CmoCh11G012970 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCAAAACCCTTCAATCTTCGCTTTTCTTCCCCCCCCTTAATTCTCCCTCTCCAATTTCTCTTTCTAGGGTTTCTCCCCCGTTTTCTTCTTCTCTCCGGGATCGCAAGCTTCCTCAACTTGCTTCAATCCTCCTCCACATTCAACCTCCACCCATGGATGCTGATCCCTGGACTTCTCGCCTTTCTTCTGCTTCAAAGCGCTACCAATCTTCTCTTCTATCACGATCTGGTTTACTTCCCGCTCCTTCATTTCCATTTCTCATTTTCACTGCCTTTCCACTCATTTCCAACTCACTGCCTTTCTAATTGCTGTTCTGTTCATTACCTTTTTTTTTTTTTTTTTTTCTTCATACACTGTTGTGTTTTTTGTTACCTTGATTTTATTTGATTTTCCTTGAAAATGTTGCTATCTGTGGATATGTGGAAGAACTGATGACAATAAATCGAAACAACTGTGACTATTGTAATTCTGCTTTTGTTTGATATTGTTTATTCCAGTGTGGTGAAGATGATGGAATAATGTTCGATTGTGCTTTGTTTTATGAATTTCGATTGTGCTTTCTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTGTNACCATGGATTTTCGGTAGGATGCTTATGTGTGCTTGCGTAGACGAGAAATTGAGAATATAGTAGATGCATTAGTCCAAGAAGTACTTCGTAGTGTCTGTATTGTGTACCTTGAAAAATAAGCCATAGTATGTGAAAAATAAAAAGAATCACCTTATGAACTAATAAGTAAGCATGCTAATCTAGATTCTTGGGGATTCTTGGGGATTCTTGGGCTGACTTCTGAAAATGGCGATTAAGAAGATTACAACATGTGACATTTAATATTTTGTTATTTAAGACAAAGTGCATCTAACTTTCTGCTGTCACTCATGATATTGCCTTCTGCTTCAATTTGTTTTATATCATCATTTATACGGGTCAATGCTTTTATGAGTCCCTCTACTCTTTTTTTATTTTATTTTATTTTTATTGTCTGTAACCTTTTGCCTTCACCTTCAGTTTTAGACTTATTCTATAGTACCTCAATATGCAGGTATGTTCATGGGGTTTGAAGAACTTGAAGGGGATGATGATATAAGAGAAGAGTTTCCCTGCCCGTTTTGCGCAGAATATTTTGATATAGTTGGATTGTGCTGTCACATTGATGAAGAACATCCTATCGAGGCAAAGACTGGGGTATGAATCCCTGCAAAACAATTTATTTGAATTGCGTATTTCCGTTCGAAAAGTAGTTAATTTTGATTGAGCTTTTGATTTATGATCATTGTCTGGCTTAAATACATATCTAATAATGTTCTTGAAAAAAACAATAAAAAATCCTGATATCTGTCTTTTTCACTTAGTTTTAACTTAGAAGACGGCCCCTATATATAGATATATATATATATATATATATATATATATTTTCATATAGTCTCATTTTCTGTAGTGTATGGTGATGACTTTGTCTATCTGGAAATGTTTAGAGCCCTCCGAGGAGAAGTAAAGAAAAATATTTACCTAATAAAAGCCTTAATTTCCCCTACTACCATCGAGATATGAAGATTTGGGGTGTACAAATTGAGGAACTGTACATGTAAATCGGTATTCGTGGCACCATTACAGGAAACACAATTTGTCTAAAAATCTCATCAAAGTTTTATTGACTGAGAAAATAGGGAATTGTTTGAGGAGAGTCAAGTTTTTTCTTTTTTTTGTCTTCCATGGATTGCAGCTTTGGGATGTGTTATCACATGTGATGGAAGTCATAAGAAAACCCCCTTTGTTCTACAAATTAGCATTTTCAATTTAAACAAACTACAGAAGATGTAGATCACCTACTCATGCATTGTCTATTTATTCCCTTGCTGGCGGCTCCTCTTCAAGTATTTGGAATCTCTCGAGGAATAAAGCAAGAGTATTACAGGGGAATGCACCTTAGGCTATTCTTTGGAAGTTGGTTGGGAAATTTTCTAGGGGATTGAGAAAGAATGGGACAAAGTGTATCTTGTAGCTTCCACTTGAGAGTTATATATCAAGCATATTCCGACTACTCTACTTGTACTTTTGTAATCTCCAGAGCTGATGATAAATGGGAAGAGCTCTTGTCCTACCTCCTCACACTTATATTATTGCAAGCTCTGTTTTTTAACAAAATAAATGAAGCCTCAAATTCAATGTATCTCAGGTTGAATCATTGCAAGATACTATTCATTCATCTCAATATCATTTTTTTCTTTTGGATAGCTAAGAGTGTCGTTCTCATCATACAGTGCCAACCAGTTGTTGCTGCACAATTTTCTAATTCTTGTGGATTCTTATTCTTTAAATTTGCTAATGTCCCTTTTTACAAAATAAATTCTAATTTTGTTTTTTACATTTGATATAGAAAACATATGTATTAACAGAATCTATGTCAATATCTAGGATATTTCTTGGCTCAATCACATAAATATATTTTTTCAACTCGGGATGCTAGTAATCACAAGCGCAATAAAAGGAGATATTTAATTTTGATATCAGTGATGTCACTTCTCCTTGTTCATTACACCATTTTAGTCCATTATGAATTCCTTTGTGTTCAAAGTGCAGTGCATAATGGCTATTCATAGTTTAAAAAAGGATAGCTTCATTAATGCGAAACATTATTATTAATCTGCAGGTTTGTCCAGTCTGTGATACGAGGGTGGGAGTTGACATGGTTGCGCATATAACCCTTCAGCATGCAAATATTTTCAAGATATCCTTTTATTTATCATGTTAAAATTAGTTTCTATCATTTCTGTTTTCCACTTATCTTATTTGCCTCGTTGAGAATGCTTCACATTCACGATTTTGTTGTATCTGTATTCTATAAAAATCAGCTCAGTGTCCGCCTAGCAGTATTCTCAATGATCTCTTTTGCATCTATCAGATCTCTCTCATGTTCCTGGGAGGAGTAAGGAATGTGACCCTTTCTTCTATTATGCTCCCATTTGCCTCTAAGCTACTGGAACCTTTTACCAGAATAGAATATCTATAAGACCTTGATATAAATTGGCATCGAAAATTATTCATCGACTTTTTCTCAGAAGGGAGGGAAAAGGAAAGTTAAGGTTTTGTCCGTTTCTATTCTTTTACTTTTCTTATTGGATCACATCATTTGAATTTTTACCTGCTACTGTTTTCTGCTCGAACTCTATATGAAATTTAAACTGGAAGATTAATCCCATGCTTAGTTCCTTAACCAGTGGTTACATGCAGCGTAAGAGGAAATCTCGTAAAGGTGGTTCACACTCAACTCTCTCTTTGTTGAGGAAAGAGCTTCAAGAAGGAAATTTGCAATCTCTTTTTGGGGGTTCTTCGTATTTAGTTACCTCCAATTCAGTGCCTGATCCACTGCTCTCATCGTTTATTCTACCTTTGGCTGATGACTATGGCAATGTTCAACCTCGCTTGTCGGCTGAATCAAGCTCTGCGAAGAGTAATTCACAAGTCAAACTATCAGAACGGTAAGTTCTATATAGTCCTACTATTATAGTTCCTTAGTTCACAAGGACATGGCCAAAGATAATTTCATTTTTGTTGGGAAGTTCCGTTGGGTGGAGTTACAAAGTTCTAGGAATGACTCTAAAGAAAGTGTAGGCTGCATCGCGAATAGATGTTTTCTCTTTGGCTATCTTGTCTTTTGAGTTCAGTTGATATTATTGTCGTCAAGGATGTTTTAACTAGGATAGAATATGAGGGTCTGAGTATGTATGTTGAAATGAACGCATGCTGCGAGCTAGTGCAAGGTCCAGTTTTGGTAGAAGATACGGGGAAACAAAATATTAAGTACATGTACCAAAATCTTGGCAATCATTATAGATACTTTTCCCTTAATGTCTATATTATCACATTGATTTTGAATTCCTGGATCTAAAATCTTGGTTTCATGTGACAGAAGCATCCCGTCGTCGCCTCTGTCCATGCAGGACAAGGAAGAGAAAGCGAAACGAAGCGGGTTTGTGCAAGGGCTGTTAATGTCGACCATCCTTGGTGATAATTTATGAAGAGACAGTTGTGTTGTTGCACAAATCAAAGTTGGCTGCTGCAATAGGCCCTCCTTGGTTTGCAAGCTCTCAAATTACTAGTATTATGCTTCAATGAGTGTCAAAATAAGGTGTAGTGTAATTTATTTTGCTTGTAAAACACCAATTCTTAGGCCTGACAACACTTTTATTTTCTGTTTAAATTTATGTTCATGGAAGAAAAAAAAAAAG CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCAAAACCCTTCAATCTTCGCTTTTCTTCCCCCCCCTTAATTCTCCCTCTCCAATTTCTCTTTCTAGGGTTTCTCCCCCGTTTTCTTCTTCTCTCCGGGATCGCAAGCTTCCTCAACTTGCTTCAATCCTCCTCCACATTCAACCTCCACCCATGGATGCTGATCCCTGGACTTCTCGCCTTTCTTCTGCTTCAAAGCGCTACCAATCTTCTCTTCTATCACGATCTGGTATGTTCATGGGGTTTGAAGAACTTGAAGGGGATGATGATATAAGAGAAGAGTTTCCCTGCCCGTTTTGCGCAGAATATTTTGATATAGTTGGATTGTGCTGTCACATTGATGAAGAACATCCTATCGAGGCAAAGACTGGGGTTTGTCCAGTCTGTGATACGAGGGTGGGAGTTGACATGATTAATCCCATGCTTAGTTCCTTAACCAGTGGTTACATGCAGCGTAAGAGGAAATCTCGTAAAGGTGGTTCACACTCAACTCTCTCTTTGTTGAGGAAAGAGCTTCAAGAAGGAAATTTGCAATCTCTTTTTGGGGGTTCTTCGTATTTAGTTACCTCCAATTCAGTGCCTGATCCACTGCTCTCATCGTTTATTCTACCTTTGGCTGATGACTATGGCAATGTTCAACCTCGCTTGTCGGCTGAATCAAGCTCTGCGAAGAGTAATTCACAAGTCAAACTATCAGAACGAAGCATCCCGTCGTCGCCTCTGTCCATGCAGGACAAGGAAGAGAAAGCGAAACGAAGCGGGTTTGTGCAAGGGCTGTTAATGTCGACCATCCTTGGTGATAATTTATGAAGAGACAGTTGTGTTGTTGCACAAATCAAAGTTGGCTGCTGCAATAGGCCCTCCTTGGTTTGCAAGCTCTCAAATTACTAGTATTATGCTTCAATGAGTGTCAAAATAAGGTGTAGTGTAATTTATTTTGCTTGTAAAACACCAATTCTTAGGCCTGACAACACTTTTATTTTCTGTTTAAATTTATGTTCATGGAAGAAAAAAAAAAAG ATGGATGCTGATCCCTGGACTTCTCGCCTTTCTTCTGCTTCAAAGCGCTACCAATCTTCTCTTCTATCACGATCTGGTATGTTCATGGGGTTTGAAGAACTTGAAGGGGATGATGATATAAGAGAAGAGTTTCCCTGCCCGTTTTGCGCAGAATATTTTGATATAGTTGGATTGTGCTGTCACATTGATGAAGAACATCCTATCGAGGCAAAGACTGGGGTTTGTCCAGTCTGTGATACGAGGGTGGGAGTTGACATGATTAATCCCATGCTTAGTTCCTTAACCAGTGGTTACATGCAGCGTAAGAGGAAATCTCGTAAAGGTGGTTCACACTCAACTCTCTCTTTGTTGAGGAAAGAGCTTCAAGAAGGAAATTTGCAATCTCTTTTTGGGGGTTCTTCGTATTTAGTTACCTCCAATTCAGTGCCTGATCCACTGCTCTCATCGTTTATTCTACCTTTGGCTGATGACTATGGCAATGTTCAACCTCGCTTGTCGGCTGAATCAAGCTCTGCGAAGAGTAATTCACAAGTCAAACTATCAGAACGAAGCATCCCGTCGTCGCCTCTGTCCATGCAGGACAAGGAAGAGAAAGCGAAACGAAGCGGGTTTGTGCAAGGGCTGTTAATGTCGACCATCCTTGGTGATAATTTATGA MDADPWTSRLSSASKRYQSSLLSRSGMFMGFEELEGDDDIREEFPCPFCAEYFDIVGLCCHIDEEHPIEAKTGVCPVCDTRVGVDMINPMLSSLTSGYMQRKRKSRKGGSHSTLSLLRKELQEGNLQSLFGGSSYLVTSNSVPDPLLSSFILPLADDYGNVQPRLSAESSSAKSNSQVKLSERSIPSSPLSMQDKEEKAKRSGFVQGLLMSTILGDNL Homology
BLAST of CmoCh11G012970 vs. ExPASy Swiss-Prot
Match: Q84J70 (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=DI19-3 PE=1 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.8e-60 Identity = 121/223 (54.26%), Postives = 161/223 (72.20%), Query Frame = 0
BLAST of CmoCh11G012970 vs. ExPASy Swiss-Prot
Match: Q6NM26 (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=DI19-6 PE=1 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59 Identity = 120/222 (54.05%), Postives = 156/222 (70.27%), Query Frame = 0
BLAST of CmoCh11G012970 vs. ExPASy Swiss-Prot
Match: Q39083 (Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana OX=3702 GN=DI19-1 PE=1 SV=2) HSP 1 Score: 188.3 bits (477), Expect = 8.9e-47 Identity = 105/210 (50.00%), Postives = 146/210 (69.52%), Query Frame = 0
BLAST of CmoCh11G012970 vs. ExPASy Swiss-Prot
Match: Q8VXU6 (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=DI19-4 PE=1 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.4e-44 Identity = 106/216 (49.07%), Postives = 147/216 (68.06%), Query Frame = 0
BLAST of CmoCh11G012970 vs. ExPASy Swiss-Prot
Match: Q9FJ17 (Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=DI19-7 PE=1 SV=2) HSP 1 Score: 166.8 bits (421), Expect = 2.8e-40 Identity = 100/228 (43.86%), Postives = 146/228 (64.04%), Query Frame = 0
BLAST of CmoCh11G012970 vs. ExPASy TrEMBL
Match: A0A6J1EU42 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437764 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 5.5e-108 Identity = 207/219 (94.52%), Postives = 209/219 (95.43%), Query Frame = 0
BLAST of CmoCh11G012970 vs. ExPASy TrEMBL
Match: A0A6J1JFX2 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486516 PE=3 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.3e-106 Identity = 204/219 (93.15%), Postives = 206/219 (94.06%), Query Frame = 0
BLAST of CmoCh11G012970 vs. ExPASy TrEMBL
Match: A0A6J1EZ54 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437764 PE=3 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 3.0e-106 Identity = 206/219 (94.06%), Postives = 208/219 (94.98%), Query Frame = 0
BLAST of CmoCh11G012970 vs. ExPASy TrEMBL
Match: A0A6J1JQC5 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486516 PE=3 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104 Identity = 203/219 (92.69%), Postives = 205/219 (93.61%), Query Frame = 0
BLAST of CmoCh11G012970 vs. ExPASy TrEMBL
Match: A0A6J1C705 (protein DEHYDRATION-INDUCED 19 homolog 3-like OS=Momordica charantia OX=3673 GN=LOC111007955 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92 Identity = 186/224 (83.04%), Postives = 198/224 (88.39%), Query Frame = 0
BLAST of CmoCh11G012970 vs. NCBI nr
Match: KAG7022399.1 (Protein DEHYDRATION-INDUCED 19-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 429.9 bits (1104), Expect = 1.3e-116 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh11G012970 vs. NCBI nr
Match: XP_022931597.1 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X1 [Cucurbita moschata] >KAG6588603.1 Protein DEHYDRATION-INDUCED 19-like 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 400.2 bits (1027), Expect = 1.1e-107 Identity = 207/219 (94.52%), Postives = 209/219 (95.43%), Query Frame = 0
BLAST of CmoCh11G012970 vs. NCBI nr
Match: XP_022989467.1 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 394.8 bits (1013), Expect = 4.8e-106 Identity = 204/219 (93.15%), Postives = 206/219 (94.06%), Query Frame = 0
BLAST of CmoCh11G012970 vs. NCBI nr
Match: XP_022931598.1 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 394.4 bits (1012), Expect = 6.2e-106 Identity = 206/219 (94.06%), Postives = 208/219 (94.98%), Query Frame = 0
BLAST of CmoCh11G012970 vs. NCBI nr
Match: XP_023530131.1 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 392.5 bits (1007), Expect = 2.4e-105 Identity = 204/220 (92.73%), Postives = 208/220 (94.55%), Query Frame = 0
BLAST of CmoCh11G012970 vs. TAIR 10
Match: AT3G05700.1 (Drought-responsive family protein ) HSP 1 Score: 233.8 bits (595), Expect = 1.3e-61 Identity = 121/223 (54.26%), Postives = 161/223 (72.20%), Query Frame = 0
BLAST of CmoCh11G012970 vs. TAIR 10
Match: AT5G26990.1 (Drought-responsive family protein ) HSP 1 Score: 231.1 bits (588), Expect = 8.5e-61 Identity = 120/222 (54.05%), Postives = 156/222 (70.27%), Query Frame = 0
BLAST of CmoCh11G012970 vs. TAIR 10
Match: AT1G56280.1 (drought-induced 19 ) HSP 1 Score: 185.7 bits (470), Expect = 4.1e-47 Identity = 104/209 (49.76%), Postives = 143/209 (68.42%), Query Frame = 0
BLAST of CmoCh11G012970 vs. TAIR 10
Match: AT1G56280.2 (drought-induced 19 ) HSP 1 Score: 181.0 bits (458), Expect = 1.0e-45 Identity = 104/209 (49.76%), Postives = 143/209 (68.42%), Query Frame = 0
BLAST of CmoCh11G012970 vs. TAIR 10
Match: AT3G06760.1 (Drought-responsive family protein ) HSP 1 Score: 181.0 bits (458), Expect = 1.0e-45 Identity = 106/216 (49.07%), Postives = 147/216 (68.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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