CmoCh11G010990 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G010990
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger protein GIS2-like
Location	Cmo_Chr11: 6142067 .. 6146083 (+)
RNA-Seq Expression	CmoCh11G010990
Synteny	CmoCh11G010990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATCTTCGTTCTCGAGCGGCTGTTCTTCCGCGAATCGTCTCTCAGTTGCAGCTTCGTTCGTAATTTAACATCTTCAACGATTTGAGCTACGGCAATATTGGCCACAAGCACAGAGCCATTGACATTAGGTTCGTTTCTCTTTCATTCTTGATTCACAGTTTTGTTTTGTTGTCTCATTGCATTTCTAGGGCTAGAGGCTTAGGGTTCATTGTTTTTTTCTGTAGTTCATGTAGACACTTATTCTACACCATTGGAATGAATCTTATTTTTTTTTTTGTATGAATCTTGTTTTCGCGATTTCCCGATGCATTATGTTGCCTCTGCATCATTCTTCGGGTTTGTGAACAGATAAGGGGTGAAGTGGTTTATAAGTTCCAGCGCTGTAGATTACATGAATATTTTCTCTCTCCCAGTATGATGTGACGCCAACCGATCACGTCTGAATAGATCTCATGATTTGTGGCAGTTGTAGTTATTATTGGTGTTAGGTATGGTAATTAGTTCGCCGTGTTAGCTTTGTTCGTTCTTATTAGAAAAATATCTATCCAGCTTATGTCAATGTCGTTTCTAACATTATGTTGGAATGGGCTAATTACGGGACTAAGGTTGATAACTGTAACGGTTGCCCTAATGGACTCTATAAATTTCACTGCAAAAATAGTAACTAGTGGAAGGGCCGCTTCTAAAATGACAACTCGTGGGATCATCAGTTGTAAACTGTGGCAATTATAAAGGTTTTGATATTAATAATTTAATGGTAATAATAGTGAAAGAAGTTGATGAAGCAATCTGGAATGTGAAATTTATTGGACGTTGTTTGTGGATGATCCACTACTGAGTTAATTCTTTGCTTGGTGATGTGTTGGTGATATTCACTGTTTACGAGCCATACTTGAAATTGCGAGAAGAATGTAGTTGAAGAATTGGATAATTATTCTTGGATGTTGGGGGGATGTGGTATTTACTTTGTTGGAATTATTGCTTTGTTGAATGGGATGAGCACTTGGTGTTTTCTGTTTGAAGGGAAGGAAAGAGTTTGGTTTGGATTCGTCGATATGAATTTGGGTGTGTGGTTGTTATGTGGACAGGGAGGAGGCAGCATTGGTGTAATATTTTGGTGGTGGTGATATTTTCACATTTCAGCGGGGATAAGTGTTGAAGAATAAGTTTGGAAATGAGTTCGGATAGCAGGAGTCGAAGCAGGAGCAGGAGCAGGAGCCCAGTGGCTCGTAAGATCCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATCACGTCGGGGTTTCAGGTTTATTATTCTGATAAATTATTTATTTCTCTCATATCTGATATGTAGGCTGGGGTAGAACCTGCAGATGTATGAGTTTTTTTAATGCAGTCATGTTATTTTTGCAATCTATTTCTGGCTGTGGAGCTATCTCCCCCCTGTTTAGATTGGGTATATTTCATTCAACCATCGATTAATATCTTCTCTTCTCAATTCATACACAGATACACATGCACACACATGGTCATGGAGTCATATCTCATGTTTTAAAGGAATTATATGTAACTATTGCATGATTGTGCTATGCTGGTTCTAAACGTTTGTCATTGATCAAGTTGACAAATCTCTGCATTAATCATGCTTGAGCAGACATGGAAGTCTCCTATACAGCTGCAATGGATATAATATCCATGTTATACTAATTGTATTGTAGTAGTATTTGATGCTGATGTTTCTGTTTTTGGCATGATTATTTGTATGAAAAAACGTTGTGGTTTTATCATGGTTTAGTTTTGTTATTTGTGAGATGAGCTTTCAAGGGTGAAATTCATATTGCAACTTTTCTATTAATGGTTTGTTATAAGATTATAAACTGCTTTCTTCATGGATCCTTTTGTTCCGGCTATGAGCTGGTGGGAAAAGCTGAAAACTTGGGGATGTTTTACTGTTCAAGGTCAGAGTCGAGTATTGATTAGTTAGGATAATGTCTGCGTGTTGACTGTGTGTTCATCAATGTAAATGGGAACACTTTTGACTTGTTTACTCCCTAAAACTCCATTTCATATATATATATATATATATGGGGGAGTTACTATTGTGGAGGGAGCTTATAATGTTGTGGGTGAACCTTTCTTTTTAATTTCTTCATTATGTTTATCTTTCATTTTCTCCTTGTTTGACATGAAGCTGTAATCTTAATCTGATTTTGTCTCCAGTCGAGACAATCTTTGCAAGAACTGCAAACGTCCTGGCCACTTTGCAAGAGAATGCCCTAATGTGGCAATTTGTCACAACTGTGGTCTCCCTGGGTAAGGGAACTTGATCTTATGCTTATTGCCTTTGCCGCTTATTTGGATACATTTTATTGTGAGAATCTTCGTTTTGTACTAAACTAAGGGCTTGTTTGGATTACTCTCCAGTTTAAGCACGGTTTTAAAAACTATATTCAATGTAATGTTTGTTTATTTATTTATTATTATTATTTTTTTTTTTGCATTCTGTTAATTAGAAATGTGTTTTTTTGCTACATATTTTGTAGATTTTCCTTTAATCATTTATAAAACAGTTTTGGACAATCTATCTACGGTGTTTCTTCAATCTATCTTTAAATTGTTCCAACTTTTTAAGTGATTGTTATTTATTATGTGATTGTGATTGTGATTGTTTTAGAAATGCCTCAACTTTTTTTAAGTGATTGTGATGATATAAAATCAAACAATAAGCTATGCTTGACATGTTTAAAATGATTACTTTTCAAAGGTACTTAAAGAATAGTTGAGTTAATCCAAATATACGTTAAATATTCACGATTCTACTTATTTTCTGGCATTGCAAATGGTGGGTTGTTATTTTCAATTCTACTTGACATTAAATTTACGGATTTGGTCCCATGCTATCATGCCATTGGCGTGGAGTATTCAATCTTTGTAGCCTCTAATCAACAGTTTCACCAATCTTAATTCAGAATTTGAGATTTGAAGTTGACTCGTTGGGAGATACAATTGAAGCAGTTGTTCTGTCATTGAATCTAATTATAGTTTGCTTACATTTGATAGAACAATGACACTCGTTTATGTTTATAGCTTACTTTTCTATGTATAAATTTGTGATACTGCATCTAGGCATATTGCTTCAGAGTGTACAACAAAGTCACTATGCTGGAATTGTCGTGAACCTGGTCATGTTGCAAGTAGCTGTTCAAATGAAGGTATCTGCCACACCTGCGGGAAGGCAGGACATCGAGCCAGGGAATGCACAGCTCCTCCGCTGCCACCCGGGGACTTGAGGCTTTGCAACAATTGCTACAAGCAGGGTCATATAGCAGCTGATTGTACTAATGAAAAGGCATGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGCGATTGTCCAAATGACCCTATTTGCAACCTGTGCAATGTATCTGGGCACGTAGCCAGACAGTGTCCGAAATCCAATGTTCTCGGAGAACGGGGAGACCGAGGCATCGGCAGTGGCGGTGGCAGTATACGTGGTGGTGGTGGTGGTGGTTACCGGGATGTTGTGTGCAGGACCTGCCAGCAGCTTGGCCATATGAGTAGAGATTGCATGAGCCCTTTGATGATTTGCCATAACTGTGGGGGACGTGGTCACCTAGCATACGAATGCCCATCGGGTCGGTTTATGGAGCGTTATCCCAGGAGGTACTGAAGACGTGATTAGAAGGAGGCCTTCGGATTTTGCTTCGAGTTTAGACATTTTGGGTACTAAACTCTATAGATTGCTCTGCTCTGCTTGCTGCTTACATGGTGGTAGTATTTGCTCATGTTGTTACCAAACATTGTTTTGTGGGTTAGACCATGAATTTTTAGTATTGTTTATCTTGCTTCTTCTATATATAATAAGACTTCCTTTCAATGATTCATCAGTTTAGTTTGTTCATTTCACCCTTAACGAAATTTCCTTGTAAAGTATGAACTTTGACTCGCTTGTTATCAACGACGTTGTGAGTTGTGCTCATATCGGGTTATTCGACCTA

mRNA sequence

CAAATCTTCGTTCTCGAGCGGCTGTTCTTCCGCGAATCGTCTCTCAGTTGCAGCTTCGTTCGTAATTTAACATCTTCAACGATTTGAGCTACGGCAATATTGGCCACAAGCACAGAGCCATTGACATTAGATAAGGGGTGAAGTGGTTTATAAGTTCCAGCGCTGTAGATTACATGAATATTTTCTCTCTCCCAGTATGATGTGACGCCAACCGATCACGTCTGAATAGATCTCATGATTTGTGGCAGTTGTAGTTATTATTGGTGTTAGGTATGGTAATTAGTTCGCCGTGTTAGCTTTGTTCGTTCTTATTAGAAAAATATCTATCCAGCTTATGTCAATGTCGTTTCTAACATTATGTTGGAATGGGCTAATTACGGGACTAAGGTTGATAACTGTAACGGTTGCCCTAATGGACTCTATAAATTTCACTGCAAAAATAGTAACTAGTGGAAGGGCCGCTTCTAAAATGACAACTCGTGGGATCATCAGTTGTAAACTGTGGCAATTATAAAGGTTTTGATATTAATAATTTAATGGTAATAATAGTGAAAGAAGTTGATGAAGCAATCTGGAATGTGAAATTTATTGGACGTTGTTTGTGGATGATCCACTACTGAGTTAATTCTTTGCTTGGTGATGTGTTGGTGATATTCACTGTTTACGAGCCATACTTGAAATTGCGAGAAGAATGTAGTTGAAGAATTGGATAATTATTCTTGGATGTTGGGGGGATGTGGTATTTACTTTGTTGGAATTATTGCTTTGTTGAATGGGATGAGCACTTGGTGTTTTCTGTTTGAAGGGAAGGAAAGAGTTTGGTTTGGATTCGTCGATATGAATTTGGGTGTGTGGTTGTTATGTGGACAGGGAGGAGGCAGCATTGGTGTAATATTTTGGTGGTGGTGATATTTTCACATTTCAGCGGGGATAAGTGTTGAAGAATAAGTTTGGAAATGAGTTCGGATAGCAGGAGTCGAAGCAGGAGCAGGAGCAGGAGCCCAGTGGCTCGTAAGATCCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATCACGTCGGGGTTTCAGTCGAGACAATCTTTGCAAGAACTGCAAACGTCCTGGCCACTTTGCAAGAGAATGCCCTAATGTGGCAATTTGTCACAACTGTGGTCTCCCTGGGCATATTGCTTCAGAGTGTACAACAAAGTCACTATGCTGGAATTGTCGTGAACCTGGTCATGTTGCAAGTAGCTGTTCAAATGAAGGTATCTGCCACACCTGCGGGAAGGCAGGACATCGAGCCAGGGAATGCACAGCTCCTCCGCTGCCACCCGGGGACTTGAGGCTTTGCAACAATTGCTACAAGCAGGGTCATATAGCAGCTGATTGTACTAATGAAAAGGCATGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGCGATTGTCCAAATGACCCTATTTGCAACCTGTGCAATGTATCTGGGCACGTAGCCAGACAGTGTCCGAAATCCAATGTTCTCGGAGAACGGGGAGACCGAGGCATCGGCAGTGGCGGTGGCAGTATACGTGGTGGTGGTGGTGGTGGTTACCGGGATGTTGTGTGCAGGACCTGCCAGCAGCTTGGCCATATGAGTAGAGATTGCATGAGCCCTTTGATGATTTGCCATAACTGTGGGGGACGTGGTCACCTAGCATACGAATGCCCATCGGGTCGGTTTATGGAGCGTTATCCCAGGAGGTACTGAAGACGTGATTAGAAGGAGGCCTTCGGATTTTGCTTCGAGTTTAGACATTTTGGGTACTAAACTCTATAGATTGCTCTGCTCTGCTTGCTGCTTACATGGTGGTAGTATTTGCTCATGTTGTTACCAAACATTGTTTTGTGGGTTAGACCATGAATTTTTAGTATTGTTTATCTTGCTTCTTCTATATATAATAAGACTTCCTTTCAATGATTCATCAGTTTAGTTTGTTCATTTCACCCTTAACGAAATTTCCTTGTAAAGTATGAACTTTGACTCGCTTGTTATCAACGACGTTGTGAGTTGTGCTCATATCGGGTTATTCGACCTA

Coding sequence (CDS)

ATGAGTTCGGATAGCAGGAGTCGAAGCAGGAGCAGGAGCAGGAGCCCAGTGGCTCGTAAGATCCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATCACGTCGGGGTTTCAGTCGAGACAATCTTTGCAAGAACTGCAAACGTCCTGGCCACTTTGCAAGAGAATGCCCTAATGTGGCAATTTGTCACAACTGTGGTCTCCCTGGGCATATTGCTTCAGAGTGTACAACAAAGTCACTATGCTGGAATTGTCGTGAACCTGGTCATGTTGCAAGTAGCTGTTCAAATGAAGGTATCTGCCACACCTGCGGGAAGGCAGGACATCGAGCCAGGGAATGCACAGCTCCTCCGCTGCCACCCGGGGACTTGAGGCTTTGCAACAATTGCTACAAGCAGGGTCATATAGCAGCTGATTGTACTAATGAAAAGGCATGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGCGATTGTCCAAATGACCCTATTTGCAACCTGTGCAATGTATCTGGGCACGTAGCCAGACAGTGTCCGAAATCCAATGTTCTCGGAGAACGGGGAGACCGAGGCATCGGCAGTGGCGGTGGCAGTATACGTGGTGGTGGTGGTGGTGGTTACCGGGATGTTGTGTGCAGGACCTGCCAGCAGCTTGGCCATATGAGTAGAGATTGCATGAGCCCTTTGATGATTTGCCATAACTGTGGGGGACGTGGTCACCTAGCATACGAATGCCCATCGGGTCGGTTTATGGAGCGTTATCCCAGGAGGTACTGA

Protein sequence

MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGGRGHLAYECPSGRFMERYPRRY

Homology

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BLAST of CmoCh11G010990 vs. ExPASy Swiss-Prot
Match: P53849 (Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GIS2 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.8e-25
Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 0


Query: 47  CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTK-----SLCWNCREPGHVASSCSNE 106
           C  C + GH A +C +  +C+NC  PGH+ ++CT         C+NC E GHV S C+ +
Sbjct: 6   CYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQ 65

Query: 107 GICHTCGKAGHRARECTAPPLPPGDLRL-CNNCYKQGHIAADCTNEKA-----CNNCRKT 166
             C  C + GH +REC  P       ++ C  C    H+A DC  E       C  C + 
Sbjct: 66  R-CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISGLKCYTCGQA 125

Query: 167 GHLARDCPNDPICNLCNVSGHVARQCPKS 185
           GH++RDC ND +C  CN +GH+++ CPK+
Sbjct: 126 GHMSRDCQNDRLCYNCNETGHISKDCPKA 153

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BLAST of CmoCh11G010990 vs. ExPASy Swiss-Prot
Match: Q3T0Q6 (Cellular nucleic acid-binding protein OS=Bos taurus OX=9913 GN=CNBP PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.0e-22
Identity = 61/167 (36.53%), Postives = 80/167 (47.90%), Query Frame = 0


Query: 45  NLCKNCKRPGHFARECPNVA----------------------ICHNCGLPGHIASEC-TT 104
           N C  C R GH+ARECP                         IC+ CG  GH+A +C   
Sbjct: 4   NECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQ 63

Query: 105 KSLCWNCREPGHVASSC-----SNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQ 164
           +  C+NC   GH+A  C       E  C+ CGK GH AR+C        D + C +C + 
Sbjct: 64  EDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC-----DHADEQKCYSCGEF 123

Query: 165 GHIAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC 182
           GHI  DCT  K C  C +TGH+A +C   ++  C  C  SGH+AR+C
Sbjct: 124 GHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164

[Close]

BLAST of CmoCh11G010990 vs. ExPASy Swiss-Prot
Match: P36627 (Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=byr3 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.1e-22
Identity = 63/190 (33.16%), Postives = 82/190 (43.16%), Query Frame = 0


Query: 66  CHNCGLPGHIASECTTKSLCWNCREPGHVASSCS---NEGICHTCGKAGHRARECTAPPL 125
           C+NCG  GH A ECT  S+C+NC + GH AS C+    E  C+ CG AGH  R+C + P 
Sbjct: 19  CYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPN 78

Query: 126 PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCP 185
           P      C  C + GHIA DC      +  R  GH      ++  C  C   GH AR C 
Sbjct: 79  PRQGAE-CYKCGRVGHIARDCRTNGQQSGGRFGGH-----RSNMNCYACGSYGHQARDCT 138

Query: 186 KSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCM--SPLMICHNCGG 245
                                         V C +C ++GH S +C   S   +C+ C  
Sbjct: 139 MG----------------------------VKCYSCGKIGHRSFECQQASDGQLCYKCNQ 174

Query: 246 RGHLAYECPS 251
            GH+A  C S
Sbjct: 199 PGHIAVNCTS 174

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BLAST of CmoCh11G010990 vs. ExPASy Swiss-Prot
Match: O42395 (Cellular nucleic acid-binding protein OS=Gallus gallus OX=9031 GN=CNBP PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-21
Identity = 61/169 (36.09%), Postives = 80/169 (47.34%), Query Frame = 0


Query: 45  NLCKNCKRPGHFARECPN-----------------------VAICHNCGLPGHIASECTT 104
           N C  C R GH+ARECP                          IC+ CG  GH+A +C  
Sbjct: 4   NECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDL 63

Query: 105 K--SLCWNCREPGHVASSC-----SNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCY 164
           +    C+NC   GH+A  C       E  C+ CGK GH AR+C        D + C +C 
Sbjct: 64  QEDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC-----DHADEQKCYSCG 123

Query: 165 KQGHIAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC 182
           + GHI  DCT  K C  C +TGH+A +C   ++  C  C  SGH+AR+C
Sbjct: 124 EFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166

[Close]

BLAST of CmoCh11G010990 vs. ExPASy Swiss-Prot
Match: P62633 (Cellular nucleic acid-binding protein OS=Homo sapiens OX=9606 GN=CNBP PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.5e-21
Identity = 61/174 (35.06%), Postives = 80/174 (45.98%), Query Frame = 0


Query: 45  NLCKNCKRPGHFARECPNVA-----------------------------ICHNCGLPGHI 104
           N C  C R GH+ARECP                                IC+ CG  GH+
Sbjct: 4   NECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHL 63

Query: 105 ASEC-TTKSLCWNCREPGHVASSC-----SNEGICHTCGKAGHRARECTAPPLPPGDLRL 164
           A +C   +  C+NC   GH+A  C       E  C+ CGK GH AR+C        D + 
Sbjct: 64  AKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC-----DHADEQK 123

Query: 165 CNNCYKQGHIAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC 182
           C +C + GHI  DCT  K C  C +TGH+A +C   ++  C  C  SGH+AR+C
Sbjct: 124 CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171

[Close]

BLAST of CmoCh11G010990 vs. ExPASy TrEMBL
Match: A0A6J1EYM8 (zinc finger protein GIS2-like OS=Cucurbita moschata OX=3662 GN=LOC111440407 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 5.0e-156
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60
           MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC
Sbjct: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60

Query: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120
           PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP
Sbjct: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120

Query: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180
           PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ
Sbjct: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180

Query: 181 CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240
           CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG
Sbjct: 181 CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240

Query: 241 RGHLAYECPSGRFMERYPRRY 262
           RGHLAYECPSGRFMERYPRRY
Sbjct: 241 RGHLAYECPSGRFMERYPRRY 261

[Close]

BLAST of CmoCh11G010990 vs. ExPASy TrEMBL
Match: A0A6J1I6P4 (zinc finger protein GIS2-like OS=Cucurbita maxima OX=3661 GN=LOC111470120 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 7.9e-154
Identity = 259/261 (99.23%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60
           MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC
Sbjct: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60

Query: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120
           PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP
Sbjct: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120

Query: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180
           PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ
Sbjct: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180

Query: 181 CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240
           CPKSNVLG+RGDRGIGSGGGSIR GGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG
Sbjct: 181 CPKSNVLGDRGDRGIGSGGGSIR-GGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240

Query: 241 RGHLAYECPSGRFMERYPRRY 262
           RGHLAYECPSGRFMERYPRRY
Sbjct: 241 RGHLAYECPSGRFMERYPRRY 260

[Close]

BLAST of CmoCh11G010990 vs. ExPASy TrEMBL
Match: A0A6J1C2F8 (zinc finger protein GIS2 OS=Momordica charantia OX=3673 GN=LOC111007845 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 2.6e-149
Identity = 247/261 (94.64%), Postives = 254/261 (97.32%), Query Frame = 0


Query: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60
           MSSDSRSRSRSRSRSP+ RKIRSDRF+YRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC
Sbjct: 1   MSSDSRSRSRSRSRSPLDRKIRSDRFAYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60

Query: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120
           PNVAICHNCGLPGHIASECTTKSLCWNCREPGH+A+SC NEGICHTCGKAGHRARECTAP
Sbjct: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTAP 120

Query: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180
           PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ
Sbjct: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180

Query: 181 CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240
           CPKSN+L +R DRGIGSGGGS+RGG GGGYRDVVCR CQQLGHMSRDCM PLMICHNCGG
Sbjct: 181 CPKSNILSDRVDRGIGSGGGSVRGGSGGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGG 240

Query: 241 RGHLAYECPSGRFMERYPRRY 262
           RGHLAYECPSGRFMERYPRRY
Sbjct: 241 RGHLAYECPSGRFMERYPRRY 261

[Close]

BLAST of CmoCh11G010990 vs. ExPASy TrEMBL
Match: A0A1S3BIU7 (zinc finger protein GIS2 OS=Cucumis melo OX=3656 GN=LOC103490347 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.2e-147
Identity = 247/261 (94.64%), Postives = 252/261 (96.55%), Query Frame = 0


Query: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60
           MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC
Sbjct: 1   MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60

Query: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120
           PNVAICHNCGLPGHIASECTTKSLCWNCREPGH+ASSC NEGICHTCGKAGHRAR+CTAP
Sbjct: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARDCTAP 120

Query: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180
           PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ
Sbjct: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180

Query: 181 CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240
           CPKSNVLG+RGDRGI SGGGS R G G GYRDVVCR CQQLGHMSRDCM PLMICHNCGG
Sbjct: 181 CPKSNVLGDRGDRGISSGGGSGR-GSGSGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGG 240

Query: 241 RGHLAYECPSGRFMERYPRRY 262
           RGHLAYECPSGRFM+RYPRRY
Sbjct: 241 RGHLAYECPSGRFMDRYPRRY 260

[Close]

BLAST of CmoCh11G010990 vs. ExPASy TrEMBL
Match: A0A0A0K138 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G006230 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146
Identity = 245/261 (93.87%), Postives = 252/261 (96.55%), Query Frame = 0


Query: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60
           MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC
Sbjct: 1   MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60

Query: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120
           PNVAICHNCGLPGHIASECTTKSLCWNCREPGH+ASSC NEGICHTCGKAGHRAR+CTAP
Sbjct: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARDCTAP 120

Query: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180
           P+PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ
Sbjct: 121 PMPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180

Query: 181 CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240
           CPKSNVLG+RGDRGI SGGGS R G G GYRDVVCR CQQLGHMSRDCM PLMICHNCGG
Sbjct: 181 CPKSNVLGDRGDRGISSGGGSGR-GSGSGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGG 240

Query: 241 RGHLAYECPSGRFMERYPRRY 262
           RGHLAYECPSGRFM+R+PRRY
Sbjct: 241 RGHLAYECPSGRFMDRFPRRY 260

[Close]

BLAST of CmoCh11G010990 vs. NCBI nr
Match: XP_022933286.1 (zinc finger protein GIS2-like [Cucurbita moschata])

HSP 1 Score: 560.1 bits (1442), Expect = 1.0e-155
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60
           MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC
Sbjct: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60

Query: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120
           PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP
Sbjct: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120

Query: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180
           PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ
Sbjct: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180

Query: 181 CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240
           CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG
Sbjct: 181 CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240

Query: 241 RGHLAYECPSGRFMERYPRRY 262
           RGHLAYECPSGRFMERYPRRY
Sbjct: 241 RGHLAYECPSGRFMERYPRRY 261

[Close]

BLAST of CmoCh11G010990 vs. NCBI nr
Match: KAG6588419.1 (hypothetical protein SDJN03_16984, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 555.1 bits (1429), Expect = 3.3e-154
Identity = 261/263 (99.24%), Postives = 261/263 (99.24%), Query Frame = 0


Query: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60
           MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC
Sbjct: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60

Query: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120
           PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP
Sbjct: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120

Query: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180
           PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ
Sbjct: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180

Query: 181 CPKSNVLGERGDRGI--GSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNC 240
           CPKSNVLGERGDRGI  GSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNC
Sbjct: 181 CPKSNVLGERGDRGIGSGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNC 240

Query: 241 GGRGHLAYECPSGRFMERYPRRY 262
           GGRGHLAYECPSGRFMERYPRRY
Sbjct: 241 GGRGHLAYECPSGRFMERYPRRY 263

[Close]

BLAST of CmoCh11G010990 vs. NCBI nr
Match: XP_023531028.1 (zinc finger protein GIS2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 553.1 bits (1424), Expect = 1.3e-153
Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60
           MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC
Sbjct: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60

Query: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120
           PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP
Sbjct: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120

Query: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180
           PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ
Sbjct: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180

Query: 181 CPKSNVLGERGDRGIGSGGGSIR----GGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICH 240
           CPKSNVLG+RGDRGIGSGGGSIR    GGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICH
Sbjct: 181 CPKSNVLGDRGDRGIGSGGGSIRGGGGGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICH 240

Query: 241 NCGGRGHLAYECPSGRFMERYPRRY 262
           NCGGRGHLAYECPSGRFMERYPRRY
Sbjct: 241 NCGGRGHLAYECPSGRFMERYPRRY 265

[Close]

BLAST of CmoCh11G010990 vs. NCBI nr
Match: XP_022971383.1 (zinc finger protein GIS2-like [Cucurbita maxima])

HSP 1 Score: 552.7 bits (1423), Expect = 1.6e-153
Identity = 259/261 (99.23%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60
           MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC
Sbjct: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60

Query: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120
           PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP
Sbjct: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120

Query: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180
           PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ
Sbjct: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180

Query: 181 CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240
           CPKSNVLG+RGDRGIGSGGGSIR GGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG
Sbjct: 181 CPKSNVLGDRGDRGIGSGGGSIR-GGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240

Query: 241 RGHLAYECPSGRFMERYPRRY 262
           RGHLAYECPSGRFMERYPRRY
Sbjct: 241 RGHLAYECPSGRFMERYPRRY 260

[Close]

BLAST of CmoCh11G010990 vs. NCBI nr
Match: XP_022136056.1 (zinc finger protein GIS2 [Momordica charantia])

HSP 1 Score: 537.7 bits (1384), Expect = 5.5e-149
Identity = 247/261 (94.64%), Postives = 254/261 (97.32%), Query Frame = 0


Query: 1   MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60
           MSSDSRSRSRSRSRSP+ RKIRSDRF+YRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC
Sbjct: 1   MSSDSRSRSRSRSRSPLDRKIRSDRFAYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC 60

Query: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 120
           PNVAICHNCGLPGHIASECTTKSLCWNCREPGH+A+SC NEGICHTCGKAGHRARECTAP
Sbjct: 61  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTAP 120

Query: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180
           PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ
Sbjct: 121 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 180

Query: 181 CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGG 240
           CPKSN+L +R DRGIGSGGGS+RGG GGGYRDVVCR CQQLGHMSRDCM PLMICHNCGG
Sbjct: 181 CPKSNILSDRVDRGIGSGGGSVRGGSGGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGG 240

Query: 241 RGHLAYECPSGRFMERYPRRY 262
           RGHLAYECPSGRFMERYPRRY
Sbjct: 241 RGHLAYECPSGRFMERYPRRY 261

[Close]

BLAST of CmoCh11G010990 vs. TAIR 10
Match: AT1G75560.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 334.7 bits (857), Expect = 6.5e-92
Identity = 167/265 (63.02%), Postives = 196/265 (73.96%), Query Frame = 0


Query: 3   SDSRSRSRSRSRSPVARKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFAREC 62
           S SRSR R RSRSP  R++RS+R SY DAP R  RE RR FS+ NLC NCKRPGHFAR+C
Sbjct: 11  SRSRSRDRFRSRSPRDRRMRSERVSYHDAPSRREREPRRAFSQGNLCNNCKRPGHFARDC 70

Query: 63  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 122
            NV++C+NCGLPGHIA+ECT +S CWNCREPGHVAS+CSNEGICH+CGK+GHRAR+C+  
Sbjct: 71  SNVSVCNNCGLPGHIAAECTAESRCWNCREPGHVASNCSNEGICHSCGKSGHRARDCSNS 130

Query: 123 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 182
               GDLRLCNNC+KQGH+AADCTN+KAC NCR +GH+ARDC NDP+CN+C++SGHVAR 
Sbjct: 131 DSRAGDLRLCNNCFKQGHLAADCTNDKACKNCRTSGHIARDCRNDPVCNICSISGHVARH 190

Query: 183 CPKSNVLGERGDRGIGSGGGSIRGGG--GGGYRDVVCRTCQQLGHMSRD--CMSPLMICH 242
           CPK       GD      G  +R GG   GG           L  MSRD   +S ++ICH
Sbjct: 191 CPK-------GDSNYSDRGSRVRDGGMQRGG-----------LSRMSRDREGVSAMIICH 250

Query: 243 NCGGRGHLAYECPSGRFMERYPRRY 262
           NCGGRGH AYECPS R  +R  RRY
Sbjct: 251 NCGGRGHRAYECPSARVADRGFRRY 257

[Close]

BLAST of CmoCh11G010990 vs. TAIR 10
Match: AT1G75560.2 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 334.7 bits (857), Expect = 6.5e-92
Identity = 167/265 (63.02%), Postives = 196/265 (73.96%), Query Frame = 0


Query: 3   SDSRSRSRSRSRSPVARKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFAREC 62
           S SRSR R RSRSP  R++RS+R SY DAP R  RE RR FS+ NLC NCKRPGHFAR+C
Sbjct: 11  SRSRSRDRFRSRSPRDRRMRSERVSYHDAPSRREREPRRAFSQGNLCNNCKRPGHFARDC 70

Query: 63  PNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAP 122
            NV++C+NCGLPGHIA+ECT +S CWNCREPGHVAS+CSNEGICH+CGK+GHRAR+C+  
Sbjct: 71  SNVSVCNNCGLPGHIAAECTAESRCWNCREPGHVASNCSNEGICHSCGKSGHRARDCSNS 130

Query: 123 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 182
               GDLRLCNNC+KQGH+AADCTN+KAC NCR +GH+ARDC NDP+CN+C++SGHVAR 
Sbjct: 131 DSRAGDLRLCNNCFKQGHLAADCTNDKACKNCRTSGHIARDCRNDPVCNICSISGHVARH 190

Query: 183 CPKSNVLGERGDRGIGSGGGSIRGGG--GGGYRDVVCRTCQQLGHMSRD--CMSPLMICH 242
           CPK       GD      G  +R GG   GG           L  MSRD   +S ++ICH
Sbjct: 191 CPK-------GDSNYSDRGSRVRDGGMQRGG-----------LSRMSRDREGVSAMIICH 250

Query: 243 NCGGRGHLAYECPSGRFMERYPRRY 262
           NCGGRGH AYECPS R  +R  RRY
Sbjct: 251 NCGGRGHRAYECPSARVADRGFRRY 257

[Close]

BLAST of CmoCh11G010990 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 95.1 bits (235), Expect = 8.7e-20
Identity = 73/237 (30.80%), Postives = 94/237 (39.66%), Query Frame = 0


Query: 45  NLCKNCKRPGHFARECPNVAICHNCGLPGHIASEC-------------TTKSLCWNCREP 104
           +L K     G+ AR     + C+NCG  GHI+ +C                  C+NC + 
Sbjct: 81  SLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDT 140

Query: 105 GHVASSCSNEGI-------------CHTCGKAGHRARECTAPPLPPGDLR--------LC 164
           GH A  C++ G              C+TCG  GH AR+CT   +  GD R         C
Sbjct: 141 GHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGC 200

Query: 165 NNCYKQGHIAADCTNEKA-------------CNNCRKTGHLARDCPN----DPICNLCNV 224
             C   GH A DCT + A             C +C   GH+ARDC         C  C  
Sbjct: 201 YTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSRGCYQCGG 260

Query: 225 SGHVARQCPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMS 231
           SGH+AR C +                   RG GGGG  D  C  C + GH +R+C S
Sbjct: 261 SGHLARDCDQ-------------------RGSGGGG-NDNACYKCGKEGHFARECSS 297

[Close]

BLAST of CmoCh11G010990 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 82.0 bits (201), Expect = 7.6e-16
Identity = 63/196 (32.14%), Postives = 82/196 (41.84%), Query Frame = 0


Query: 66  CHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTA-----P 125
           C NCG  GH+A +C   S        G        EG C+ CG  GH AR+C        
Sbjct: 96  CFNCGEVGHMAKDCDGGS--GGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGGNS 155

Query: 126 PLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQ 185
               G  R C +C + GH+A DC      N  R  G   R    D  C +C   GH AR 
Sbjct: 156 GGGGGGGRPCYSCGEVGHLAKDCRGGSGGN--RYGGGGGRGSGGDG-CYMCGGVGHFARD 215

Query: 186 CPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDCMSPL-------- 245
           C +             +GGG++ GGG        C TC  +GH+++ C S +        
Sbjct: 216 CRQ-------------NGGGNVGGGGS------TCYTCGGVGHIAKVCTSKIPSGGGGGG 267

Query: 246 MICHNCGGRGHLAYEC 249
             C+ CGG GHLA +C
Sbjct: 276 RACYECGGTGHLARDC 267

[Close]

BLAST of CmoCh11G010990 vs. TAIR 10
Match: AT3G43590.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 70.1 bits (170), Expect = 3.0e-12
Identity = 57/222 (25.68%), Postives = 80/222 (36.04%), Query Frame = 0


Query: 66  CHNCGLPGHIASECTT----KSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAPP 125
           C++CG  GH +  C T    +  C+ C    H A  CS    C+ C K GHRA++C    
Sbjct: 168 CYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCPDKY 227

Query: 126 LPPGDLRLCNNCYKQGHIAADCTNEKA--------CNNCRKTGHLARDCPNDPI-----C 185
                  +C  C   GH    C  E +        C  C+  GHL    P + +     C
Sbjct: 228 KNGSKGAVCLRCGDFGHDMILCKYEYSKEDLKDVQCYICKSFGHLCCVEPGNSLSWAVSC 287

Query: 186 NLCNVSGHVARQCPKSNVLGERGDRGIGSGGGSIRGGGGGGYRDVVCRTCQQLGHMSRDC 245
             C   GH    C +        D        + R           C  C + GH +R+C
Sbjct: 288 YRCGQLGHSGLACGRHYEESNENDSATPERLFNSREAS-------ECYRCGEEGHFAREC 347

Query: 246 MSPLMI-----------CHNCGGRGHLAYECPSGRFMERYPR 260
            +   I           C+ C G GH A ECP+   + +  R
Sbjct: 348 PNSSSISTSHGRESQTLCYRCNGSGHFARECPNSSQVSKRDR 382

The following BLAST results are available for this feature:

BLAST of CmoCh11G010990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P53849	1.8e-25	36.91	Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...	[more]
Q3T0Q6	7.0e-22	36.53	Cellular nucleic acid-binding protein OS=Bos taurus OX=9913 GN=CNBP PE=2 SV=1	[more]
P36627	9.1e-22	33.16	Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe (stra...	[more]
O42395	1.5e-21	36.09	Cellular nucleic acid-binding protein OS=Gallus gallus OX=9031 GN=CNBP PE=2 SV=1	[more]
P62633	4.5e-21	35.06	Cellular nucleic acid-binding protein OS=Homo sapiens OX=9606 GN=CNBP PE=1 SV=1	[more]

BLAST of CmoCh11G010990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYM8	5.0e-156	100.00	zinc finger protein GIS2-like OS=Cucurbita moschata OX=3662 GN=LOC111440407 PE=4...	[more]
A0A6J1I6P4	7.9e-154	99.23	zinc finger protein GIS2-like OS=Cucurbita maxima OX=3661 GN=LOC111470120 PE=4 S...	[more]
A0A6J1C2F8	2.6e-149	94.64	zinc finger protein GIS2 OS=Momordica charantia OX=3673 GN=LOC111007845 PE=4 SV=...	[more]
A0A1S3BIU7	4.2e-147	94.64	zinc finger protein GIS2 OS=Cucumis melo OX=3656 GN=LOC103490347 PE=4 SV=1	[more]
A0A0A0K138	2.1e-146	93.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G006230 PE=4 SV=1	[more]

BLAST of CmoCh11G010990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933286.1	1.0e-155	100.00	zinc finger protein GIS2-like [Cucurbita moschata]	[more]
KAG6588419.1	3.3e-154	99.24	hypothetical protein SDJN03_16984, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023531028.1	1.3e-153	98.11	zinc finger protein GIS2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971383.1	1.6e-153	99.23	zinc finger protein GIS2-like [Cucurbita maxima]	[more]
XP_022136056.1	5.5e-149	94.64	zinc finger protein GIS2 [Momordica charantia]	[more]

BLAST of CmoCh11G010990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75560.1	6.5e-92	63.02	zinc knuckle (CCHC-type) family protein	[more]
AT1G75560.2	6.5e-92	63.02	zinc knuckle (CCHC-type) family protein	[more]
AT4G36020.1	8.7e-20	30.80	cold shock domain protein 1	[more]
AT2G17870.1	7.6e-16	32.14	cold shock domain protein 3	[more]
AT3G43590.1	3.0e-12	25.68	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 234..250 e-value: 0.001 score: 28.3 coord: 46..62 e-value: 4.7E-4 score: 29.5 coord: 65..81 e-value: 0.0017 score: 27.6 coord: 167..183 e-value: 0.02 score: 21.7 coord: 103..119 e-value: 0.0033 score: 26.6 coord: 129..145 e-value: 0.0078 score: 24.2 coord: 214..230 e-value: 0.0056 score: 25.1 coord: 148..164 e-value: 1.4E-4 score: 31.2 coord: 84..100 e-value: 0.0051 score: 25.4
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 148..164 e-value: 3.0E-6 score: 27.1 coord: 214..229 e-value: 2.8E-6 score: 27.2 coord: 66..80 e-value: 2.3E-5 score: 24.2 coord: 103..118 e-value: 2.5E-5 score: 24.2 coord: 234..250 e-value: 1.7E-5 score: 24.7 coord: 85..99 e-value: 1.3E-4 score: 21.8 coord: 167..183 e-value: 0.0017 score: 18.4 coord: 129..145 e-value: 0.0034 score: 17.4 coord: 46..62 e-value: 3.2E-6 score: 27.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 168..183 score: 8.614303
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 215..228 score: 8.812096
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 104..117 score: 9.916444
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 149..164 score: 10.01534
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 130..145 score: 8.795613
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 47..62 score: 9.850513
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 235..250 score: 9.834029
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 85..100 score: 9.240648
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 66..79 score: 9.504374
None	No IPR available	GENE3D	4.10.60.10		coord: 209..252 e-value: 7.6E-11 score: 43.8
None	No IPR available	GENE3D	4.10.60.10		coord: 64..101 e-value: 1.4E-10 score: 43.0
None	No IPR available	GENE3D	4.10.60.10		coord: 102..146 e-value: 1.5E-10 score: 42.6 coord: 147..194 e-value: 8.0E-12 score: 46.7
None	No IPR available	GENE3D	4.10.60.10		coord: 34..63 e-value: 2.3E-5 score: 25.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR47103	FAMILY NOT NAMED	coord: 1..261
None	No IPR available	PANTHER	PTHR47103:SF6	OS10G0545300 PROTEIN	coord: 1..261
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 83..120
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 125..165
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 38..82
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 203..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G010990.1	CmoCh11G010990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding