLALVLHLHR 356

[Close]

BLAST of CmoCh11G015530 vs. NCBI nr
Match: XP_022928340.1 (WD repeat-containing protein LWD1 isoform X2 [Cucurbita moschata] >XP_022989681.1 WD repeat-containing protein LWD1 isoform X2 [Cucurbita maxima] >XP_023529991.1 WD repeat-containing protein LWD1 isoform X2 [Cucurbita pepo subsp. pepo] >KAG7022601.1 WD repeat-containing protein LWD1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 707.6 bits (1825), Expect = 5.8e-200
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmoCh11G015530 vs. NCBI nr
Match: KAG6588848.1 (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 707.6 bits (1825), Expect = 5.8e-200
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmoCh11G015530 vs. NCBI nr
Match: XP_022148224.1 (WD repeat-containing protein LWD1 [Momordica charantia])

HSP 1 Score: 703.0 bits (1813), Expect = 1.4e-198
Identity = 342/345 (99.13%), Postives = 343/345 (99.42%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MGANS+ NQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
Sbjct: 1   MGANSDPNQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV
Sbjct: 61  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
Sbjct: 121 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFPTLPVVELQRHQAS NAIAWAPHSSCHICTAGDDSQALIWDLSSM
Sbjct: 241 IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR
Sbjct: 301 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmoCh11G015530 vs. TAIR 10
Match: AT1G12910.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 665.6 bits (1716), Expect = 2.3e-191
Identity = 322/345 (93.33%), Postives = 332/345 (96.23%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           MG +S+  QDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAI SLLEQYPNRVEI
Sbjct: 1   MGTSSDPIQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLD+S+GEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLR+WRI+DD S V
Sbjct: 61  VQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKS LN NKNSEFCGPLTSFDWN+AEP+RIGTSS DTTCTIWDIERE VDTQLIAHDKE
Sbjct: 121 ELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           V+DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
Sbjct: 181 VFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           IIMDSAKVVVLDIRFP LPVVELQRHQAS NAIAWAPHSSCHICTAGDDSQALIWD+SSM
Sbjct: 241 IIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           GQ VEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR
Sbjct: 301 GQHVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmoCh11G015530 vs. TAIR 10
Match: AT3G26640.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 625.5 bits (1612), Expect = 2.7e-179
Identity = 301/345 (87.25%), Postives = 320/345 (92.75%), Query Frame = 0


Query: 22  MGANSEANQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI 81
           M  +S+  Q+GS+EQ KRSEIYTYEAPW IYAMNWS+RRDKKYRLAI SL+EQYPNRVEI
Sbjct: 1   MVTSSDQIQNGSEEQSKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEI 60

Query: 82  VQLDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSV 141
           VQLD+S+GEIRSDPNL FEHPYPPTKT FIPDKECQRPDLLATSSDFLR+WRISDD S V
Sbjct: 61  VQLDESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRV 120

Query: 142 ELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE 201
           ELKS L+ +KNSEF GP+TSFDWN+AEP+RIGTSSIDTTCTIWDIERE VDTQLIAHDKE
Sbjct: 121 ELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKE 180

Query: 202 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 261
           VYDIAWGGVGVFASVS DGSVRVFDLRDKEHSTIIYES EP TPLVRL WNKQDPRYMAT
Sbjct: 181 VYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMAT 240

Query: 262 IIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSM 321
           +IM SAK+VVLDIRFP LPVVELQRHQAS NAIAWAPHSS HIC+AGDDSQALIWD+SSM
Sbjct: 241 VIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSM 300

Query: 322 GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           GQ VEGGLDPILAYTAGAE+EQLQWSSSQPDWVAIAFS KLQILR
Sbjct: 301 GQHVEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILR 345

[Close]

BLAST of CmoCh11G015530 vs. TAIR 10
Match: AT5G24520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 447.2 bits (1149), Expect = 1.3e-125
Identity = 216/337 (64.09%), Postives = 264/337 (78.34%), Query Frame = 0


Query: 34  DEQQKRSEIYTYEAPWHIYAMNW-SVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIR 93
           D   +     TY++P+ +YAM + S+R    +R+A+ S LE Y NR++I+  D  S  ++
Sbjct: 7   DSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVK 66

Query: 94  SDPNLSFEHPYPPTKTIFIPDKECQRP---DLLATSSDFLRVWRISDDPSSVELKSLLNG 153
             PNLSFEHPYPPTK +F P    +RP   DLLA+S DFLR+W I++D S+VE  S+LN 
Sbjct: 67  PLPNLSFEHPYPPTKLMFSP-PSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNN 126

Query: 154 NKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWGG 213
           +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQLIAHDKEV+DIAWG 
Sbjct: 127 SKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGE 186

Query: 214 VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 273
             VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KV
Sbjct: 187 ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKV 246

Query: 274 VVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGL 333
           V+LDIR PT+PV EL+RHQAS NAIAWAP S  HIC+ GDD+QALIW+L ++  P   G+
Sbjct: 247 VILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP--NGI 306

Query: 334 DPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           DP+  Y+AG+EI QLQWSSSQPDW+ IAF+ K+Q+LR
Sbjct: 307 DPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLR 340

[Close]

BLAST of CmoCh11G015530 vs. TAIR 10
Match: AT5G24520.3 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 447.2 bits (1149), Expect = 1.3e-125
Identity = 216/337 (64.09%), Postives = 264/337 (78.34%), Query Frame = 0


Query: 34  DEQQKRSEIYTYEAPWHIYAMNW-SVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIR 93
           D   +     TY++P+ +YAM + S+R    +R+A+ S LE Y NR++I+  D  S  ++
Sbjct: 7   DSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVK 66

Query: 94  SDPNLSFEHPYPPTKTIFIPDKECQRP---DLLATSSDFLRVWRISDDPSSVELKSLLNG 153
             PNLSFEHPYPPTK +F P    +RP   DLLA+S DFLR+W I++D S+VE  S+LN 
Sbjct: 67  PLPNLSFEHPYPPTKLMFSP-PSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNN 126

Query: 154 NKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWGG 213
           +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQLIAHDKEV+DIAWG 
Sbjct: 127 SKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGE 186

Query: 214 VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 273
             VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KV
Sbjct: 187 ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKV 246

Query: 274 VVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGL 333
           V+LDIR PT+PV EL+RHQAS NAIAWAP S  HIC+ GDD+QALIW+L ++  P   G+
Sbjct: 247 VILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP--NGI 306

Query: 334 DPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           DP+  Y+AG+EI QLQWSSSQPDW+ IAF+ K+Q+LR
Sbjct: 307 DPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLR 340

[Close]

BLAST of CmoCh11G015530 vs. TAIR 10
Match: AT5G24520.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 447.2 bits (1149), Expect = 1.3e-125
Identity = 216/337 (64.09%), Postives = 264/337 (78.34%), Query Frame = 0


Query: 34  DEQQKRSEIYTYEAPWHIYAMNW-SVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIR 93
           D   +     TY++P+ +YAM + S+R    +R+A+ S LE Y NR++I+  D  S  ++
Sbjct: 7   DSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVK 66

Query: 94  SDPNLSFEHPYPPTKTIFIPDKECQRP---DLLATSSDFLRVWRISDDPSSVELKSLLNG 153
             PNLSFEHPYPPTK +F P    +RP   DLLA+S DFLR+W I++D S+VE  S+LN 
Sbjct: 67  PLPNLSFEHPYPPTKLMFSP-PSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNN 126

Query: 154 NKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWGG 213
           +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQLIAHDKEV+DIAWG 
Sbjct: 127 SKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGE 186

Query: 214 VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 273
             VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KV
Sbjct: 187 ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKV 246

Query: 274 VVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGL 333
           V+LDIR PT+PV EL+RHQAS NAIAWAP S  HIC+ GDD+QALIW+L ++  P   G+
Sbjct: 247 VILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP--NGI 306

Query: 334 DPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 367
           DP+  Y+AG+EI QLQWSSSQPDW+ IAF+ K+Q+LR
Sbjct: 307 DPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLR 340

The following BLAST results are available for this feature:

BLAST of CmoCh11G015530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPV9	3.3e-190	93.33	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 S...	[more]
Q38960	3.8e-178	87.25	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 S...	[more]
Q9XGN1	1.8e-124	64.09	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 ...	[more]
Q552R1	1.6e-112	59.39	DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 ...	[more]
P61962	6.1e-112	58.43	DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1	[more]

BLAST of CmoCh11G015530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JN20	1.2e-206	100.00	WD repeat-containing protein LWD1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1EKJ7	1.2e-206	100.00	WD repeat-containing protein LWD1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1JKU2	2.8e-200	100.00	WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1ERG2	2.8e-200	100.00	WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1D3C8	6.9e-199	99.13	WD repeat-containing protein LWD1 OS=Momordica charantia OX=3673 GN=LOC111016936...	[more]

BLAST of CmoCh11G015530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928339.1	2.4e-206	100.00	WD repeat-containing protein LWD1 isoform X1 [Cucurbita moschata] >XP_022989680....	[more]
XP_038901322.1	1.1e-203	98.60	WD repeat-containing protein LWD1 isoform X1 [Benincasa hispida]	[more]
XP_022928340.1	5.8e-200	100.00	WD repeat-containing protein LWD1 isoform X2 [Cucurbita moschata] >XP_022989681....	[more]
KAG6588848.1	5.8e-200	100.00	Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, partial [Cucurbita ar...	[more]
XP_022148224.1	1.4e-198	99.13	WD repeat-containing protein LWD1 [Momordica charantia]	[more]

BLAST of CmoCh11G015530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12910.1	2.3e-191	93.33	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	2.7e-179	87.25	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.1	1.3e-125	64.09	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.3	1.3e-125	64.09	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.2	1.3e-125	64.09	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 277..317 e-value: 6.6E-5 score: 32.3 coord: 188..226 e-value: 2.6E-4 score: 30.4 coord: 140..185 e-value: 0.57 score: 18.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 284..320 score: 9.97376
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 13..366 e-value: 4.7E-38 score: 133.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 33..366
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 304..318
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 77..325

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G015530.1	CmoCh11G015530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding