CmoCh11G015290 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G015290
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Transmembrane emp24 domain-containing protein
Location	Cmo_Chr11: 10925077 .. 10930555 (+)
RNA-Seq Expression	CmoCh11G015290
Synteny	CmoCh11G015290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTCTAAAAACATCGTGCGAAAGAGGGTTGAATTGGAAACGAAGCAAGAGTCAAAGTAAAAATTCAAGAACAGTGCGAGAGAGATAGAGAGAATCGGAGAAGACAGCAATGGAGCGACGGAGGATGATTCTGCCTTCTTTGCTGTTGATTTTGAGCTTTTTGGCGGCGGATCTTGTGCGCCCCACCCATGCTATTTGGTTCAACCTTCCTTCTACTGGAACCAAGTGTGTGTCTGAGGAAATCCATAACAACGTCGTTGTTTTGGCTGATTATGTTGTGATCTCTGAGAATTATACCCATGCGCCCACCGTCTCCGTCAAGGTGAACTACCTCTGCTATCTTTTTCCCCTGGATCGGTCAACGCTAGGGTTTTTTGATGATTTTGTTTTATTTTCTTTCTGGATGTGTCTGGTTAATTGAAGAATCACTGCGATGAACTGAAATTACGGAATATTTTGATTGCTTATCTTGGACGGATCGAATACAGATCTTTTCGTTTTTCTCAGATTTTGTAGTGTTGTATTATGCACGAATATGGTGGAAAATGGATGTTATTGGTGCCGGGTGGGCGTTGGGTGCTGTTAGAAACATCCACGTTCACATACATTCAATAGTAGACTGACTGATAAAAAGGACAATGTGATTGTTGGAACAGTGGGGCTTCTTCTTTGTGCCTGTTGGGTTCTCTTGACTTGAGTTTTAGTTCTTATGATATAATTGATTTCGTTTTGGGGCTCTTCCCTTAGTCACTTGGGCTTTTGTAGATTTTAAAGTTAACTTCCACCCAGCTCGTTTGTTTCTCTTTAAATTAGAAGAATCACCAGATTTATTTTGAACGGATTTGAAGAAATGTTCGAAGACACAATAAATCAGATCTTTTCCCTGCTGAAACAACCTGCCGATTTCTTGATCTATGTTTTTCTTGATCTATGTTTTTGTATCATTGGCTTAATATTCCATTTGTATATTTTCCCTCTCTAAGGTAACATCACCATACGGGAACAACCTCTACCACAAGGAGAATCAAACAAATGGGCAGTTTGCATTCACCACAGCAGAGGCTGGCAACCATTTGGCATGCTTTTGGATTGATGGCCATCATGAGCGTGGTGGTGATGTTAGCTTAAGTCTTGAATGGAGAACTGGAATTACAGCTAAGGATTGGGAATCAGTTGCGAGAAAGGAAAAAATTGAGGTGCGTTTTACACTCTTAAACTGATGCATACACTTCCAATATATGTTGACATTGACTTGCCATTTACTGGATGGTTGAAAAAAGTATCTATTTAGAGATTTACTTACTATAGGATTACAAAGCCACTGAAGTCTTATTGATATTTGTTTGCATATCAATCCAATTGTAACTCATGGTTTATGTATGTGCCAAGCCCTTCGTTCTCTCACAAAATAGAACTGACGTGGTTAAAATGCCAACATTAAGACAGTGAACCTGCTGATTATGCAGCTCAGCTATGATATTTTCATTGAAGTTGGTACACTTAAAGGCTTTTAGAAAGGGACATAACAGAACTTCAGTGTTGAACATTTGGTCTTTAACTGAAGTTCTGAATCATGTATCATGACTTTAATAACTGTAAAGAGCAGCCATTGTATGGACTAAAGATAGAAAATCTTGGATTGAGGCTTTACTCTTCCTCTTTTAAATTACAATCATTGATGAAATGTTTTGTTTCTTCTAAAAAGAAACGGCTAGCATCTTTGTATTTTTGTTTGTCCCTCCTTTTTCATTTTCTGGAGTCATCTTTTGACTGGTCTAATTTTAGTTTATCCAATTGTTCAGTTTTAACGTAGGTTTCATTTGAATAATTTTGTGCTCGGTGGGAGTTAGTCGGTAAAGGAATGTTCTTACAAAAAATAAGCACATTTTTTTGGTTGCATATGGCTGAGTTAATTTTTTTGAGGTGGACTAGGATGCAATAGCTATTTGGAGTTTTGACTTGAGGTGTGGGAAAGAGAAACAGTTAGTGTTCAAATTAAGATTTAACAACTAAGAGAATTTGTTTGCTTTTGATAATAATAAAATTGAGAGCTTGATTGTGTTGGGAATTAGATACTTGTGTCATACACGCCCCAAAAATGGATTTATAAAAAATCTCAATTGGAAAAAGAAAATATCACAGTACCATTATAGTTATACAAATCTTTTGACAAATTACACGAAGTAGAGAGGAGTCTAAATCCAAGATTCCAACCTCAGTGTTCCTCATACTGCTGTTCCACATACCACCGATCCACAAAGAAGCCAATGGAACCAACAATTTTGTTAAATCTTAGGAAAGGCAACTGCAAGGGAATATCAAGGACCCAAAAATCCTCCTAAAACAAGATTATATCACCCTTTACAAAGAAGATAATTTTCACTGAAACAGTGTTTCTTGAGATAGGGCTACATGCTTTTGGAGTTTGAAGCACCTCTAGCTTGCACTATCCAATTACCTGAGACTAACTAGTGTTTACTATCTTTGTAGTGAGTAGAACCCTTCTAGCTGCTGATTAGTTCCCCTTCACTTGTGAAGGAGAGGTTCCCATTCCACGGCAGTTTTGTCAACAAATATATTTTGGGTCGGAAACTTCGTTCTCAAAAGAGGGGATGCAATCATCGTGAATTCCTCCTTAGGGCATTAATTTCTATCTAAAGTTTATAAGCTCAGTCATTTAGCAAGGGTGCTTAAAAATAGGGGGAGTTAGGGAGTACAATTTTTTTTTTTTTTTTTTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTTTTTTTTTTTTTTTTTTGGAGGGGGTGGTGGGGTGGGGGAGTTTTCTTCGAAGTCCAGACCTCTCAAGTGCTAGTGGTTGGGTATTATTGTTTCATTTTATATTGTAAACAACTTTGAGGTTATTTTCAATATCGGAGTCCTATCAATTGCTGGTCTTCTTGGGCTTGTAATACCAATTTAAGAAGCTTCTTGTGTTCTTGGAAGGTGTGGCTATGAACAAACCTTAGAAGAGTGCTAAAGCACTTGGTTTGAGATTTGAGAAGTAAATGATTTTATCCTTGTCCAACTTGTTCATCTCCTTTCCCCAGGTGCAATTAGGACAATGGACACTGACTTCCCTTGATATTGATATGTTCCATATTTAGGTAGACTATTCCTCTTTTCCATCCCGTGCACTGCCTGCATACTTAGTACCGGTCTGATTGGATCAAACATTCAAACCTTGACTTGTACTTCTACCTTCAACCATTCACAAAACTACTCTCCAAGACTTCCTTTGATATATCAGACAAAAACACGACAAAGATTTCAGAAAGCTTCGAATACTCTCTTTTTGGATAAGAAAATTTCATTGATAGTATGAAATTACAAAAGATGGGGAGAATCCAAAAGGATAGTTACAAAAGACCTCTCCAATTGGTTTAGAGGGTAGCAAAGCTATAGTAATGGAATGGAAGAGAGTATTTACACCAAGTCACGACTGTATTAATTATAGCCTAAAAAAATCTAAAGTAGGATAATTCCTTTTCTTGAAAGATTCTTCTGTTTCTTTCTCACCAAATGTTCCAGCAAAAAGCTCTAATAGATTTCTCCCATAAATTCTTCTTCGTCCTTGTGAAAGAGTGTCCTCCATGGGTGAATTAAGGGAGAACATGTGGATTTTCTGAGAGGACCATATGCCAGTTGAATGTCGAGCTTCCAATCCTCTCTCATGCTGCCTTCTTGTCATGCAGCAACAACTTTCTGCACTGGGATTCTTCTTTGAGGAAGGAAATTGAGTTAGTAGTAGAGCTTTAGTTTCTACCCAAGTCTGTATTGGTCTTCCACAATCAGCCCTTTGGAACCCTTTTGCTTCTGAAAAAAAAAAAAAAAATCTCACATTCATTTCCAAGGAATCCTTTGGACGACATTCCGGAGGGCACTCAATCCTTATTGTACATCAGCTAGCACTACTGTTGTTTTGTGTTTGTGTGTGTGTGTGTGTTTACTTTAATTTTTATTGGGATACGGAGAAAGGTACTATTAACAAGTGGAACCAAACAAAAGAAGGGAGATGAGGTATCATCCCCACAAGGCCAAAGGGTTAAAAAACGAGTCCGAATTGGCCAGAATCTATGCAAGATCGTAATTACAAAAAATTAATCCAAGGAACACAAGTGGAAGCATATAACATAAGAGGATTAGATGAGAGCAATGGTTGAAGACCATGAGGGATGGAGACTGAAGACTAAGAGAGAGCTCACTAAGATTAGGATGGAAAATTATGTTTTCAACCAAGCATCATGTCGAAAAACTTCAACCATTTTTTTCTTTAAAACGAACACCAACGCAGGTGCCTCAATAGCTTGTCAAAACATTTCAATATGTGTCTTAGTGCGTACTGAATCAAAACAAAACTCTGTATTTGCACGTGTATGCGCTTGACGTCTAAGCACATTTTTAAATCACTAACTAGGATGATAAGTTTCTATTCTTCGATTTACCACTGAGAATTTCTCTTATATTTTGGAAATTAACCTTTAAGTTTTCCAAATCGCTATCTTGTAGGGTGTTGAGCTCGAGCTCCGGAAACTCGAAGGCGTGGTAGAGGCTATTCATGAGAACATTTTGTACCTAAAAGAAAGGTAATCTACGATGGAAAAACTATTCAAATTCTCTACAAAATTTTCTCCATGAATGTTTTGAGTAACTATTTGGTGTAATGTATATATGAACCACACAGGGAAGCAGAAATGAGGATAGTAAGTGAGAAAACAAATGGAAGAGTGGCGTGGTTTAGCATAATGTCTTTGGGTGTTTGTATTTTGGCTTCAACACTTCAACTGTGGTACTTGAAGCGATTCTTCCAGAAAAAGAAGCTCATTTAAAACAGTAATCCATCTTCTTTCTTGTTCTCTGAATTTCTTTTCTTACAATCTAGCATCACACAAATCTTATAGTTACAGAATTGTTTCATCACGGATTTTCGTTTAAATTCATTATCTTATGAGCCTTAGGTACCTCGATAGTCTGCGATGTTGAATATTACTTATTTGTTACTCGTTCAAAACGCGTCTTATTTCTAAGGAATCTAACACATTACCAGTTTATCTATGATATAGCCAATTTATTTGTGTTGCTTGTCAAA

mRNA sequence

GTTTTCTAAAAACATCGTGCGAAAGAGGGTTGAATTGGAAACGAAGCAAGAGTCAAAGTAAAAATTCAAGAACAGTGCGAGAGAGATAGAGAGAATCGGAGAAGACAGCAATGGAGCGACGGAGGATGATTCTGCCTTCTTTGCTGTTGATTTTGAGCTTTTTGGCGGCGGATCTTGTGCGCCCCACCCATGCTATTTGGTTCAACCTTCCTTCTACTGGAACCAAGTGTGTGTCTGAGGAAATCCATAACAACGTCGTTGTTTTGGCTGATTATGTTGTGATCTCTGAGAATTATACCCATGCGCCCACCGTCTCCGTCAAGGTAACATCACCATACGGGAACAACCTCTACCACAAGGAGAATCAAACAAATGGGCAGTTTGCATTCACCACAGCAGAGGCTGGCAACCATTTGGCATGCTTTTGGATTGATGGCCATCATGAGCGTGGTGGTGATGTTAGCTTAAGTCTTGAATGGAGAACTGGAATTACAGCTAAGGATTGGGAATCAGTTGCGAGAAAGGAAAAAATTGAGGGTGTTGAGCTCGAGCTCCGGAAACTCGAAGGCGTGGTAGAGGCTATTCATGAGAACATTTTGTACCTAAAAGAAAGGGAAGCAGAAATGAGGATAGTAAGTGAGAAAACAAATGGAAGAGTGGCGTGGTTTAGCATAATGTCTTTGGGTGTTTGTATTTTGGCTTCAACACTTCAACTGTGGTACTTGAAGCGATTCTTCCAGAAAAAGAAGCTCATTTAAAACAGTAATCCATCTTCTTTCTTGTTCTCTGAATTTCTTTTCTTACAATCTAGCATCACACAAATCTTATAGTTACAGAATTGTTTCATCACGGATTTTCGTTTAAATTCATTATCTTATGAGCCTTAGGTACCTCGATAGTCTGCGATGTTGAATATTACTTATTTGTTACTCGTTCAAAACGCGTCTTATTTCTAAGGAATCTAACACATTACCAGTTTATCTATGATATAGCCAATTTATTTGTGTTGCTTGTCAAA

Coding sequence (CDS)

ATGGAGCGACGGAGGATGATTCTGCCTTCTTTGCTGTTGATTTTGAGCTTTTTGGCGGCGGATCTTGTGCGCCCCACCCATGCTATTTGGTTCAACCTTCCTTCTACTGGAACCAAGTGTGTGTCTGAGGAAATCCATAACAACGTCGTTGTTTTGGCTGATTATGTTGTGATCTCTGAGAATTATACCCATGCGCCCACCGTCTCCGTCAAGGTAACATCACCATACGGGAACAACCTCTACCACAAGGAGAATCAAACAAATGGGCAGTTTGCATTCACCACAGCAGAGGCTGGCAACCATTTGGCATGCTTTTGGATTGATGGCCATCATGAGCGTGGTGGTGATGTTAGCTTAAGTCTTGAATGGAGAACTGGAATTACAGCTAAGGATTGGGAATCAGTTGCGAGAAAGGAAAAAATTGAGGGTGTTGAGCTCGAGCTCCGGAAACTCGAAGGCGTGGTAGAGGCTATTCATGAGAACATTTTGTACCTAAAAGAAAGGGAAGCAGAAATGAGGATAGTAAGTGAGAAAACAAATGGAAGAGTGGCGTGGTTTAGCATAATGTCTTTGGGTGTTTGTATTTTGGCTTCAACACTTCAACTGTGGTACTTGAAGCGATTCTTCCAGAAAAAGAAGCTCATTTAA

Protein sequence

MERRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISENYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLSLEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTNGRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI

Homology

[Close]

BLAST of CmoCh11G015290 vs. ExPASy Swiss-Prot
Match: Q6IDL4 (Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana OX=3702 GN=At1g09580 PE=1 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.2e-73
Identity = 136/213 (63.85%), Postives = 171/213 (80.28%), Query Frame = 0


Query: 3   RRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISENY 62
           + R   P+  L+L FL   ++    A+W ++P TGTKCVSEEI +NVVVLADY++ISE++
Sbjct: 6   KMRREFPTAFLLL-FLVPVMIPVGEAVWLDVPPTGTKCVSEEIQSNVVVLADYLIISEDH 65

Query: 63  THAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLSLE 122
              PT+SVKVTSPYGNNL++ EN T+GQFAFTT E+GN+LACFW D       +VS++++
Sbjct: 66  EVMPTISVKVTSPYGNNLHNMENVTHGQFAFTTQESGNYLACFWADEKSHGNKNVSINID 125

Query: 123 WRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTNGR 182
           WRTGI AKDW S+A+KEKIEGVELE+RKLEG VEAIHENILYL+ REA+MR +SEKTN R
Sbjct: 126 WRTGIAAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSR 185

Query: 183 VAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
           VAW+SIMSLGVCI  S  Q+ YLK++F+KKKLI
Sbjct: 186 VAWYSIMSLGVCIAVSGFQVLYLKQYFEKKKLI 217

[Close]

BLAST of CmoCh11G015290 vs. ExPASy Swiss-Prot
Match: Q9FVU0 (Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana OX=3702 GN=CYB PE=1 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.8e-71
Identity = 133/212 (62.74%), Postives = 170/212 (80.19%), Query Frame = 0


Query: 4   RRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISENYT 63
           ++ ++P+ +L LS L   L     A+W  +P TG+KCVSEEI +NV+VLADY+VISE ++
Sbjct: 2   KKKMIPTTIL-LSALIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADYLVISEEHS 61

Query: 64  HAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLSLEW 123
             PTVSVKVT+PYG  L+H+EN TNGQFAFTT E+G +LACF  D       D S++++W
Sbjct: 62  IFPTVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDFSINIDW 121

Query: 124 RTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTNGRV 183
           +TGI AKDW+S+ARKEKIEGVELE +KLEG VEAIHEN++YL+ REAEMRIVSEKTN RV
Sbjct: 122 KTGIAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRV 181

Query: 184 AWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
           AW+SIMSLG+CI+ S LQ+ YLK++F+KKKLI
Sbjct: 182 AWYSIMSLGICIVVSGLQILYLKQYFEKKKLI 212

[Close]

BLAST of CmoCh11G015290 vs. ExPASy Swiss-Prot
Match: Q8RWM6 (Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana OX=3702 GN=At1g21900 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.4e-67
Identity = 132/207 (63.77%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 11  LLLILSFLAADLVRPTHAIWFNLPST-GTKCVSEEIHNNVVVLADYVVISE-NYTHAPTV 70
           L ++L FL    V    AIW  +P+T GTKCVSEEI +NVVVLADY V+ E N  + P V
Sbjct: 13  LTVVLFFLT---VNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNPENTPAV 72

Query: 71  SVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLSLEWRTGIT 130
           S KVTSPYGNNL+H+EN T+GQFAFTT EAGN+LACFWID  H     ++L ++W+ GI 
Sbjct: 73  SSKVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWIDSSHHLANPITLGVDWKMGIA 132

Query: 131 AKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTNGRVAWFSI 190
           AKDW+SVA+KEKIEGVEL+LR+LEG+V +I EN+ Y+K+REAEMR VSE TN RVAWFSI
Sbjct: 133 AKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVAWFSI 192

Query: 191 MSLGVCILASTLQLWYLKRFFQKKKLI 216
           MSLGVC++    Q+ YLKR+F KKKLI
Sbjct: 193 MSLGVCVVVVGSQILYLKRYFHKKKLI 216

[Close]

BLAST of CmoCh11G015290 vs. ExPASy Swiss-Prot
Match: F4J4Y0 (Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana OX=3702 GN=At3g10780 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.2e-49
Identity = 111/215 (51.63%), Postives = 140/215 (65.12%), Query Frame = 0


Query: 7   ILPSLLLILSFLA--ADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISENYTH 66
           I P L + L +LA    L     AIW  +P +G +CV EEI  NVVV+ DY+ I + +T 
Sbjct: 3   ISPVLFIGLIYLAGGGSLFPGVEAIWLTVPESGERCVYEEIQANVVVVLDYICIDDAFTQ 62

Query: 67  -APTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWI---DGHHERGGDVSLS 126
             PT+ V+VTSPYG  LY   N T+GQ AFTT+E+G  LAC  +     HH     V +S
Sbjct: 63  LGPTLDVRVTSPYGKELYKIANVTHGQAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVS 122

Query: 127 LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN 186
           L+W+ GI AKDW+SVA+KEKIEGVELE+R+      AI  NILYL+ REA MR ++EKTN
Sbjct: 123 LDWKMGIRAKDWDSVAKKEKIEGVELEIRRSTEYASAIRANILYLRIREAYMREINEKTN 182

Query: 187 GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
            RV    +MSLGV I+ S  Q+ YLKR+F KKKLI
Sbjct: 183 TRVNQLGLMSLGVAIVVSISQVLYLKRYFLKKKLI 217

[Close]

BLAST of CmoCh11G015290 vs. ExPASy Swiss-Prot
Match: Q9LQY3 (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana OX=3702 GN=At1g26690 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.8e-39
Identity = 84/211 (39.81%), Postives = 138/211 (65.40%), Query Frame = 0


Query: 10  SLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISENYTH----A 69
           +L  IL FLA    + + ++ F L S  TKC+SE+I +N + +  Y V++ N  H    +
Sbjct: 7   NLCTILLFLAIS-SQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQS 66

Query: 70  PTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFW-IDGHHERGGDVSLSLEWR 129
             +S++VTS YGN  +H E+  +GQFAFT  E+G+++AC+  +D  H+    +S+  +WR
Sbjct: 67  HKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVD--HKPEVTLSIDFDWR 126

Query: 130 TGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTNGRVA 189
           TG+ +K W SVA+K ++E +E ++++L   V +IHE + YL+ERE EM+ ++  TN ++A
Sbjct: 127 TGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKMA 186

Query: 190 WFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
           W S +SL VC+  + +Q  +LK FF+KKK+I
Sbjct: 187 WLSFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214

[Close]

BLAST of CmoCh11G015290 vs. ExPASy TrEMBL
Match: A0A6J1EQ97 (transmembrane emp24 domain-containing protein p24delta4-like OS=Cucurbita moschata OX=3662 GN=LOC111434689 PE=3 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 8.4e-117
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MERRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISE 60
           MERRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISE
Sbjct: 1   MERRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISE 60

Query: 61  NYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLS 120
           NYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLS
Sbjct: 61  NYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLS 120

Query: 121 LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN 180
           LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN
Sbjct: 121 LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN 180

Query: 181 GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
           GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI
Sbjct: 181 GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 215

[Close]

BLAST of CmoCh11G015290 vs. ExPASy TrEMBL
Match: A0A6J1JR63 (transmembrane emp24 domain-containing protein p24delta4-like OS=Cucurbita maxima OX=3661 GN=LOC111486723 PE=3 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.4e-116
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MERRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISE 60
           ME+RRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISE
Sbjct: 1   MEQRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISE 60

Query: 61  NYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLS 120
           NYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLS
Sbjct: 61  NYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLS 120

Query: 121 LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN 180
           LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN
Sbjct: 121 LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN 180

Query: 181 GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
           GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI
Sbjct: 181 GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 215

[Close]

BLAST of CmoCh11G015290 vs. ExPASy TrEMBL
Match: A0A6J1HR23 (transmembrane emp24 domain-containing protein p24delta3-like OS=Cucurbita maxima OX=3661 GN=LOC111467003 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.6e-102
Identity = 185/215 (86.05%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 1   MERRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISE 60
           ME R+MILP LLL+L+FLA DLVRPTHAIW N+PSTGTKCVSEEI +NVVV+ADYVVISE
Sbjct: 1   MEPRKMILPCLLLVLTFLATDLVRPTHAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISE 60

Query: 61  NYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLS 120
           NYTH PT+SVKVTSPYGNNL++KENQT+GQFAFTTAEAGNHLACFWIDGH++ GGD SL+
Sbjct: 61  NYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGGDASLN 120

Query: 121 LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN 180
           LEWRTGI+AKDWESVA+KEKIEGVELELRKLEG+VEAIH N+LYLK REA+MRIVSEKTN
Sbjct: 121 LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN 180

Query: 181 GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
           GRVAWFSIMSLGVCILAS LQLWYL RFFQKKKLI
Sbjct: 181 GRVAWFSIMSLGVCILASALQLWYLTRFFQKKKLI 215

[Close]

BLAST of CmoCh11G015290 vs. ExPASy TrEMBL
Match: A0A6J1HGJ9 (transmembrane emp24 domain-containing protein p24delta3-like OS=Cucurbita moschata OX=3662 GN=LOC111464101 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.9e-101
Identity = 185/215 (86.05%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 1   MERRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISE 60
           ME R+MILP LLLIL+FLA DLVRPT+AIW N+PSTGTKCVSEEI +NVVV+ADYVVISE
Sbjct: 1   MEPRKMILPCLLLILTFLATDLVRPTYAIWLNIPSTGTKCVSEEIQSNVVVMADYVVISE 60

Query: 61  NYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLS 120
           NYTH PT+SVKVTSPYGNNL++KENQT+GQFAFTTAEAGNHLACFWIDGH++ G D SL+
Sbjct: 61  NYTHTPTISVKVTSPYGNNLHYKENQTSGQFAFTTAEAGNHLACFWIDGHNQGGADASLN 120

Query: 121 LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN 180
           LEWRTGI+AKDWESVA+KEKIEGVELELRKLEG+VEAIH N+LYLK REA+MRIVSEKTN
Sbjct: 121 LEWRTGISAKDWESVAKKEKIEGVELELRKLEGLVEAIHGNLLYLKRREADMRIVSEKTN 180

Query: 181 GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
           GRVAWFSIMSLGVCILAS LQLWYLKRFFQKKKLI
Sbjct: 181 GRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI 215

[Close]

BLAST of CmoCh11G015290 vs. ExPASy TrEMBL
Match: A0A6J1DNY9 (transmembrane emp24 domain-containing protein p24delta3-like OS=Momordica charantia OX=3673 GN=LOC111022163 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.4e-101
Identity = 185/215 (86.05%), Postives = 202/215 (93.95%), Query Frame = 0


Query: 1   MERRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISE 60
           M RR M+LPSLLL+L+FLA DLV P+HAIW NLPS+GTKCVSEEI +NVVVLADYVVISE
Sbjct: 1   MARRGMMLPSLLLLLTFLAMDLVPPSHAIWLNLPSSGTKCVSEEIQSNVVVLADYVVISE 60

Query: 61  NYTHAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLS 120
           NYTH+PT+SVKVTSPYGNNL+ KE QT+GQFAFTTAE GNHLACFWIDG+HE GGDVSL+
Sbjct: 61  NYTHSPTISVKVTSPYGNNLHQKEKQTSGQFAFTTAEGGNHLACFWIDGNHEGGGDVSLN 120

Query: 121 LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN 180
           L+WRTGI+AKDWESVARKEKIEGVELELRKLEG VEAIHEN+LYLK REA+MR+VSEKTN
Sbjct: 121 LDWRTGISAKDWESVARKEKIEGVELELRKLEGAVEAIHENLLYLKSREADMRMVSEKTN 180

Query: 181 GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
           GRVAWFSIMSLGVCILAS LQLWYLKRFFQKKKLI
Sbjct: 181 GRVAWFSIMSLGVCILASALQLWYLKRFFQKKKLI 215

[Close]

BLAST of CmoCh11G015290 vs. TAIR 10
Match: AT1G09580.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 275.8 bits (704), Expect = 3.0e-74
Identity = 136/213 (63.85%), Postives = 171/213 (80.28%), Query Frame = 0


Query: 3   RRRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISENY 62
           + R   P+  L+L FL   ++    A+W ++P TGTKCVSEEI +NVVVLADY++ISE++
Sbjct: 6   KMRREFPTAFLLL-FLVPVMIPVGEAVWLDVPPTGTKCVSEEIQSNVVVLADYLIISEDH 65

Query: 63  THAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLSLE 122
              PT+SVKVTSPYGNNL++ EN T+GQFAFTT E+GN+LACFW D       +VS++++
Sbjct: 66  EVMPTISVKVTSPYGNNLHNMENVTHGQFAFTTQESGNYLACFWADEKSHGNKNVSINID 125

Query: 123 WRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTNGR 182
           WRTGI AKDW S+A+KEKIEGVELE+RKLEG VEAIHENILYL+ REA+MR +SEKTN R
Sbjct: 126 WRTGIAAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSR 185

Query: 183 VAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
           VAW+SIMSLGVCI  S  Q+ YLK++F+KKKLI
Sbjct: 186 VAWYSIMSLGVCIAVSGFQVLYLKQYFEKKKLI 217

[Close]

BLAST of CmoCh11G015290 vs. TAIR 10
Match: AT1G57620.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 270.4 bits (690), Expect = 1.2e-72
Identity = 133/212 (62.74%), Postives = 170/212 (80.19%), Query Frame = 0


Query: 4   RRMILPSLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISENYT 63
           ++ ++P+ +L LS L   L     A+W  +P TG+KCVSEEI +NV+VLADY+VISE ++
Sbjct: 2   KKKMIPTTIL-LSALIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADYLVISEEHS 61

Query: 64  HAPTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLSLEW 123
             PTVSVKVT+PYG  L+H+EN TNGQFAFTT E+G +LACF  D       D S++++W
Sbjct: 62  IFPTVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDFSINIDW 121

Query: 124 RTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTNGRV 183
           +TGI AKDW+S+ARKEKIEGVELE +KLEG VEAIHEN++YL+ REAEMRIVSEKTN RV
Sbjct: 122 KTGIAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRV 181

Query: 184 AWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
           AW+SIMSLG+CI+ S LQ+ YLK++F+KKKLI
Sbjct: 182 AWYSIMSLGICIVVSGLQILYLKQYFEKKKLI 212

[Close]

BLAST of CmoCh11G015290 vs. TAIR 10
Match: AT1G21900.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 256.1 bits (653), Expect = 2.4e-68
Identity = 132/207 (63.77%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 11  LLLILSFLAADLVRPTHAIWFNLPST-GTKCVSEEIHNNVVVLADYVVISE-NYTHAPTV 70
           L ++L FL    V    AIW  +P+T GTKCVSEEI +NVVVLADY V+ E N  + P V
Sbjct: 13  LTVVLFFLT---VNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNPENTPAV 72

Query: 71  SVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWIDGHHERGGDVSLSLEWRTGIT 130
           S KVTSPYGNNL+H+EN T+GQFAFTT EAGN+LACFWID  H     ++L ++W+ GI 
Sbjct: 73  SSKVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWIDSSHHLANPITLGVDWKMGIA 132

Query: 131 AKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTNGRVAWFSI 190
           AKDW+SVA+KEKIEGVEL+LR+LEG+V +I EN+ Y+K+REAEMR VSE TN RVAWFSI
Sbjct: 133 AKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVAWFSI 192

Query: 191 MSLGVCILASTLQLWYLKRFFQKKKLI 216
           MSLGVC++    Q+ YLKR+F KKKLI
Sbjct: 193 MSLGVCVVVVGSQILYLKRYFHKKKLI 216

[Close]

BLAST of CmoCh11G015290 vs. TAIR 10
Match: AT3G10780.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 196.1 bits (497), Expect = 3.0e-50
Identity = 111/215 (51.63%), Postives = 140/215 (65.12%), Query Frame = 0


Query: 7   ILPSLLLILSFLA--ADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISENYTH 66
           I P L + L +LA    L     AIW  +P +G +CV EEI  NVVV+ DY+ I + +T 
Sbjct: 3   ISPVLFIGLIYLAGGGSLFPGVEAIWLTVPESGERCVYEEIQANVVVVLDYICIDDAFTQ 62

Query: 67  -APTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFWI---DGHHERGGDVSLS 126
             PT+ V+VTSPYG  LY   N T+GQ AFTT+E+G  LAC  +     HH     V +S
Sbjct: 63  LGPTLDVRVTSPYGKELYKIANVTHGQAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVS 122

Query: 127 LEWRTGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTN 186
           L+W+ GI AKDW+SVA+KEKIEGVELE+R+      AI  NILYL+ REA MR ++EKTN
Sbjct: 123 LDWKMGIRAKDWDSVAKKEKIEGVELEIRRSTEYASAIRANILYLRIREAYMREINEKTN 182

Query: 187 GRVAWFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
            RV    +MSLGV I+ S  Q+ YLKR+F KKKLI
Sbjct: 183 TRVNQLGLMSLGVAIVVSISQVLYLKRYFLKKKLI 217

[Close]

BLAST of CmoCh11G015290 vs. TAIR 10
Match: AT1G26690.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 161.8 bits (408), Expect = 6.2e-40
Identity = 84/211 (39.81%), Postives = 138/211 (65.40%), Query Frame = 0


Query: 10  SLLLILSFLAADLVRPTHAIWFNLPSTGTKCVSEEIHNNVVVLADYVVISENYTH----A 69
           +L  IL FLA    + + ++ F L S  TKC+SE+I +N + +  Y V++ N  H    +
Sbjct: 7   NLCTILLFLAIS-SQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQS 66

Query: 70  PTVSVKVTSPYGNNLYHKENQTNGQFAFTTAEAGNHLACFW-IDGHHERGGDVSLSLEWR 129
             +S++VTS YGN  +H E+  +GQFAFT  E+G+++AC+  +D  H+    +S+  +WR
Sbjct: 67  HKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVD--HKPEVTLSIDFDWR 126

Query: 130 TGITAKDWESVARKEKIEGVELELRKLEGVVEAIHENILYLKEREAEMRIVSEKTNGRVA 189
           TG+ +K W SVA+K ++E +E ++++L   V +IHE + YL+ERE EM+ ++  TN ++A
Sbjct: 127 TGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKMA 186

Query: 190 WFSIMSLGVCILASTLQLWYLKRFFQKKKLI 216
           W S +SL VC+  + +Q  +LK FF+KKK+I
Sbjct: 187 WLSFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214

The following BLAST results are available for this feature:

BLAST of CmoCh11G015290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IDL4	4.2e-73	63.85	Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana ...	[more]
Q9FVU0	1.8e-71	62.74	Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana ...	[more]
Q8RWM6	3.4e-67	63.77	Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana ...	[more]
F4J4Y0	4.2e-49	51.63	Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana ...	[more]
Q9LQY3	8.8e-39	39.81	Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana ...	[more]

BLAST of CmoCh11G015290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQ97	8.4e-117	100.00	transmembrane emp24 domain-containing protein p24delta4-like OS=Cucurbita moscha...	[more]
A0A6J1JR63	2.4e-116	99.53	transmembrane emp24 domain-containing protein p24delta4-like OS=Cucurbita maxima...	[more]
A0A6J1HR23	7.6e-102	86.05	transmembrane emp24 domain-containing protein p24delta3-like OS=Cucurbita maxima...	[more]
A0A6J1HGJ9	2.9e-101	86.05	transmembrane emp24 domain-containing protein p24delta3-like OS=Cucurbita moscha...	[more]
A0A6J1DNY9	8.4e-101	86.05	transmembrane emp24 domain-containing protein p24delta3-like OS=Momordica charan...	[more]

BLAST of CmoCh11G015290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09580.1	3.0e-74	63.85	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G57620.1	1.2e-72	62.74	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G21900.1	2.4e-68	63.77	emp24/gp25L/p24 family/GOLD family protein	[more]
AT3G10780.1	3.0e-50	51.63	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G26690.1	6.2e-40	39.81	emp24/gp25L/p24 family/GOLD family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 141..161
None	No IPR available	PANTHER	PTHR22811:SF127	EMP24/GP25L/P24 FAMILY PROTEIN	coord: 5..215
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 28..210 e-value: 3.9E-60 score: 215.8
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 28..210 e-value: 1.3E-49 score: 168.6
IPR009038	GOLD domain	PROSITE	PS50866	GOLD	coord: 38..150 score: 14.190387
IPR015720	Transmembrane emp24 domain-containing protein	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 5..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G015290.1	CmoCh11G015290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030134	COPII-coated ER to Golgi transport vesicle
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane