CmoCh11G007060 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGTGAAATTGAAGTCGATGGTATCCTGGTCGAATATCTTTGGCAACAATTCATTTTGATTTCGATGTCTTTAACGTTTCGCGTTTTGTAATTCTATGGATCATCATTTTGCAGGCTCCGAAACCTGTTACGAGTCCCGTCCCCGAAGCCTGGTACCCAACCCTTGCGGTCTTGATGATCGCTGTTGGCCTTATCATTACTGCCTCGTTTTTCATGTAAGTTCTATTGGATCTGTCTCTCTGTTGCAAAATGAAATCTGGTTGATGTTAATTATTCAACGTGAAATGATTGGTTTTCCCCCTTTCTCGTTCTTTGCAAGTAGATCAGGGTTTGTTTAGTCTACTTCCAGGCATTTGTTACTTGCTTAATTCTCTTTGATTACAACGGAATTGTTAGAACATAATTAGTTGTGAAGTTTACAAGTTTCTGATCTTTGGTTCGGAAGTGTGGGAATTTTTTGATCCAATCAAGTACCATTATATTTTTGTACCATCCATAGTGAAATTGAGAAACATTGTGAAATTTAAGTTTGAATGCGTTGACATTCATCTATTTCCTTCAGAGATGTTCTTTAGTAGGCTTCAGGCTTTTCATCAAACTCACGGTGGGACTAATTTTCATTATCCAAGCCTTTGTTTATATCGTCCAGCAGAAGAAGGCCATTGGACCATCGATAGAAAAGTTCACCGTGCTCTCTTTCACAAGAATTCCTCCATTTAAGGACGTTCAACCTTTAAAAGTGAACAATGGAGGTTAATCCCCAACTCTAGGAAGGTAGACTCCAAACTACGAGTCCTTTGCTTGACGTAGAGGAAGATTTTTGTTGTTTTGGGGACAAGAAATTGTGAAGCTTTCCCCCTTCCGCTAAATTTATATTTCTGCCACACTATCAGACTTTTATTTCAAAAGAAAAATGGGGATAAGTACTCCCTTCCTTCAACAAAAGCGATCCTCCAGGAAGAGAATTTAGAGATGGATAGAATTAGTATCTCGATAGTTATCTTTTCCCTTCTTTGGTGATTCATCCAAGGGCGCTCTCCGCTACAGATTCCCCTTACGACTTAGAAATCGTCGAGAGGAGCTCCCTTTTCAAGCGACTTTCTAAAACTTTAGCTAGAATTTTATAAACACTGGTTATGAAACTAATAGGCCAAAAGTCCTTAACCTTGTTAGCATTCTCCTTCTCTGAATTAAGGCAGACAAACATTTCAGAGATAGAACTATTCAAGATTCCCTCTCAAATAGTTCCTTAAAAACTCCTCCTTCCAAGTCCCCTTTTAAAAAAGATCCCAATTGTTTTGGTAAAGGGCCATAAGAAAAACCATCAAGAACTAGTGACTTTGCCCTATCACTTCCGAAGACTTATTGGTTGATCTCCCCTAAAGTGAAAGGCGCTACCAAATCATCCTTTTCCCTTTCAGAGATAGGGCTCCAATCAATTCAAATAACAAAAGGTTTAGGAATCACTTTGAGATCGTAGAGATTAGAGAAGTAAAAGAGAGGACCTCTTCCTAAGCTTCCCGTTATCTTTAACTCAGGGCCCAAGTTCCTACTTAAGCCCCCTTGTGGAAGAAGGAAGTGTTGCAATCTCCTTCCTTTGCCCATTTAATCTTGGACTTTTGCCTCAAAGTACAAGTTTCTTTTCTGATCAGCTCTACAACTTCCTCTCGACTTTAAAAAATGCAACCAAATAACTGACTACTTCTGATGCTTTATAATGTAGTATGATTTGAGTGATGAGTAAAGAACCATTTCTCATGGACTGCGGGAAACTAATATGGTTATTAATATTCGTGTTTGGCAGTTTGATGATTTTATGTTTCTGTTTATTGTCACCCTTGACTTGATGGCGACGGACCGTACGCCATCACAGATGTTGTTTGTTGCTTTATGTAGTTGTAGCAGTATGCAAGCACGAATGCTTCTAATGGAGACTGACTATAATCTCTCTATTAAGATGATAAGCAATATAAGGAGAAAATTATTGAACTTGATTGATTGGGATTTGTAATTTGATCAAATTGATTTTTGCTGTCAAGATCTATAATACAACCAAGTTTCATAATTTTCTGTTATGGTAGAAGCCGGATGACATTTTCGTATCATTCCAATAGATCAAATGTTACTGTCATCTCGTTATGGAGTCTATCGTTTTGGGGTCGCTCTAACGATATCAGCTATCATTTGCAGCTATGAAGCTACAACTTCTAGGAAAAACCGTAGTCTGGCCACGGAACTTACGAGAGGAGCCGTTGCCTCAGTTTTCTTGGTATGAATCTCTCTGTAGATCTCTTTAATCGGTTATGCAGATTTTCTCCTACGCACTGTCAGTGAGAGGAGATTATCTTTGTTTTCAGATTGAGTATTGTACATCTCTGGTTAGTTATTGCCAAATTTGATGATGGAGCTTGATGTTGTATATTTACAGCTCTACGTTGTTGTCTGTTGCAGGGTTTTGGATCCTTGTTCTTGCTGCTTGCTTCTGGTGTTTATGTCTAACCTATTAGAAGAACATGTTGAGAACTTTTTTTATTTAGCGGACTCAGTTTTACATGTATGATGCTGGGCTAGGACTACTTCCGTAAAAACAGTGGTCTATTTTTCCAATGAGGAATGAATATTTTCGATATTTTCTTTTTTAGGATGGAGCATTATACTCATACAATGCATTATGATTGAAGGGATTTTGATTTTGCTGACTCGAAAATGGCAGTTTTATGAAGAAATCAGCTTTCCCCAGAATCAGAGTCATTGA ATGGTGAGTGAAATTGAAGTCGATGGTATCCTGGCTCCGAAACCTGTTACGAGTCCCGTCCCCGAAGCCTGGTACCCAACCCTTGCGGTCTTGATGATCGCTGTTGGCCTTATCATTACTGCCTCGTTTTTCATGCTTTTCATCAAACTCACGGTGGGACTAATTTTCATTATCCAAGCCTTTGTTTATATCGTCCAGCAGAAGAAGGCCATTGGACCATCGATAGAAAAGTTCACCGTGCTCTCTTTCACAAGAATTCCTCCATTTAAGGACGTTCAACCTTTAAAAGTGAACAATGGAGGATGGAGCATTATACTCATACAATGCATTATGATTGAAGGGATTTTGATTTTGCTGACTCGAAAATGGCAGTTTTATGAAGAAATCAGCTTTCCCCAGAATCAGAGTCATTGA ATGGTGAGTGAAATTGAAGTCGATGGTATCCTGGCTCCGAAACCTGTTACGAGTCCCGTCCCCGAAGCCTGGTACCCAACCCTTGCGGTCTTGATGATCGCTGTTGGCCTTATCATTACTGCCTCGTTTTTCATGCTTTTCATCAAACTCACGGTGGGACTAATTTTCATTATCCAAGCCTTTGTTTATATCGTCCAGCAGAAGAAGGCCATTGGACCATCGATAGAAAAGTTCACCGTGCTCTCTTTCACAAGAATTCCTCCATTTAAGGACGTTCAACCTTTAAAAGTGAACAATGGAGGATGGAGCATTATACTCATACAATGCATTATGATTGAAGGGATTTTGATTTTGCTGACTCGAAAATGGCAGTTTTATGAAGAAATCAGCTTTCCCCAGAATCAGAGTCATTGA MVSEIEVDGILAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFMLFIKLTVGLIFIIQAFVYIVQQKKAIGPSIEKFTVLSFTRIPPFKDVQPLKVNNGGWSIILIQCIMIEGILILLTRKWQFYEEISFPQNQSH Homology
BLAST of CmoCh11G007060 vs. ExPASy TrEMBL
Match: A0A6J1I0B1 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucurbita maxima OX=3661 GN=LOC111467831 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07 Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 0
BLAST of CmoCh11G007060 vs. ExPASy TrEMBL
Match: A0A6J1EJW7 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucurbita moschata OX=3662 GN=LOC111433278 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07 Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 0
BLAST of CmoCh11G007060 vs. ExPASy TrEMBL
Match: A0A6J1JK65 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucurbita maxima OX=3661 GN=LOC111485321 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.0e-07 Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 0
BLAST of CmoCh11G007060 vs. ExPASy TrEMBL
Match: A0A6J1HCT0 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucurbita moschata OX=3662 GN=LOC111461654 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.0e-07 Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 0
BLAST of CmoCh11G007060 vs. ExPASy TrEMBL
Match: A0A5D3CDN3 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002270 PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 4.5e-07 Identity = 31/35 (88.57%), Postives = 35/35 (100.00%), Query Frame = 0
BLAST of CmoCh11G007060 vs. NCBI nr
Match: KAG6588039.1 (hypothetical protein SDJN03_16604, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 66.2 bits (160), Expect = 2.4e-07 Identity = 33/36 (91.67%), Postives = 36/36 (100.00%), Query Frame = 0
BLAST of CmoCh11G007060 vs. NCBI nr
Match: XP_022926045.1 (transmembrane protein 258-like [Cucurbita moschata] >XP_022968664.1 transmembrane protein 258-like [Cucurbita maxima] >XP_023530318.1 transmembrane protein 258-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 65.9 bits (159), Expect = 3.2e-07 Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 0
BLAST of CmoCh11G007060 vs. NCBI nr
Match: KAG6589994.1 (Transmembrane protein 258, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 65.5 bits (158), Expect = 4.2e-07 Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 0
BLAST of CmoCh11G007060 vs. NCBI nr
Match: XP_022961024.1 (transmembrane protein 258 [Cucurbita moschata] >XP_022987919.1 transmembrane protein 258 [Cucurbita maxima] >XP_023515608.1 transmembrane protein 258 [Cucurbita pepo subsp. pepo] >KAG7023658.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 65.5 bits (158), Expect = 4.2e-07 Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 0
BLAST of CmoCh11G007060 vs. NCBI nr
Match: XP_038879770.1 (transmembrane protein 258 [Benincasa hispida]) HSP 1 Score: 64.7 bits (156), Expect = 7.1e-07 Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 0
BLAST of CmoCh11G007060 vs. TAIR 10
Match: AT4G29735.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0197 (InterPro:IPR007915); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.6e-04 Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of CmoCh11G007060 vs. TAIR 10
Match: AT4G29735.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0197 (InterPro:IPR007915); Has 190 Blast hits to 190 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 133; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04 Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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