CmoCh11G012830 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G012830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	Cmo_Chr11: 8518072 .. 8520040 (+)
RNA-Seq Expression	CmoCh11G012830
Synteny	CmoCh11G012830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGCCAACAAACTGGCATCCTCCACTCGTTTCCACCCAATCCCATTGATAGTAAGAAACTCTCTCCAATGGATTAACAACTCCACCACTTTACAATCAACCCCACCTTTCACACCAAAATCGCCATCCATTTGGGCTACAAATCTCATCAAATCATACTTCGACAAAGGCCTATCCAAACACGCTCGTAACCTGTTCGATGAAATGCCTGAAAGAGATGTGGTTGCCTGGACTGCTATGATTGTTGGCTTTACTTCTTGCAATGACTATACTCAATCATGGGCTGTGTTCTGTGAGATGCTTAGGAGTGATATTCACCCAAATGCCTTCACTCTGTCTAGTGTTCTCAAGGCTTGCAAGGGCATGAAGGCTCTTTCATGTGGAACTTTGGCTCATAGTTTGGCCACGAAGCATGGTATTGACGGGTCAATGTATGTCCAGAATGCACTCTTGGATATGTATGCTACTTGCTGTGCTACCATGGATGATGCTTTGACTGTGTTTAATGATATACCTCTCAAGACTGCTGTGTCTTGGACTACCTTGATTGCAGGGTTCACTCACAGAGGTGATGGCTACAGCGGCCTTCAAGTTTTCAGGCAAATGTTACTGGTAACTATAGCCTTAACCATTTTTTACTTCTTCCACCACTCTATTTCATCGTTCATATCTATTTTACAAGATAGTTAATGACAAGAACTTATTAAATACAAAATTGAAAGATTAGAGGCCTATCAGATTTGCAATATTGAATTTTTTTGACGAACAGGATAATGTTGAACCAAACTCGTTTAGCTTTTCCATCGCGGTTAGAGCTTGTGCTTCAATCGGCTCGTATGCATATGGAAAACAAATACATGCAGCAGTCACCAAATATGGCCTCCATTCTGATATTCCAGTATTGAATTCAATACTCGACATGTATTGCAGGTGTAACTGTTTATGTGATGCAAAGAGATGTTTTGGTGAAATGACTGAAAGGAATTTGATTACATGGAACACCTTGATAGCAGGGTATGAAAGATCAGATTCCAGCGAGTCTTTAAGTTTATTTTCGCAAATGGGGTCTGAAGGCTATGAACCAAATTGTTTTACATTCACAAGTATTACAGCAGCTTGTGCCAATTTAGCAGTCTTAGGGTGTGGACAACAGGTTCATGGTGGAATCATTCGTAGAGGATTTGACAATAGTGTAGCTTTGGTGAATGCACTTATCGACATGTATGCGAAATGCGGGAACATAAATGATTCACACAAACTCTTCTGTGATATGCCTCGAAGAGACTTAGTGTCCTGGACTACCATGATGATTGGCTATGGATCACACGGATATGGAAAAGAGGTCATTAAGTTGTTCGATGAAATGGTTCGAAGTGGAATTCAACCTGATCGGATCGTGTTCATGGCGGTCCTAAGTGCTTGCAGCCATGCTGGACTTGTGAACAAGGGTCTAAGTTATTTCAGATCAATGGTGGAGGATTACAATCTTAACCCTGACCACGAGATCTATGGATGTGTAGTGGACTTGCTTGGGCGTGCTGGGAGAGTCGAGGAAGCTTTTCAACTAGTCGAGAGTATGCCATTTGAACCCGACGAGTCGGTTTGGGGTGCCCTGTTGGGAGCATGTAAAGCATATGAGCTTTCAAATCTAGGAAAGTTGGCAGCTCAGAGAGTATTGGATACAAGGCCGAATATGGCAGGGACTTACCTGCTGTTGTCCAATATATATGCAGCTGAAGGCAAATGGGGTGAGTTTGCGAAAATGAGGAAGCTGATGAAAGGGATGGACAACAAGAAAGAAGTGGGAAAGAGTTGGATTGAAATTAGAAATGAAGTTTATAGTTTTGTGGTTGGAGATAAGATGGGGCCTCACATAGAGTGCGTGCATAAAGTTCTTAAACTACTTGTTTGGCATATGAAGGATGATGGGGATGTCACAGATTTAGATTCACAACATGAATCATAG

mRNA sequence

ATGAGCGCCAACAAACTGGCATCCTCCACTCGTTTCCACCCAATCCCATTGATAGTAAGAAACTCTCTCCAATGGATTAACAACTCCACCACTTTACAATCAACCCCACCTTTCACACCAAAATCGCCATCCATTTGGGCTACAAATCTCATCAAATCATACTTCGACAAAGGCCTATCCAAACACGCTCGTAACCTGTTCGATGAAATGCCTGAAAGAGATGTGGTTGCCTGGACTGCTATGATTGTTGGCTTTACTTCTTGCAATGACTATACTCAATCATGGGCTGTGTTCTGTGAGATGCTTAGGAGTGATATTCACCCAAATGCCTTCACTCTGTCTAGTGTTCTCAAGGCTTGCAAGGGCATGAAGGCTCTTTCATGTGGAACTTTGGCTCATAGTTTGGCCACGAAGCATGGTATTGACGGGTCAATGTATGTCCAGAATGCACTCTTGGATATGTATGCTACTTGCTGTGCTACCATGGATGATGCTTTGACTGTGTTTAATGATATACCTCTCAAGACTGCTGTGTCTTGGACTACCTTGATTGCAGGGTTCACTCACAGAGGTGATGGCTACAGCGGCCTTCAAGTTTTCAGGCAAATAGCTTGTGCTTCAATCGGCTCGTATGCATATGGAAAACAAATACATGCAGCAGTCACCAAATATGGCCTCCATTCTGATATTCCAGTATTGAATTCAATACTCGACATGTATTGCAGGTGTAACTGTTTATGTGATGCAAAGAGATGTTTTGGTGAAATGACTGAAAGGAATTTGATTACATGGAACACCTTGATAGCAGGGTATGAAAGATCAGATTCCAGCGAGTCTTTAAGTTTATTTTCGCAAATGGGGTCTGAAGGCTATGAACCAAATTGTTTTACATTCACAAGTATTACAGCAGCTTGTGCCAATTTAGCAGTCTTAGGGTGTGGACAACAGGTTCATGGTGGAATCATTCGTAGAGGATTTGACAATAGTGTAGCTTTGGTGAATGCACTTATCGACATGTATGCGAAATGCGGGAACATAAATGATTCACACAAACTCTTCTGTGATATGCCTCGAAGAGACTTAGTGTCCTGGACTACCATGATGATTGGCTATGGATCACACGGATATGGAAAAGAGGTCATTAAGTTGTTCGATGAAATGGTTCGAAGTGGAATTCAACCTGATCGGATCGTGTTCATGGCGGTCCTAAGTGCTTGCAGCCATGCTGGACTTGTGAACAAGGGTCTAAGTTATTTCAGATCAATGGTGGAGGATTACAATCTTAACCCTGACCACGAGATCTATGGATGTGTAGTGGACTTGCTTGGGCGTGCTGGGAGAGTCGAGGAAGCTTTTCAACTAGTCGAGAGTATGCCATTTGAACCCGACGAGTCGGTTTGGGGTGCCCTGTTGGGAGCATGTAAAGCATATGAGCTTTCAAATCTAGGAAAGTTGGCAGCTCAGAGAGTATTGGATACAAGGCCGAATATGGCAGGGACTTACCTGCTGTTGTCCAATATATATGCAGCTGAAGGCAAATGGGGTGAGTTTGCGAAAATGAGGAAGCTGATGAAAGGGATGGACAACAAGAAAGAAGTGGGAAAGAGTTGGATTGAAATTAGAAATGAAGTTTATAGTTTTGTGGTTGGAGATAAGATGGGGCCTCACATAGAGTGCGTGCATAAAGTTCTTAAACTACTTGTTTGGCATATGAAGGATGATGGGGATGTCACAGATTTAGATTCACAACATGAATCATAG

Coding sequence (CDS)

ATGAGCGCCAACAAACTGGCATCCTCCACTCGTTTCCACCCAATCCCATTGATAGTAAGAAACTCTCTCCAATGGATTAACAACTCCACCACTTTACAATCAACCCCACCTTTCACACCAAAATCGCCATCCATTTGGGCTACAAATCTCATCAAATCATACTTCGACAAAGGCCTATCCAAACACGCTCGTAACCTGTTCGATGAAATGCCTGAAAGAGATGTGGTTGCCTGGACTGCTATGATTGTTGGCTTTACTTCTTGCAATGACTATACTCAATCATGGGCTGTGTTCTGTGAGATGCTTAGGAGTGATATTCACCCAAATGCCTTCACTCTGTCTAGTGTTCTCAAGGCTTGCAAGGGCATGAAGGCTCTTTCATGTGGAACTTTGGCTCATAGTTTGGCCACGAAGCATGGTATTGACGGGTCAATGTATGTCCAGAATGCACTCTTGGATATGTATGCTACTTGCTGTGCTACCATGGATGATGCTTTGACTGTGTTTAATGATATACCTCTCAAGACTGCTGTGTCTTGGACTACCTTGATTGCAGGGTTCACTCACAGAGGTGATGGCTACAGCGGCCTTCAAGTTTTCAGGCAAATAGCTTGTGCTTCAATCGGCTCGTATGCATATGGAAAACAAATACATGCAGCAGTCACCAAATATGGCCTCCATTCTGATATTCCAGTATTGAATTCAATACTCGACATGTATTGCAGGTGTAACTGTTTATGTGATGCAAAGAGATGTTTTGGTGAAATGACTGAAAGGAATTTGATTACATGGAACACCTTGATAGCAGGGTATGAAAGATCAGATTCCAGCGAGTCTTTAAGTTTATTTTCGCAAATGGGGTCTGAAGGCTATGAACCAAATTGTTTTACATTCACAAGTATTACAGCAGCTTGTGCCAATTTAGCAGTCTTAGGGTGTGGACAACAGGTTCATGGTGGAATCATTCGTAGAGGATTTGACAATAGTGTAGCTTTGGTGAATGCACTTATCGACATGTATGCGAAATGCGGGAACATAAATGATTCACACAAACTCTTCTGTGATATGCCTCGAAGAGACTTAGTGTCCTGGACTACCATGATGATTGGCTATGGATCACACGGATATGGAAAAGAGGTCATTAAGTTGTTCGATGAAATGGTTCGAAGTGGAATTCAACCTGATCGGATCGTGTTCATGGCGGTCCTAAGTGCTTGCAGCCATGCTGGACTTGTGAACAAGGGTCTAAGTTATTTCAGATCAATGGTGGAGGATTACAATCTTAACCCTGACCACGAGATCTATGGATGTGTAGTGGACTTGCTTGGGCGTGCTGGGAGAGTCGAGGAAGCTTTTCAACTAGTCGAGAGTATGCCATTTGAACCCGACGAGTCGGTTTGGGGTGCCCTGTTGGGAGCATGTAAAGCATATGAGCTTTCAAATCTAGGAAAGTTGGCAGCTCAGAGAGTATTGGATACAAGGCCGAATATGGCAGGGACTTACCTGCTGTTGTCCAATATATATGCAGCTGAAGGCAAATGGGGTGAGTTTGCGAAAATGAGGAAGCTGATGAAAGGGATGGACAACAAGAAAGAAGTGGGAAAGAGTTGGATTGAAATTAGAAATGAAGTTTATAGTTTTGTGGTTGGAGATAAGATGGGGCCTCACATAGAGTGCGTGCATAAAGTTCTTAAACTACTTGTTTGGCATATGAAGGATGATGGGGATGTCACAGATTTAGATTCACAACATGAATCATAG

Protein sequence

MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLSKHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKACKGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLQVFRQIACASIGSYAYGKQIHAAVTKYGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLFSQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKCGNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVLSACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPDESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQHES

Homology

[Close]

BLAST of CmoCh11G012830 vs. ExPASy Swiss-Prot
Match: Q9FXA9 (Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E64 PE=3 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 6.4e-201
Identity = 344/602 (57.14%), Postives = 441/602 (73.26%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWIN-NSTTLQSTPPFTPKSPSIWATNLIKSYFDKGL 60
           MS  KLA S  F PIP  VR+SL+     S+     PP+ PK   I ATNLI SYF+KGL
Sbjct: 1   MSITKLARSNAFKPIPNFVRSSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGL 60

Query: 61  SKHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKA 120
            + AR+LFDEMP+RDVVAWTAMI G+ S N   ++W  F EM++    PN FTLSSVLK+
Sbjct: 61  VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKS 120

Query: 121 CKGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVS 180
           C+ MK L+ G L H +  K G++GS+YV NA+++MYATC  TM+ A  +F DI +K  V+
Sbjct: 121 CRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVT 180

Query: 181 WTTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVT 240
           WTTLI GFTH GDG  GL++++Q+                 A ASI S   GKQIHA+V 
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVI 240

Query: 241 KYGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSL 300
           K G  S++PV+NSILD+YCRC  L +AK  F EM +++LITWNTLI+  ERSDSSE+L +
Sbjct: 241 KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLM 300

Query: 301 FSQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAK 360
           F +  S+G+ PNC+TFTS+ AACAN+A L CGQQ+HG I RRGF+ +V L NALIDMYAK
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK 360

Query: 361 CGNINDSHKLFCD-MPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMA 420
           CGNI DS ++F + + RR+LVSWT+MMIGYGSHGYG E ++LFD+MV SGI+PDRIVFMA
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420

Query: 421 VLSACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFE 480
           VLSAC HAGLV KGL YF  M  +Y +NPD +IY CVVDLLGRAG++ EA++LVE MPF+
Sbjct: 421 VLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFK 480

Query: 481 PDESVWGALLGACKAYELSNL-GKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKM 540
           PDES WGA+LGACKA++ + L  +LAA++V++ +P M GTY++LS IYAAEGKW +FA++
Sbjct: 481 PDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARV 540

Query: 541 RKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDL 583
           RK+M+ M NKKE G SWI + N+V+SF V DKM P+   V+ VL LL+   ++ G V +L
Sbjct: 541 RKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPEL 600

[Close]

BLAST of CmoCh11G012830 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 6.4e-108
Identity = 208/581 (35.80%), Postives = 319/581 (54.91%), Query Frame = 0


Query: 58  GLSKHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVL 117
           G    A +LF  MPERD   W +M+ GF   +   ++   F  M +     N ++ +SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159

Query: 118 KACKGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTA 177
            AC G+  ++ G   HSL  K      +Y+ +AL+DMY+  C  ++DA  VF+++  +  
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK-CGNVNDAQRVFDEMGDRNV 219

Query: 178 VSWTTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAA 237
           VSW +LI  F   G     L VF+ +                 ACAS+ +   G+++H  
Sbjct: 220 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 279

Query: 238 VTKYG-LHSDIPVLNSILDMYCRCNCLCD------------------------------- 297
           V K   L +DI + N+ +DMY +C+ + +                               
Sbjct: 280 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 339

Query: 298 AKRCFGEMTERNLITWNTLIAGY-ERSDSSESLSLFSQMGSEGYEPNCFTFTSITAACAN 357
           A+  F +M ERN+++WN LIAGY +  ++ E+LSLF  +  E   P  ++F +I  ACA+
Sbjct: 340 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 399

Query: 358 LAVLGCGQQVHGGIIRRGF------DNSVALVNALIDMYAKCGNINDSHKLFCDMPRRDL 417
           LA L  G Q H  +++ GF      ++ + + N+LIDMY KCG + + + +F  M  RD 
Sbjct: 400 LAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 459

Query: 418 VSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVLSACSHAGLVNKGLSYFRS 477
           VSW  M+IG+  +GYG E ++LF EM+ SG +PD I  + VLSAC HAG V +G  YF S
Sbjct: 460 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 519

Query: 478 MVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPDESVWGALLGACKAYELSN 537
           M  D+ + P  + Y C+VDLLGRAG +EEA  ++E MP +PD  +WG+LL ACK +    
Sbjct: 520 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT 579

Query: 538 LGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIR 583
           LGK  A+++L+  P+ +G Y+LLSN+YA  GKW +   +RK M+     K+ G SWI+I+
Sbjct: 580 LGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 639

[Close]

BLAST of CmoCh11G012830 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 375.6 bits (963), Expect = 1.1e-102
Identity = 200/546 (36.63%), Postives = 301/546 (55.13%), Query Frame = 0


Query: 63  ARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKACKG 122
           A + F E    +VV W  M+V +   +D   S+ +F +M   +I PN +T  S+LK C  
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502

Query: 123 MKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSWTT 182
           +  L  G   HS   K     + YV + L+DMYA     +D A  +      K  VSWTT
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK-LGKLDTAWDILIRFAGKDVVSWTT 562

Query: 183 LIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTKYG 242
           +IAG+T        L  FRQ+                 ACA + +   G+QIHA     G
Sbjct: 563 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 622

Query: 243 LHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERS-DSSESLSLFS 302
             SD+P  N+++ +Y RC  + ++   F +    + I WN L++G+++S ++ E+L +F 
Sbjct: 623 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 682

Query: 303 QMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKCG 362
           +M  EG + N FTF S   A +  A +  G+QVH  I + G+D+   + NALI MYAKCG
Sbjct: 683 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 742

Query: 363 NINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVLS 422
           +I+D+ K F ++  ++ VSW  ++  Y  HG+G E +  FD+M+ S ++P+ +  + VLS
Sbjct: 743 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 802

Query: 423 ACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPDE 482
           ACSH GLV+KG++YF SM  +Y L+P  E Y CVVD+L RAG +  A + ++ MP +PD 
Sbjct: 803 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 862

Query: 483 SVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLM 542
            VW  LL AC  ++   +G+ AA  +L+  P  + TY+LLSN+YA   KW      R+ M
Sbjct: 863 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 922

Query: 543 KGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDS-- 586
           K    KKE G+SWIE++N ++SF VGD+  P  + +H+  + L     + G V D  S  
Sbjct: 923 KEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLL 982

[Close]

BLAST of CmoCh11G012830 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.1e-102
Identity = 194/546 (35.53%), Postives = 312/546 (57.14%), Query Frame = 0


Query: 49  NLIKSYFDKGLSKHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHP 108
           +L+  Y        AR +FDEM ERDV++W ++I G+ S     +  +VF +ML S I  
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294

Query: 109 NAFTLSSVLKACKGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTV 168
           +  T+ SV   C   + +S G   HS+  K          N LLDMY+  C  +D A  V
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK-CGDLDSAKAV 354

Query: 169 FNDIPLKTAVSWTTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSY 228
           F ++  ++ VS+T++IAG+   G     +++F ++                  CA     
Sbjct: 355 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 414

Query: 229 AYGKQIHAAVTKYGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGY 288
             GK++H  + +  L  DI V N+++DMY +C  + +A+  F EM  +++I+WNT+I GY
Sbjct: 415 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 474

Query: 289 ERS-DSSESLSLFSQMGSE-GYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNS 348
            ++  ++E+LSLF+ +  E  + P+  T   +  ACA+L+    G+++HG I+R G+ + 
Sbjct: 475 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 534

Query: 349 VALVNALIDMYAKCGNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVR 408
             + N+L+DMYAKCG +  +H LF D+  +DLVSWT M+ GYG HG+GKE I LF++M +
Sbjct: 535 RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 594

Query: 409 SGIQPDRIVFMAVLSACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVE 468
           +GI+ D I F+++L ACSH+GLV++G  +F  M  +  + P  E Y C+VD+L R G + 
Sbjct: 595 AGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLI 654

Query: 469 EAFQLVESMPFEPDESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYA 528
           +A++ +E+MP  PD ++WGALL  C+ +    L +  A++V +  P   G Y+L++NIYA
Sbjct: 655 KAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYA 714

Query: 529 AEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVW 576
              KW +  ++RK +     +K  G SWIEI+  V  FV GD   P  E +   L+ +  
Sbjct: 715 EAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRA 774

[Close]

BLAST of CmoCh11G012830 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.1e-102
Identity = 188/555 (33.87%), Postives = 313/555 (56.40%), Query Frame = 0


Query: 48  TNLIKSYFDKGLSKHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIH 107
           T LI +    G    AR +FD++P   +  W A+I G++  N +  +  ++  M  + + 
Sbjct: 57  TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116

Query: 108 PNAFTLSSVLKACKGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALT 167
           P++FT   +LKAC G+  L  G   H+   + G D  ++VQN L+ +YA  C  +  A T
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK-CRRLGSART 176

Query: 168 VFNDIPL--KTAVSWTTLIAGFTHRGDGYSGLQVFRQI-----------------ACASI 227
           VF  +PL  +T VSWT +++ +   G+    L++F Q+                 A   +
Sbjct: 177 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 236

Query: 228 GSYAYGKQIHAAVTKYGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLI 287
                G+ IHA+V K GL  +  +L S+  MY +C  +  AK  F +M   NLI WN +I
Sbjct: 237 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 296

Query: 288 AGYERSD-SSESLSLFSQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFD 347
           +GY ++  + E++ +F +M ++   P+  + TS  +ACA +  L   + ++  + R  + 
Sbjct: 297 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 356

Query: 348 NSVALVNALIDMYAKCGNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEM 407
           + V + +ALIDM+AKCG++  +  +F     RD+V W+ M++GYG HG  +E I L+  M
Sbjct: 357 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 416

Query: 408 VRSGIQPDRIVFMAVLSACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGR 467
            R G+ P+ + F+ +L AC+H+G+V +G  +F  M  D+ +NP  + Y CV+DLLGRAG 
Sbjct: 417 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGH 476

Query: 468 VEEAFQLVESMPFEPDESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNI 527
           +++A+++++ MP +P  +VWGALL ACK +    LG+ AAQ++    P+  G Y+ LSN+
Sbjct: 477 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 536

Query: 528 YAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLL 583
           YAA   W   A++R  MK     K+VG SW+E+R  + +F VGDK  P  E + + ++ +
Sbjct: 537 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 596

[Close]

BLAST of CmoCh11G012830 vs. ExPASy TrEMBL
Match: A0A6J1EZ33 (putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucurbita moschata OX=3662 GN=LOC111437751 PE=4 SV=1)

HSP 1 Score: 1203.3 bits (3112), Expect = 0.0e+00
Identity = 585/603 (97.01%), Postives = 586/603 (97.18%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60
           MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS
Sbjct: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60

Query: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120
           KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC
Sbjct: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120

Query: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180
           KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW
Sbjct: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180

Query: 181 TTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTK 240
           TTLIAGFTHRGDGYSGLQVFRQ+                 ACASIGSYAYGKQIHAAVTK
Sbjct: 181 TTLIAGFTHRGDGYSGLQVFRQMLLDNVEPNSFSFSIAVRACASIGSYAYGKQIHAAVTK 240

Query: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300
           YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF
Sbjct: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300

Query: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360
           SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC
Sbjct: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360

Query: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420
           GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL
Sbjct: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420

Query: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480
           SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD
Sbjct: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480

Query: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540
           ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL
Sbjct: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540

Query: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ 587
           MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ
Sbjct: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ 600

[Close]

BLAST of CmoCh11G012830 vs. ExPASy TrEMBL
Match: A0A6J1JJV4 (putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucurbita maxima OX=3661 GN=LOC111486440 PE=4 SV=1)

HSP 1 Score: 1190.6 bits (3079), Expect = 0.0e+00
Identity = 577/603 (95.69%), Postives = 583/603 (96.68%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60
           MSANKLASSTRFHPIPLI+RNSLQWINNSTTLQSTPPFTPK PSIWATNLIKSYFD+GLS
Sbjct: 1   MSANKLASSTRFHPIPLIIRNSLQWINNSTTLQSTPPFTPKPPSIWATNLIKSYFDRGLS 60

Query: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120
           KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC
Sbjct: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120

Query: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180
           KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW
Sbjct: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180

Query: 181 TTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTK 240
           TTLIAGFTHRGDGYSGLQVFRQ+                 ACASIGSYAYGKQIHAAVTK
Sbjct: 181 TTLIAGFTHRGDGYSGLQVFRQMLLDNVEPNSFSFSIAVRACASIGSYAYGKQIHAAVTK 240

Query: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300
           YGLHSDIPVLNSILDMYCRCN LCDAKRCFGEMT RNLITWNTLIAGYERSDSSESLSLF
Sbjct: 241 YGLHSDIPVLNSILDMYCRCNYLCDAKRCFGEMTRRNLITWNTLIAGYERSDSSESLSLF 300

Query: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360
           SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC
Sbjct: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360

Query: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420
           GNINDSHKLFCDMP+RDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL
Sbjct: 361 GNINDSHKLFCDMPQRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420

Query: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480
           SACSHAGLVNKGLSYFRSM+EDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD
Sbjct: 421 SACSHAGLVNKGLSYFRSMLEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480

Query: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540
           ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL
Sbjct: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540

Query: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ 587
           MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLL+WHMKDDGDVTDLDSQ
Sbjct: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLIWHMKDDGDVTDLDSQ 600

[Close]

BLAST of CmoCh11G012830 vs. ExPASy TrEMBL
Match: A0A6J1DTG1 (putative pentatricopeptide repeat-containing protein At1g56570 OS=Momordica charantia OX=3673 GN=LOC111023836 PE=4 SV=1)

HSP 1 Score: 1059.7 bits (2739), Expect = 4.5e-306
Identity = 514/597 (86.10%), Postives = 541/597 (90.62%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60
           MSANKLASST FHPIPL+VRNSLQ +N+STT+Q  PPF PK PSIWATNLIKSYFDKGL+
Sbjct: 58  MSANKLASSTHFHPIPLLVRNSLQGVNSSTTIQPHPPFKPKGPSIWATNLIKSYFDKGLT 117

Query: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120
           K ARNLFDEMPERDVVAWT +IVGFTSCN Y Q+WAVFCEM+RS+I PNAFT+SSVLKA 
Sbjct: 118 KEARNLFDEMPERDVVAWTTLIVGFTSCNHYAQAWAVFCEMMRSEIEPNAFTMSSVLKAS 177

Query: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180
           KGM+ALSCG LAH LATK GID SMYV NALLDMYAT CATMDDALTVFNDIPLKTAVSW
Sbjct: 178 KGMEALSCGALAHGLATKLGIDRSMYVGNALLDMYAT-CATMDDALTVFNDIPLKTAVSW 237

Query: 181 TTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTK 240
           TTLIA FTHRGDGYSGLQVFRQ+                 ACASIGS +YGKQIHAAVTK
Sbjct: 238 TTLIAAFTHRGDGYSGLQVFRQMLLEDVEPNSFSFSIAVRACASIGSSSYGKQIHAAVTK 297

Query: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300
           YGLHSD+PV+NSILDMYCRCNCLCDAKRCFGEMT +NLITWNTLIAGYERSDSSESL LF
Sbjct: 298 YGLHSDVPVMNSILDMYCRCNCLCDAKRCFGEMTVKNLITWNTLIAGYERSDSSESLRLF 357

Query: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360
           S MG EGYEPNCFTFTS+TAACANLAVL CGQQVHGGI+RRGFD SVAL+NALIDMYAKC
Sbjct: 358 SHMGCEGYEPNCFTFTSVTAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKC 417

Query: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420
           GN+NDSHKLF DM +RDLVSWTTMMIGYG+HGYGKE IKLFDEMVRS I+PDRIVFMAVL
Sbjct: 418 GNVNDSHKLFSDMTQRDLVSWTTMMIGYGAHGYGKEAIKLFDEMVRSRIRPDRIVFMAVL 477

Query: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480
           SACSHAGLV+KGL YFRSM+EDY LNPD EIYGCVVDLLGRAGRVEEAFQL ESMPFEPD
Sbjct: 478 SACSHAGLVDKGLIYFRSMLEDYRLNPDQEIYGCVVDLLGRAGRVEEAFQLAESMPFEPD 537

Query: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540
           ESVWGALLGACK YELSNLG LAAQRVLD RPNMAGTYLLLSNIYAAEGKW EFAKMRKL
Sbjct: 538 ESVWGALLGACKEYELSNLGNLAAQRVLDMRPNMAGTYLLLSNIYAAEGKWNEFAKMRKL 597

Query: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDL 581
           MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIE VHKVL+LL+WHMKDDGDVTDL
Sbjct: 598 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIEWVHKVLELLIWHMKDDGDVTDL 653

[Close]

BLAST of CmoCh11G012830 vs. ExPASy TrEMBL
Match: A0A0A0LW37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G555630 PE=4 SV=1)

HSP 1 Score: 1038.9 bits (2685), Expect = 8.2e-300
Identity = 499/598 (83.44%), Postives = 538/598 (89.97%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60
           MS +KLASS  FHPIPLIVRNSLQWI+NS TLQS PPFTP+ PS+WATNLIKSYFDKGL+
Sbjct: 1   MSVDKLASSPHFHPIPLIVRNSLQWISNS-TLQSNPPFTPEGPSVWATNLIKSYFDKGLT 60

Query: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120
           + A NLF+E+PERDVV WTAMIVGFTSCN Y Q+W +F EMLRS++ PNAFT+SSVLKAC
Sbjct: 61  REACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKAC 120

Query: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180
           KGMKALSCG LAHSLATKHGID S+YVQNALLDMYA  CATMDDAL+VFNDIPLKTAVSW
Sbjct: 121 KGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSW 180

Query: 181 TTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTK 240
           TTLIAGFTHRGDGYSGL  FRQ+                 ACASI SY+ GKQIHAAVTK
Sbjct: 181 TTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTK 240

Query: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300
           YGLH D PV+NSILDMYCRCN LCDAKRCFGE+TE+NLITWNTLIAGYERSDSSESLSLF
Sbjct: 241 YGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLF 300

Query: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360
            QMGSEGY+PNCFTFTSITAACANLAVL CGQQVHGGI+RRGFD +VAL+N+LIDMYAKC
Sbjct: 301 FQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKC 360

Query: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420
           G+I+DSHKLFCDMP RDLVSWTTMMIGYG+HGYGKE +KLFDEMV+SGIQPDRIVFM VL
Sbjct: 361 GSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVL 420

Query: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480
             CSHAGLV+KGL YFRSM+EDYN+NPD EIY CVVDLLGRAGRVEEAFQLVE+MPFEPD
Sbjct: 421 CGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPD 480

Query: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540
           ESVWGALLGACKAY+LSNLG LAAQRVLD RPNMAGTYLLLS IYAAEGKWGEFAKMRKL
Sbjct: 481 ESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKL 540

Query: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLD 582
           MKGM+ KKEVGKSWIEIRNEVYSFVVG KMGPHIE VHKV+ +L+WHMKDDGDVTDLD
Sbjct: 541 MKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLD 597

[Close]

BLAST of CmoCh11G012830 vs. ExPASy TrEMBL
Match: A0A1S3BQ30 (putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucumis melo OX=3656 GN=LOC103492105 PE=4 SV=1)

HSP 1 Score: 1028.1 bits (2657), Expect = 1.4e-296
Identity = 496/598 (82.94%), Postives = 534/598 (89.30%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60
           MS +KLASS  FHPIPLIVRNSLQWI+NS TLQS PPFTPK PS WATNLIKSYFDKGL+
Sbjct: 1   MSVDKLASSPHFHPIPLIVRNSLQWISNS-TLQSNPPFTPKGPSFWATNLIKSYFDKGLT 60

Query: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120
           + A NLF+E+PERDVV WTAMIVGFTSCN Y Q+W +F EMLRS++ PNAFT+SSVLKAC
Sbjct: 61  REACNLFNEIPERDVVTWTAMIVGFTSCNHYPQAWTMFSEMLRSEVQPNAFTMSSVLKAC 120

Query: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180
           KGMKALSCG LAHSLATK GID S+YVQNALLDMYA  CATMDDAL+VFNDIPLKTAVSW
Sbjct: 121 KGMKALSCGALAHSLATKLGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSW 180

Query: 181 TTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTK 240
           TTLIAG THRGDGYSGL  FR++                 ACASI SY+ GKQIHAAVTK
Sbjct: 181 TTLIAGLTHRGDGYSGLLAFRKMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTK 240

Query: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300
           YGLH D PV+NSILDMYCRCN LCDAKRCF E+TE+NLITWNTLIAGYERSDSSESLSLF
Sbjct: 241 YGLHCDAPVMNSILDMYCRCNYLCDAKRCFDELTEKNLITWNTLIAGYERSDSSESLSLF 300

Query: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360
            QMGSEGY+PNCFTFTSITAACANLAVL CGQQVHGGI+RRGFD +VAL+N+LIDMYAKC
Sbjct: 301 FQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKC 360

Query: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420
           G+INDSHKLFCDMP RDLVSWTTMMIGYG+HGYGKE +KLFDEMV+SGIQPDRIVFM VL
Sbjct: 361 GSINDSHKLFCDMPGRDLVSWTTMMIGYGTHGYGKEAVKLFDEMVQSGIQPDRIVFMGVL 420

Query: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480
           S CSHAGLV++GL YFRSM+EDYN+NPD EIY CVVDLLGRAGRVEEAFQLVE+MPFEPD
Sbjct: 421 SGCSHAGLVDRGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPD 480

Query: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540
           ESVWGALLGACKA +LSNLG LAAQRVL TRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL
Sbjct: 481 ESVWGALLGACKACKLSNLGNLAAQRVLGTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540

Query: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLD 582
           MKGMD KKEVGKSWIEIRNEVYSFVVG KMGPHIE VHKV+ +L+WHMKDDGDV DL+
Sbjct: 541 MKGMDKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVADLN 597

[Close]

BLAST of CmoCh11G012830 vs. NCBI nr
Match: XP_022931578.1 (putative pentatricopeptide repeat-containing protein At1g56570 [Cucurbita moschata])

HSP 1 Score: 1203.3 bits (3112), Expect = 0.0e+00
Identity = 585/603 (97.01%), Postives = 586/603 (97.18%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60
           MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS
Sbjct: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60

Query: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120
           KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC
Sbjct: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120

Query: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180
           KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW
Sbjct: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180

Query: 181 TTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTK 240
           TTLIAGFTHRGDGYSGLQVFRQ+                 ACASIGSYAYGKQIHAAVTK
Sbjct: 181 TTLIAGFTHRGDGYSGLQVFRQMLLDNVEPNSFSFSIAVRACASIGSYAYGKQIHAAVTK 240

Query: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300
           YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF
Sbjct: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300

Query: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360
           SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC
Sbjct: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360

Query: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420
           GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL
Sbjct: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420

Query: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480
           SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD
Sbjct: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480

Query: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540
           ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL
Sbjct: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540

Query: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ 587
           MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ
Sbjct: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ 600

[Close]

BLAST of CmoCh11G012830 vs. NCBI nr
Match: KAG7022386.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1200.7 bits (3105), Expect = 0.0e+00
Identity = 584/603 (96.85%), Postives = 585/603 (97.01%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60
           MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS
Sbjct: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60

Query: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120
           KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRS IHPNAFTLSSVLKAC
Sbjct: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSHIHPNAFTLSSVLKAC 120

Query: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180
           KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW
Sbjct: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180

Query: 181 TTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTK 240
           TTLIAGFTHRGDGYSGLQVFRQ+                 ACASIGSYAYGKQIHAAVTK
Sbjct: 181 TTLIAGFTHRGDGYSGLQVFRQMLLDNVEPNSFSFSIAVRACASIGSYAYGKQIHAAVTK 240

Query: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300
           YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF
Sbjct: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300

Query: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360
           SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC
Sbjct: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360

Query: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420
           GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL
Sbjct: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420

Query: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480
           SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD
Sbjct: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480

Query: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540
           ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL
Sbjct: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540

Query: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ 587
           MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ
Sbjct: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ 600

[Close]

BLAST of CmoCh11G012830 vs. NCBI nr
Match: XP_023520790.1 (putative pentatricopeptide repeat-containing protein At1g56570 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1199.1 bits (3101), Expect = 0.0e+00
Identity = 582/603 (96.52%), Postives = 585/603 (97.01%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60
           MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS
Sbjct: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60

Query: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120
           KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRS IHPNAFTLSSVLKAC
Sbjct: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSHIHPNAFTLSSVLKAC 120

Query: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180
           KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW
Sbjct: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180

Query: 181 TTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTK 240
           TTLIAGFTHRGDGYSGLQVFRQ+                 ACASIGSYAYGKQIHAAVTK
Sbjct: 181 TTLIAGFTHRGDGYSGLQVFRQMLLDNVEPNSFSFSIAVRACASIGSYAYGKQIHAAVTK 240

Query: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300
           YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF
Sbjct: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300

Query: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360
           SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC
Sbjct: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360

Query: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420
           GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL
Sbjct: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420

Query: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480
           SACSHAGLVNKGLSYFRSM+EDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD
Sbjct: 421 SACSHAGLVNKGLSYFRSMLEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480

Query: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540
           ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL
Sbjct: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540

Query: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ 587
           MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLL+WHMKDDGDVTDLDSQ
Sbjct: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLIWHMKDDGDVTDLDSQ 600

[Close]

BLAST of CmoCh11G012830 vs. NCBI nr
Match: XP_022989366.1 (putative pentatricopeptide repeat-containing protein At1g56570 [Cucurbita maxima])

HSP 1 Score: 1190.6 bits (3079), Expect = 0.0e+00
Identity = 577/603 (95.69%), Postives = 583/603 (96.68%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60
           MSANKLASSTRFHPIPLI+RNSLQWINNSTTLQSTPPFTPK PSIWATNLIKSYFD+GLS
Sbjct: 1   MSANKLASSTRFHPIPLIIRNSLQWINNSTTLQSTPPFTPKPPSIWATNLIKSYFDRGLS 60

Query: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120
           KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC
Sbjct: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120

Query: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180
           KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW
Sbjct: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180

Query: 181 TTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTK 240
           TTLIAGFTHRGDGYSGLQVFRQ+                 ACASIGSYAYGKQIHAAVTK
Sbjct: 181 TTLIAGFTHRGDGYSGLQVFRQMLLDNVEPNSFSFSIAVRACASIGSYAYGKQIHAAVTK 240

Query: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300
           YGLHSDIPVLNSILDMYCRCN LCDAKRCFGEMT RNLITWNTLIAGYERSDSSESLSLF
Sbjct: 241 YGLHSDIPVLNSILDMYCRCNYLCDAKRCFGEMTRRNLITWNTLIAGYERSDSSESLSLF 300

Query: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360
           SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC
Sbjct: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360

Query: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420
           GNINDSHKLFCDMP+RDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL
Sbjct: 361 GNINDSHKLFCDMPQRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420

Query: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480
           SACSHAGLVNKGLSYFRSM+EDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD
Sbjct: 421 SACSHAGLVNKGLSYFRSMLEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480

Query: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540
           ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL
Sbjct: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540

Query: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDSQ 587
           MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLL+WHMKDDGDVTDLDSQ
Sbjct: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLIWHMKDDGDVTDLDSQ 600

[Close]

BLAST of CmoCh11G012830 vs. NCBI nr
Match: KAG6588590.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1066.2 bits (2756), Expect = 9.9e-308
Identity = 530/575 (92.17%), Postives = 531/575 (92.35%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60
           MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS
Sbjct: 1   MSANKLASSTRFHPIPLIVRNSLQWINNSTTLQSTPPFTPKSPSIWATNLIKSYFDKGLS 60

Query: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120
           KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC
Sbjct: 61  KHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKAC 120

Query: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180
           KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW
Sbjct: 121 KGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSW 180

Query: 181 TTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTK 240
           TTLIAGFTHRGDGYSGLQVFRQ+                 ACASIGSYAYGKQIHAAVTK
Sbjct: 181 TTLIAGFTHRGDGYSGLQVFRQMLLDNVEPNSFSFSIAVRACASIGSYAYGKQIHAAVTK 240

Query: 241 YGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSLF 300
           YGLHSDIPVLNSILDMYCR                     W      YERSDSSESLSLF
Sbjct: 241 YGLHSDIPVLNSILDMYCR---------------------W------YERSDSSESLSLF 300

Query: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360
           SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC
Sbjct: 301 SQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKC 360

Query: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420
           GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL
Sbjct: 361 GNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVL 420

Query: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480
           SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD
Sbjct: 421 SACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPD 480

Query: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540
           ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL
Sbjct: 481 ESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540

Query: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIE 559
           MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIE
Sbjct: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIE 548

[Close]

BLAST of CmoCh11G012830 vs. TAIR 10
Match: AT1G56570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 701.8 bits (1810), Expect = 4.6e-202
Identity = 344/602 (57.14%), Postives = 441/602 (73.26%), Query Frame = 0


Query: 1   MSANKLASSTRFHPIPLIVRNSLQWIN-NSTTLQSTPPFTPKSPSIWATNLIKSYFDKGL 60
           MS  KLA S  F PIP  VR+SL+     S+     PP+ PK   I ATNLI SYF+KGL
Sbjct: 1   MSITKLARSNAFKPIPNFVRSSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGL 60

Query: 61  SKHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKA 120
            + AR+LFDEMP+RDVVAWTAMI G+ S N   ++W  F EM++    PN FTLSSVLK+
Sbjct: 61  VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKS 120

Query: 121 CKGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVS 180
           C+ MK L+ G L H +  K G++GS+YV NA+++MYATC  TM+ A  +F DI +K  V+
Sbjct: 121 CRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVT 180

Query: 181 WTTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVT 240
           WTTLI GFTH GDG  GL++++Q+                 A ASI S   GKQIHA+V 
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVI 240

Query: 241 KYGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERSDSSESLSL 300
           K G  S++PV+NSILD+YCRC  L +AK  F EM +++LITWNTLI+  ERSDSSE+L +
Sbjct: 241 KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLM 300

Query: 301 FSQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAK 360
           F +  S+G+ PNC+TFTS+ AACAN+A L CGQQ+HG I RRGF+ +V L NALIDMYAK
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK 360

Query: 361 CGNINDSHKLFCD-MPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMA 420
           CGNI DS ++F + + RR+LVSWT+MMIGYGSHGYG E ++LFD+MV SGI+PDRIVFMA
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420

Query: 421 VLSACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFE 480
           VLSAC HAGLV KGL YF  M  +Y +NPD +IY CVVDLLGRAG++ EA++LVE MPF+
Sbjct: 421 VLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFK 480

Query: 481 PDESVWGALLGACKAYELSNL-GKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKM 540
           PDES WGA+LGACKA++ + L  +LAA++V++ +P M GTY++LS IYAAEGKW +FA++
Sbjct: 481 PDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARV 540

Query: 541 RKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDL 583
           RK+M+ M NKKE G SWI + N+V+SF V DKM P+   V+ VL LL+   ++ G V +L
Sbjct: 541 RKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPEL 600

[Close]

BLAST of CmoCh11G012830 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 392.9 bits (1008), Expect = 4.5e-109
Identity = 208/581 (35.80%), Postives = 319/581 (54.91%), Query Frame = 0


Query: 58  GLSKHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVL 117
           G    A +LF  MPERD   W +M+ GF   +   ++   F  M +     N ++ +SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159

Query: 118 KACKGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTA 177
            AC G+  ++ G   HSL  K      +Y+ +AL+DMY+  C  ++DA  VF+++  +  
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK-CGNVNDAQRVFDEMGDRNV 219

Query: 178 VSWTTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAA 237
           VSW +LI  F   G     L VF+ +                 ACAS+ +   G+++H  
Sbjct: 220 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 279

Query: 238 VTKYG-LHSDIPVLNSILDMYCRCNCLCD------------------------------- 297
           V K   L +DI + N+ +DMY +C+ + +                               
Sbjct: 280 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 339

Query: 298 AKRCFGEMTERNLITWNTLIAGY-ERSDSSESLSLFSQMGSEGYEPNCFTFTSITAACAN 357
           A+  F +M ERN+++WN LIAGY +  ++ E+LSLF  +  E   P  ++F +I  ACA+
Sbjct: 340 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 399

Query: 358 LAVLGCGQQVHGGIIRRGF------DNSVALVNALIDMYAKCGNINDSHKLFCDMPRRDL 417
           LA L  G Q H  +++ GF      ++ + + N+LIDMY KCG + + + +F  M  RD 
Sbjct: 400 LAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 459

Query: 418 VSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVLSACSHAGLVNKGLSYFRS 477
           VSW  M+IG+  +GYG E ++LF EM+ SG +PD I  + VLSAC HAG V +G  YF S
Sbjct: 460 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 519

Query: 478 MVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPDESVWGALLGACKAYELSN 537
           M  D+ + P  + Y C+VDLLGRAG +EEA  ++E MP +PD  +WG+LL ACK +    
Sbjct: 520 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT 579

Query: 538 LGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIR 583
           LGK  A+++L+  P+ +G Y+LLSN+YA  GKW +   +RK M+     K+ G SWI+I+
Sbjct: 580 LGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 639

[Close]

BLAST of CmoCh11G012830 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 375.6 bits (963), Expect = 7.5e-104
Identity = 200/546 (36.63%), Postives = 301/546 (55.13%), Query Frame = 0


Query: 63  ARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHPNAFTLSSVLKACKG 122
           A + F E    +VV W  M+V +   +D   S+ +F +M   +I PN +T  S+LK C  
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502

Query: 123 MKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTVFNDIPLKTAVSWTT 182
           +  L  G   HS   K     + YV + L+DMYA     +D A  +      K  VSWTT
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK-LGKLDTAWDILIRFAGKDVVSWTT 562

Query: 183 LIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSYAYGKQIHAAVTKYG 242
           +IAG+T        L  FRQ+                 ACA + +   G+QIHA     G
Sbjct: 563 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 622

Query: 243 LHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGYERS-DSSESLSLFS 302
             SD+P  N+++ +Y RC  + ++   F +    + I WN L++G+++S ++ E+L +F 
Sbjct: 623 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 682

Query: 303 QMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKCG 362
           +M  EG + N FTF S   A +  A +  G+QVH  I + G+D+   + NALI MYAKCG
Sbjct: 683 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 742

Query: 363 NINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVLS 422
           +I+D+ K F ++  ++ VSW  ++  Y  HG+G E +  FD+M+ S ++P+ +  + VLS
Sbjct: 743 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 802

Query: 423 ACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPDE 482
           ACSH GLV+KG++YF SM  +Y L+P  E Y CVVD+L RAG +  A + ++ MP +PD 
Sbjct: 803 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 862

Query: 483 SVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLM 542
            VW  LL AC  ++   +G+ AA  +L+  P  + TY+LLSN+YA   KW      R+ M
Sbjct: 863 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 922

Query: 543 KGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVWHMKDDGDVTDLDS-- 586
           K    KKE G+SWIE++N ++SF VGD+  P  + +H+  + L     + G V D  S  
Sbjct: 923 KEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLL 982

[Close]

BLAST of CmoCh11G012830 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 375.6 bits (963), Expect = 7.5e-104
Identity = 194/546 (35.53%), Postives = 312/546 (57.14%), Query Frame = 0


Query: 49  NLIKSYFDKGLSKHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIHP 108
           +L+  Y        AR +FDEM ERDV++W ++I G+ S     +  +VF +ML S I  
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294

Query: 109 NAFTLSSVLKACKGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALTV 168
           +  T+ SV   C   + +S G   HS+  K          N LLDMY+  C  +D A  V
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK-CGDLDSAKAV 354

Query: 169 FNDIPLKTAVSWTTLIAGFTHRGDGYSGLQVFRQI-----------------ACASIGSY 228
           F ++  ++ VS+T++IAG+   G     +++F ++                  CA     
Sbjct: 355 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 414

Query: 229 AYGKQIHAAVTKYGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLIAGY 288
             GK++H  + +  L  DI V N+++DMY +C  + +A+  F EM  +++I+WNT+I GY
Sbjct: 415 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 474

Query: 289 ERS-DSSESLSLFSQMGSE-GYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFDNS 348
            ++  ++E+LSLF+ +  E  + P+  T   +  ACA+L+    G+++HG I+R G+ + 
Sbjct: 475 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 534

Query: 349 VALVNALIDMYAKCGNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEMVR 408
             + N+L+DMYAKCG +  +H LF D+  +DLVSWT M+ GYG HG+GKE I LF++M +
Sbjct: 535 RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 594

Query: 409 SGIQPDRIVFMAVLSACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGRVE 468
           +GI+ D I F+++L ACSH+GLV++G  +F  M  +  + P  E Y C+VD+L R G + 
Sbjct: 595 AGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLI 654

Query: 469 EAFQLVESMPFEPDESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNIYA 528
           +A++ +E+MP  PD ++WGALL  C+ +    L +  A++V +  P   G Y+L++NIYA
Sbjct: 655 KAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYA 714

Query: 529 AEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLLVW 576
              KW +  ++RK +     +K  G SWIEI+  V  FV GD   P  E +   L+ +  
Sbjct: 715 EAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRA 774

[Close]

BLAST of CmoCh11G012830 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 374.0 bits (959), Expect = 2.2e-103
Identity = 188/555 (33.87%), Postives = 313/555 (56.40%), Query Frame = 0


Query: 48  TNLIKSYFDKGLSKHARNLFDEMPERDVVAWTAMIVGFTSCNDYTQSWAVFCEMLRSDIH 107
           T LI +    G    AR +FD++P   +  W A+I G++  N +  +  ++  M  + + 
Sbjct: 57  TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116

Query: 108 PNAFTLSSVLKACKGMKALSCGTLAHSLATKHGIDGSMYVQNALLDMYATCCATMDDALT 167
           P++FT   +LKAC G+  L  G   H+   + G D  ++VQN L+ +YA  C  +  A T
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK-CRRLGSART 176

Query: 168 VFNDIPL--KTAVSWTTLIAGFTHRGDGYSGLQVFRQI-----------------ACASI 227
           VF  +PL  +T VSWT +++ +   G+    L++F Q+                 A   +
Sbjct: 177 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 236

Query: 228 GSYAYGKQIHAAVTKYGLHSDIPVLNSILDMYCRCNCLCDAKRCFGEMTERNLITWNTLI 287
                G+ IHA+V K GL  +  +L S+  MY +C  +  AK  F +M   NLI WN +I
Sbjct: 237 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 296

Query: 288 AGYERSD-SSESLSLFSQMGSEGYEPNCFTFTSITAACANLAVLGCGQQVHGGIIRRGFD 347
           +GY ++  + E++ +F +M ++   P+  + TS  +ACA +  L   + ++  + R  + 
Sbjct: 297 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 356

Query: 348 NSVALVNALIDMYAKCGNINDSHKLFCDMPRRDLVSWTTMMIGYGSHGYGKEVIKLFDEM 407
           + V + +ALIDM+AKCG++  +  +F     RD+V W+ M++GYG HG  +E I L+  M
Sbjct: 357 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 416

Query: 408 VRSGIQPDRIVFMAVLSACSHAGLVNKGLSYFRSMVEDYNLNPDHEIYGCVVDLLGRAGR 467
            R G+ P+ + F+ +L AC+H+G+V +G  +F  M  D+ +NP  + Y CV+DLLGRAG 
Sbjct: 417 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGH 476

Query: 468 VEEAFQLVESMPFEPDESVWGALLGACKAYELSNLGKLAAQRVLDTRPNMAGTYLLLSNI 527
           +++A+++++ MP +P  +VWGALL ACK +    LG+ AAQ++    P+  G Y+ LSN+
Sbjct: 477 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 536

Query: 528 YAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKMGPHIECVHKVLKLL 583
           YAA   W   A++R  MK     K+VG SW+E+R  + +F VGDK  P  E + + ++ +
Sbjct: 537 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 596

The following BLAST results are available for this feature:

BLAST of CmoCh11G012830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXA9	6.4e-201	57.14	Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis th...	[more]
Q9SIT7	6.4e-108	35.80	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9SVP7	1.1e-102	36.63	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX...	[more]
Q9SN39	1.1e-102	35.53	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
Q9LTV8	3.1e-102	33.87	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]

BLAST of CmoCh11G012830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZ33	0.0e+00	97.01	putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucurbita mosc...	[more]
A0A6J1JJV4	0.0e+00	95.69	putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucurbita maxi...	[more]
A0A6J1DTG1	4.5e-306	86.10	putative pentatricopeptide repeat-containing protein At1g56570 OS=Momordica char...	[more]
A0A0A0LW37	8.2e-300	83.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G555630 PE=4 SV=1	[more]
A0A1S3BQ30	1.4e-296	82.94	putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucumis melo O...	[more]

BLAST of CmoCh11G012830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931578.1	0.0e+00	97.01	putative pentatricopeptide repeat-containing protein At1g56570 [Cucurbita moscha...	[more]
KAG7022386.1	0.0e+00	96.85	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_023520790.1	0.0e+00	96.52	putative pentatricopeptide repeat-containing protein At1g56570 [Cucurbita pepo s...	[more]
XP_022989366.1	0.0e+00	95.69	putative pentatricopeptide repeat-containing protein At1g56570 [Cucurbita maxima...	[more]
KAG6588590.1	9.9e-308	92.17	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]

BLAST of CmoCh11G012830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56570.1	4.6e-202	57.14	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	4.5e-109	35.80	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G13650.1	7.5e-104	36.63	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18750.1	7.5e-104	35.53	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G12770.1	2.2e-103	33.87	mitochondrial editing factor 22	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 427..458 e-value: 6.7E-6 score: 25.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 178..202 e-value: 0.19 score: 12.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 398..431 e-value: 0.0014 score: 16.6 coord: 362..395 e-value: 3.1E-8 score: 31.3 coord: 76..110 e-value: 5.0E-5 score: 21.2 coord: 334..362 e-value: 2.4E-4 score: 19.0 coord: 434..459 e-value: 4.4E-4 score: 18.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 360..406 e-value: 5.5E-9 score: 36.1 coord: 260..306 e-value: 1.8E-7 score: 31.3 coord: 73..120 e-value: 2.2E-10 score: 40.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 260..293 score: 8.801982
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 74..108 score: 10.292718
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 360..394 score: 12.189023
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 311..423 e-value: 1.7E-26 score: 95.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 208..310 e-value: 4.7E-19 score: 70.4 coord: 126..207 e-value: 7.9E-8 score: 33.8 coord: 39..125 e-value: 1.8E-17 score: 65.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 424..531 e-value: 7.8E-6 score: 27.5
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 1..583
None	No IPR available	PANTHER	PTHR47925:SF28	BNAA09G15330D PROTEIN	coord: 1..583

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G012830.1	CmoCh11G012830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding