CmoCh11G015160 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGATTATCTTCCACAGGAAGTCTTATTTAACATCTTTCTGAAACTTCCTCCAAAAACCCTTGTCCTCTGTTCATGCGTCTCACAATCATGGCGCGCTGCCATCTCTGATCCAATTTTCATCAACGCCCACTTCAATAAGTCTTCAATCTACAACAAGAAATGGCTGATTCTCAGGCGGTATTTTGGCACAGGGAGCAAGAAGAAAGAGCGGTATTCGCTTCATTTCGACACGGAAACATTGGATCTATACGAGGAATTGAAATTTCCATTCATCAATTGGAATGGGGATTTTAAGTTAGTGGGTATTTGCAATGGATTGGTTTGCTTATCTGGTCTCGACATTCTCTTGTGGAATCCATCAATTCAAAGAGTCGTAGCTGTTCTTAGAACAAGCGATATTATCACCATCTATGATGCCCCAGATAAATTTGCACTCGGGTTTGGCTTCGATCCTCGGGCCAACGACTACAAGGTGGTAAGATTGTTATATTTTGAAGATAAGAGTCCTTTTAATTATAAAAGATCTCCTAAAGTTGAATTGTATGAGGTTAGAACAGGTTGTTGGAGAGTAATCGAAAGCAAAGCTCCTCGTTGTGAGATAGTTAAATCAGAATGGACACAAGCTTTTTTCAATGGGGCTGTTCATTGGGTTGCATACAGGGAAAGTAGCAGGGGTTATAAGTGTTTCATTTTGAGATTTGATATAGTTGAGGAGTGTTTCAGTTTAATAGCTTTGCCTGATTGTTTGGTTAATAGCTCACCATGTGACTTGAAAGTTTCTGTTCTAGGAGGAGCACTTTCTATCATGTTGTGTGGCTGGTACTGTTTTGAAACATATGTGTGCTCTGTTTGGGTGCTGCAAAACTATGACATGCCTGAGTCTTGGACTAAATTAACCAGCTTCGAACCGTCTCAGGAGTTGGGAATGGTGTTGGGTCTTAGGGAAAATGGAGATATGATAATGGAATCTAAAAGTGGAGAAGTGGTCGTGTATAGGCCTGAAAACCAGCTTATGAAGGGTCTTGGAATCTATGGTGGTGAGGGTTCTTTCTATTTAGATACTTATGTTGAGAGCTTGGCTTTGTTGAATGAAGGGAAAGGAGGCTTGGAGAGAGTGGCTGAAGTTTATGACTGAGTTCTTACTGTGCTGTTAGCTGATTGATAATAATGGTATGATTCATTTCTTAGTGAATATATGATATGGCCCTTTTAACATGTATATTATGTTTTTACTTGGTCAAGGCCGACTTTGGAGATATCGAGTGTTTTCGTTATAAGCTCATCCGAAGATTCGAACACATATCTTGATGTTTTATTAAATTAATAGGTTCAGTGTACAGTTTGAAATATATTGAATGGTTCTTCATTTTGGTCATTGTTTTTTATGACATGAAAATGAAATGAAAGGTCTCAATCTCTGAGGCAATGACAATGTTAGTGTGTAACCCTTTTGGGCTTCCCCCTCAAGGTTTTTAAAACGCATCTGTTAGAGAGAGGTTTCCACACCTTTATAAGGAATGTTTCGTTCTCGTCTCCAACTGATGTGAGATCTCACAATCCACCCCCCTTGGAGCTCTAGCGTCCTTGCTAGCACACCGCTCGGTGTCTAGCTCTGATACCATTTGTAATAGCCCAAGTTCACCGCTAGCAAATATTGTCCTTTTTGGGCTTTCCATTTCGGGCTTCCCTTCAAGATCTTCAAAACGCATCTACTAGGGAGAGGTTTCCACACTCTTGTAAGGAATGTTTTGTTCTTCTCCCCAACATATGTGGGATCTCACATAGTGACTTCATTGTTTTGACACGATGAAATCACTACCATTGTAAGGCTTAGCTTACACTGGATTAGTAATAGGAGGATATAGAAAGTAAAAGAATATATGAAGAAACACTTTGATCCTATATTTGGAAGCCGATGTTAGATGCTTCGTACGTTTTTTTCTCTCCTAAACTTCCTAGAGGTCAGGCTTAAGGCATATTACTGGTTTACAGCTTATTTCATAGTTAAGAGTCGCTTTGATGATGAAATTGCACTACTTCTGCATTTGTTTCTACTTTTAAGAACTTAGGAAACTTGTAATCAAATTATTATTTGAGTTACCATTTATCAATAGATTATTTGGTGAAGAAGTCGAGATCGAACAGAAAACAACACAATAAACCACCTTGGGTTACTGTGGTTGAGGAGGCAAGCTGGAAATGTAGACAGTTTGAGGTCCTGAATTTAAATCATTGTTGGTCACCCTACCTAGAATATTGAATAAACATCATAAGTTTTCTGAAGGAAAACGCTATAGGTTCGGTAGTCGTTACAACGGAATTAATCAAGGTGTTTATAAGCTTGTTTAAATTAAATGGTACACGTACAGCCTAGGGAAGCATGATGCCTTTTTCTTTTTTAAGTGAATTTTAGACTCTTTATTGTAGATTTCGGTGACTCGGAGAGATCGGATGATAATCCGATCGATCAAATAGAAAGTATGAGAAGACTGATACAAGTGGAGTTTTGTTATAGAAAGAAAAAGGGAAGAAGAAAAATAAGGAATTAGGATATGCTCTCTCCTTCATCTTGAACTATGACTATTAACAGTGCAACTTCTGACTTTCTTTGCTTCATAACGAGCTACGGGAGGTCGCTCGTGCTGGTTTTGTGACTTAAACAAAGAAATAAAAACCAGAATCTATCGTAGTTCGGTTACTTGAAGCCCTTGATTGTTTGAGAAAGCCATCCCAGGTTTGGAACTTTGTTTTCTTCTTTTAGCTGTGGATAATTACAGTTCAGTTGTTTTCTAAGTTTAATTAGGTTTGATTGTCTTAGGAAAGCTTGGACCAAGGGATATTTGGAAGTAATTCAAAGGAGAACGAGGTAAGTCCAAGTTCATAAATTGCCAATCTGTGTGTGCTTTTAAAGCATGTAATGACTGAGATTATTCTGAATTTATGAGTTTTTTGTTTGTCAAAGAATCTAGCAAGAAGAGTCCTTAAAGTCGATTCGTGGATTAGAGGTCGGTCGGTCGGTCGGTATGCAATCGTTTCTGTTATGCTCAATGAGCAACCTTGTTTTCATCTGAATTCTGCAAATCTATATCTGAGTTCATATCAAAACCTGAAGAAACTGAGGAGCAATTAAAATGAAGAAGTTAGTGAAAAAGAACAACTTTTGATGTTCATTTATTATTATTATTATTATTTGGTGATGCATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATGAGGGTGTGGAAATTGTCCTTAGCAGACAATATCTCCTAGTGGTGGACTTGGGCTATTACAAATGGTATCAGAGCCAGACACCGGGCGATGTGCCAGTGAGGAGGCTGAGCCCCGAAAGAGGTGGATACGAGGCGGTGTGCCAACCAAGATGTTGGACCCCGAAAAGGAGTGGATTAGGGGGTCCCACATCGATTGGAGAAGGGAACGAGTGCCAATGACGACGTTGGACCCCGAAGGGGGGAGGAGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGGGAACGAAATATTCTTTACAAGGGTGTGGAAACCTCCCCTTAGCAGACGCGTTTTAAAAACCTTGAGGGAAAACTCGATAGGAAAAGCCTAAAAAAGACAATATCTGCTAGCAGTGGGCTTGGATTGTTACAAACGGTATTTCAAACCATACCAGTTTCAAAGCAGGGACAGATTCCTA ATGGCCGATTATCTTCCACAGGAAGTCTTATTTAACATCTTTCTGAAACTTCCTCCAAAAACCCTTGTCCTCTGTTCATGCGTCTCACAATCATGGCGCGCTGCCATCTCTGATCCAATTTTCATCAACGCCCACTTCAATAAGTCTTCAATCTACAACAAGAAATGGCTGATTCTCAGGCGGTATTTTGGCACAGGGAGCAAGAAGAAAGAGCGGTATTCGCTTCATTTCGACACGGAAACATTGGATCTATACGAGGAATTGAAATTTCCATTCATCAATTGGAATGGGGATTTTAAGTTAGTGGGTATTTGCAATGGATTGGTTTGCTTATCTGGTCTCGACATTCTCTTGTGGAATCCATCAATTCAAAGAGTCGTAGCTGTTCTTAGAACAAGCGATATTATCACCATCTATGATGCCCCAGATAAATTTGCACTCGGGTTTGGCTTCGATCCTCGGGCCAACGACTACAAGGTGGTAAGATTGTTATATTTTGAAGATAAGAGTCCTTTTAATTATAAAAGATCTCCTAAAGTTGAATTGTATGAGGTTAGAACAGGTTGTTGGAGAGTAATCGAAAGCAAAGCTCCTCGTTGTGAGATAGTTAAATCAGAATGGACACAAGCTTTTTTCAATGGGGCTGTTCATTGGGTTGCATACAGGGAAAGTAGCAGGGGTTATAAGTGTTTCATTTTGAGATTTGATATAGTTGAGGAGTGTTTCAGTTTAATAGCTTTGCCTGATTGTTTGGTTAATAGCTCACCATGTGACTTGAAAGTTTCTGTTCTAGGAGGAGCACTTTCTATCATGTTGTGTGGCTGGTACTGTTTTGAAACATATGTGTGCTCTGTTTGGGTGCTGCAAAACTATGACATGCCTGAGTCTTGGACTAAATTAACCAGCTTCGAACCGTCTCAGGAGTTGGGAATGGTGTTGGGTCTTAGGGAAAATGGAGATATGATAATGGAATCTAAAAGTGGAGAAGTGGTCGTGTATAGGCCTGAAAACCAGCTTATGAAGGGTCTTGGAATCTATGGTGGTGAGGGTTCTTTCTATTTAGATACTTATGTTGAGAGCTTGGCTTTGTTGAATGAAGGGAAAGGAGGCTTGGAGAGAGTGGCTGAAGAAAGCTTGGACCAAGGGATATTTGGAAGTAATTCAAAGGAGAACGAGAATCTAGCAAGAAGAGTCCTTAAAGTCGATTCGTGGATTAGAGGTCGGTCGGTCGGTCGGTATGCAATCGTTTCTGTTATGCTCAATGAGCAACCTTGTTTTCATCTGAATTCTGCAAATCTATATCTGAGTTCATATCAAAACCTGAAGAAACTGAGGAGCAATTAAAATGAAGAAGTTAGTGAAAAAGAACAACTTTTGATGTTCATTTATTATTATTATTATTATTTGGTGATGCATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATGAGGGTGTGGAAATTGTCCTTAGCAGACAATATCTCCTAGTGGTGGACTTGGGCTATTACAAATGGTATCAGAGCCAGACACCGGGCGATGTGCCAGTGAGGAGGCTGAGCCCCGAAAGAGGTGGATACGAGGCGGTGTGCCAACCAAGATGTTGGACCCCGAAAAGGAGTGGATTAGGGGGTCCCACATCGATTGGAGAAGGGAACGAGTGCCAATGACGACGTTGGACCCCGAAGGGGGGAGGAGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGGGAACGAAATATTCTTTACAAGGGTGTGGAAACCTCCCCTTAGCAGACGCGTTTTAAAAACCTTGAGGGAAAACTCGATAGGAAAAGCCTAAAAAAGACAATATCTGCTAGCAGTGGGCTTGGATTGTTACAAACGGTATTTCAAACCATACCAGTTTCAAAGCAGGGACAGATTCCTA ATGGCCGATTATCTTCCACAGGAAGTCTTATTTAACATCTTTCTGAAACTTCCTCCAAAAACCCTTGTCCTCTGTTCATGCGTCTCACAATCATGGCGCGCTGCCATCTCTGATCCAATTTTCATCAACGCCCACTTCAATAAGTCTTCAATCTACAACAAGAAATGGCTGATTCTCAGGCGGTATTTTGGCACAGGGAGCAAGAAGAAAGAGCGGTATTCGCTTCATTTCGACACGGAAACATTGGATCTATACGAGGAATTGAAATTTCCATTCATCAATTGGAATGGGGATTTTAAGTTAGTGGGTATTTGCAATGGATTGGTTTGCTTATCTGGTCTCGACATTCTCTTGTGGAATCCATCAATTCAAAGAGTCGTAGCTGTTCTTAGAACAAGCGATATTATCACCATCTATGATGCCCCAGATAAATTTGCACTCGGGTTTGGCTTCGATCCTCGGGCCAACGACTACAAGGTGGTAAGATTGTTATATTTTGAAGATAAGAGTCCTTTTAATTATAAAAGATCTCCTAAAGTTGAATTGTATGAGGTTAGAACAGGTTGTTGGAGAGTAATCGAAAGCAAAGCTCCTCGTTGTGAGATAGTTAAATCAGAATGGACACAAGCTTTTTTCAATGGGGCTGTTCATTGGGTTGCATACAGGGAAAGTAGCAGGGGTTATAAGTGTTTCATTTTGAGATTTGATATAGTTGAGGAGTGTTTCAGTTTAATAGCTTTGCCTGATTGTTTGGTTAATAGCTCACCATGTGACTTGAAAGTTTCTGTTCTAGGAGGAGCACTTTCTATCATGTTGTGTGGCTGGTACTGTTTTGAAACATATGTGTGCTCTGTTTGGGTGCTGCAAAACTATGACATGCCTGAGTCTTGGACTAAATTAACCAGCTTCGAACCGTCTCAGGAGTTGGGAATGGTGTTGGGTCTTAGGGAAAATGGAGATATGATAATGGAATCTAAAAGTGGAGAAGTGGTCGTGTATAGGCCTGAAAACCAGCTTATGAAGGGTCTTGGAATCTATGGTGGTGAGGGTTCTTTCTATTTAGATACTTATGTTGAGAGCTTGGCTTTGTTGAATGAAGGGAAAGGAGGCTTGGAGAGAGTGGCTGAAGAAAGCTTGGACCAAGGGATATTTGGAAGTAATTCAAAGGAGAACGAGAATCTAGCAAGAAGAGTCCTTAAAGTCGATTCGTGGATTAGAGGTCGGTCGGTCGGTCGGTATGCAATCGTTTCTGTTATGCTCAATGAGCAACCTTGTTTTCATCTGAATTCTGCAAATCTATATCTGAGTTCATATCAAAACCTGAAGAAACTGAGGAGCAATTAA MADYLPQEVLFNIFLKLPPKTLVLCSCVSQSWRAAISDPIFINAHFNKSSIYNKKWLILRRYFGTGSKKKERYSLHFDTETLDLYEELKFPFINWNGDFKLVGICNGLVCLSGLDILLWNPSIQRVVAVLRTSDIITIYDAPDKFALGFGFDPRANDYKVVRLLYFEDKSPFNYKRSPKVELYEVRTGCWRVIESKAPRCEIVKSEWTQAFFNGAVHWVAYRESSRGYKCFILRFDIVEECFSLIALPDCLVNSSPCDLKVSVLGGALSIMLCGWYCFETYVCSVWVLQNYDMPESWTKLTSFEPSQELGMVLGLRENGDMIMESKSGEVVVYRPENQLMKGLGIYGGEGSFYLDTYVESLALLNEGKGGLERVAEESLDQGIFGSNSKENENLARRVLKVDSWIRGRSVGRYAIVSVMLNEQPCFHLNSANLYLSSYQNLKKLRSN Homology
BLAST of CmoCh11G015160 vs. ExPASy Swiss-Prot
Match: Q9SU30 (F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2) HSP 1 Score: 124.0 bits (310), Expect = 4.2e-27 Identity = 106/422 (25.12%), Postives = 208/422 (49.29%), Query Frame = 0
BLAST of CmoCh11G015160 vs. ExPASy Swiss-Prot
Match: Q9SFC7 (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 9.4e-19 Identity = 107/408 (26.23%), Postives = 179/408 (43.87%), Query Frame = 0
BLAST of CmoCh11G015160 vs. ExPASy Swiss-Prot
Match: Q9LIR8 (F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 2.1e-18 Identity = 95/341 (27.86%), Postives = 144/341 (42.23%), Query Frame = 0
BLAST of CmoCh11G015160 vs. ExPASy Swiss-Prot
Match: Q8GXC7 (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.0e-17 Identity = 104/400 (26.00%), Postives = 179/400 (44.75%), Query Frame = 0
BLAST of CmoCh11G015160 vs. ExPASy Swiss-Prot
Match: Q9SUY0 (F-box protein At4g22390 OS=Arabidopsis thaliana OX=3702 GN=At4g22390 PE=2 SV=3) HSP 1 Score: 84.7 bits (208), Expect = 2.8e-15 Identity = 93/424 (21.93%), Postives = 186/424 (43.87%), Query Frame = 0
BLAST of CmoCh11G015160 vs. ExPASy TrEMBL
Match: A0A6J1EPQ1 (F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111434513 PE=4 SV=1) HSP 1 Score: 784.3 bits (2024), Expect = 2.8e-223 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0
BLAST of CmoCh11G015160 vs. ExPASy TrEMBL
Match: A0A6J1JIB9 (F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111486051 PE=4 SV=1) HSP 1 Score: 760.0 bits (1961), Expect = 5.6e-216 Identity = 362/376 (96.28%), Postives = 370/376 (98.40%), Query Frame = 0
BLAST of CmoCh11G015160 vs. ExPASy TrEMBL
Match: A0A6J1DX53 (F-box protein CPR30-like OS=Momordica charantia OX=3673 GN=LOC111025356 PE=4 SV=1) HSP 1 Score: 609.4 bits (1570), Expect = 1.2e-170 Identity = 292/372 (78.49%), Postives = 329/372 (88.44%), Query Frame = 0
BLAST of CmoCh11G015160 vs. ExPASy TrEMBL
Match: A0A1S3BLB6 (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103491297 PE=4 SV=1) HSP 1 Score: 588.6 bits (1516), Expect = 2.2e-164 Identity = 278/376 (73.94%), Postives = 323/376 (85.90%), Query Frame = 0
BLAST of CmoCh11G015160 vs. ExPASy TrEMBL
Match: A0A5D3E389 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00210 PE=4 SV=1) HSP 1 Score: 588.6 bits (1516), Expect = 2.2e-164 Identity = 278/376 (73.94%), Postives = 323/376 (85.90%), Query Frame = 0
BLAST of CmoCh11G015160 vs. TAIR 10
Match: AT4G12560.1 (F-box and associated interaction domains-containing protein ) HSP 1 Score: 124.0 bits (310), Expect = 3.0e-28 Identity = 106/422 (25.12%), Postives = 208/422 (49.29%), Query Frame = 0
BLAST of CmoCh11G015160 vs. TAIR 10
Match: AT4G12560.2 (F-box and associated interaction domains-containing protein ) HSP 1 Score: 124.0 bits (310), Expect = 3.0e-28 Identity = 106/422 (25.12%), Postives = 208/422 (49.29%), Query Frame = 0
BLAST of CmoCh11G015160 vs. TAIR 10
Match: AT3G07870.1 (F-box and associated interaction domains-containing protein ) HSP 1 Score: 96.3 bits (238), Expect = 6.7e-20 Identity = 107/408 (26.23%), Postives = 179/408 (43.87%), Query Frame = 0
BLAST of CmoCh11G015160 vs. TAIR 10
Match: AT3G23880.1 (F-box and associated interaction domains-containing protein ) HSP 1 Score: 95.1 bits (235), Expect = 1.5e-19 Identity = 95/341 (27.86%), Postives = 144/341 (42.23%), Query Frame = 0
BLAST of CmoCh11G015160 vs. TAIR 10
Match: AT3G06240.1 (F-box family protein ) HSP 1 Score: 91.3 bits (225), Expect = 2.2e-18 Identity = 104/400 (26.00%), Postives = 179/400 (44.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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