CmoCh11G012320 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G012320
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr11: 7510139 .. 7513505 (+)
RNA-Seq ExpressionCmoCh11G012320
SyntenyCmoCh11G012320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAGATCTCTCCACACCAAGGAACCACAATGTTTCGTCCTTCCTTTTTCTTCCAATTAGTGAAGCGGAAGTCGGTAAGTTTGCTCTTGTCTTAAGAAGTGCTATGCTATCAGTCATTTTTGTTTAGTAACAAGTCCTGTGAAAGGATTGGTAAAAAGGCTGCAAGTAATCCGTAAGGCAGTAAGCTCCTACATATAAGTTTCTCTTCGGTACCATCATTCACTCACTGAGATACGTATCCGACTCAATATCTTTAAGACCTCCCGAAGATCAAAAGCAAGCTGTTGGGTAGTTCGGCTTTTGACTAAGATAGATATCATCCACATACATACTTCCATGTTTTTACCGATCTGCAGCTTGTTCACTAGCCTCTGGTAAGTGTCTCTGGCATTTTGTAGGCCTAAGGGCATGGTGGTATAAGAGTTCCTACTTCGTTAATGAAAGAATCGTCTTCTCTTCTTCCATTGCTGTTTGATGAGAAGCTTTATATAGAAGATTGAATATCCGACAGTGGAATCAACGAGTGGATCTATCCTGGTTAAGGGATATAAGGTATAACAGTATTTAGGGCAAGCTCAGTGAAGTCCACACACATCCTCCACCACCCTCCTTCTTTACCAGAACGAGATTGGCGAGCCCCGCCGAGTAGTATACTTCTTGTCCTTCATCAGTTGAGCAACTTCTTGATTGATCACTTCGTTCCGTTCAGGGGCAAATCTTCTCTTCTTCTCTTTTCTCGGTTTCATCCGAATGAGTTCAATGAATCCCTAATTCGTTACACTCATTTCCCTATTGATTCCCTATCCTATGTCTTCTCTTTTCTTTCCGCTCTTCTTCGTCCATTGACATGCCTAGGTAATTAGTCAGAAGCAGAAGGACAATGACACTAGCTAACTAGAGAGTCAAATAGATAGATAGATTCATTAGTTGCTAAAGGAAAGAAGTGGAATCAGACTCAATTTCAGTTCATCACAGGGATTCGGAAGTAGTAGTTTCAGTAGCCGTATTTGATGATGTTGATGTTTCAAAGTCACTTCAGGAATTTAGCATTGAAGATAAGGACAGAAGAAGATAGGTAGCTTTCCGCCCTAACTAAAAGATATAAATCTTAATAGGATGCAGCTCGGCCCGATCTATCTTCGGTCGTAACTAAGATAGATCGATTAATCTCCGAGATAAAGTGGAAGTCATCTATTGAGGACAGGACTAGGCGGGTAGGTGACGGAGCTTGAATAGCTTACTGAATTAGCTCAGTGAATTAGCTCAGTAAGGCCTACTCTCTTCAGTCTATAGGAGTTCAGTCGGGAAGATCAGGGCGGCCCCGTAAAGCAAGAAATCCCTCAATCCAGTTAGTTGGAAATCTTCTTTAGGGTAAAAGGCTGGTTTAGCTCAACAATTGATAGATTGCATTATATTGTCTGCTTCTTTGTTCTATTTGCCGCTAAAAGCATTCTGTCCGGATGGTTTCAAAAGCGCTAAAAAGCAGTTATCTATCACCTGCTGATGAAGTGGTGAGGTTTGCAGAGAATACACTAAAGATCTCCTTTTATTTTAAAAGAAGAAATTCTCATAGGCCTTTATTTCATTCAAAGTTTCGAGATTCCAAGGCAGCTTTTCTTTAGTCCTCAAGAGGGCCTGTAGAATGTAGAAAATCAGACTAACCTCTTGAGATTTGAGTATTATCAATAGAATGCCTTGGTTTAGACTGATAAGGGCTTTTCTTTTGTAACTACCTAATCCCCCGTGGTCTGACTAAGGAAATTGTTGAAGCTGCAGTTACAGAGGGGAGAATTGAATCTAAGGCTTTGCCTCTAGGATCATCTTACCTTCTATCTAACTAAGGCTGTTTTTCTACTAATTCAATCGTCACCTTACTTAACTAGAGAGCAGATGCTGGAGGGGAAGATCGGGCGCCCCAGGCTTGAGCCTTTAAAGGTTTGCTGTGATGTGATAGGCACGAAGTCAAGCAACCTATGAGTAAGTACTCCCGGTCTATACCTTGGCTAAAGTCTCTTGCCAGGCTAAGCTACATTGGTTTTCTATCCCTAAAGAGAATAGGCATCTTATTACGGATAAAACTACTTTTAAGAAAGAATGATGATCATATATATTCTGTCCAGAAAACGCATTATCAAGCTTTATAGAGGTAGGCAGTGACTCCACGGATAGGCAAAGGGGAGATAGATTGCGAAAACTGAATTATGATCAAGTTTAGTGAGCTTTAGGTATTGGTATTGATCAGGCTTTTTGTCCCGAAGTCATTCTCCATTCCTATTTTGAATAGCAATGGTAAGCACAGGAGTTTTCTTGCTCTCGCTATCGTACGCCTTTACCCAAGCACTAACTAAGCCTTCATCCTCTCCTTATACTCTTCCTGCGCTGTACCTTTTCTCAATCCTCTCGCTATCGGTAAAGCAACTATGTACCTTTCAGTCGGTATAGTGTCTTTTGCTTCCCTTACTCCACTCTTTTCTCCTTCCTTCGTTCCTAGCCATCCAGTTAGATATGTATAGAAAGTTCTTTCACCTGGGGATCATACCTTCTTTCTCTTTTCGAGTCACTTCTGGCTACCATTGGATTCTTGGTAGATAGGGTTTCCTAGGTCCCTAGGCTGGGATAGGTTGCTTTCAGTGCTCCTTCCTATACAACCACTTAATTGCCTTCGCATACAAGTAGATGGCTATGCGGACTCCTTGGTAAGACTACGGCCACTAATCATCTTCGTTTTCATCATCCTATTAGTACCGTATCGTATAAGGGGAAGGGGTAGGCTCAGTAGTTCAGGATAATGAGTCGGCAAGTCTTTGAACAACTGCCATCTCAGCAGCGACACACGAATTAGGGAAAGAAAGAGCAGCTTTGTAAAGCGATTCATATCGATTACTTAACGCCCTCCTCTTCCCTGCTAGTATCCCTTACCATTAAGGTTAGATGTGTGAATGGAACTGAAAGAAAGACTGCTGGAGAATATGGGTCTACTTTATATGCTGGCTTGGTTGATAATATACGAGGACTCTCTATTGTCGCGATTGATGATGATCAAGAAACGGGAGATATGAATGGTTGGGTCATGGTCAGCAATGAGGATCTTCAAAACGAAATAGGAAATATACATATAGTAGCTCGGTAATGTGTTCTTTAGCAGCATTCTCCCACTATCCATTTCTCTTCTTCCTTTCCGTGCCTTTGAGGATTGATTTTCGATATGGTATGCTGTAGGTCTGTGTCAAAGGTGGAACTGAACAAGGAGTTGATGAAGAACGAGAAGGCCTCTCTCCAGGGCAGCCTCATCCTTCTTTTGTCTTGTCCTCCTCTTCGTCGGAATCAAGTTCTTCCTCAGATGAGTACTCCTCCTCACACTAG

mRNA sequence

ATGGCAGAGATCTCTCCACACCAAGGAACCACAATGTTTCGTCCTTCCTTTTTCTTCCAATTAGTGAAGCGGAAGTCGGTCTGTGTCAAAGGTGGAACTGAACAAGGAGTTGATGAAGAACGAGAAGGCCTCTCTCCAGGGCAGCCTCATCCTTCTTTTGTCTTGTCCTCCTCTTCGTCGGAATCAAGTTCTTCCTCAGATGAGTACTCCTCCTCACACTAG

Coding sequence (CDS)

ATGGCAGAGATCTCTCCACACCAAGGAACCACAATGTTTCGTCCTTCCTTTTTCTTCCAATTAGTGAAGCGGAAGTCGGTCTGTGTCAAAGGTGGAACTGAACAAGGAGTTGATGAAGAACGAGAAGGCCTCTCTCCAGGGCAGCCTCATCCTTCTTTTGTCTTGTCCTCCTCTTCGTCGGAATCAAGTTCTTCCTCAGATGAGTACTCCTCCTCACACTAG

Protein sequence

MAEISPHQGTTMFRPSFFFQLVKRKSVCVKGGTEQGVDEEREGLSPGQPHPSFVLSSSSSESSSSSDEYSSSH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G012320.1CmoCh11G012320.1mRNA