CmoCh11G012390 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G012390
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptiontranslationally-controlled tumor protein homolog
LocationCmo_Chr11: 7744759 .. 7746094 (+)
RNA-Seq ExpressionCmoCh11G012390
SyntenyCmoCh11G012390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCACTTCGATCCGTTTTCTTCCTTCTCCCTGCCTATAAACATTCACCGCCCTAGCGTTCTCCTTACGCTCTCTTTCTTTCTTCACCTTTTCCACTCTCCGTTTATCCTTCCATTCTCTCCCTCCTCCAATTTTGTTTGCAGCCATGATCGTCTACCATGACCAACTTACAGGTATTTCCCCCTCTCCTTCTTCAATTCCCCCTTTAAATCCTTTTTTGTTTCTGTTTCGCTCTTACTGTTGCTCCCAATCTTGCTCCCCCAAGAAATTTTATCCTTCTTTATGTATTGGATCATTCAATGCCGAAGTTCGGATTGGTTTGGGGCTTTTAGGTGTTCTGTTTTTGTGCTTGACTAGACTCCATTAATGAACTCAGGTGATGAACTTCTGTCAGACTCCTTCCCATACAAGGAGATTGAGAATGAGATGTTGTGGGAAGTGGAAGGAAAGGTAAGGAAACTGACATATTCTTCTAGTAATCTGCAAGTCTATTGATTCAACTAATAACGAATCATAGATGAAGTTTTTTCGAGACTGACATGAGTTTAATCCCTGTGTTTTGCTTATTTGTCTGGAGTTTCTTATTCTGGGTAATTTGGCCTTTGGATAACAGTGGATTGTACAAGGAGCAGTGGACGTAGACATTGGGGCGAACCCGTCTGCAGAAGGAGGTGAAGAAGATGAATGCGTGGAGGAAGAAGCTGTGAAGGTTGTGGATATTGTTGACACCTTCAGACTTCAGGTAAGAAAGAGTTGTGTTTTTCATTTCATTGGTATATAGTTTGGTTTTGAATGAATGGGTAAGAGAGGAGTGTTGTGTGTGCGTGGGCATATATATTGGCAGGAACAACCTCCATTTGACAAGAAGCAGTTTATCACATACATGAAAAGATACATAAAGCTACTAACTCCCAAACTGGATGAAGAGAAACAAGAGGTGTTTAAGAAGCACATTCCAGAGGCAACCAAGTTCCTGCTCAGCAAGATCAATGACCTCCAATTGTAAGTTGAAGCTTTGTTTATTGTTAGGACACATCAAGAAGTTTGGTTATTAAGCTCAAATGGGTTGAATTGAATGCAGCTTTGTGGGGGAAGGCATGCATGATGATGCAGCTCTGGTTTTTGCATACTACAAAGAAGGGGCGACTGATCCTACATTTATCTATATTGCCTATGGGTTGAAGGAAGTCAAGTGCTGAAGGAATCCCATCTTTTTCTGCTCGCAATACTTCTCTTTTTCTTTTTTATATGCTAAGCTAATTTACATCAACTTTATGCCCCCAATCCCAAAATACAATATACTATAATATAATATATGGCATGCATTATTTTATCA

mRNA sequence

TCCCACTTCGATCCGTTTTCTTCCTTCTCCCTGCCTATAAACATTCACCGCCCTAGCGTTCTCCTTACGCTCTCTTTCTTTCTTCACCTTTTCCACTCTCCGTTTATCCTTCCATTCTCTCCCTCCTCCAATTTTGTTTGCAGCCATGATCGTCTACCATGACCAACTTACAGGTGATGAACTTCTGTCAGACTCCTTCCCATACAAGGAGATTGAGAATGAGATGTTGTGGGAAGTGGAAGGAAAGTGGATTGTACAAGGAGCAGTGGACGTAGACATTGGGGCGAACCCGTCTGCAGAAGGAGGTGAAGAAGATGAATGCGTGGAGGAAGAAGCTGTGAAGGTTGTGGATATTGTTGACACCTTCAGACTTCAGGAACAACCTCCATTTGACAAGAAGCAGTTTATCACATACATGAAAAGATACATAAAGCTACTAACTCCCAAACTGGATGAAGAGAAACAAGAGGTGTTTAAGAAGCACATTCCAGAGGCAACCAAGTTCCTGCTCAGCAAGATCAATGACCTCCAATTCTTTGTGGGGGAAGGCATGCATGATGATGCAGCTCTGGTTTTTGCATACTACAAAGAAGGGGCGACTGATCCTACATTTATCTATATTGCCTATGGGTTGAAGGAAGTCAAGTGCTGAAGGAATCCCATCTTTTTCTGCTCGCAATACTTCTCTTTTTCTTTTTTATATGCTAAGCTAATTTACATCAACTTTATGCCCCCAATCCCAAAATACAATATACTATAATATAATATATGGCATGCATTATTTTATCA

Coding sequence (CDS)

ATGATCGTCTACCATGACCAACTTACAGGTGATGAACTTCTGTCAGACTCCTTCCCATACAAGGAGATTGAGAATGAGATGTTGTGGGAAGTGGAAGGAAAGTGGATTGTACAAGGAGCAGTGGACGTAGACATTGGGGCGAACCCGTCTGCAGAAGGAGGTGAAGAAGATGAATGCGTGGAGGAAGAAGCTGTGAAGGTTGTGGATATTGTTGACACCTTCAGACTTCAGGAACAACCTCCATTTGACAAGAAGCAGTTTATCACATACATGAAAAGATACATAAAGCTACTAACTCCCAAACTGGATGAAGAGAAACAAGAGGTGTTTAAGAAGCACATTCCAGAGGCAACCAAGTTCCTGCTCAGCAAGATCAATGACCTCCAATTCTTTGTGGGGGAAGGCATGCATGATGATGCAGCTCTGGTTTTTGCATACTACAAAGAAGGGGCGACTGATCCTACATTTATCTATATTGCCTATGGGTTGAAGGAAGTCAAGTGCTGA

Protein sequence

MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVEEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Homology
[Close]
BLAST of CmoCh11G012390 vs. ExPASy Swiss-Prot
Match: Q5J907 (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera OX=51953 GN=TCTP PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.4e-78
Identity = 139/168 (82.74%), Postives = 154/168 (91.67%), Query Frame = 0 

Query: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VY D LTGDELLSDSFPYKEI N MLWEVEGKW++QGAV+VDIGANPSAEGGEEDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           +++AVKVVDIVDTFRLQEQP FDKKQF+T+MKRYIK LTPKLD EKQE+FKKHI  ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSK++DLQFFVGE MHDD  LVFAYYK+GATDPTF+Y AYGLKE+KC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168

[Close]
BLAST of CmoCh11G012390 vs. ExPASy Swiss-Prot
Match: Q9ZSW9 (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis OX=3981 GN=TCTP PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.8e-76
Identity = 138/168 (82.14%), Postives = 153/168 (91.07%), Query Frame = 0 

Query: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VY D LTGDELLSDSFPYKEI N +LWEVEGKW+VQGAVDVDIGANPSAEG +EDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           +++AVKVVDIVDTFRLQEQP FDKKQF+TYMKR+IKLLTPKLDEEKQE FKK+I  ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSK++DLQFFVGE MHDD +LVFAYY+ GATDPTF+Y AY LKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168

[Close]
BLAST of CmoCh11G012390 vs. ExPASy Swiss-Prot
Match: P43349 (Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN=TCTP PE=2 SV=2)

HSP 1 Score: 279.3 bits (713), Expect = 3.0e-74
Identity = 133/168 (79.17%), Postives = 152/168 (90.48%), Query Frame = 0 

Query: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VY D LTGDELLSDSFPYKEI+N MLWEV+GKW+VQGAVDV+IGANPSAEGG EDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           +++AVKVVDIVDTFRLQEQP FDKKQF+TY+KRYIK LTPKL+ E QE FKK+I  ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSK+ D QFFVGEGMHDD+ALVFAYYK+G+ DPTF+Y+A GLKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of CmoCh11G012390 vs. ExPASy Swiss-Prot
Match: P35681 (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica OX=39947 GN=TCTP PE=1 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-73
Identity = 131/168 (77.98%), Postives = 151/168 (89.88%), Query Frame = 0 

Query: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VY D LTGDELLSDSFPY+EIEN +LWEV+GKW+VQGA+DVDIGANPSAEGG +DE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGV 60

Query: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           +++AVKVVDIVDTFRLQEQPPFDKKQF+T+MKRYIK L+ KLD EKQE FKK+I  ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKY 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LL K+ DLQFFVGE MHDD  LVFAYYK+GATDPTF+Y ++GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168

[Close]
BLAST of CmoCh11G012390 vs. ExPASy Swiss-Prot
Match: Q944T2 (Translationally-controlled tumor protein homolog OS=Glycine max OX=3847 GN=TCTP PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.5e-73
Identity = 135/168 (80.36%), Postives = 148/168 (88.10%), Query Frame = 0 

Query: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VY D LTGDELLSDSF YKEIEN MLWEVEGKW+V+GAVDVDIGANPSAEGG EDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           ++ AVKVVDIVDTFRLQEQP FDKKQF+T+MKR+IK LTPKLD E+QE+FKKHI  ATK+
Sbjct: 61  DDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKY 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSKI D QFFVGE M DDA LVFAYYK+GA DPTF+Y AY LKEVKC
Sbjct: 121 LLSKIKDFQFFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168

[Close]
BLAST of CmoCh11G012390 vs. ExPASy TrEMBL
Match: A0A6J1EV23 (translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437879 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.1e-91
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV
Sbjct: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60

Query: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF
Sbjct: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]
BLAST of CmoCh11G012390 vs. ExPASy TrEMBL
Match: A0A6J1HY50 (translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469078 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.2e-90
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0 

Query: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           MIVY DQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV
Sbjct: 1   MIVYQDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60

Query: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF
Sbjct: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]
BLAST of CmoCh11G012390 vs. ExPASy TrEMBL
Match: A0A6J1HY60 (translationally-controlled tumor protein homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469078 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 9   TGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVEEEAVKVV 68
           +GDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVEEEAVKVV
Sbjct: 3   SGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVEEEAVKVV 62

Query: 69  DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL 128
           DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL
Sbjct: 63  DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL 122

Query: 129 QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 123 QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 162

[Close]
BLAST of CmoCh11G012390 vs. ExPASy TrEMBL
Match: A0A6J1F0A0 (translationally-controlled tumor protein homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437879 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 9   TGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVEEEAVKVV 68
           +GDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVEEEAVKVV
Sbjct: 3   SGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECVEEEAVKVV 62

Query: 69  DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL 128
           DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL
Sbjct: 63  DIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKFLLSKINDL 122

Query: 129 QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 123 QFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 162

[Close]
BLAST of CmoCh11G012390 vs. ExPASy TrEMBL
Match: A0A5D3CG94 (Translationally-controlled tumor protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004100 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.4e-81
Identity = 148/168 (88.10%), Postives = 160/168 (95.24%), Query Frame = 0 

Query: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M++Y D LTGDELLSDSFPY EIEN MLWEVEGKW+VQGA+DVDIGANPSAEG +EDE V
Sbjct: 1   MLLYQDLLTGDELLSDSFPYNEIENGMLWEVEGKWVVQGAIDVDIGANPSAEGADEDEGV 60

Query: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           +++AVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQE+FKK+IPEATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQELFKKYIPEATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SKINDLQFFVGEGMHDD  +VFAYYKEGATDPTFIYIAYGLKEVKC
Sbjct: 121 LISKINDLQFFVGEGMHDDGTMVFAYYKEGATDPTFIYIAYGLKEVKC 168

[Close]
BLAST of CmoCh11G012390 vs. TAIR 10
Match: AT3G05540.1 (Methionine sulfoxide reductase (MSS4-like) family protein )

HSP 1 Score: 264.6 bits (675), Expect = 5.3e-71
Identity = 127/169 (75.15%), Postives = 148/169 (87.57%), Query Frame = 0 

Query: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VY D LTGDELLSDSFPYKEIEN MLWEVEGKW+V+GA+D DIGANP  EGG EDE V
Sbjct: 1   MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEGG-EDEGV 60

Query: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           +++AVKVVDI+DTFRLQEQP FDKKQF+ +MKRYIK L+PKLD E QE+FKKHI  ATKF
Sbjct: 61  DDQAVKVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 120

Query: 121 LLSKINDLQFFVGEGMH-DDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           L+SK+ D QFFVGE M  ++ +LVFAYY+EGATDPTF+Y+AYGLKE+KC
Sbjct: 121 LMSKLKDFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

[Close]
BLAST of CmoCh11G012390 vs. TAIR 10
Match: AT3G16640.1 (translationally controlled tumor protein )

HSP 1 Score: 261.9 bits (668), Expect = 3.5e-70
Identity = 127/168 (75.60%), Postives = 144/168 (85.71%), Query Frame = 0 

Query: 1   MIVYHDQLTGDELLSDSFPYKEIENEMLWEVEGKWIVQGAVDVDIGANPSAEGGEEDECV 60
           M+VY D LTGDELLSDSFPYKEIEN +LWEVEGKW+  GAVDV+IGANPSAE G EDE V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 61  EEEAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLDEEKQEVFKKHIPEATKF 120
           ++   KVVDIVDTFRLQEQP +DKK FI Y+K+YIKLLTPKL EE Q VFKK I  ATKF
Sbjct: 61  DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query: 121 LLSKINDLQFFVGEGMHDDAALVFAYYKEGATDPTFIYIAYGLKEVKC 169
           LL +++D QFFVGEGMHDD+ LVFAYYKEG+T+PTF+Y A+GLKEVKC
Sbjct: 121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

The following BLAST results are available for this feature:
BLAST of CmoCh11G012390 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5J9073.4e-7882.74Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tener... [more]
Q9ZSW91.8e-7682.14Translationally-controlled tumor protein homolog OS=Hevea brasiliensis OX=3981 G... [more]
P433493.0e-7479.17Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN... [more]
P356811.1e-7377.98Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica... [more]
Q944T22.5e-7380.36Translationally-controlled tumor protein homolog OS=Glycine max OX=3847 GN=TCTP ... [more]
BLAST of CmoCh11G012390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EV236.1e-91100.00translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita moschat... [more]
A0A6J1HY505.2e-9099.40translationally-controlled tumor protein homolog isoform X1 OS=Cucurbita maxima ... [more]
A0A6J1HY601.7e-8599.38translationally-controlled tumor protein homolog isoform X2 OS=Cucurbita maxima ... [more]
A0A6J1F0A01.7e-8599.38translationally-controlled tumor protein homolog isoform X2 OS=Cucurbita moschat... [more]
A0A5D3CG944.4e-8188.10Translationally-controlled tumor protein-like protein OS=Cucumis melo var. makuw... [more]
BLAST of CmoCh11G012390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05540.15.3e-7175.15Methionine sulfoxide reductase (MSS4-like) family protein [more]
AT3G16640.13.5e-7075.60translationally controlled tumor protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018105Translationally controlled tumour proteinPRINTSPR01653TCTPROTEINcoord: 1..21
score: 60.54
coord: 46..57
score: 70.54
coord: 60..79
score: 56.79
IPR018105Translationally controlled tumour proteinPFAMPF00838TCTPcoord: 1..164
e-value: 4.6E-57
score: 192.9
IPR018105Translationally controlled tumour proteinPANTHERPTHR11991TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATEDcoord: 1..168
IPR011323Mss4/translationally controlled tumour-associated TCTPGENE3D2.170.150.10Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain Acoord: 1..168
e-value: 9.3E-58
score: 197.2
NoneNo IPR availablePANTHERPTHR11991:SF11TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN HOMOLOGcoord: 1..168
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01002TCTP_1coord: 45..55
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01003TCTP_2coord: 125..147
IPR034737Translationally controlled tumour protein (TCTP) domainPROSITEPS51797TCTP_3coord: 1..168
score: 58.607811
IPR011057Mss4-like superfamilySUPERFAMILY51316Mss4-likecoord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G012390.1CmoCh11G012390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005509 calcium ion binding