CmoCh11G014770 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G014770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-type E3 ubiquitin transferase
Location	Cmo_Chr11: 10443138 .. 10444130 (-)
RNA-Seq Expression	CmoCh11G014770
Synteny	CmoCh11G014770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCCTCTCCCGAAAGCTCCTCTCCGACGACGACGACGACGACCTCAAGAAACTCTGCCTTAAAACCTGCCCCAATAACTCTCCCGATTCTTGCCCTTCCGATTGCCTCGAAAAATGCCCAAACCTTTGTTCCCGTGGCTCGATTTCAATCCCGCCGCCCTATTACGACAAATCGCCTCACAAACTCTCCAATTGGGTCACAGCCACCATCGCCTTTCTCTCTTTCACCTTTCTCCTCGTCATCTGTTACACCGTCTACGTCCGTTTCTACTCCGGCCGCCGCAGACGCCACCAACGCCCTGACCCCCCACCGCCCACCACCCACCAAGAGGAGTTTCTCGATGAAGAACATGGCCCTGTTTTGGATCACCCCATCTGGTATATCCGTACCATCGGCCTCCCGCCGGCTGTCATCAACGCCATCGCTATCTGCAAATTCAAAACCGGCGAGGGTTTGATCGACGGAACAGAGTGCTCTGTTTGTTTAAGCGAATTTGAAGAGGATGAGACTCTTAGACTTTTGCCTAAGTGTAGCCACGCTTTTCATCTCCCCTGTATCGACACTTGGCTTCAATCCCACACGAACTGCCCCATGTGCCGCGCTCCAGTGGTAGCTCAATCCACCGCCGTGACCCCACCGCCGCCGCCGCCTCCGCCTCCTCTGGTCACATCTGAAGAAACCCAGATGAGGGATTTACAGAGGGAAGTGGGAAATGGATCCAATTCCGGCGAATCTTCTCTAAGAAACGAAGAACAACAAGAACAACAAGAACAAGATGAAATTCAGGCAGTGAGAAGATCAGTTTCTTTAGATTCATTATCAGCTCTTCGAATAATCTCTGATCTTGCTGACATTGGTATGAGAAATGGGAATGATTTGAAGAAGAAATCATCCCAAGAGAGAGTGAATTCTTCAGCAGCTATGAACAGGTCAGTTTCTTGCAGTGGCGAATTTGTGATGAGAAATTCGACACAGAGTAGTAGTTGA

mRNA sequence

ATGGATTTCCTCTCCCGAAAGCTCCTCTCCGACGACGACGACGACGACCTCAAGAAACTCTGCCTTAAAACCTGCCCCAATAACTCTCCCGATTCTTGCCCTTCCGATTGCCTCGAAAAATGCCCAAACCTTTGTTCCCGTGGCTCGATTTCAATCCCGCCGCCCTATTACGACAAATCGCCTCACAAACTCTCCAATTGGGTCACAGCCACCATCGCCTTTCTCTCTTTCACCTTTCTCCTCGTCATCTGTTACACCGTCTACGTCCGTTTCTACTCCGGCCGCCGCAGACGCCACCAACGCCCTGACCCCCCACCGCCCACCACCCACCAAGAGGAGTTTCTCGATGAAGAACATGGCCCTGTTTTGGATCACCCCATCTGGTATATCCGTACCATCGGCCTCCCGCCGGCTGTCATCAACGCCATCGCTATCTGCAAATTCAAAACCGGCGAGGGTTTGATCGACGGAACAGAGTGCTCTGTTTGTTTAAGCGAATTTGAAGAGGATGAGACTCTTAGACTTTTGCCTAAGTGTAGCCACGCTTTTCATCTCCCCTGTATCGACACTTGGCTTCAATCCCACACGAACTGCCCCATGTGCCGCGCTCCAGTGGTAGCTCAATCCACCGCCGTGACCCCACCGCCGCCGCCGCCTCCGCCTCCTCTGGTCACATCTGAAGAAACCCAGATGAGGGATTTACAGAGGGAAGTGGGAAATGGATCCAATTCCGGCGAATCTTCTCTAAGAAACGAAGAACAACAAGAACAACAAGAACAAGATGAAATTCAGGCAGTGAGAAGATCAGTTTCTTTAGATTCATTATCAGCTCTTCGAATAATCTCTGATCTTGCTGACATTGGTATGAGAAATGGGAATGATTTGAAGAAGAAATCATCCCAAGAGAGAGTGAATTCTTCAGCAGCTATGAACAGGTCAGTTTCTTGCAGTGGCGAATTTGTGATGAGAAATTCGACACAGAGTAGTAGTTGA

Coding sequence (CDS)

ATGGATTTCCTCTCCCGAAAGCTCCTCTCCGACGACGACGACGACGACCTCAAGAAACTCTGCCTTAAAACCTGCCCCAATAACTCTCCCGATTCTTGCCCTTCCGATTGCCTCGAAAAATGCCCAAACCTTTGTTCCCGTGGCTCGATTTCAATCCCGCCGCCCTATTACGACAAATCGCCTCACAAACTCTCCAATTGGGTCACAGCCACCATCGCCTTTCTCTCTTTCACCTTTCTCCTCGTCATCTGTTACACCGTCTACGTCCGTTTCTACTCCGGCCGCCGCAGACGCCACCAACGCCCTGACCCCCCACCGCCCACCACCCACCAAGAGGAGTTTCTCGATGAAGAACATGGCCCTGTTTTGGATCACCCCATCTGGTATATCCGTACCATCGGCCTCCCGCCGGCTGTCATCAACGCCATCGCTATCTGCAAATTCAAAACCGGCGAGGGTTTGATCGACGGAACAGAGTGCTCTGTTTGTTTAAGCGAATTTGAAGAGGATGAGACTCTTAGACTTTTGCCTAAGTGTAGCCACGCTTTTCATCTCCCCTGTATCGACACTTGGCTTCAATCCCACACGAACTGCCCCATGTGCCGCGCTCCAGTGGTAGCTCAATCCACCGCCGTGACCCCACCGCCGCCGCCGCCTCCGCCTCCTCTGGTCACATCTGAAGAAACCCAGATGAGGGATTTACAGAGGGAAGTGGGAAATGGATCCAATTCCGGCGAATCTTCTCTAAGAAACGAAGAACAACAAGAACAACAAGAACAAGATGAAATTCAGGCAGTGAGAAGATCAGTTTCTTTAGATTCATTATCAGCTCTTCGAATAATCTCTGATCTTGCTGACATTGGTATGAGAAATGGGAATGATTTGAAGAAGAAATCATCCCAAGAGAGAGTGAATTCTTCAGCAGCTATGAACAGGTCAGTTTCTTGCAGTGGCGAATTTGTGATGAGAAATTCGACACAGAGTAGTAGTTGA

Protein sequence

MDFLSRKLLSDDDDDDLKKLCLKTCPNNSPDSCPSDCLEKCPNLCSRGSISIPPPYYDKSPHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTTHQEEFLDEEHGPVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLVTSEETQMRDLQREVGNGSNSGESSLRNEEQQEQQEQDEIQAVRRSVSLDSLSALRIISDLADIGMRNGNDLKKKSSQERVNSSAAMNRSVSCSGEFVMRNSTQSSS

Homology

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BLAST of CmoCh11G014770 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.7e-34
Identity = 80/166 (48.19%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 53  PPPYYDKSPHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTTHQE 112
           PPP     P +LS  +  +I  +  + +L +    ++  +  ++RR       P  T+Q+
Sbjct: 27  PPPPPPPPPRELSLLLPTSICVVG-SIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQ 86

Query: 113 EFLDE-EHGPVLD-HPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEED 172
           E  DE E     D H +W I T+GL  + IN+I +  FK GEG+IDGTECSVCL+EFEED
Sbjct: 87  EDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEED 146

Query: 173 ETLRLLPKCSHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPP 217
           E+LRLLPKCSHAFHL CIDTWL SH NCP+CRAPV+     +T PP
Sbjct: 147 ESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL----LITEPP 187

[Close]

BLAST of CmoCh11G014770 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 7.4e-29
Identity = 102/306 (33.33%), Postives = 152/306 (49.67%), Query Frame = 0


Query: 42  PNLCSRGSISIP--PPYYDKSPHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRR- 101
           P+ C   SIS    P     S     + +T T A L+   +L+  + +  +F+S    R 
Sbjct: 58  PSPCPSPSISAVYLPSQDSSSSLDAISIITITGAVLA---ILLTGFFLVAKFFSDSVNRV 117

Query: 102 ----HQRPDPPPPTTHQEEFLDEEHGPVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGL 161
               +Q  +    T  +EEF D E    +DHPIW IRT GL  ++IN+I IC +K G+GL
Sbjct: 118 NQGTYQSDNEDNDTVMEEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGL 177

Query: 162 IDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTP 221
           I+ T+C VCL+EFEEDE+LRLLPKC+HAFH+ CIDTWL SHTNCP+CRA +   S     
Sbjct: 178 IERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTT-- 237

Query: 222 PPPPPPPPLVTSEETQMRDLQREVGNGSNSGESSLRNEEQQEQQEQDEIQ-AVRRSVS-- 281
             P    P+  +       L+ +  +  + GE   R +   ++ +  +I+  + R  S  
Sbjct: 238 --PRYSGPVEVTPGGSGSHLENDGVDEEDHGEIENRVDSDFKESDDSDIRIEIYRFDSDG 297

Query: 282 ----LDSLSALRIISDLADIGMRNGNDLKKKSSQERVNSSAAMNRSVSC---SGEFVMRN 331
                ++   +R++ +  D    NG D     S  + +  +      SC   S EF   N
Sbjct: 298 DGSETETKERVRVLKECMD---PNGGDSVNSLSHTKTHVESVDFPGKSCENQSEEFTRHN 350

[Close]

BLAST of CmoCh11G014770 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-24
Identity = 115/355 (32.39%), Postives = 164/355 (46.20%), Query Frame = 0


Query: 22  LKTCPNN-SPDSCPSDCLE-----KCPNLCSRGSISIPPPYY-----DKSPHKLSNWVTA 81
           + T PN  SP    +DC +      CP  C       PP ++       S    S  + A
Sbjct: 1   MSTNPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIA 60

Query: 82  TIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTTHQEEFLDEEH-GPVLDHPIWY 141
            I  L+   +LV  YT+  ++     R HQ        T   E L+  H G         
Sbjct: 61  LIGILTSALILVSYYTLISKYC---HRHHQ--------TSSSETLNLNHNGEGFFSSTQR 120

Query: 142 IRT--IGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPC 201
           I T   GL  ++I +I + K+K+G+G +DG++CSVCLSEFEE+E+LRLLPKC+HAFHLPC
Sbjct: 121 ISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPC 180

Query: 202 IDTWLQSHTNCPMCRAPV---------VAQSTAVTPPPPPPPPPLVTS----------EE 261
           IDTWL+SH+NCP+CRA V         V Q+ +V             S           E
Sbjct: 181 IDTWLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYE 240

Query: 262 TQMRDLQR-------EVGNGSNSGESSLRNEEQQEQQEQDEIQAVRRSVSLDSLSALRII 321
           +Q  D          E+G+ ++   S L+  E++ + + ++   +RRSVSL+S   + I 
Sbjct: 241 SQTGDFDSVVVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIA 300

Query: 322 SDLADIGMRNGNDLKKKSSQER----------VNSSAAMNRSVSCSGEFVMRNST 327
             L +I    G      +SQ R          +  + A  RS   SG FV   ST
Sbjct: 301 DVLREIEDEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRSGGVSGFFVRSLST 344

[Close]

BLAST of CmoCh11G014770 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 2.7e-23
Identity = 73/196 (37.24%), Postives = 94/196 (47.96%), Query Frame = 0


Query: 37  CLEKCPNLCSRGSISIPPPYY--------DKSPHKLSNWVTATIAFLSFTFLLVICYTVY 96
           C   CP  C    I  PPP +        D S    S  V A I  L+  FLLV  YT +
Sbjct: 22  CSMYCPQWCY--FIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYT-F 81

Query: 97  VRFYSGR------RRRHQRPDPPPPTTHQEEFLDEEHGPVLDHPIWYIR-TIGLPPAVIN 156
           +  Y G       R                      HG    H  W +    GL   +IN
Sbjct: 82  ISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLDETLIN 141

Query: 157 AIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLQSHTNCPMC 216
            I +CK++ G+G +  T+CSVCL EF + E+LRLLP+CSHAFH  CIDTWL+SH+NCP+C
Sbjct: 142 KITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLC 201

Query: 217 RAPVVAQSTAVTPPPP 218
           RA +   +  +  P P
Sbjct: 202 RANITFVTVGLASPEP 214

[Close]

BLAST of CmoCh11G014770 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 9.7e-21
Identity = 87/278 (31.29%), Postives = 139/278 (50.00%), Query Frame = 0


Query: 37  CLEKCPNLCSRGSISIPPP--YY-----DKSPHKLSNWVTATIAFLSFTFLLVICYTVYV 96
           C   CP  C    +  PPP  +Y     D S    S  + A I  L+  F+LV  YT+  
Sbjct: 25  CSVYCPQWC---YVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLIS 84

Query: 97  RFYSGRRRRHQRPDPPPPT--------THQEEFLDEEHGPVLDHPIWYIRTI------GL 156
           ++    RRRH                 T Q    +  +G    +     +TI      GL
Sbjct: 85  KYC--HRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPN-----QTIGGGGGDGL 144

Query: 157 PPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLQSH 216
             ++I +I + K++  +G ++ ++CSVCLSEF+E+E+LRLLPKC+HAFH+PCIDTWL+SH
Sbjct: 145 DESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSH 204

Query: 217 TNCPMCRAPVVAQSTA----VTPPPPPPPPPLVTSEETQMRDLQREVGNGSNSGE----- 276
           +NCP+CRA +V  S      +T          +++ +  +  +  ++ N  +  E     
Sbjct: 205 SNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRSRNETVNEG 264

Query: 277 SSLRNEEQQEQQEQDEIQAVRRSVSLDSLSALRIISDL 285
           S+ +  E Q+ ++ +E    RRS SL+S   +  I+D+
Sbjct: 265 STPKPPEMQDSRDGEE----RRSASLNSGGGVVSIADI 288

[Close]

BLAST of CmoCh11G014770 vs. ExPASy TrEMBL
Match: A0A6J1EI25 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111434557 PE=3 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 2.9e-185
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MDFLSRKLLSDDDDDDLKKLCLKTCPNNSPDSCPSDCLEKCPNLCSRGSISIPPPYYDKS 60
           MDFLSRKLLSDDDDDDLKKLCLKTCPNNSPDSCPSDCLEKCPNLCSRGSISIPPPYYDKS
Sbjct: 1   MDFLSRKLLSDDDDDDLKKLCLKTCPNNSPDSCPSDCLEKCPNLCSRGSISIPPPYYDKS 60

Query: 61  PHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTTHQEEFLDEEHG 120
           PHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTTHQEEFLDEEHG
Sbjct: 61  PHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTTHQEEFLDEEHG 120

Query: 121 PVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKCS 180
           PVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKCS
Sbjct: 121 PVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKCS 180

Query: 181 HAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLVTSEETQMRDLQREVGN 240
           HAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLVTSEETQMRDLQREVGN
Sbjct: 181 HAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLVTSEETQMRDLQREVGN 240

Query: 241 GSNSGESSLRNEEQQEQQEQDEIQAVRRSVSLDSLSALRIISDLADIGMRNGNDLKKKSS 300
           GSNSGESSLRNEEQQEQQEQDEIQAVRRSVSLDSLSALRIISDLADIGMRNGNDLKKKSS
Sbjct: 241 GSNSGESSLRNEEQQEQQEQDEIQAVRRSVSLDSLSALRIISDLADIGMRNGNDLKKKSS 300

Query: 301 QERVNSSAAMNRSVSCSGEFVMRNSTQSSS 331
           QERVNSSAAMNRSVSCSGEFVMRNSTQSSS
Sbjct: 301 QERVNSSAAMNRSVSCSGEFVMRNSTQSSS 330

[Close]

BLAST of CmoCh11G014770 vs. ExPASy TrEMBL
Match: A0A6J1JNI4 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111486075 PE=3 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.3e-174
Identity = 315/331 (95.17%), Postives = 319/331 (96.37%), Query Frame = 0


Query: 1   MDFLSRKLL-SDDDDDDLKKLCLKTCPNNSPDSCPSDCLEKCPNLCSRGSISIPPPYYDK 60
           MDFLSRKLL  DDDDDD K+LCLKTCPNNSPD+CPSDCLEKCPNLCSRG ISIPPPYYDK
Sbjct: 1   MDFLSRKLLPDDDDDDDFKELCLKTCPNNSPDNCPSDCLEKCPNLCSRGPISIPPPYYDK 60

Query: 61  SPHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTTHQEEFLDEEH 120
           SPHKL NWVTATIA LSFTFLLV+CYTVYVRFYSGRRRR QRPDPPPPTTHQEEFLDEEH
Sbjct: 61  SPHKLPNWVTATIALLSFTFLLVLCYTVYVRFYSGRRRRRQRPDPPPPTTHQEEFLDEEH 120

Query: 121 GPVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKC 180
           GPVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKC
Sbjct: 121 GPVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKC 180

Query: 181 SHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLVTSEETQMRDLQREVG 240
           SHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLVTSEETQMRDLQ EVG
Sbjct: 181 SHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLVTSEETQMRDLQMEVG 240

Query: 241 NGSNSGESSLRNEEQQEQQEQDEIQAVRRSVSLDSLSALRIISDLADIGMRNGNDLKKKS 300
           NGSNSGESSLRNE   EQQEQDEIQAVRRSVSLDSLSALRIISDLA+IGMRNGNDLKKKS
Sbjct: 241 NGSNSGESSLRNE---EQQEQDEIQAVRRSVSLDSLSALRIISDLAEIGMRNGNDLKKKS 300

Query: 301 SQERVNSSAAMNRSVSCSGEFVMRNSTQSSS 331
            QERVNSSAAMNRSVSCSGEFVMRNSTQSSS
Sbjct: 301 CQERVNSSAAMNRSVSCSGEFVMRNSTQSSS 328

[Close]

BLAST of CmoCh11G014770 vs. ExPASy TrEMBL
Match: A0A5D3C4M8 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001880 PE=3 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 3.2e-115
Identity = 246/360 (68.33%), Postives = 276/360 (76.67%), Query Frame = 0


Query: 1   MDFL-SRKLL-SDDDDDDLKKLCLKTCPNNSPDSCPSDCLEKCPNLCSRGSISIPPPYYD 60
           MDFL SRKLL SDD+DDDLKKLC K C + S  SCPS CLEKC N C    I IPPP  D
Sbjct: 1   MDFLSSRKLLSSDDEDDDLKKLC-KDCFDYSSYSCPSYCLEKCKNYCYI-HIPIPPPDAD 60

Query: 61  --------KSPHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTT- 120
                   KSPHKLSN VT+TIA LSFTFLLV+CY +Y RFYSGRRRR + PDPPPP T 
Sbjct: 61  DINQTSSTKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYSGRRRRIRLPDPPPPETH 120

Query: 121 HQEEFLDEEHGPVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEE 180
           HQ EFLDEE GPVLDHPIWYIRTIGLPPAVI+AIA+CKFK+GEGLIDGTECSVCLSEFEE
Sbjct: 121 HQHEFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEE 180

Query: 181 DETLRLLPKCSHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLVTSEET 240
           DETLRLLPKCSHAFHLPCIDTWL+SHTNCPMCRAPVVAQS+A    PPPP PP     ET
Sbjct: 181 DETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSSAAAASPPPPRPP----AET 240

Query: 241 QMRDLQREVGNGSNSGESSLRNEEQQEQQEQDE---------------IQAVRRSVSLDS 300
           Q+ +LQRE G+G+N GESS RNEE+QEQQ ++E               IQ VRRSVSLDS
Sbjct: 241 QIGELQREEGDGANLGESSARNEEEQEQQHEEEETHFADEDLEERSSDIQPVRRSVSLDS 300

Query: 301 LSALRIISDLADIGMRNGNDLK------KKSSQER-VNSSAAMNRSVSCSGEFVMRNSTQ 328
           LSALRI S  A++  +  +D +      KKSSQ R  +S+++MNRSVSCSG+F+MR+STQ
Sbjct: 301 LSALRISSVFANVNEKLDSDAETIQRKGKKSSQGRGYSSTSSMNRSVSCSGKFLMRSSTQ 354

[Close]

BLAST of CmoCh11G014770 vs. ExPASy TrEMBL
Match: A0A1S3BZS6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103495376 PE=3 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 3.2e-115
Identity = 246/360 (68.33%), Postives = 276/360 (76.67%), Query Frame = 0


Query: 1   MDFL-SRKLL-SDDDDDDLKKLCLKTCPNNSPDSCPSDCLEKCPNLCSRGSISIPPPYYD 60
           MDFL SRKLL SDD+DDDLKKLC K C + S  SCPS CLEKC N C    I IPPP  D
Sbjct: 1   MDFLSSRKLLSSDDEDDDLKKLC-KDCFDYSSYSCPSYCLEKCKNYCYI-HIPIPPPDAD 60

Query: 61  --------KSPHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTT- 120
                   KSPHKLSN VT+TIA LSFTFLLV+CY +Y RFYSGRRRR + PDPPPP T 
Sbjct: 61  DINQTSSTKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYSGRRRRIRLPDPPPPETH 120

Query: 121 HQEEFLDEEHGPVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEE 180
           HQ EFLDEE GPVLDHPIWYIRTIGLPPAVI+AIA+CKFK+GEGLIDGTECSVCLSEFEE
Sbjct: 121 HQHEFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEE 180

Query: 181 DETLRLLPKCSHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLVTSEET 240
           DETLRLLPKCSHAFHLPCIDTWL+SHTNCPMCRAPVVAQS+A    PPPP PP     ET
Sbjct: 181 DETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSSAAAASPPPPRPP----AET 240

Query: 241 QMRDLQREVGNGSNSGESSLRNEEQQEQQEQDE---------------IQAVRRSVSLDS 300
           Q+ +LQRE G+G+N GESS RNEE+QEQQ ++E               IQ VRRSVSLDS
Sbjct: 241 QIGELQREEGDGANLGESSARNEEEQEQQHEEEETHFADEDLEERSSDIQPVRRSVSLDS 300

Query: 301 LSALRIISDLADIGMRNGNDLK------KKSSQER-VNSSAAMNRSVSCSGEFVMRNSTQ 328
           LSALRI S  A++  +  +D +      KKSSQ R  +S+++MNRSVSCSG+F+MR+STQ
Sbjct: 301 LSALRISSVFANVNEKLDSDAETIQRKGKKSSQGRGYSSTSSMNRSVSCSGKFLMRSSTQ 354

[Close]

BLAST of CmoCh11G014770 vs. ExPASy TrEMBL
Match: A0A0A0K2P1 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_7G066300 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 2.0e-109
Identity = 229/357 (64.15%), Postives = 265/357 (74.23%), Query Frame = 0


Query: 1   MDFLSRKLLSDDDDDDLKKLCLKTCPNNSPDSCPSDCLEKCPNLCSRGSISIPPPYYD-- 60
           MDF S + L  +DDDD K+ C K C +   DSC SDCLEKC + C   +I I PP  D  
Sbjct: 1   MDFFSSRKLLSEDDDDHKEFC-KDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHI 60

Query: 61  ------KSPHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTT-HQ 120
                 KSPHKLSN VT+TIA LSFTFLLV+CY +Y RFY+GRRRR + PDPPPP T HQ
Sbjct: 61  NPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQ 120

Query: 121 EEFLDEEHGPVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDE 180
            +FLDEE GPVLDHPIWYIRTIGLPPAVI+AIA+CKFK+GEGLIDGTECSVCLSEFEEDE
Sbjct: 121 HDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDE 180

Query: 181 TLRLLPKCSHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLVTSEETQM 240
           TLRLLPKCSHAFHLPCIDTWL+SHTNCPMCRAPVVAQS A    PP   PP     ETQ+
Sbjct: 181 TLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPP----AETQI 240

Query: 241 RDLQREVGNGSNSGESSLRNEEQQEQQEQDE--------------IQAVRRSVSLDSLSA 300
            +LQRE G+G+N GESS R EE+QE+QE+ E              IQ +RRSVSLDSLSA
Sbjct: 241 GELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSA 300

Query: 301 LRIISDLADIGMRNGNDLK------KKSSQERVNSS-AAMNRSVSCSGEFVMRNSTQ 328
           LRI SD A++  +  ++ +      KKSSQ R +SS ++MNRSVSCS +F+MR+STQ
Sbjct: 301 LRISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQ 352

[Close]

BLAST of CmoCh11G014770 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein )

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-43
Identity = 128/335 (38.21%), Postives = 181/335 (54.03%), Query Frame = 0


Query: 1   MDFLSRKLLSDDDDDDLK-KLCLKTCPN--NSPDSCPSDCLEKCPNLCSRGSIS-IPPP- 60
           M FL R LL D   +     LC   C     +   C S CL++CP++C    IS + PP 
Sbjct: 54  MRFLHRFLLEDMPKETFSDSLCKNNCIQELKTLGYCSSYCLDECPSICEIVVISGLSPPA 113

Query: 61  ---YYDKSPHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTTHQE 120
              + D     L    ++ I  L    LLV+C+    +FY  RRR          TT + 
Sbjct: 114 EIHHDDNLKRILIISASSIITTLFLLTLLVLCF----KFYYRRRR--------SITTSRR 173

Query: 121 EFLDEEH-----GP---VLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCL 180
             ++E       GP   ++DHPIW+IRTIGL P VI++I +C++   +G+++GT+CSVCL
Sbjct: 174 WSMEEARNWDFDGPAPVIVDHPIWHIRTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCL 233

Query: 181 SEFEEDETLRLLPKCSHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLV 240
           SEFEE+ETLRLLPKC HAFHL CIDTWL+SHTNCP+CRAP+V  +T +           V
Sbjct: 234 SEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIVEANTMIDDHSEGLEEISV 293

Query: 241 TSEETQMRDLQREVGNGSNSGESSLRNEEQQEQQEQDEIQAVRRSVSLDSLSALRIISDL 300
              E    D   E+    +   S++  +  + QQ     Q VRRSVSLDSLS LR+    
Sbjct: 294 MIPEENGDDTDEEIEEERDGFVSNISRDHGESQQ-----QRVRRSVSLDSLSGLRV---- 353

Query: 301 ADIGMRNGNDLKKKSSQERVNSSAAMNRSVSCSGE 320
           +++ +    +  K+ +      S+ + RS+S SG+
Sbjct: 354 SEVVVGREKEKLKRGNNIGSGRSSLLKRSISYSGK 367

[Close]

BLAST of CmoCh11G014770 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 146.0 bits (367), Expect = 5.4e-35
Identity = 80/166 (48.19%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 53  PPPYYDKSPHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTTHQE 112
           PPP     P +LS  +  +I  +  + +L +    ++  +  ++RR       P  T+Q+
Sbjct: 27  PPPPPPPPPRELSLLLPTSICVVG-SIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQ 86

Query: 113 EFLDE-EHGPVLD-HPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEED 172
           E  DE E     D H +W I T+GL  + IN+I +  FK GEG+IDGTECSVCL+EFEED
Sbjct: 87  EDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEED 146

Query: 173 ETLRLLPKCSHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPP 217
           E+LRLLPKCSHAFHL CIDTWL SH NCP+CRAPV+     +T PP
Sbjct: 147 ESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL----LITEPP 187

[Close]

BLAST of CmoCh11G014770 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 5.3e-30
Identity = 102/306 (33.33%), Postives = 152/306 (49.67%), Query Frame = 0


Query: 42  PNLCSRGSISIP--PPYYDKSPHKLSNWVTATIAFLSFTFLLVICYTVYVRFYSGRRRR- 101
           P+ C   SIS    P     S     + +T T A L+   +L+  + +  +F+S    R 
Sbjct: 58  PSPCPSPSISAVYLPSQDSSSSLDAISIITITGAVLA---ILLTGFFLVAKFFSDSVNRV 117

Query: 102 ----HQRPDPPPPTTHQEEFLDEEHGPVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGL 161
               +Q  +    T  +EEF D E    +DHPIW IRT GL  ++IN+I IC +K G+GL
Sbjct: 118 NQGTYQSDNEDNDTVMEEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGL 177

Query: 162 IDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTP 221
           I+ T+C VCL+EFEEDE+LRLLPKC+HAFH+ CIDTWL SHTNCP+CRA +   S     
Sbjct: 178 IERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTT-- 237

Query: 222 PPPPPPPPLVTSEETQMRDLQREVGNGSNSGESSLRNEEQQEQQEQDEIQ-AVRRSVS-- 281
             P    P+  +       L+ +  +  + GE   R +   ++ +  +I+  + R  S  
Sbjct: 238 --PRYSGPVEVTPGGSGSHLENDGVDEEDHGEIENRVDSDFKESDDSDIRIEIYRFDSDG 297

Query: 282 ----LDSLSALRIISDLADIGMRNGNDLKKKSSQERVNSSAAMNRSVSC---SGEFVMRN 331
                ++   +R++ +  D    NG D     S  + +  +      SC   S EF   N
Sbjct: 298 DGSETETKERVRVLKECMD---PNGGDSVNSLSHTKTHVESVDFPGKSCENQSEEFTRHN 350

[Close]

BLAST of CmoCh11G014770 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 7.9e-26
Identity = 115/355 (32.39%), Postives = 164/355 (46.20%), Query Frame = 0


Query: 22  LKTCPNN-SPDSCPSDCLE-----KCPNLCSRGSISIPPPYY-----DKSPHKLSNWVTA 81
           + T PN  SP    +DC +      CP  C       PP ++       S    S  + A
Sbjct: 1   MSTNPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIA 60

Query: 82  TIAFLSFTFLLVICYTVYVRFYSGRRRRHQRPDPPPPTTHQEEFLDEEH-GPVLDHPIWY 141
            I  L+   +LV  YT+  ++     R HQ        T   E L+  H G         
Sbjct: 61  LIGILTSALILVSYYTLISKYC---HRHHQ--------TSSSETLNLNHNGEGFFSSTQR 120

Query: 142 IRT--IGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPC 201
           I T   GL  ++I +I + K+K+G+G +DG++CSVCLSEFEE+E+LRLLPKC+HAFHLPC
Sbjct: 121 ISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPC 180

Query: 202 IDTWLQSHTNCPMCRAPV---------VAQSTAVTPPPPPPPPPLVTS----------EE 261
           IDTWL+SH+NCP+CRA V         V Q+ +V             S           E
Sbjct: 181 IDTWLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYE 240

Query: 262 TQMRDLQR-------EVGNGSNSGESSLRNEEQQEQQEQDEIQAVRRSVSLDSLSALRII 321
           +Q  D          E+G+ ++   S L+  E++ + + ++   +RRSVSL+S   + I 
Sbjct: 241 SQTGDFDSVVVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIA 300

Query: 322 SDLADIGMRNGNDLKKKSSQER----------VNSSAAMNRSVSCSGEFVMRNST 327
             L +I    G      +SQ R          +  + A  RS   SG FV   ST
Sbjct: 301 DVLREIEDEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRSGGVSGFFVRSLST 344

[Close]

BLAST of CmoCh11G014770 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 6.9e-22
Identity = 87/278 (31.29%), Postives = 139/278 (50.00%), Query Frame = 0


Query: 37  CLEKCPNLCSRGSISIPPP--YY-----DKSPHKLSNWVTATIAFLSFTFLLVICYTVYV 96
           C   CP  C    +  PPP  +Y     D S    S  + A I  L+  F+LV  YT+  
Sbjct: 25  CSVYCPQWC---YVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLIS 84

Query: 97  RFYSGRRRRHQRPDPPPPT--------THQEEFLDEEHGPVLDHPIWYIRTI------GL 156
           ++    RRRH                 T Q    +  +G    +     +TI      GL
Sbjct: 85  KYC--HRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPN-----QTIGGGGGDGL 144

Query: 157 PPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLQSH 216
             ++I +I + K++  +G ++ ++CSVCLSEF+E+E+LRLLPKC+HAFH+PCIDTWL+SH
Sbjct: 145 DESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSH 204

Query: 217 TNCPMCRAPVVAQSTA----VTPPPPPPPPPLVTSEETQMRDLQREVGNGSNSGE----- 276
           +NCP+CRA +V  S      +T          +++ +  +  +  ++ N  +  E     
Sbjct: 205 SNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRSRNETVNEG 264

Query: 277 SSLRNEEQQEQQEQDEIQAVRRSVSLDSLSALRIISDL 285
           S+ +  E Q+ ++ +E    RRS SL+S   +  I+D+
Sbjct: 265 STPKPPEMQDSRDGEE----RRSASLNSGGGVVSIADI 288

The following BLAST results are available for this feature:

BLAST of CmoCh11G014770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX93	7.7e-34	48.19	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
Q8LFY8	7.4e-29	33.33	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]
Q9LF64	1.1e-24	32.39	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q7XLY8	2.7e-23	37.24	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9SRQ8	9.7e-21	31.29	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of CmoCh11G014770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EI25	2.9e-185	100.00	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111434557...	[more]
A0A6J1JNI4	2.3e-174	95.17	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111486075 P...	[more]
A0A5D3C4M8	3.2e-115	68.33	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BZS6	3.2e-115	68.33	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103495376 PE=3 ...	[more]
A0A0A0K2P1	2.0e-109	64.15	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_7G066300 PE...	[more]

BLAST of CmoCh11G014770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33565.1	1.1e-43	38.21	RING/U-box superfamily protein	[more]
AT5G10380.1	5.4e-35	48.19	RING/U-box superfamily protein	[more]
AT1G72220.1	5.3e-30	33.33	RING/U-box superfamily protein	[more]
AT5G17600.1	7.9e-26	32.39	RING/U-box superfamily protein	[more]
AT3G03550.1	6.9e-22	31.29	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 249..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..251
None	No IPR available	PANTHER	PTHR45676:SF126	RING-H2 FINGER PROTEIN ATL54	coord: 22..321
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 159..202 e-value: 1.14314E-15 score: 68.1055
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 154..208
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 160..201 e-value: 1.7E-7 score: 40.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 159..202 e-value: 3.7E-13 score: 49.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 160..202 score: 12.872856
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 137..211 e-value: 2.0E-21 score: 77.0
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 22..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G014770.1	CmoCh11G014770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane